ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76n02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828851.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA040A08, full insert sequence Length = 1082 Score = 618 bits (312), Expect = e-173 Identities = 611/708 (86%), Gaps = 2/708 (0%) Strand = Plus / Plus Query: 222 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 281 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 151 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 210 Query: 282 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 341 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 211 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 270 Query: 342 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 401 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 271 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 330 Query: 402 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 461 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 331 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 390 Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 391 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 450 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 451 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 510 Query: 582 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 640 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 511 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 569 Query: 641 gctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggcca 700 || || ||||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 570 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 629 Query: 701 gttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttc 760 |||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 630 gttcagcttggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttc 689 Query: 761 tggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgagga 820 ||||||||| ||||| ||||||||||||| | |||| ||| ||||||||||||||||||| Sbjct: 690 tggtataaagaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagga 749 Query: 821 agtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttcaaca 880 |||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| |||| Sbjct: 750 agtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttgaaca 809 Query: 881 cacaaagaagcggcttgggattgagtgaagatatgaccaagcatgaac 928 |||||||||||| |||||||||| ||||||| |||||||| |||||| Sbjct: 810 cacaaagaagcgtcttgggattgcctgaagatgtgaccaaggatgaac 857
>ref|NM_001056286.1| Oryza sativa (japonica cultivar-group) Os03g0283100 (Os03g0283100) mRNA, complete cds Length = 1250 Score = 618 bits (312), Expect = e-173 Identities = 611/708 (86%), Gaps = 2/708 (0%) Strand = Plus / Plus Query: 222 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 281 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 221 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 280 Query: 282 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 341 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 281 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 340 Query: 342 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 401 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 341 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 400 Query: 402 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 461 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 401 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 460 Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 461 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 520 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 521 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 580 Query: 582 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 640 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 581 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 639 Query: 641 gctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggcca 700 || || ||||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 640 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 699 Query: 701 gttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttc 760 |||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 700 gttcagcttggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttc 759 Query: 761 tggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgagga 820 ||||||||| ||||| ||||||||||||| | |||| ||| ||||||||||||||||||| Sbjct: 760 tggtataaagaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagga 819 Query: 821 agtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttcaaca 880 |||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| |||| Sbjct: 820 agtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttgaaca 879 Query: 881 cacaaagaagcggcttgggattgagtgaagatatgaccaagcatgaac 928 |||||||||||| |||||||||| ||||||| |||||||| |||||| Sbjct: 880 cacaaagaagcgtcttgggattgcctgaagatgtgaccaaggatgaac 927
>dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J05, full insert sequence Length = 1252 Score = 618 bits (312), Expect = e-173 Identities = 611/708 (86%), Gaps = 2/708 (0%) Strand = Plus / Plus Query: 222 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 281 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 222 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 281 Query: 282 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 341 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 282 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 341 Query: 342 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 401 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 342 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 401 Query: 402 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 461 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 402 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 461 Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 462 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 521 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 522 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 581 Query: 582 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 640 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 582 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 640 Query: 641 gctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggcca 700 || || ||||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 641 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 700 Query: 701 gttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttc 760 |||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 701 gttcagcttggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttc 760 Query: 761 tggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgagga 820 ||||||||| ||||| ||||||||||||| | |||| ||| ||||||||||||||||||| Sbjct: 761 tggtataaagaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagga 820 Query: 821 agtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttcaaca 880 |||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| |||| Sbjct: 821 agtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttgaaca 880 Query: 881 cacaaagaagcggcttgggattgagtgaagatatgaccaagcatgaac 928 |||||||||||| |||||||||| ||||||| |||||||| |||||| Sbjct: 881 cacaaagaagcgtcttgggattgcctgaagatgtgaccaaggatgaac 928
>dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F06, full insert sequence Length = 1029 Score = 618 bits (312), Expect = e-173 Identities = 611/708 (86%), Gaps = 2/708 (0%) Strand = Plus / Plus Query: 222 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 281 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 98 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 157 Query: 282 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 341 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 158 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 217 Query: 342 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 401 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 218 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 277 Query: 402 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 461 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 278 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 337 Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 338 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 397 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 398 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 457 Query: 582 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 640 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 458 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 516 Query: 641 gctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggcca 700 || || ||||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 517 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 576 Query: 701 gttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttc 760 |||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 577 gttcagcttggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttc 636 Query: 761 tggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgagga 820 ||||||||| ||||| ||||||||||||| | |||| ||| ||||||||||||||||||| Sbjct: 637 tggtataaagaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagga 696 Query: 821 agtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttcaaca 880 |||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| |||| Sbjct: 697 agtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttgaaca 756 Query: 881 cacaaagaagcggcttgggattgagtgaagatatgaccaagcatgaac 928 |||||||||||| |||||||||| ||||||| |||||||| |||||| Sbjct: 757 cacaaagaagcgtcttgggattgcctgaagatgtgaccaaggatgaac 804
>gb|AY111952.1| Zea mays CL5438_1 mRNA sequence Length = 1008 Score = 210 bits (106), Expect = 8e-51 Identities = 199/230 (86%) Strand = Plus / Plus Query: 267 ggcacgaccaggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgcc 326 ||||| ||||||||||| || || |||| ||||||| ||||||||||||||||||||| Sbjct: 108 ggcaccaccaggttgtacgtggcctatctttgcccgttcgcgcagcgcgcttggattgct 167 Query: 327 aggaattacaagggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacagg 386 || || ||||||||| | || |||||||| |||||||| || ||||||| || |||||| Sbjct: 168 agaaactacaagggtctacaggacaagattaagatagttgccatcgatctcgctgacagg 227 Query: 387 cccgcctggtacaaggagaaggtttacccacagaacaaggtgccttcactggagcataat 446 || || |||||||||||||||||||| ||| | |||||||||||||| || ||||| | Sbjct: 228 ccagcgtggtacaaggagaaggtttatccagaaaacaaggtgccttctctagagcacgac 287 Query: 447 aaccaagtgaaaggagagagcttggatttggtcaagtacattgacagcaa 496 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 288 aaccaggtgaaaggagagagcttggatttggttaagtacattgacagcaa 337 Score = 184 bits (93), Expect = 5e-43 Identities = 232/280 (82%) Strand = Plus / Plus Query: 624 gaggaaactgttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatggc 683 |||||| | |||||||| |||| |||||||||| ||||||||| || || | || ||| Sbjct: 465 gaggaagccgttgctgccttggacaaaatagaagacgccctggggaaattcaacgacggc 524 Query: 684 cctttcttccttggccagttcagtttggtggacattgcatatgtgccatttatcgaaagg 743 || ||||||||||| ||||||||| |||||||| |||| ||||| || || ||||| ||| Sbjct: 525 ccgttcttccttggtcagttcagtctggtggacgttgcgtatgtaccgttcatcgagagg 584 Query: 744 tttcagatattcttttctggtataaaaaactatgatatcaccaaggacagacctaacatt 803 |||||||| ||| ||| ||||| |||||||| ||||| |||| |||||| ||| || Sbjct: 585 cttcagatactctattccaccataaagaactatgacatcacaaagggcagacccaacctt 644 Query: 804 cagaaattcatcgaggaagtgaacaagatcgatgcatacacacaaacgaagctggaccca 863 ||||||||||||||||||||||||||||||||||| |||||||| || || |||||||| Sbjct: 645 cagaaattcatcgaggaagtgaacaagatcgatgcgtacacacagactaaactggacccg 704 Query: 864 caatttctgcttcaacacacaaagaagcggcttgggattg 903 || |||| | || |||||||||||||||||||||| Sbjct: 705 cagnnnnngcttgagcaaacaaagaagcggcttgggattg 744
>gb|AY108092.1| Zea mays PCO124824 mRNA sequence Length = 658 Score = 180 bits (91), Expect = 7e-42 Identities = 247/299 (82%) Strand = Plus / Plus Query: 605 ctccaagggagatgttgcagaggaaactgttgctgcgctggataaaatagaagccgccct 664 |||||||| |||||| | |||||| |||| ||||| ||||||||||| || |||||| Sbjct: 55 ctccaaggaagatgtgtctgaggaagctgtcgctgctttggataaaataaaaaacgccct 114 Query: 665 gggaaagtttagtgatggccctttcttccttggccagttcagtttggtggacattgcata 724 || || || | || || || |||| |||||| ||||||||| ||||||||||||| || Sbjct: 115 cgggaaattcaacgagggtccattctcccttggtcagttcagtctggtggacattgcgta 174 Query: 725 tgtgccatttatcgaaaggtttcagatattcttttctggtataaaaaactatgatatcac 784 ||| ||||| ||||| |||||||||||||||| ||| ||||| ||||||||||| || Sbjct: 175 tgtaccattcatcgagaggtttcagatattctattccaacataaagaactatgatattac 234 Query: 785 caaggacagacctaacattcagaaattcatcgaggaagtgaacaagatcgatgcatacac 844 |||| |||||| ||| ||||||| ||||| ||||||||| ||||||| ||||||||||| Sbjct: 235 aaagggcagacccaaccttcagaagttcattgaggaagtggacaagattgatgcatacac 294 Query: 845 acaaacgaagctggacccacaatttctgcttcaacacacaaagaagcggcttgggattg 903 ||| || || | ||||||||| ||| | ||| | || |||||||||||||||||||||| Sbjct: 295 acagactaaacaggacccacagtttttacttgagcagacaaagaagcggcttgggattg 353
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 147 bits (74), Expect = 1e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 710 ggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttctggtataaa 769 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 105971 ggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttctggtataaa 105912 Query: 770 aaactatgatatcaccaaggacagacctaacattcagaaattcatcgagg 819 ||||| ||||||||||||| | |||| ||| |||||||||||||||||| Sbjct: 105911 gaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagg 105862 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 337 agggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggt 396 |||||||||| || ||||||||||| ||||| | ||||||||||||||||| || |||| Sbjct: 107074 agggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggt 107015 Query: 397 acaaggagaaggtttacccacagaacaaggt 427 |||||||||||||||||||| |||||||||| Sbjct: 107014 acaaggagaaggtttacccagagaacaaggt 106984 Score = 99.6 bits (50), Expect = 2e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 424 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 483 |||| |||||||| ||||| || || || ||||||||||| ||||||||||||||||||| Sbjct: 106574 aggtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagt 106515 Query: 484 acattgacagcaatttcgatggccctgcattgcttcctgatg 525 ||||||||| ||||||||| || || ||||| || ||||||| Sbjct: 106514 acattgacaccaatttcgaagggccagcattactccctgatg 106473 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 275 caggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaatta 334 ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 107295 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 107236 Query: 335 caagg 339 ||||| Sbjct: 107235 caagg 107231 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 817 aggaagtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttc 876 |||||||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| Sbjct: 105665 aggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttg 105606 Query: 877 aacacacaaagaagcggcttggg 899 |||||||||||||||| |||||| Sbjct: 105605 aacacacaaagaagcgtcttggg 105583 Score = 63.9 bits (32), Expect = 1e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 633 gttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttc 692 |||||||| || || ||||||||||| || ||| |||||| | |||||||| |||||| Sbjct: 106162 gttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttc 106103 Query: 693 cttggccagttcagtttggt 712 |||||||||||||| ||||| Sbjct: 106102 cttggccagttcagcttggt 106083 Score = 50.1 bits (25), Expect = 0.018 Identities = 112/141 (79%) Strand = Plus / Minus Query: 710 ggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttctggtataaa 769 |||||||||||| |||||| || |||| |||||| ||||||||| || ||| ||||| Sbjct: 110712 ggtggacattgcgtatgtgacaattattgaaaggattcagatatactactctcatataag 110653 Query: 770 aaactatgatatcaccaaggacagacctaacattcagaaattcatcgaggaagtgaacaa 829 || || || |||||||| | | | || ||| | ||||||||||||||||| | |||| Sbjct: 110652 gaaatacgagatcaccaatggccggcccaacctcgagaaattcatcgaggaaatcaacag 110593 Query: 830 gatcgatgcatacacacaaac 850 ||||| ||||| |||||||| Sbjct: 110592 aatcgaagcatatacacaaac 110572 Score = 46.1 bits (23), Expect = 0.28 Identities = 59/71 (83%) Strand = Plus / Minus Query: 549 gaggagctgcttgtgtataccgatgagttcaataaagcactatactcatccataacctcc 608 |||||||| |||| ||| || |||| |||||| |||||| |||||||||||| | || Sbjct: 106357 gaggagcttcttgcgtacactgatgcgttcaacaaagcatcgtactcatccatagtcgcc 106298 Query: 609 aagggagatgt 619 ||||||||||| Sbjct: 106297 aagggagatgt 106287 Score = 42.1 bits (21), Expect = 4.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 633 gttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttc 692 |||||||| ||||| || |||||||| |||||| ||||| ||||||| || |||||| Sbjct: 111370 gttgctgctctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttc 111311 Query: 693 cttgg 697 ||||| Sbjct: 111310 cttgg 111306
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 147 bits (74), Expect = 1e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 710 ggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttctggtataaa 769 |||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 9683193 ggtggacattgcgtatgttccatttattgaaaggtttcagatattcttttctggtataaa 9683134 Query: 770 aaactatgatatcaccaaggacagacctaacattcagaaattcatcgagg 819 ||||| ||||||||||||| | |||| ||| |||||||||||||||||| Sbjct: 9683133 gaactacgatatcaccaagggccgacccaaccttcagaaattcatcgagg 9683084 Score = 109 bits (55), Expect = 2e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 337 agggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggt 396 |||||||||| || ||||||||||| ||||| | ||||||||||||||||| || |||| Sbjct: 9684296 agggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggt 9684237 Query: 397 acaaggagaaggtttacccacagaacaaggt 427 |||||||||||||||||||| |||||||||| Sbjct: 9684236 acaaggagaaggtttacccagagaacaaggt 9684206 Score = 99.6 bits (50), Expect = 2e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 424 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 483 |||| |||||||| ||||| || || || ||||||||||| ||||||||||||||||||| Sbjct: 9683796 aggtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagt 9683737 Query: 484 acattgacagcaatttcgatggccctgcattgcttcctgatg 525 ||||||||| ||||||||| || || ||||| || ||||||| Sbjct: 9683736 acattgacaccaatttcgaagggccagcattactccctgatg 9683695 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 275 caggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaatta 334 ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 9684517 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 9684458 Query: 335 caagg 339 ||||| Sbjct: 9684457 caagg 9684453 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 817 aggaagtgaacaagatcgatgcatacacacaaacgaagctggacccacaatttctgcttc 876 |||||||||||||||| |||| || ||| |||| || | ||||||||| ||| ||||| Sbjct: 9682887 aggaagtgaacaagattcatgcctatacagaaaccaaacaggacccacagtttttgcttg 9682828 Query: 877 aacacacaaagaagcggcttggg 899 |||||||||||||||| |||||| Sbjct: 9682827 aacacacaaagaagcgtcttggg 9682805 Score = 63.9 bits (32), Expect = 1e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 633 gttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttc 692 |||||||| || || ||||||||||| || ||| |||||| | |||||||| |||||| Sbjct: 9683384 gttgctgctcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttc 9683325 Query: 693 cttggccagttcagtttggt 712 |||||||||||||| ||||| Sbjct: 9683324 cttggccagttcagcttggt 9683305 Score = 50.1 bits (25), Expect = 0.018 Identities = 112/141 (79%) Strand = Plus / Minus Query: 710 ggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttctggtataaa 769 |||||||||||| |||||| || |||| |||||| ||||||||| || ||| ||||| Sbjct: 9687934 ggtggacattgcgtatgtgacaattattgaaaggattcagatatactactctcatataag 9687875 Query: 770 aaactatgatatcaccaaggacagacctaacattcagaaattcatcgaggaagtgaacaa 829 || || || |||||||| | | | || ||| | ||||||||||||||||| | |||| Sbjct: 9687874 gaaatacgagatcaccaatggccggcccaacctcgagaaattcatcgaggaaatcaacag 9687815 Query: 830 gatcgatgcatacacacaaac 850 ||||| ||||| |||||||| Sbjct: 9687814 aatcgaagcatatacacaaac 9687794 Score = 46.1 bits (23), Expect = 0.28 Identities = 59/71 (83%) Strand = Plus / Minus Query: 549 gaggagctgcttgtgtataccgatgagttcaataaagcactatactcatccataacctcc 608 |||||||| |||| ||| || |||| |||||| |||||| |||||||||||| | || Sbjct: 9683579 gaggagcttcttgcgtacactgatgcgttcaacaaagcatcgtactcatccatagtcgcc 9683520 Query: 609 aagggagatgt 619 ||||||||||| Sbjct: 9683519 aagggagatgt 9683509 Score = 42.1 bits (21), Expect = 4.3 Identities = 54/65 (83%) Strand = Plus / Minus Query: 633 gttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttc 692 |||||||| ||||| || |||||||| |||||| ||||| ||||||| || |||||| Sbjct: 9688592 gttgctgctctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttc 9688533 Query: 693 cttgg 697 ||||| Sbjct: 9688532 cttgg 9688528
>ref|NM_001056287.1| Oryza sativa (japonica cultivar-group) Os03g0283200 (Os03g0283200) mRNA, complete cds Length = 1045 Score = 113 bits (57), Expect = 1e-21 Identities = 306/389 (78%) Strand = Plus / Plus Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 ||||| || |||||| |||||||||| |||||| ||||||| ||||||||| |||| ||| Sbjct: 315 gagagtttagatttgatcaagtacatcgacagccatttcgaaggccctgcactgctccct 374 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 || ||| ||| |||| |||||| | || ||||| ||| |||| || ||| ||| | Sbjct: 375 gaagatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttacc 434 Query: 582 aaagcactatactcatccataacctccaagggagatgttgcagaggaaactgttgctgcg 641 |||||||| |||||| || ||| |||||| | |||| | ||| || || |||||||| Sbjct: 435 aaagcactctactcacccttaatctccaaagcagatttgtcagctgagacggttgctgct 494 Query: 642 ctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggccag 701 ||||| || |||||||| |||||| ||||| ||||||| || ||||||||||| || Sbjct: 495 ctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttccttggacaa 554 Query: 702 ttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttct 761 || || |||||||||||||| |||||| || |||| |||||| ||||||||| || ||| Sbjct: 555 tttagcttggtggacattgcgtatgtgacaattattgaaaggattcagatatactactct 614 Query: 762 ggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgaggaa 821 ||||| || || || |||||||| | | | || ||| | ||||||||||||||||| Sbjct: 615 catataaggaaatacgagatcaccaatggccggcccaacctcgagaaattcatcgaggaa 674 Query: 822 gtgaacaagatcgatgcatacacacaaac 850 | |||| ||||| ||||| |||||||| Sbjct: 675 atcaacagaatcgaagcatatacacaaac 703 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 296 ctgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagat 355 |||||||| || ||||||||||||||| |||||| | |||||| ||||| |||||||| Sbjct: 149 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 208 Query: 356 caagatagtcg 366 | || |||||| Sbjct: 209 cgagctagtcg 219
>gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds Length = 1058 Score = 113 bits (57), Expect = 1e-21 Identities = 306/389 (78%) Strand = Plus / Plus Query: 462 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 521 ||||| || |||||| |||||||||| |||||| ||||||| ||||||||| |||| ||| Sbjct: 315 gagagtttagatttgatcaagtacatcgacagccatttcgaaggccctgcactgctccct 374 Query: 522 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 581 || ||| ||| |||| |||||| | || ||||| ||| |||| || ||| ||| | Sbjct: 375 gaagatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttacc 434 Query: 582 aaagcactatactcatccataacctccaagggagatgttgcagaggaaactgttgctgcg 641 |||||||| |||||| || ||| |||||| | |||| | ||| || || |||||||| Sbjct: 435 aaagcactctactcacccttaatctccaaagcagatttgtcagctgagacggttgctgct 494 Query: 642 ctggataaaatagaagccgccctgggaaagtttagtgatggccctttcttccttggccag 701 ||||| || |||||||| |||||| ||||| ||||||| || ||||||||||| || Sbjct: 495 ctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttccttggacaa 554 Query: 702 ttcagtttggtggacattgcatatgtgccatttatcgaaaggtttcagatattcttttct 761 || || |||||||||||||| |||||| || |||| |||||| ||||||||| || ||| Sbjct: 555 tttagcttggtggacattgcgtatgtgacaattattgaaaggattcagatatactactct 614 Query: 762 ggtataaaaaactatgatatcaccaaggacagacctaacattcagaaattcatcgaggaa 821 ||||| || || || |||||||| | | | || ||| | ||||||||||||||||| Sbjct: 615 catataaggaaatacgagatcaccaatggccggcccaacctcgagaaattcatcgaggaa 674 Query: 822 gtgaacaagatcgatgcatacacacaaac 850 | |||| ||||| ||||| |||||||| Sbjct: 675 atcaacagaatcgaagcatatacacaaac 703 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 296 ctgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagat 355 |||||||| || ||||||||||||||| |||||| | |||||| ||||| |||||||| Sbjct: 149 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 208 Query: 356 caagatagtcg 366 | || |||||| Sbjct: 209 cgagctagtcg 219
>gb|DQ245388.1| Zea mays clone 14971 mRNA sequence Length = 1055 Score = 97.6 bits (49), Expect = 8e-17 Identities = 136/165 (82%) Strand = Plus / Plus Query: 393 tggtacaaggagaaggtttacccacagaacaaggtgccttcactggagcataataaccaa 452 ||||||||||||||||||||||||||| || ||||||||| |||||||| | | | Sbjct: 320 tggtacaaggagaaggtttacccacagggcacggtgccttccctggagcacgacggcaag 379 Query: 453 gtgaaaggagagagcttggatttggtcaagtacattgacagcaatttcgatggccctgca 512 || | |||||||||||||||||| |||||||||| |||||||| ||| | ||||| ||| Sbjct: 380 gtcaccggagagagcttggatttgatcaagtacatcgacagcaacttccacggcccggca 439 Query: 513 ttgcttcctgatgattctgcaaagaagcagttttccgaggagctg 557 |||||||| | ||| | ||||||| |||||| |||| |||||| Sbjct: 440 ctgcttcctcaagatcccgcaaagaggcagttcgccgatgagctg 484 Score = 42.1 bits (21), Expect = 4.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 681 ggccctttcttccttggccagttcagtttggtggacattgc 721 ||||| |||||||||||||| || || |||||||| ||||| Sbjct: 608 ggcccgttcttccttggccaatttagcttggtggatattgc 648
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 424 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 483 |||||||||| || ||||| | ||||| ||||||||||||||||||||||||| |||| Sbjct: 241428 aggtgccttctctagagcacgacaaccatatgaaaggagagagcttggatttggttaagt 241487 Query: 484 acattgacagcaatttcga 502 | ||||||||||| ||||| Sbjct: 241488 atattgacagcaacttcga 241506 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 381 gacaggcccgcctggtacaaggagaaggtttacccacagaacaaggtg 428 |||||||| || |||||||||||||||||||| ||| | ||||||||| Sbjct: 241257 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 241304
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 424 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 483 |||||||||| || ||||| | ||||| ||||||||||||||||||||||||| |||| Sbjct: 226916 aggtgccttctctagagcacgacaaccatatgaaaggagagagcttggatttggttaagt 226975 Query: 484 acattgacagcaatttcga 502 | ||||||||||| ||||| Sbjct: 226976 atattgacagcaacttcga 226994 Score = 56.0 bits (28), Expect = 3e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 381 gacaggcccgcctggtacaaggagaaggtttacccacagaacaaggtg 428 |||||||| || |||||||||||||||||||| ||| | ||||||||| Sbjct: 226745 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 226792
>emb|Y17386.1|TAE17386 Triticum aestivum mRNA for putative In2.1-like protein Length = 1031 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 459 ggagagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgctt 518 |||||||||||||||||| |||||||||| |||| ||||||| | ||||| ||| ||||| Sbjct: 318 ggagagagcttggatttgatcaagtacatcgacaccaatttccaaggcccggcactgctt 377 Query: 519 cct 521 ||| Sbjct: 378 cct 380 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 393 tggtacaaggagaaggtttacccacagaacaaggtgccttcactggagca 442 ||||||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 252 tggtacaaggagaaggtttacccacagggcacggtgccttccctggagca 301 Score = 56.0 bits (28), Expect = 3e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 622 cagaggaaactgttgctgcgctggataaaatagaagccgccctgggaaagtttagtgatg 681 |||| ||| |||||||||| || || || || ||||| |||||| ||||| || || | Sbjct: 481 cagacgaagctgttgctgctctagacaagatcgaagctgccctgtccaagttcagcgacg 540 Query: 682 gccctttcttccttggccagttcagtttggtggacattgc 721 |||| |||||||||||||| || || |||||||||||||| Sbjct: 541 gcccgttcttccttggccaatttagcttggtggacattgc 580
>ref|NM_120356.2| Arabidopsis thaliana unknown protein (AT5G02780) mRNA, complete cds Length = 812 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 668 aaagtttagtgatggccctttcttccttggccagttcagtttggtggacattgcatatgt 727 ||||||| |||||| ||||||||||||||| || | |||||||| || ||||||||| | Sbjct: 483 aaagtttgatgatggtcctttcttccttggcgagcttagtttggttgatattgcatatat 542 Query: 728 gccatttatcgaa 740 |||||||||||| Sbjct: 543 cccatttatcgaa 555
>gb|BT012424.1| Arabidopsis thaliana At5g02780 mRNA, complete cds Length = 714 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 668 aaagtttagtgatggccctttcttccttggccagttcagtttggtggacattgcatatgt 727 ||||||| |||||| ||||||||||||||| || | |||||||| || ||||||||| | Sbjct: 483 aaagtttgatgatggtcctttcttccttggcgagcttagtttggttgatattgcatatat 542 Query: 728 gccatttatcgaa 740 |||||||||||| Sbjct: 543 cccatttatcgaa 555
>gb|BT010718.1| Arabidopsis thaliana At5g02780 mRNA, complete cds Length = 993 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 668 aaagtttagtgatggccctttcttccttggccagttcagtttggtggacattgcatatgt 727 ||||||| |||||| ||||||||||||||| || | |||||||| || ||||||||| | Sbjct: 564 aaagtttgatgatggtcctttcttccttggcgagcttagtttggttgatattgcatatat 623 Query: 728 gccatttatcgaa 740 |||||||||||| Sbjct: 624 cccatttatcgaa 636
>ref|NM_001056285.1| Oryza sativa (japonica cultivar-group) Os03g0283000 (Os03g0283000) mRNA, complete cds Length = 1081 Score = 61.9 bits (31), Expect = 5e-06 Identities = 132/163 (80%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 677 tgatggccctttcttccttggccagttcagtttggtggacattgcatatgtgccatttat 736 ||||||||| |||||||||||||| || ||| |||| |||||||| |||| || ||||| Sbjct: 521 tgatggcccattcttccttggccaatttagtctggttgacattgcgtatgcaccttttat 580 Query: 737 cgaaaggtttcagatattcttttctggtataaaaaactatgatatcac-caaggacagac 795 || | ||||||| | | ||| |||| ||||| ||||||||||| || ||||| || Sbjct: 581 tgatggatttcagacactgtttgctggcataaagaactatgatattactgaagga-aggg 639 Query: 796 ctaacattcagaaattcatcgaggaagtgaacaagatcgatgc 838 ||||||| |||| ||||| ||||| |||||||||||||||| Sbjct: 640 ctaacatacagattttcattaaggaattgaacaagatcgatgc 682 Score = 44.1 bits (22), Expect = 1.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 297 tgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagatc 356 ||||| || ||||| || || ||||| || ||||| |||||||||||||| || |||||| Sbjct: 144 tgcccatatgcgcaacgggcatggatcgcaaggaactacaagggtttgcaggagaagatc 203 Query: 357 aa 358 || Sbjct: 204 aa 205 Score = 44.1 bits (22), Expect = 1.1 Identities = 64/78 (82%) Strand = Plus / Plus Query: 459 ggagagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgctt 518 |||||||| ||||||||| |||||||||| |||| ||| || | ||||| |||| | Sbjct: 303 ggagagagtttggatttgatcaagtacatagacatcaactttgcaggccccagattgact 362 Query: 519 cctgatgattctgcaaag 536 ||||||||||||| |||| Sbjct: 363 cctgatgattctgaaaag 380
>gb|AY332468.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase (GST) mRNA, complete cds Length = 1092 Score = 61.9 bits (31), Expect = 5e-06 Identities = 132/163 (80%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 677 tgatggccctttcttccttggccagttcagtttggtggacattgcatatgtgccatttat 736 ||||||||| |||||||||||||| || ||| |||| |||||||| |||| || ||||| Sbjct: 521 tgatggcccattcttccttggccaatttagtctggttgacattgcgtatgcaccttttat 580 Query: 737 cgaaaggtttcagatattcttttctggtataaaaaactatgatatcac-caaggacagac 795 || | ||||||| | | ||| |||| ||||| ||||||||||| || ||||| || Sbjct: 581 tgatggatttcagacactgtttgctggcataaagaactatgatattactgaagga-aggg 639 Query: 796 ctaacattcagaaattcatcgaggaagtgaacaagatcgatgc 838 ||||||| |||| ||||| ||||| |||||||||||||||| Sbjct: 640 ctaacatacagattttcattaaggaattgaacaagatcgatgc 682 Score = 44.1 bits (22), Expect = 1.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 297 tgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagatc 356 ||||| || ||||| || || ||||| || ||||| |||||||||||||| || |||||| Sbjct: 144 tgcccatatgcgcaacgggcatggatcgcaaggaactacaagggtttgcaggagaagatc 203 Query: 357 aa 358 || Sbjct: 204 aa 205
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 424 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 483 |||||||| || | ||||||||||||| ||||| |||||||||| | || || | |||| Sbjct: 20765 aggtgcctgcattagagcataataaccgagtgataggagagagccttgacctgattaagt 20824 Query: 484 acattgacagcaatttcga 502 |||| |||| ||||||||| Sbjct: 20825 acatcgacaccaatttcga 20843
>gb|DQ450070.1| Arachis hypogaea clone 7A4R17G putative IN2-1 protein mRNA, partial cds Length = 625 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 809 attcatcgaggaagtgaacaagatcgatgcatacacacaaac 850 |||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 315 attcattgaggaggtgaacaagattgatgcatatacacaaac 356
>emb|X58573.1|ZMIN21 Maize In2-1 mRNA Length = 906 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 tggtacaaggagaaggtttacccacagaacaaggtgccttcactggagca 442 ||||||||||| ||||||||| ||||| || ||||||||| |||||||| Sbjct: 237 tggtacaaggacaaggtttacgcacagggcacggtgccttccctggagca 286
>gb|AF249913.1|AF249913 Glycine max In2-1 protein mRNA, complete cds Length = 1024 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 677 tgatggccctttcttccttggccagttcagtttggtggacattgcatatgtgccattt 734 |||||| || ||||| |||||||| |||||||||||||| ||||| ||| | |||||| Sbjct: 516 tgatgggccattcttgcttggccaattcagtttggtggatattgcttatattccattt 573
>gb|DQ294619.1| Arachis hypogaea IN2-1 protein-like mRNA, partial sequence Length = 425 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 809 attcatcgaggaagtgaacaagatcgatgcatacacacaaac 850 |||||| ||||| ||||||||||| |||||||| |||||||| Sbjct: 347 attcattgaggaggtgaacaagattgatgcatatacacaaac 388
>dbj|AK227162.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL09-87-D11 Length = 977 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 384 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 430 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 232 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 278
>ref|XM_001104249.1| PREDICTED: Macaca mulatta similar to CG4025-PA, transcript variant 1 (LOC702812), mRNA Length = 1914 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatcac 784 ||||||||||||||||||||||| Sbjct: 1052 ggtataaaaaactatgatatcac 1030
>ref|XM_001104325.1| PREDICTED: Macaca mulatta similar to CG4025-PA, transcript variant 2 (LOC702812), mRNA Length = 2175 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatcac 784 ||||||||||||||||||||||| Sbjct: 1313 ggtataaaaaactatgatatcac 1291
>ref|NM_120357.3| Arabidopsis thaliana unknown protein (AT5G02790) mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 384 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 430 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 244 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 290
>gb|AY140069.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 955 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 384 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 430 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 213 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 259
>gb|AY085126.1| Arabidopsis thaliana clone 13224 mRNA, complete sequence Length = 987 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 384 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 430 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 245 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 291
>gb|BT002166.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 763 Score = 46.1 bits (23), Expect = 0.28 Identities = 41/47 (87%) Strand = Plus / Plus Query: 384 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 430 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 196 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 242
>emb|CR855099.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0096P03, complete sequence Length = 88065 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Plus Query: 164 cgtcgccatggccgccgcagccgctgccgc 193 |||||||||||||||||| ||||| ||||| Sbjct: 45996 cgtcgccatggccgccgccgccgccgccgc 46025
>ref|NM_001043222.1| Drosophila melanogaster Pox meso CG9610-RC (Poxm), mRNA Length = 1781 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 tggccgccgcagccgctgccgc 193 |||||||||||||||||||||| Sbjct: 1456 tggccgccgcagccgctgccgc 1477
>ref|XM_001161938.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 4 (LOC457117), mRNA Length = 1950 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1070 ggtataaaaaactatgatatca 1049
>ref|XM_001161898.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 3 (LOC457117), mRNA Length = 1726 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 846 ggtataaaaaactatgatatca 825
>ref|XM_001161859.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 2 (LOC457117), mRNA Length = 1831 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 951 ggtataaaaaactatgatatca 930
>ref|XM_001162090.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 7 (LOC457117), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1598 ggtataaaaaactatgatatca 1577
>ref|XM_001162049.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 6 (LOC457117), mRNA Length = 2209 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1329 ggtataaaaaactatgatatca 1308
>ref|XM_001162015.1| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 5 (LOC457117), mRNA Length = 2406 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1526 ggtataaaaaactatgatatca 1505
>ref|XM_513647.2| PREDICTED: Pan troglodytes similar to WWFQ154, transcript variant 8 (LOC457117), mRNA Length = 2047 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1167 ggtataaaaaactatgatatca 1146
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 tggccgccgcagccgctgccgc 193 |||||||||||||||||||||| Sbjct: 4145857 tggccgccgcagccgctgccgc 4145836
>ref|XM_001073459.1| PREDICTED: Rattus norvegicus oligodendrocyte transcription factor 2 (predicted) (Olig2_predicted), mRNA Length = 2551 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgcaccggt 199 ||||||||||||||||||||| |||| Sbjct: 940 gccgccgcagccgctgccgcagcggt 965
>ref|XM_221668.4| PREDICTED: Rattus norvegicus oligodendrocyte transcription factor 2 (predicted) (Olig2_predicted), mRNA Length = 2601 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgcaccggt 199 ||||||||||||||||||||| |||| Sbjct: 990 gccgccgcagccgctgccgcagcggt 1015
>gb|BT025043.1| Drosophila melanogaster IP16421 full insert cDNA Length = 2570 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 tggccgccgcagccgctgccgc 193 |||||||||||||||||||||| Sbjct: 1440 tggccgccgcagccgctgccgc 1461
>ref|XM_967227.1| PREDICTED: Tribolium castaneum similar to CG9151-PA, isoform A (LOC661038), mRNA Length = 1149 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 gccatggccgccgcagccgctgccgc 193 |||||||||||||| ||||||||||| Sbjct: 610 gccatggccgccgccgccgctgccgc 635
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 174 gccgccgcagccgctgccgcaccggt 199 ||||||||||||||||||||| |||| Sbjct: 110263 gccgccgcagccgctgccgcagcggt 110238
>ref|NM_001046851.1| Bombyx mori NADH dehydrogenase (ubiquinone) Fe-S protein 8 (LOC693098), mRNA gb|DQ311293.1| Bombyx mori NADH dehydrogenase (ubiquinone) Fe-S protein 8 mRNA, complete cds Length = 1532 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 402 gagaaggtttacccacagaaca 423 |||||||||||||||||||||| Sbjct: 190 gagaaggtttacccacagaaca 211
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1015 atgaataaaaagatgcatgcta 1036 |||||||||||||||||||||| Sbjct: 120547 atgaataaaaagatgcatgcta 120526
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ccgtcgccatggccgccgcagccgctgccg 192 ||||||||||||||||||| ||||| |||| Sbjct: 19692464 ccgtcgccatggccgccgccgccgccgccg 19692435
>emb|AL355816.14| Human DNA sequence from clone RP5-1180E21 on chromosome 1 Contains a gene for a novel protein (DKFZp313E1815), a gene for choline/ethanolaminephosphotransferase (CEPT1), a gene (FLJ22457) for a novel protein, the 5' end of a novel transcript (DKFZp313J1722) and a CpG island, complete sequence Length = 141686 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 37925 ggtataaaaaactatgatatca 37946
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 tggccgccgcagccgctgccgc 193 |||||||||||||||||||||| Sbjct: 140914 tggccgccgcagccgctgccgc 140935
>emb|CR626576.1| full-length cDNA clone CS0DI006YB10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1243 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1053 ggtataaaaaactatgatatca 1032
>emb|CR613969.1| full-length cDNA clone CS0DI042YD14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1726 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1208 ggtataaaaaactatgatatca 1187
>emb|CR607093.1| full-length cDNA clone CS0DI013YN23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1855 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1313 ggtataaaaaactatgatatca 1292
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ccgtcgccatggccgccgcagccgctgccg 192 ||||||||||||||||||| ||||| |||| Sbjct: 24470 ccgtcgccatggccgccgccgccgccgccg 24441
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 44.1 bits (22), Expect = 1.1 Identities = 28/30 (93%) Strand = Plus / Minus Query: 163 ccgtcgccatggccgccgcagccgctgccg 192 ||||||||||||||||||| ||||| |||| Sbjct: 131114 ccgtcgccatggccgccgccgccgccgccg 131085
>emb|AL833098.1|HSM804409 Homo sapiens mRNA; cDNA DKFZp313E1815 (from clone DKFZp313E1815) Length = 1937 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 762 ggtataaaaaactatgatatca 783 |||||||||||||||||||||| Sbjct: 1698 ggtataaaaaactatgatatca 1677
>ref|NM_009233.2| Mus musculus SRY-box containing gene 1 (Sox1), mRNA Length = 1210 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 1100 ggccgccgcagccgctgccgc 1080
>ref|NM_001058816.1| Oryza sativa (japonica cultivar-group) Os04g0226400 (Os04g0226400) mRNA, partial cds Length = 2974 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 385 gccgccgcagccgctgccgca 405
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 12608960 ggccgccgcagccgctgccgc 12608980
>gb|DQ138631.1| Zea mays cultivar CO159 brittle stalk 2 (bk2) gene, partial sequence Length = 1317 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cgccatggccgccgcagccgc 187 ||||||||||||||||||||| Sbjct: 917 cgccatggccgccgcagccgc 897
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 gaccgtcgccatggccgccgc 181 ||||||||||||||||||||| Sbjct: 1174716 gaccgtcgccatggccgccgc 1174696
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 110951 ggccgccgcagccgctgccgc 110931
>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence Length = 162463 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 154924 ggccgccgcagccgctgccgc 154904
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 ccgtcgccatggccgccgcagccgc 187 |||||| |||||||||||||||||| Sbjct: 2006105 ccgtcggcatggccgccgcagccgc 2006129
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 136988 ggccgccgcagccgctgccgc 137008
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 2216 ggccgccgcagccgctgccgc 2196
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 1443 ggccgccgcagccgctgccgc 1423
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 1363 ggccgccgcagccgctgccgc 1343
>gb|DQ027015.1| Chlamydomonas reinhardtii MCD1 (MCD1) mRNA, complete cds Length = 5213 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 2865 gccgccgcagccgctgccgca 2885
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 73851 ggccgccgcagccgctgccgc 73871
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 9045 ggccgccgcagccgctgccgc 9065
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 454 tgaaaggagagagcttggatt 474 ||||||||||||||||||||| Sbjct: 74320 tgaaaggagagagcttggatt 74300
>tpg|BK005744.1| TPA_exp: Drosophila melanogaster dosage compensation complex binding fragment 12, complete sequence Length = 5163 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 2234 ggccgccgcagccgctgccgc 2254
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 ccgtcgccatggccgccgcagccgc 187 |||||| |||||||||||||||||| Sbjct: 40150 ccgtcggcatggccgccgcagccgc 40126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 8412190 gccgccgcagccgctgccgca 8412210
>gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence Length = 173087 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 945 ctgcagcatggaagatggaga 965 ||||||||||||||||||||| Sbjct: 54137 ctgcagcatggaagatggaga 54117
>emb|X94126.1|MMSOX1 M.musculus SOX1 gene Length = 2376 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 1527 ggccgccgcagccgctgccgc 1507
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 25565 gccgccgcagccgctgccgca 25585
>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project) Length = 104769 Score = 42.1 bits (21), Expect = 4.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 668 aaagtttagtgatggccctttcttccttggccagttcagtttggt 712 ||||||| |||||| ||||||||||||||| || | |||||||| Sbjct: 27393 aaagtttgatgatggtcctttcttccttggcgagcttagtttggt 27437
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 ccgtcgccatggccgccgcagccgc 187 |||||| |||||||||||||||||| Sbjct: 15098 ccgtcggcatggccgccgcagccgc 15074
>gb|AC023842.5|AC023842 Homo sapiens chromosome 8, clone RP11-374M4, complete sequence Length = 187351 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 tgaaaggagagagcttggatt 474 ||||||||||||||||||||| Sbjct: 9732 tgaaaggagagagcttggatt 9752
>gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosome 12, complete sequence Length = 220385 Score = 42.1 bits (21), Expect = 4.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 attgcttcctgatgattctgcaaag 536 |||||||| |||||||||||||||| Sbjct: 41328 attgcttcatgatgattctgcaaag 41352
>dbj|AB108672.1| Mus musculus Sox1 mRNA for transcriptional factor SOX1, complete cds Length = 1220 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 1131 ggccgccgcagccgctgccgc 1111
>dbj|AK120819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015E20, full insert sequence Length = 2975 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 386 gccgccgcagccgctgccgca 406
>dbj|AK120245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J21, full insert sequence Length = 5429 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 gccgccgcagccgctgccgca 194 ||||||||||||||||||||| Sbjct: 395 gccgccgcagccgctgccgca 415
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 42.1 bits (21), Expect = 4.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ggccgccgcagccgctgccgc 193 ||||||||||||||||||||| Sbjct: 756 ggccgccgcagccgctgccgc 736 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 209,820,563 Number of extensions: 11184173 Number of successful extensions: 221668 Number of sequences better than 10.0: 87 Number of HSP's gapped: 221665 Number of HSP's successfully gapped: 124 Length of query: 1138 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1115 Effective length of database: 18,503,978,556 Effective search space: 20631936089940 Effective search space used: 20631936089940 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
