ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf82j17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0308400:Os04g0308400 | 113 | 2e-25 | 2 | Os04g0310100:Os04g0310100 | 100 | 3e-21 | 3 | AK108905:Os04g0308500 | 100 | 3e-21 | 4 | Os04g0308300:Os04g0308300 | 35 | 0.079 | 5 | AK110434: | 32 | 0.88 | 6 | AK109755:Os03g0131500 | 30 | 2.0 | 7 | AK110364: | 30 | 3.3 | 8 | AK120222:Os07g0596300 | 30 | 3.3 | 9 | AK070850:Os03g0278500 | 30 | 3.3 | 10 | AK069026:Os01g0743300 | 30 | 3.3 | 11 | AK110312: | 29 | 4.4 | 12 | AK119874:Os02g0245000 | 29 | 4.4 | 13 | AK101614:Os12g0612100 | 29 | 4.4 | 14 | AK060783:Os12g0612100 | 29 | 4.4 | 15 | AK071533:Os03g0274700 | 26 | 5.7 | 16 | AK108212:Os06g0134400 | 28 | 9.7 | 17 | AK099276:Os03g0568800 | 28 | 9.7 | 18 | AK070389:Os03g0568800 | 28 | 9.7 |
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>Os04g0308400:Os04g0308400 | Length = 203 Score = 113 bits (283), Expect = 2e-25 Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 6/192 (3%) Frame = +3 Query: 126 ITQKDVADYAMKMINAGGKDINALTFVDNLKERYGNGIAVKCLIYNATGATLSLAKYN-- 299 I+Q D A AM++I+A GK+++AL LK YG+G++ L+YNATGA L L Sbjct: 9 ISQVDRAREAMRLIHAEGKNLDALQHALGLKASYGDGVSAMVLVYNATGAALELVDGEGG 68 Query: 300 --DWHGHIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYRTKIPSSSRSCDWLFSW 473 DW+G++Y P+ QNGQW AFLH HP +R + + D++ +W Sbjct: 69 SMDWYGYVYHEQPPASFQNGQWLAFLHAHPTAQSIGCEAARVFRGR-DVDGQVRDFMVAW 127 Query: 474 TAPYIG-DNGVYTEIREEGHYPSVGSWGYIYGVKLANSNLNSTDE-NYGYVSKTNIGEGS 647 + P+ N YTE+RE+ H+P+ WGYI KL + TD+ + S ++G + Sbjct: 128 SLPWSATQNSAYTEVREKDHFPNY--WGYIKEEKLEKAGKICTDQTDKNCASTVSVGGCT 185 Query: 648 TMNARGVFQYPY 683 + V Q+ + Sbjct: 186 SSEFIAVLQHKF 197
>Os04g0310100:Os04g0310100 | Length = 210 Score = 99.8 bits (247), Expect = 3e-21 Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 4/180 (2%) Frame = +3 Query: 132 QKDVADYAMKMINAGGKDINALTFVDNLKERYGNGIAVKCLIYNATGATLSLAKYNDWHG 311 Q+D A AM ++N GKD A ++V +K+ YGNG + CL+YNATGATL +DW G Sbjct: 27 QEDRAREAMNLVNEDGKDKKAASYVQGVKDWYGNGESTLCLVYNATGATLRHVADHDWWG 86 Query: 312 HIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYR-TKIPSSSRSCDWLFSWTAPYI 488 I TPYP++I NGQW AF HVH YR T R D L +W+ P+ Sbjct: 87 FIGRTPYPTEIGNGQWAAFHHVHKSGDSSGSEAAVVYRGTNADGVER--DLLVAWSTPWS 144 Query: 489 G--DNGVYTEIREEGHYPSVGSWGYIYG-VKLANSNLNSTDENYGYVSKTNIGEGSTMNA 659 N Y + + G W +Y V A N+ + + + T G+ A Sbjct: 145 SFYRNKAYCAVGGVDSFQ--GDWEQLYDKVNNAAYTCNADSDGFKIDASTATGDSPVFTA 202
>AK108905:Os04g0308500 | Length = 210 Score = 99.8 bits (247), Expect = 3e-21 Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 4/180 (2%) Frame = +3 Query: 132 QKDVADYAMKMINAGGKDINALTFVDNLKERYGNGIAVKCLIYNATGATLSLAKYNDWHG 311 Q+D A AM ++N GKD A ++V +K+ YGNG + CL+YNATGATL +DW G Sbjct: 27 QEDRAREAMNLVNEDGKDKKAASYVQGVKDWYGNGESTLCLVYNATGATLRHVADHDWWG 86 Query: 312 HIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYR-TKIPSSSRSCDWLFSWTAPYI 488 I TPYP++I NGQW AF HVH YR T R D L +W+ P+ Sbjct: 87 FIGRTPYPTEIGNGQWAAFHHVHKSGDSSGSEAAVVYRGTNADGVER--DLLVAWSTPWS 144 Query: 489 G--DNGVYTEIREEGHYPSVGSWGYIYG-VKLANSNLNSTDENYGYVSKTNIGEGSTMNA 659 N Y + + G W +Y V A N+ + + + T G+ A Sbjct: 145 SFYRNKAYCAVGGVDSFQ--GDWEQLYDKVNNAAYTCNADSDGFKIDASTATGDSPVFTA 202
>Os04g0308300:Os04g0308300 | Length = 144 Score = 35.0 bits (79), Expect = 0.079 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +3 Query: 462 LFSWTAPYIGDNGVYTEIREEGHYPSVGSWGYIYGVKLANSNLNSTDE-NYGYVSKTNIG 638 LF I + YTE+RE+ H+P+ WGYI KL + TD+ + S ++G Sbjct: 66 LFPQIKRNIQSSSAYTEVREKDHFPNY--WGYIKEEKLEKAGKICTDQTDKNCASTVSVG 123 Query: 639 EGSTMNARGVFQYPY 683 ++ V Q+ + Sbjct: 124 GCTSSEFIAVLQHKF 138
>AK110434: | Length = 785 Score = 31.6 bits (70), Expect = 0.88 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = +1 Query: 355 NGVHSSTSTXXXXXXXXXXXXCIVPRSPPAAGPAIGCSPGPPPTLVT 495 NGV+S+TS P+ PAA PA +P PPP L T Sbjct: 332 NGVNSNTSRK--------------PQPAPAAAPAAAATPKPPPPLTT 364
>AK109755:Os03g0131500 | Length = 372 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 Query: 418 CIVPRSPPAAGPAIGCSPGPPPTLVTTGCTPKSVRKDTTQVWEAGVISM 564 C P SP P+ +P PPP V +P S+ +T W AGV + Sbjct: 46 CAEPSSPEQENPS---TPAPPP--VKPPASPSSLWGISTSTWSAGVAGL 89
>AK110364: | Length = 1006 Score = 29.6 bits (65), Expect = 3.3 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +3 Query: 99 IATGEYKEPITQKDVADYAMKMINAGGKDINALTFVDNLKERYGNGI----AVKCLIYNA 266 I TG+ + + D + +N+G K I+ + VD L+ RY NG A + + Sbjct: 280 IITGDGNDKVLAGSGNDQILATVNSGKKSIDGGSGVDRLELRYVNGAFTAKAENLVNTLS 339 Query: 267 TGATLSLAKYNDWHG 311 G T+ + D HG Sbjct: 340 DGTTIQHVEAYDVHG 354
>AK120222:Os07g0596300 | Length = 754 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +1 Query: 427 PRSPPAAGPAIGCSPGPPPTLVTTGCTP 510 P SPP P G PGPPP G P Sbjct: 176 PPSPPPPPPPPGARPGPPPPPPPPGARP 203
>AK070850:Os03g0278500 | Length = 647 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 477 APYIGDNGVYTEIREEGHYPSVGSWGYIYGVKLANSNLNSTDENYGYVS 623 A Y+GD ++ +REE G G + V++ N S YGYV+ Sbjct: 39 ALYVGD--LHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVN 85
>AK069026:Os01g0743300 | Length = 728 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +1 Query: 442 AAGPAIGCSPGPPPTLVTTGCTPKSVRKDTTQVW 543 AAG A P PPT V G T K V TT +W Sbjct: 233 AAGEAFPDGPWMPPTGVQVGSTFKGVGDPTTPMW 266
>AK110312: | Length = 828 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = -1 Query: 557 ITPASHTWVVSFLTDFGVHPVVTNVGGGPGEQPIAGPAAGGD------LGTIH 417 ++P S V T G P GGG G P GP GGD LG+ H Sbjct: 630 LSPRSRQIVQGEATPRGAMPYGRGGGGGGGMYPSDGPRGGGDTLSLPALGSYH 682
>AK119874:Os02g0245000 | Length = 792 Score = 29.3 bits (64), Expect = 4.4 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +1 Query: 427 PRSPPAAGPAIGCSPGPPPTLVT 495 P+ PP P G P PPPT+ T Sbjct: 19 PQQPPPPPPGGGAKPEPPPTVAT 41
>AK101614:Os12g0612100 | Length = 368 Score = 29.3 bits (64), Expect = 4.4 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Frame = +3 Query: 6 FIHSLTAIDPSKLAKQMASGVFGTPISEKTVIAT--GEYKEPITQKDVADYAMKMINAGG 179 F S T+ P + Q P+ + +A G+ + ++ DY MK + G Sbjct: 204 FFDSCTSTMPDHMFFQACYFANPLPVESASTVAIYHGKATSAVHLYEIIDYPMKALVLTG 263 Query: 180 KDINAL-TFVDNLK-ERYGNGIAVKCLIYN 263 KD+N L FV + + N A LI N Sbjct: 264 KDVNTLANFVSEVSLTLHDNNTAYSLLISN 293
>AK060783:Os12g0612100 | Length = 368 Score = 29.3 bits (64), Expect = 4.4 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Frame = +3 Query: 6 FIHSLTAIDPSKLAKQMASGVFGTPISEKTVIAT--GEYKEPITQKDVADYAMKMINAGG 179 F S T+ P + Q P+ + +A G+ + ++ DY MK + G Sbjct: 204 FFDSCTSTMPDHMFFQACYFANPLPVESASTVAIYHGKATSAVHLYEIIDYPMKALVLTG 263 Query: 180 KDINAL-TFVDNLK-ERYGNGIAVKCLIYN 263 KD+N L FV + + N A LI N Sbjct: 264 KDVNTLANFVSEVSLTLHDNNTAYSLLISN 293
>AK071533:Os03g0274700 | Length = 300 Score = 25.8 bits (55), Expect(2) = 5.7 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -3 Query: 426 YDTQRHQLNQPQHHLGGRGGMHPIAH-SEYLMGRVYHRYGR 307 YD R + + P+ GRG H + H ++ GR Y+ GR Sbjct: 258 YDNFRERPDYPEFRGRGRGEGHVLEHRGQFPGGRAYNSGGR 298 Score = 21.6 bits (44), Expect(2) = 5.7 Identities = 9/21 (42%), Positives = 9/21 (42%) Frame = -1 Query: 473 PGEQPIAGPAAGGDLGTIHNG 411 P P A AGG G H G Sbjct: 232 PPPPPAAAATAGGTYGEAHRG 252
>AK108212:Os06g0134400 | Length = 139 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%) Frame = +1 Query: 421 IVPRSPPAAG--PAIGCSPGPPPTLVT 495 +VP +PP+AG PA G P P P++ + Sbjct: 27 LVPATPPSAGNAPAAGRRPAPSPSMAS 53
>AK099276:Os03g0568800 | Length = 675 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = +1 Query: 433 SPPAAG--PAIGCSPGPPPTLVTTGCTP 510 SPPA P+ G P PP TL+TT P Sbjct: 168 SPPAPREMPSPGTPPSPPTTLITTQAPP 195
>AK070389:Os03g0568800 | Length = 675 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = +1 Query: 433 SPPAAG--PAIGCSPGPPPTLVTTGCTP 510 SPPA P+ G P PP TL+TT P Sbjct: 168 SPPAPREMPSPGTPPSPPTTLITTQAPP 195 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 29,665,293 Number of extensions: 721036 Number of successful extensions: 2688 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2671 Number of HSP's successfully gapped: 19 Length of query: 323 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 222 Effective length of database: 11,355,714 Effective search space: 2520968508 Effective search space used: 2520968508 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
