ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76m10 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g29000:12001.t02591:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5599 Score = 404 bits (877), Expect(4) = e-129 Identities = 157/298 (52%), Positives = 212/298 (71%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+W T+++D+++FV C CQR G IT R MP+ +L ++ Sbjct: 3352 YGGHYGAFRTQAKIWQSGFFWSTMYEDSKEFVRRCTSCQRQGGITARDAMPLTNNLQVEI 3531 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MG FP S ++LVAVDYV+KWVEA+P AD + KM +IFPRFG P Sbjct: 3532 FDVWGIDFMGSFPKSRNCEYILVAVDYVSKWVEAMPCSAADARHARKMFIEIIFPRFGTP 3711 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQK VN+ Sbjct: 3712 RMVISDGGSHFIDKTFRDLLQEMGAKHNVATPYHPQTSGQAEKSNKQIKNILQKTVNKMG 3891 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L DALWAY TAYK P+GMSPY++VYGK+C +ELEH+AYWAI+ N DF+ AG Sbjct: 3892 T*WKDRLPDALWAYQTAYKTPIGMSPYQIVYGKSCRLHVELEHRAYWAIRNWNMDFEGAG 4071 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFFA 1335 E I+ L+EWR +AY N K++KE+ KRWHDKR++ ++F GD VL++NSR++ F+ Sbjct: 4072 EWRKMQIAELEEWREKAYNNEKIYKERTKRWHDKRVKIKKFKPGDKVLMFNSRVKLFS 4245 Score = 46.4 bits (95), Expect(4) = e-129 Identities = 14/48 (29%), Positives = 31/48 (64%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQKCHSKP 442 + ++K ++ R + WD+P+LY+ DG+++R + +I++ CH+ P Sbjct: 3208 ENQRKLKYESRRHIWDEPYLYRVCSDGLLQRCVSTDGLKIIE*CHASP 3351 Score = 40.0 bits (81), Expect(4) = e-129 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PWYA+ NY+V+KYIPP ++ K Sbjct: 3148 SNPWYANIVNYMVSKYIPPGENQRKLK 3228 Score = 33.6 bits (67), Expect(4) = e-129 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + N +V Sbjct: 4240 FSHGKLHSKWEGPFDVIDTSSHGAITLRDDSCNIFKV 4350 Score = 95.0 bits (201), Expect(3) = 3e-35 Identities = 58/118 (49%), Positives = 66/118 (55%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L RK MK EP S+I LG Sbjct: 3884 LLTVFCRIFLICLFDFSA*PLVCGW*GVATLCLAPISCRRSRKVLSMK*EPPSLITILGV 3705 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIASTHL T*STAT+ +LG PI S P+TSN Sbjct: 3704 PNLGKMISMNIFLACLASAALHGIASTHLET*STATRMYSQLRDLGKDPIKSIPQTSN 3531 Score = 63.4 bits (132), Expect(3) = 3e-35 Identities = 42/97 (43%), Positives = 48/97 (49%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN LSC SL + A+ LHSS+ I SPA Sbjct: 4241 KSLTLELNISTLSPGLNFLIFTLLSCQRFVLSLYIFSLL*AFSLHSSSSAICIFLHSPAP 4062 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS P*TI YGD+PMG Sbjct: 4061 SKSMFQFLMAQYALCSSSTCSRHDFP*TI*YGDIPMG 3951 Score = 30.4 bits (60), Expect(3) = 3e-35 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S V Q KP C L V + +PP* Sbjct: 3503 GIASRAVIPPCLWQLVHLLTNSFESSYIVDQKKPLCQILAWVRNAP*WPP* 3351 Score = 118 bits (253), Expect(2) = 3e-27 Identities = 76/271 (28%), Positives = 131/271 (48%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E Y FV+P+L F L +++ L SPF +++ + +I V + D Sbjct: 4215 QYFVSWLEFLDFYPFVMPALRPFFVYLFVVVGLLSPFFKFSNLHFSPFSCSLKIHVPVSD 4036 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + + T L+I++ I H++G L C+ + P S +D LL*+ Sbjct: 4035 GPVCSVLKFYMQST*LSIDYLIWGHSNGCLIRCLVCPQCVRQSILPSCSHFVDRLL*NIL 3856 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + LTT L M+R + + L ++E +NE+ T +++ R +KSWE D ++ Sbjct: 3855 DLFVRFFCLTTGLWMVRSGHIVFGSHLL*EVSEGFVNEMRTSVTYNHPRGTKSWEDDFYE 3676 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 HL G I + SL PL D++ + +V RE SH + +I++ N + + H Sbjct: 3675 HLPGMPRICGAARHSLNPLGDIVDCHQNVLAVARLRERSHKVYTPNIEYLNLQIVCKGHC 3496 Query: 585 LTLSDIPYSLAFVTRQDKLTGILEESGPIET 493 + SD LA D+ + P ET Sbjct: 3495 IASSDSSLPLAACASSDEFF*VFVHC*PEET 3403 Score = 32.2 bits (64), Expect(2) = 3e-27 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -1 / -2 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY IV +GIPR Sbjct: 3201 WYVLGYHIVYYVGIPR 3154 Score = 30.4 bits (60), Expect(3) = 3e-05 Identities = 26/85 (30%), Positives = 36/85 (42%) Frame = +2 / +2 Query: 893 LLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWF 1072 LL I VVK +S Y+R S E G + H G IR P C I+ Sbjct: 3803 LLTIHRPVVKQKNRTNKSRIFYRRRSTKWEHDGRIDCRTHCGHTRQRIRHPLECPHIR*S 3982 Query: 1073 MVRPVISLLSWNTKLIGQSKSSTLI 1147 M V + + +T+ G S++ T I Sbjct: 3983 MESHVDCM*NLSTEHTGPSETGTWI 4057 Score = 29.0 bits (57), Expect(3) = 3e-05 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 / +3 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A FLL ++++ + + ++P+ R H + NA * I CLG LYG Sbjct: 3387 QNLAKWFLLVNNVRRLKRIRQKMHKLPEARRNHCSRCNAPYKQFAS*DIRCLGYRLYGIF 3566 Query: 657 P 659 P Sbjct: 3567 P 3569 Score = 26.3 bits (51), Expect(3) = 3e-05 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P* * RF+ H Sbjct: 3684 NHLPKIWYP*DGYK*RRFSFH 3746
>LOC_Os03g41624:12003.t03573:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4447 Score = 395 bits (856), Expect(4) = e-125 Identities = 154/297 (51%), Positives = 208/297 (70%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+++FV C CQR G IT R MP+ Y+L ++ Sbjct: 3356 YGGHYGVFRTQAKIWQSGFFWPTMYEDSKEFVRRCTSCQRQGGITARDAMPLTYNLQVEI 3535 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWV+A+P D + KM +IFP+F P Sbjct: 3536 FDVWGIDFMGPFPKSRNCEYILVAVDYVSKWVKAMPCSATDARHAKKMFIEIIFPKFDTP 3715 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQK VN+ Sbjct: 3716 RMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMG 3895 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L DAL AY AYK P+ MSPY++VY K C P+ELEH+AYWAI+ N DF+ AG Sbjct: 3896 TGWKDRLPDALCAYWIAYKTPIRMSPYQIVYRKPCRLPVELEHRAYWAIRNWNMDFEGAG 4075 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 E I+ L+EWR +AY NAK++KE+ KRWHDKR + ++F GD VL++NSR++ F Sbjct: 4076 EWRKMQIAELEEWREKAYHNAKIYKERTKRWHDKRKKIKKFKPGDKVLMFNSRVKLF 4246 Score = 39.1 bits (79), Expect(4) = e-125 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++ ++ R + WD+P+LY+ DG++RR E+G Sbjct: 3209 KNQRNLKYESRRHIWDEPYLYRVCSDGLLRRCVPTEEG 3322 Score = 38.2 bits (77), Expect(4) = e-125 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 / +2 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA+ NY+V KYIPP Sbjct: 3149 SNPWYANIVNYMVFKYIPP 3205 Score = 36.3 bits (73), Expect(4) = e-125 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + GN +V Sbjct: 4244 FGHGKLRSKWEGPFDVIDTSSHGAITLRDELGNIFKV 4354 Score = 84.5 bits (178), Expect(3) = 2e-31 Identities = 53/118 (44%), Positives = 63/118 (53%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S PL G *G ATL L RK MK EP S++ LG Sbjct: 3888 LLTVFCRIFLICLFDVSACPLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGV 3709 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 NLG M ++I + S L GIA THL T*STAT+ +LG GP+ S P+TSN Sbjct: 3708 SNLGKMISMNIFLACLASVALHGIALTHLET*STATRMYSQLRDLGKGPMKSIPQTSN 3535 Score = 60.6 bits (126), Expect(3) = 2e-31 Identities = 42/97 (43%), Positives = 47/97 (48%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN LSC SL A A+ LHSS+ I SPA Sbjct: 4245 KSLTLELNISTLSPGLNFLIFFLLSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 4066 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G *TI YGD+ MG Sbjct: 4065 SKSMFQFLMAQYALCSSSTGSRHGFL*TI*YGDILMG 3955 Score = 30.9 bits (61), Expect(3) = 2e-31 Identities = 22/51 (43%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + PP* Sbjct: 3507 GIASRAVIPPCLWQLVHLLTNSFESSYIVGQKKPLCQILAWVRNTP**PP* 3355 Score = 105 bits (225), Expect(2) = 1e-22 Identities = 74/274 (27%), Positives = 128/274 (46%) Frame = -2 / -1 Query: 1299 IITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCP 1120 +++++E L+ FV+P+L F L +++ L SPF+ +D+ + +I V + D P Sbjct: 4213 LVSWLEFLDLFPFVMPALRSFFVYLCVVVSLFSPFLKFSDLHFSPFSSSLKIHVPIPDGP 4034 Query: 1119 ISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDL 940 + V + L +N+ I H++G L C+ + P S ID LL + DL Sbjct: 4033 VCSVLKFYG*SAWLPVNYLIWGHSNGCLVCYPVCTQCVRQSILPSCSHFIDRLLQNILDL 3854 Query: 939 PITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHL 760 + L+T L M+R + + S ++E +NEV T +++ S K E D ++HL Sbjct: 3853 FV*CFCLSTGLWMVRSGHIVFGSHFS*EVSEGFVNEVRTSVTYDHSGGIKFREDDFYEHL 3674 Query: 759 NGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLT 580 G I + SL PL D++ + +V RE SH + +I++ + + + H + Sbjct: 3673 LGMPRIRSAARHSLNPLGDIVDCHQNVLAVARLRERSHEVYTPNIEYLDLQIVCEGHCIA 3494 Query: 579 LSDIPYSLAFVTRQDKLTGILEESGPIET*LQYL 478 SD LA D+ + P ET L L Sbjct: 3493 SSDSSLPLAAGASSDEFF*VFVHCWPEETTLPNL 3392 Score = 29.5 bits (58), Expect(2) = 1e-22 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -2 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 3204 GGMYLNTM*FTMLAYHG 3154
>LOC_Os11g32200:12011.t02817:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2037 Score = 401 bits (870), Expect(4) = e-124 Identities = 155/297 (52%), Positives = 210/297 (70%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+++FV C CQR G IT R P+ Y+L ++ Sbjct: 955 YGGHYGAFRT*AKIWQSGFFWPTMYEDSKEFVRRCTSCQRQGGITARDAKPLTYNLQVEI 1134 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+ GPFP S ++LVAVDYV+KWVEA+ AD + KM I PRFG P Sbjct: 1135 FDVWGIDFTGPFPKSRNCEYILVAVDYVSKWVEAMSCSAADARHAKKMFTETILPRFGTP 1314 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI FR +L + H +A+PYHPQ+SGQ E SN++IK ILQK VN+ Sbjct: 1315 RMVISDGGSHFIDKTFRDLLREMGAKHNMATPYHPQTSGQAETSNKQIKNILQKTVNKMG 1494 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L ALWAY TAYK P+GMSPY++VYGK+C P+ELEH+AYWAI+ N DF+ AG Sbjct: 1495 TGWKDRLPYALWAYRTAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNWNMDFEGAG 1674 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 E I+ L+EW+ +AY NAK++KE+ KRWH+KRI+ ++F GD VL++NSR++ F Sbjct: 1675 EWRKMQIAELEEWKEKAYYNAKIYKERTKRWHEKRIKIKKFKPGDKVLIFNSRVKLF 1845 Score = 37.3 bits (75), Expect(4) = e-124 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 / +1 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ R + WD+P+LY+ DG++RR ++G Sbjct: 820 KLKYESRRHIWDEPYLYRVCSDGLLRRCVLTDEG 921 Score = 35.4 bits (71), Expect(4) = e-124 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 / +1 Query: 239 WYADYANYIVAKYIPP 286 WYA+ NY+V+KYIPP Sbjct: 757 WYANIVNYMVSKYIPP 804 Score = 33.1 bits (66), Expect(4) = e-124 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ + + GAI + + GN +V Sbjct: 1855 KLRSKWEGPFDVIDTSSHGAITLCDDSGNIFKV 1953 Score = 90.0 bits (190), Expect(3) = 4e-35 Identities = 55/118 (46%), Positives = 65/118 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G A L L RK MK EP S++ LG Sbjct: 1487 LLTVFCRIFLICLFDVSA*PLVCGW*GVAILCLAPISRRRSRKVLSMK*EPPSLMTILGV 1308 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L IASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 1307 PNLGKMVSVNIFLACLASAALHDIASTHLET*STATRMYSQLRDLGKGPVKSIPQTSN 1134 Score = 67.0 bits (140), Expect(3) = 4e-35 Identities = 43/97 (44%), Positives = 48/97 (49%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I SC SL A A+ HSS+ I SPA Sbjct: 1844 KSLTLELNISTLSPGLNFLILILFSCQRFVLSLYIFAL**AFSFHSSSSAICIFLHSPAP 1665 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 1664 SKSMFQFLMAQYALCSSSTGSRHDFP*TI*YGDIPMG 1554 Score = 31.3 bits (62), Expect(3) = 4e-35 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 G + R VI P LW TN S VGQ KP C L V + +PP* Sbjct: 1106 GFASRAVIPPCLWQLVHLLTNSFESSYIVGQKKPLCQILA*VRNAP*WPP* 954 Score = 74.4 bits (156), Expect(2) = 7e-13 Identities = 64/271 (23%), Positives = 120/271 (44%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E SF +P+L F +++ L PF +++ + +I V + D Sbjct: 1818 QYFVSWLEFLDFDSFFMPALRPFFVYFRVVVGLLFPFFKFSNLHFSPFSRSLKIHVPIPD 1639 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ + + T L +++ I H++G L + + P S +D LL + Sbjct: 1638 GPVCSMLKFYG*ST*LPVDYLIWGHSNGCLVRCSVCPQRVRQSILPSCSHFVDRLLQNIL 1459 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + LTT L M+R + + LS ++E +NE+ T I++ S +KSW + Sbjct: 1458 DLFVRCFCLTTGLWMVRSGHIVFGSHLS*EVSEGFVNEMRTSITYDHSGGTKSW*DGFCE 1279 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 HL G I + SL PL D++ + +V R+ S + +I++ + + + Sbjct: 1278 HLLGMPRIRSTARHSLNPLGDIVDCHQNVLAVARLRKRSRKVYTPNIEYLDLQIVCKGLC 1099 Query: 585 LTLSDIPYSLAFVTRQDKLTGILEESGPIET 493 + SD LA ++ + P ET Sbjct: 1098 IASSDSSLPLAASASSNEFF*VFIHCWPEET 1006 Score = 26.7 bits (52), Expect(2) = 7e-13 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -2 / -2 Query: 285 GGMYLATI*FA*SAYH 238 GGMYL T+*F AYH Sbjct: 803 GGMYLDTM*FTMLAYH 756
>LOC_Os06g32180:12006.t02916:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1657 Score = 255 bits (551), Expect(5) = e-124 Identities = 97/175 (55%), Positives = 127/175 (72%) Frame = +1 / +2 Query: 808 LMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKN 987 +++D GSHFI FR L + H +A+PYHPQ+SG E SN++IK ILQK VN K Sbjct: 635 VISDGGSHFIDKTFRNFLQELGAQHNIATPYHPQTSG*AETSNKQIKNILQKTVNEMGKA 814 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEK 1167 W +KL DALWAY TAYK P+GMSPY++VYGK C+FP+ELEH+A+WAI+ N D G+ Sbjct: 815 WKNKLPDALWAYRTAYKTPIGMSPYQLVYGKTCHFPVELEHRAHWAIRTWNMDLTGPGQH 994 Query: 1168 WLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 S L+EWR +AY NAK++K++ KRWHDKRI+ +EF GD VLL+NSR++ F Sbjct: 995 RKMQHSELEEWRDKAYHNAKIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSRVKLF 1159 Score = 159 bits (342), Expect(5) = e-124 Identities = 61/120 (50%), Positives = 83/120 (69%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT++ D ++FV C CQ+ G IT R MP+ Y+L ++ Sbjct: 268 YGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKHGGITARDAMPLTYNLQVEL 447 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G ++MGPFP S ++LVAVDYV+KWVEAIP + AD + +M +IFPRFG P Sbjct: 448 FDVWGINFMGPFPKSYDCEYILVAVDYVSKWVEAIPCRAADAKHARRMFHEIIFPRFGTP 627 Score = 40.9 bits (83), Expect(5) = e-124 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GPY + + GA+ + + EGN +V Sbjct: 1157 FGHGKLRSKWMGPYTVVDASSQGAVTLRDNEGNIFKV 1267 Score = 38.6 bits (78), Expect(5) = e-124 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ + R + WD P+LY+ DG++RR ++G Sbjct: 121 ENKKRLIYKSRGHLWDAPYLYRVYSDGLLRRCVPVDKG 234 Score = 29.5 bits (58), Expect(5) = e-124 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++VA ++PP Sbjct: 43 LLKVIDSDSWYATIVNFMVAGHVPP 117 Score = 81.3 bits (171), Expect(3) = 2e-26 Identities = 54/163 (33%), Positives = 80/163 (49%) Frame = -2 / -1 Query: 1317 RIV*QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKV 1138 RI Q ++ EL L V+PS L LGI+I L PF * + P+L+G I V Sbjct: 1144 RIEQQHLVPCFELLVLDPLVMPSFGSILVDLGIVIGLVPPFF*LRVLHLPVLSGSR*IHV 965 Query: 1137 ELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL 958 D P+ VFQL ++T L+++ + *HA G L CI P L ID LL Sbjct: 964 PSPDSPVRPVFQLYWKVTSLSVDKLVW*HADGRLISSPICPKCIR*LVLPCLPHLIDSLL 785 Query: 957 *DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV 829 + DL + + L+T L MI N ++ + ++E ++E+ Sbjct: 784 QNVLDLFVARFCLSTCLGMIWSGNVVLSPKFLQKVSEGLIDEM 656 Score = 46.9 bits (96), Expect(3) = 2e-26 Identities = 27/60 (45%), Positives = 32/60 (53%) Frame = -3 / -3 Query: 800 GTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 G P G + +I SA L GIASTHL T*STAT+ + G GP+ P TSN Sbjct: 626 GVPKRGKIISWNIRRACLASAALHGIASTHLDT*STATRIYSQS*DFGKGPMKLMPHTSN 447 Score = 30.9 bits (61), Expect(3) = 2e-26 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP 444 GI+ R VI P W +TN S VGQ P C VL+ PP Sbjct: 419 GIASRAVIPPCFWQLVHLRTNSFVSSYIVGQKNPLCQIFACVLNAP**PP 270 Score = 49.6 bits (102), Expect(2) = 5e-14 Identities = 27/48 (56%), Positives = 30/48 (62%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL + T SP LNS IRLSCHLL SL LA A LHSS+ Sbjct: 1158 KSFTRELNSSTLSPALNSLCLIRLSCHLLVLSL*ILAL**ALSLHSSS 1015 Score = 49.6 bits (102), Expect(2) = 5e-14 Identities = 22/29 (75%), Positives = 23/29 (79%) Frame = -3 / -2 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ ALCS+S GK*Q P*T YGDMPMG Sbjct: 954 IAQCALCSNSTGK*QVFP*TSWYGDMPMG 868 Score = 67.0 bits (140), Expect = 5e-10 Identities = 43/120 (35%), Positives = 55/120 (45%) Frame = +2 / +3 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSS 1138 +R S+ R G + MH+G +GLLIR P ACH R V SWNT G S Sbjct: 786 RRLSMRWGRHGRTSYLMHFGHIGLLIRRPSACHHTNLSTERLVTFQ*SWNTGRTGLSGLG 965 Query: 1139 TLISNLPVRSGCLISAH*MNGEPRHMRMPSCSRKRLRDGTTNEYKNESSM*VIMSCYTIL 1318 T I P +G + * NG R + MP +R +DG T+ SS C +IL Sbjct: 966 TWI*RDPDSTGRCSTLS*KNGGTRPITMPRSTRIEPKDGMTSGSSTRSSKQGTRCCCSIL 1145 Score = 41.4 bits (84), Expect(2) = 4e-06 Identities = 19/39 (48%), Positives = 24/39 (61%) Frame = +3 / +1 Query: 1008 CTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 CT+G+ DCL*++H HVT+ L L S GTQ LG Sbjct: 835 CTLGI*DCL*DAHRHVTIPTCLRKDLSLSSRVGTQGALG 951 Score = 30.9 bits (61), Expect(2) = 4e-06 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +3 / +1 Query: 1191 R*MENPGI*ECQVVQGKG*EMARQTNTKTRVQCR*LCPVIQFSFE 1325 R ME G+ +CQ +QG +MA Q + VQ R +QFS E Sbjct: 1018 RRMEGQGLSQCQDLQG*NQKMA*QADQAQGVQSRGQGAAVQFSGE 1152 Score = 46.0 bits (94), Expect = 0.001 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP +++ + + VTC W SYKQS+ P VH+ C Sbjct: 950 PSAPCVPTLLESDKSFRRQVGMVTCRWASYKQSYMPKVHQVAC 822
>LOC_Os05g22350:12005.t01896:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4271 Score = 390 bits (845), Expect(4) = e-123 Identities = 154/297 (51%), Positives = 207/297 (69%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+ PT+++ +++FV C CQR G IT R MP+ Y+L ++ Sbjct: 3183 YGGHYGAFRTQAKIWQSGFF*PTMYEVSKEFVRRCTSCQRQGGITARDAMPLTYNLQVEI 3362 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV D+MGPFP S ++LVAVDYV+KWVEA+P AD + M IFPRFG P Sbjct: 3363 FDVWDIDFMGPFPKSRNCKYILVAVDYVSKWVEAMPCSAADVRHAKNMFTETIFPRFGTP 3542 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI F+ +L + H VA+PYHPQ+SGQ E SN++IK ILQK V++ Sbjct: 3543 RMVISDGGSHFIDKTFQDLLREMGAKHIVATPYHPQTSGQAETSNKQIKNILQKTVDKMG 3722 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L DALWAY TAYK P+GMSPY++VYGK+C P+ELEH AYWAI+ N DF+ AG Sbjct: 3723 T*WKERLPDALWAYQTAYKTPVGMSPYQIVYGKSCRLPVELEHNAYWAIRNWNMDFEGAG 3902 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 + I+ DEWR +AY NAK+++E KRWHDK I+ ++F GD VL++NSR++ F Sbjct: 3903 KWRKIQIAEFDEWREKAYHNAKIYREWTKRWHDKIIKIKKFKPGDKVLMFNSRVKLF 4073 Score = 41.4 bits (84), Expect(4) = e-123 Identities = 13/38 (34%), Positives = 25/38 (65%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+P+LY+ DG++RR E+G Sbjct: 3036 ENQQKLKYESRRHIWDEPYLYRVCSDGLLRRCAPTEEG 3149 Score = 37.7 bits (76), Expect(4) = e-123 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +3 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + GN +V Sbjct: 4071 FGHGKLRSKWEGPFDVIDTSSHGAITLRDDSGNIFKV 4181 Score = 35.4 bits (71), Expect(4) = e-123 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PW+A+ NY+V+KYIP Q+ K Sbjct: 2976 SNPWFANIVNYMVSKYIPLGENQQKLK 3056 Score = 72.1 bits (151), Expect(4) = 6e-30 Identities = 37/72 (51%), Positives = 46/72 (63%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK EP S++ LG PNLG M ++I + SA L GIASTH T*STAT+ + +LG Sbjct: 3577 MK*EPPSLMTILGVPNLGKMVSVNIFLACLTSAALHGIASTHFET*STATRMYLQLRDLG 3398 Query: 656 NGPI*SKPETSN 621 GPI S +TSN Sbjct: 3397 KGPIKSISQTSN 3362 Score = 64.8 bits (135), Expect(4) = 6e-30 Identities = 43/97 (44%), Positives = 47/97 (48%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I LSC SL A A+ LHSSN I PA Sbjct: 4072 KSLTLELNISTLSPGLNFLILIILSCQRFVHSLYIFALW*AFSLHSSNSAICIFLHFPAP 3893 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P TI YGD+P G Sbjct: 3892 SKSMFQFLMAQYALCSSSTGNRHDFPYTI*YGDIPTG 3782 Score = 28.1 bits (55), Expect(4) = 6e-30 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN + VG KP C L V + +PP* Sbjct: 3334 GIASRAVIPPCLWQLVHLLTNSFETSYIVG*KKPLCQILAWVRNAP*WPP* 3182 Score = 23.1 bits (44), Expect(4) = 6e-30 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWL 876 L T+FCR S *PL G *G AT+ L Sbjct: 3715 LSTVFCRIFLICLFDVSA*PLVCGW*GVATMCL 3617 Score = 90.9 bits (192), Expect(2) = 6e-18 Identities = 66/258 (25%), Positives = 119/258 (46%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E FV+P+L F L +++ L PFI +++ + +I V + D Sbjct: 4046 QYFVSWLEFLDFDYFVMPALRPFSVYLRVVVSLLPPFIKFSNLYFSPFSCSLKIHVPIPD 3867 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + T + + I H++G L C+ + P S +D LL + Sbjct: 3866 GPVCVVLKFYG*ST*FPVYYLIWGHSNGCLVRCLVCPQCVWQSFLPSCSHFVDRLLQNIL 3687 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + LTT L M+R +++ LS + E +NE+ T +++ +KSWE + Sbjct: 3686 DLFVRCFCLTTGLWMVRSGHNVFGSHLS*EVLEGFVNEMRTSVTYDHPGSTKSWEDGFCE 3507 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 H+ G I + SL PL D++ + +V R+ SH + +I++ N + + H Sbjct: 3506 HILGMSHIRGAARHSLNPLRDIVDCHQNVLAVARLRKRSHKVYIPNIEYLNLQIVRKGHC 3327 Query: 585 LTLSDIPYSLAFVTRQDK 532 + SD LA D+ Sbjct: 3326 IASSDSSLPLAACASSDE 3273 Score = 28.6 bits (56), Expect(2) = 6e-18 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +G PR Sbjct: 3029 WYVLGYHVVYYVGKPR 2982 Score = 31.8 bits (63), Expect(2) = 9.9 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +3 / +2 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGT 653 Q +A FLLA +++ + + ++P+ R H + NA + * I CLG LYGT Sbjct: 3218 QNLAKWFLLADNVRSLKRIRQKMHKLPEARRNHCSRCNAPYVQFAS*DIRCLGYRLYGT 3394 Score = 24.9 bits (48), Expect(2) = 9.9 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 / +2 Query: 238 VVCRLCKLYRSQIHTTQ 288 VVC+ KL+ Q+HTT+ Sbjct: 2984 VVCQHSKLHGIQVHTTR 3034
>LOC_Os08g21434:12008.t01938:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3854 Score = 257 bits (556), Expect(5) = e-123 Identities = 100/183 (54%), Positives = 133/183 (72%) Frame = +1 / +3 Query: 784 PRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQK 963 P+ P +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQK Sbjct: 1422 PKIWYPGMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETSNKQIKNILQK 1601 Query: 964 IVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNF 1143 VN+ W +L DALWAY TAYK P+GMSPY++VYGK+C P+ELEH+AYWAI+ N Sbjct: 1602 TVNKMGTGWKDRLPDALWAYRTAYKTPIGMSPYQIVYGKSC*LPVELEHRAYWAIRNWNM 1781 Query: 1144 DFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRL 1323 DF+ AGE I+ L+EWR +AY NAK++KE+ K WHDKRI+ ++F GD VL++NSR+ Sbjct: 1782 DFEGAGEWRKM*IAELEEWREKAYHNAKIYKERTKCWHDKRIEIKKF*PGDKVLMFNSRV 1961 Query: 1324 RFF 1332 + F Sbjct: 1962 KLF 1970 Score = 152 bits (326), Expect(5) = e-123 Identities = 62/122 (50%), Positives = 81/122 (66%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG + RT K+ QSGF+ PT+++D+++FV C QR G IT R MP+ Y+L I+ Sbjct: 1081 YGGQYGAFRTQAKIWQSGFF*PTMYEDSKEFVRRCTSYQRQGGITARDAMPLTYNLQIEI 1260 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEAIP D + KM +IFPRFG P Sbjct: 1261 FDV*GIDFMGPFPKSRNCEYILVAVDYVSKWVEAIPCTATDAKHAKKMFTEIIFPRFGTP 1440 Query: 802 RY 807 + Sbjct: 1441 EW 1446 Score = 39.6 bits (80), Expect(5) = e-123 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA+ NY+V+KYIPP Sbjct: 874 SNPWYANIVNYMVSKYIPP 930 Score = 37.7 bits (76), Expect(5) = e-123 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +3 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + GN +V Sbjct: 1968 FGHGKLRSKWEGPFNVIDTSLQGAITLRDDSGNIFKV 2078 Score = 35.4 bits (71), Expect(5) = e-123 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + K+K ++ R + D+P+LY+ DG++RR ++G Sbjct: 934 ENKRKLKYESRRHI*DEPYLYRVCSDGLLRRCVPTDEG 1047 Score = 63.4 bits (132), Expect(4) = 3e-30 Identities = 43/97 (44%), Positives = 48/97 (49%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+ EL T SP N I LSC SL A A+ LHSS+ I SPA Sbjct: 1969 KSFTLELNISTLSPG*NFLISILLSCQHFVRSLYIFALW*AFSLHSSSSAIYIFLHSPAP 1790 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 1789 SKSMFQFLMAQYALCSSSTGSQHDFP*TI*YGDIPMG 1679 Score = 58.3 bits (121), Expect(4) = 3e-30 Identities = 29/60 (48%), Positives = 38/60 (63%) Frame = -3 / -1 Query: 800 GTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 G PNLG + ++I + + S + GIASTHL T*STAT+ +LG GP+ S P TSN Sbjct: 1439 GVPNLGKIISVNIFLACFASVAVHGIASTHLET*STATRMYSQLRDLGKGPMKSIPHTSN 1260 Score = 34.5 bits (69), Expect(4) = 3e-30 Identities = 22/51 (43%), Positives = 26/51 (50%) Frame = -3 / -1 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + ++PP* Sbjct: 1232 GIASRAVIPPCLW*LVHLLTNSFESSYIVGQKKPLCQILAWVRNAPYWPP* 1080 Score = 32.7 bits (65), Expect(4) = 3e-30 Identities = 26/64 (40%), Positives = 29/64 (45%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L K MK EP S++ G Sbjct: 1612 LLTVFCRIFLICLFDVSA*PLVCGW*GVATLCLAPISRRRSLKVLSMK*EPPSLMTIPGY 1433 Query: 794 PNLG 783 LG Sbjct: 1432 QILG 1421 Score = 66.1 bits (138), Expect(3) = 5e-17 Identities = 45/165 (27%), Positives = 81/165 (49%) Frame = -2 / -1 Query: 1296 ITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPI 1117 ++++E SFV+P+L F L I++ L SPF+ +D+ + +I V + D P+ Sbjct: 1934 VSWLEFLDFNSFVMPALRPFFIYLRIVVSLLSPFLKFSDLHFSPFSCSLKIHVPIPDGPV 1755 Query: 1116 SFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLP 937 + + T L +++ I H++G L C+ + P S +D LL + DL Sbjct: 1754 CSMLKFYG*ST*LPVDYLIWGHSNGCLVCCPVSPQCVRQSILPSCSHFVDCLLQNILDLF 1575 Query: 936 ITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQIS 802 + LTT L M+R + + S ++E +NEV T +++ S Sbjct: 1574 VRCFCLTTGLWMVRSGHVVFGSHFS*KVSEGFVNEVRTSVTYDHS 1440 Score = 43.2 bits (88), Expect(3) = 5e-17 Identities = 26/90 (28%), Positives = 42/90 (46%) Frame = -2 / -3 Query: 801 RDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIK 622 R +KSWE + +HL G + I + SL PL D++ + +V RE SH + IK Sbjct: 1440 RGTKSWEDNFCEHLLGMLRIRGGARYSLNPLGDIVDCHQNVLAVARLRERSHEVYTSHIK 1261 Query: 621 WFNDK*IVHRHFLTLSDIPYSLAFVTRQDK 532 + + + + H + SD L D+ Sbjct: 1260 YLDLQIVCEGHCIASSDSSLPLVACASSDE 1171 Score = 29.5 bits (58), Expect(3) = 5e-17 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -1 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 929 GGMYLDTM*FTMLAYHG 879
>LOC_Os08g05060:12008.t00400:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5524 Score = 258 bits (557), Expect(5) = e-119 Identities = 99/183 (54%), Positives = 132/183 (72%) Frame = +1 / +2 Query: 784 PRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQK 963 PRFG PR +++D GSHFI FR L + H +A+PY P +SGQ E SN++IK ILQK Sbjct: 4778 PRFGTPRMMISD*GSHFIDKTFRNFLQELGAQHNIATPYRP*TSGQAETSNKQIKNILQK 4957 Query: 964 IVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNF 1143 IVN K W +KL DALWAY TAY+ P+GMSPY++VYGK C+ P+ELEH+A+ AI+ N Sbjct: 4958 IVNEMGKAWKNKLPDALWAYRTAYETPIGMSPYQLVYGKTCHLPIELEHRAHCAIRTWNI 5137 Query: 1144 DFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRL 1323 D K AG+ +S L+EWR +AY NAK++K++ KRWHDKRI+ ++F GD VLL+N + Sbjct: 5138 DLKGAGQHRKMQLSELEEWRDKAYHNAKIYKDRTKRWHDKRIKLKKFKAGDKVLLFNCWV 5317 Query: 1324 RFF 1332 + F Sbjct: 5318 KLF 5326 Score = 137 bits (294), Expect(5) = e-119 Identities = 52/114 (45%), Positives = 77/114 (67%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WP+++ D ++F+ C CQ+ G IT R MP+ Y+L ++ Sbjct: 4437 YGGHYGEFRTHAKI*QSGFFWPSMYDDTKEFIRICTRCQKHGGITARDAMPLIYNLQVEL 4616 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIF 783 FDV G D+MGPFP S +++V VDYV+KWVEA+P + AD + +M +IF Sbjct: 4617 FDVWGIDFMGPFPKSYDCEYIIVVVDYVSKWVEAMPCRAADTKHARRMFHEIIF 4778 Score = 41.8 bits (85), Expect(5) = e-119 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ ++ R + WD P+LY+ DG++RR ++G Sbjct: 4290 ENKKRLIYESRSHLWDAPYLYRVCSDGLLRRCVSADEG 4403 Score = 40.0 bits (81), Expect(5) = e-119 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GPY + + GA+ + + EGN +V Sbjct: 5324 FGHGKLRSKWMGPYTVIDASSHGAVTLRDNEGNIFKV 5434 Score = 29.5 bits (58), Expect(5) = e-119 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = +2 / +3 Query: 236 PWYADYANYIVAKYIPP 286 PWY N++VA ++PP Sbjct: 4236 PWYVTIVNFMVAGHVPP 4286 Score = 80.3 bits (169), Expect(2) = 3e-21 Identities = 51/173 (29%), Positives = 86/173 (49%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++ +E L V+PS L L I++ L PF+ ++ P+L+G + V D Sbjct: 5299 QHLVPSLEFFELDPLVMPSFCSVLIDLSIVVGLVPPFLQLRELHFPVLSGSL*VYVPSPD 5120 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 + VFQL R++T L I+ + *HA G L CI P LS +D+ L + Sbjct: 5119 STVRPVFQLYRKVTSLPIDKLVW*HADGRLISSPICPKCIR*LVLPCLSHLVDNFLQNIL 4940 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKS 787 DL +T L+T L IR N ++ + ++E ++E+ ++++ R SK+ Sbjct: 4939 DLFVTCFCLSTCLGTIRSGNVVLSPKFLQKVSEGLIDEMRPLVTYHHPRSSKT 4781 Score = 43.2 bits (88), Expect(2) = 3e-21 Identities = 23/41 (56%), Positives = 25/41 (60%) Frame = -3 / -1 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*ST T + G GP+ S P TSN Sbjct: 4738 SAALHGIASTHLDT*STTTMIYSQS*DFGKGPMKSMPHTSN 4616 Score = 49.6 bits (102), Expect(4) = 2e-17 Identities = 24/40 (60%), Positives = 25/40 (62%) Frame = -3 / -2 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCSSS G+*Q P*T YGDMPMG Sbjct: 5154 PAPFKSMFQVRIAQCALCSSSIGR*QVFP*TSWYGDMPMG 5035 Score = 42.3 bits (86), Expect(4) = 2e-17 Identities = 23/48 (47%), Positives = 28/48 (58%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ ++L + T SP LN IRLSCHL SL LA A LHSS+ Sbjct: 5325 KSFTQQLNSSTLSPALNFLSLIRLSCHLFVLSL*ILALW*ALSLHSSS 5182 Score = 28.6 bits (56), Expect(4) = 2e-17 Identities = 24/63 (38%), Positives = 26/63 (41%) Frame = -3 / -2 Query: 971 LTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTP 792 LTIFCR S PL *G G A L RK MK +P S+I G P Sbjct: 4965 LTIFCRIFLICLLLVSACPLV*GRYGVAMLC*APSSCKKFRKVLSMK*DP*SLIIIRGVP 4786 Query: 791 NLG 783 G Sbjct: 4785 KRG 4777 Score = 24.0 bits (46), Expect(4) = 2e-17 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 / -2 Query: 721 PLPT**RNPQQLRRECTHWNSGMVPYNQSPRHQM 620 PLPT + + L +H G VP ++ P HQ+ Sbjct: 4716 PLPTWTHSQRPL*YTRSHRTLGKVP*SRCPTHQI 4615 Score = 46.9 bits (96), Expect = 6e-04 Identities = 28/75 (37%), Positives = 37/75 (49%) Frame = +2 / +3 Query: 887 LHLLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIK 1066 L L I+ V + V +S ++ S ER G + MH+G +GLL+R P ACH Sbjct: 4881 LPLRIVPRQVDRQKQVTNKSRIFCRKLSTRWERHGRTSYLMHFGHIGLLMRRPSACHHTN 5060 Query: 1067 WFMVRPVISLLSWNT 1111 M R V SWNT Sbjct: 5061 LSMGRLVTFR*SWNT 5105 Score = 46.0 bits (94), Expect = 0.001 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -1 / -3 Query: 1111 CVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 CVPA ++ H+ VTC W S+KQS+ P VH+ C Sbjct: 5105 CVPALSEGDKSSHRQVGMVTCRWASHKQSYMPKVHQVAC 4989 Score = 43.2 bits (88), Expect = 0.008 Identities = 19/38 (50%), Positives = 24/38 (63%) Frame = +3 / +1 Query: 1008 CTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLL 1121 CT+G+ DCL*++H HVT+ LW L AGTQ L Sbjct: 5002 CTLGI*DCL*DAHRHVTIPTCLWEDLSPSDRAGTQGAL 5115
>LOC_Os09g07430:12009.t00539:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4746 Score = 375 bits (813), Expect(4) = e-118 Identities = 146/282 (51%), Positives = 194/282 (68%) Frame = +1 / +3 Query: 487 QSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSS 666 QSGF+ PT+++D+++FV C CQR G IT R MP+ Y+L ++ FDV G D M PFP S Sbjct: 2490 QSGFFSPTMYEDSKEFVRRCTSCQRQGGITTRDAMPLTYNLQVEIFDVWGIDLMEPFPKS 2669 Query: 667 NGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGV 846 ++LVAVDY++KWVEA+P D + KM +IFPRFG PR +++D GSHFI Sbjct: 2670 RNCEYILVAVDYLSKWVEAMPCNTVDAKHAKKMFTEIIFPRFGTPRMVISDRGSHFIDKT 2849 Query: 847 FRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYG 1026 FR +L H VA PYHPQ+ GQ E SN++IK ILQK VN W +L DALWAY Sbjct: 2850 FRDLLRDMGAKHNVAIPYHPQTKGQTETSNKQIKNILQKTVNNMGTGWKDRLPDALWAYR 3029 Query: 1027 TAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRT 1206 TAYK P+GM PY++VYGK+C P+ELE++AYWAI+ N DF+ AGE I+ L+EWR Sbjct: 3030 TAYKTPIGMCPYQIVYGKSCRLPVELEYRAYWAIRNWNMDFEGAGEWRKMQIAELEEWRE 3209 Query: 1207 QAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 +AY N ++KE+ K WHDKRI+ ++F D VL++NSR++ F Sbjct: 3210 KAYHNTNIYKERTKHWHDKRIKIKKFKPEDKVLMFNSRVKLF 3335 Score = 38.6 bits (78), Expect(4) = e-118 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 / +2 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA NY+V+KYIPP Sbjct: 2237 SNPWYATIVNYMVSKYIPP 2293 Score = 38.2 bits (77), Expect(4) = e-118 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++ ++ + WD+P+LY+ DG++RR E+G Sbjct: 2297 ENQRNLKYESHRHIWDEPYLYRVCTDGLLRRCVPTEEG 2410 Score = 33.6 bits (67), Expect(4) = e-118 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ I + GAI + GN +V Sbjct: 3345 KLRSKWEGPFDIIDTSSHGAITLRYDSGNIFKV 3443 Score = 89.0 bits (188), Expect(2) = 1e-26 Identities = 55/118 (46%), Positives = 65/118 (55%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L RK MK EP S++ LG Sbjct: 2977 LLTVFCRIFLICLFDVSV*PLVCGW*GMATLCLAPISRRRSRKVLSMK*EPLSLMTILGV 2798 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + + S L GIASTHL *STAT+ +LG G I S P+TSN Sbjct: 2797 PNLGKMISVNIFLACFASTVLHGIASTHLER*STATRMYSQLRDLGKGSIKSIPQTSN 2624 Score = 52.8 bits (109), Expect(2) = 1e-26 Identities = 40/97 (41%), Positives = 45/97 (46%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T S LN I LSC SL A+ LHSS+ I SPA Sbjct: 3334 KSLTLELNINTLSSGLNFLIFILLSCQCFVLSLYMFVL**AFSLHSSSSAICIFLHSPAP 3155 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ AL SSS G P*TI G +PMG Sbjct: 3154 SKSIFQFLMAQYALYSSSTGSRHDFP*TI**GHIPMG 3044 Score = 112 bits (239), Expect(2) = 1e-24 Identities = 69/258 (26%), Positives = 125/258 (48%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q + ++E Y F++P L F + ++I L SPF +++ + F++ + + + Sbjct: 3308 QYFVFWLEFLDFYPFIMPVLRPFFVYVRVVISLLSPFFKFSNLHFSPFSCSFKVHIPVPN 3129 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 PI + + RE +++ I H++G L C+ + P S +D LL + Sbjct: 3128 GPICSILEFYRESA*FPVDYLIGAHSNGCLVCCPVCPQCVWQSILPSCSHIVDRLLQNIL 2949 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL I LT L M+R + + +S ++E ++EV T +++ R +KSWE D + Sbjct: 2948 DLFIRCFCLTLGLWMVRNGHIVFGSHIS*EVSEGFVDEVRTSVTYDHPRGTKSWEDDFCE 2769 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 HL G + I + SL PL +++ + +V G RE H + DI++F+ + + H Sbjct: 2768 HLFGMLRIHGVARHSLNPLGEIVDCHQNVLAVTGLRERFH*VYTPDIEYFDLQIVCEGHC 2589 Query: 585 LTLSDIPYSLAFVTRQDK 532 +T SD LA D+ Sbjct: 2588 ITSSDSSLPLAACASSDE 2535 Score = 29.5 bits (58), Expect(2) = 1e-24 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -1 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 2292 GGMYLDTM*FTMVAYHG 2242
>LOC_Os06g31920:12006.t02891:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4609 Score = 254 bits (549), Expect(5) = e-116 Identities = 97/170 (57%), Positives = 124/170 (72%) Frame = +1 / +2 Query: 823 GSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKL 1002 GSHFI FR L + H +A+PYHPQ+SGQ E SN++IK ILQK VN K W +KL Sbjct: 3602 GSHFIDKTFRNFLQELGAQHNIATPYHPQTSGQAETSNKQIKNILQKTVNEMGKAWKNKL 3781 Query: 1003 DDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDI 1182 DALWAY TAYK P+GMSPY++VYGK C+F +ELEH+A+WAI+ N D AG+ Sbjct: 3782 PDALWAYRTAYKTPIGMSPYQLVYGKTCHFSVELEHRAHWAIRTWNMDLTGAGQHRKMQH 3961 Query: 1183 SSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 S L+EWR +AY NAK++K++ KRWHDKRI+ +EF GD VLL+NSR++ F Sbjct: 3962 SELEEWRDKAYHNAKIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSRVKLF 4111 Score = 139 bits (299), Expect(5) = e-116 Identities = 54/109 (49%), Positives = 76/109 (69%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT++ D ++FV C CQ+ G IT + MP+ Y+L ++ Sbjct: 3275 YGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFVWRCTSCQKHGGITACEAMPLTYNLQVEL 3454 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 FDV G ++MGPFP S +VLVAVDYV+KWVEA+P + AD + +ML Sbjct: 3455 FDVWGINFMGPFPKSYDCEYVLVAVDYVSKWVEAMPCRAADAKHARRML 3601 Score = 39.6 bits (80), Expect(5) = e-116 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GPY + + GA+ + + EGN +V Sbjct: 4109 FGHGKLRSKWMGPYTVVDASSQGAVTLCDNEGNIFKV 4219 Score = 36.3 bits (73), Expect(5) = e-116 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 + KK+ + R + WD P+LY+ D ++RR ++G + K Sbjct: 3128 ENKKRLIYKSRGHLWDAPYLYRVCSDSLLRRCVPVDKGMKIIK 3256 Score = 29.0 bits (57), Expect(5) = e-116 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++VA ++PP Sbjct: 3050 LLKVIDSDSWYATIVNFMVAGHLPP 3124 Score = 78.0 bits (164), Expect(2) = 2e-21 Identities = 54/163 (33%), Positives = 78/163 (47%) Frame = -2 / -1 Query: 1317 RIV*QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKV 1138 RI Q ++ EL L V+PS L LGI+I L PF * + P+L+G I V Sbjct: 4096 RIEQQHLVPCFELLVLDPLVMPSFGSILVDLGIVIGLVPPFF*LRVLHLPVLSGSR*IHV 3917 Query: 1137 ELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL 958 D P+ VFQL ++T L ++ + *HA G L CI P L ID LL Sbjct: 3916 PSPDSPVRPVFQLY*KVTSLPVDKLVW*HADGRLISSPICPKCIR*LVLPCLPHLIDSLL 3737 Query: 957 *DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV 829 + DL + L+T L MI N ++ + ++E ++E+ Sbjct: 3736 QNVLDLFVACFCLSTCLGMIWSGNVVLSPKFLQKVSEGLIDEM 3608 Score = 46.4 bits (95), Expect(2) = 2e-21 Identities = 24/41 (58%), Positives = 27/41 (65%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+T + G GP+ P TSN Sbjct: 3576 SAALHGIASTHLDT*STATRTYSQS*DFGKGPMKLMPHTSN 3454 Score = 49.6 bits (102), Expect(2) = 3e-13 Identities = 27/48 (56%), Positives = 30/48 (62%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL + T SP LNS IRLSCHLL SL LA A LHSS+ Sbjct: 4110 KSFTRELNSSTLSPALNSLCLIRLSCHLLVLSL*ILAL**ALSLHSSS 3967 Score = 46.9 bits (96), Expect(2) = 3e-13 Identities = 23/40 (57%), Positives = 24/40 (60%) Frame = -3 / -2 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS+S K*Q P*T YGDMPMG Sbjct: 3939 PAPVKSMFQVRIAQCALCSNSTEK*QVFP*TSWYGDMPMG 3820 Score = 67.0 bits (140), Expect(2) = 3e-10 Identities = 43/120 (35%), Positives = 55/120 (45%) Frame = +2 / +3 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSS 1138 +R S+ R G + MH+G +GLLIR P ACH R V SWNT G S Sbjct: 3738 RRLSMRWGRHGRTSYLMHFGHIGLLIRRPSACHHTNLSTGRLVTFQ*SWNTGRTGLSGLG 3917 Query: 1139 TLISNLPVRSGCLISAH*MNGEPRHMRMPSCSRKRLRDGTTNEYKNESSM*VIMSCYTIL 1318 T I P +G + * NG R + MP +R +DG T+ SS C +IL Sbjct: 3918 TWI*REPDSTGRCSTLS*KNGGTRPITMPRSTRIEPKDGMTSGSSTRSSKQGTRCCCSIL 4097 Score = 26.3 bits (51), Expect(2) = 3e-10 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +3 / +1 Query: 468 NCPQGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LY 647 N + +A R LLA++++ + L + ++P+ H +A + I*C+G + Sbjct: 3301 NTRKDLAERILLANNVR*HKGIRLEMHKLPEAWRNHCLRSDATYIQPSSRVI*CMGHQFH 3480 Query: 648 GTIPE 662 GT P+ Sbjct: 3481 GTFPK 3495 Score = 40.0 bits (81), Expect(2) = 1e-05 Identities = 19/39 (48%), Positives = 24/39 (61%) Frame = +3 / +1 Query: 1008 CTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 CT+G+ DCL*++H HVT+ L L S GTQ LG Sbjct: 3787 CTLGI*DCL*DAHRHVTIPTCLREDLSLFSRVGTQGALG 3903 Score = 30.9 bits (61), Expect(2) = 1e-05 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +3 / +1 Query: 1191 R*MENPGI*ECQVVQGKG*EMARQTNTKTRVQCR*LCPVIQFSFE 1325 R ME G+ +CQ +QG +MA Q + VQ R +QFS E Sbjct: 3970 RRMEGQGLSQCQDLQG*NQKMA*QADQAQGVQSRGQGAAVQFSGE 4104 Score = 43.7 bits (89), Expect = 0.006 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP +++ + VTC W SYKQS+ P VH+ C Sbjct: 3902 PSAPCVPTLLKSDKSSRRQVGMVTCRWASYKQSYMPKVHQVAC 3774
>LOC_Os06g31950:12006.t02894:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4621 Score = 254 bits (549), Expect(5) = e-116 Identities = 97/170 (57%), Positives = 124/170 (72%) Frame = +1 / +2 Query: 823 GSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKL 1002 GSHFI FR L + H +A+PYHPQ+SGQ E SN++IK ILQK VN K W +KL Sbjct: 3614 GSHFIDKTFRNFLQELGAQHNIATPYHPQTSGQAETSNKQIKNILQKTVNEMGKAWKNKL 3793 Query: 1003 DDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDI 1182 DALWAY TAYK P+GMSPY++VYGK C+F +ELEH+A+WAI+ N D AG+ Sbjct: 3794 PDALWAYRTAYKTPIGMSPYQLVYGKTCHFSVELEHRAHWAIRTWNMDLTGAGQHRKMQH 3973 Query: 1183 SSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 S L+EWR +AY NAK++K++ KRWHDKRI+ +EF GD VLL+NSR++ F Sbjct: 3974 SELEEWRDKAYHNAKIYKDRTKRWHDKRIKHKEFKAGDKVLLFNSRVKLF 4123 Score = 138 bits (297), Expect(5) = e-116 Identities = 54/109 (49%), Positives = 75/109 (68%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT++ D ++FV C CQ+ G IT MP+ Y+L ++ Sbjct: 3287 YGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKHGGITACDAMPLTYNLQVEL 3466 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 FDV G ++MGPFP S +VLVAVDYV+KWVEA+P + AD + +ML Sbjct: 3467 FDVWGINFMGPFPKSYDCEYVLVAVDYVSKWVEAMPCRAADAKHARRML 3613 Score = 39.6 bits (80), Expect(5) = e-116 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GPY + + GA+ + + EGN +V Sbjct: 4121 FGHGKLRSKWMGPYTVVDASSQGAVTLCDNEGNIFKV 4231 Score = 36.3 bits (73), Expect(5) = e-116 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 + KK+ + R + WD P+LY+ D ++RR ++G + K Sbjct: 3140 ENKKRLIYKSRGHLWDAPYLYRVCSDSLLRRCVPVDKGMKIIK 3268 Score = 29.0 bits (57), Expect(5) = e-116 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++VA ++PP Sbjct: 3062 LLKVIDSDSWYATIVNFMVAGHLPP 3136 Score = 78.0 bits (164), Expect(3) = 7e-25 Identities = 54/163 (33%), Positives = 78/163 (47%) Frame = -2 / -1 Query: 1317 RIV*QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKV 1138 RI Q ++ EL L V+PS L LGI+I L PF * + P+L+G I V Sbjct: 4108 RIEQQHLVPCFELLVLDPLVMPSFGSILVDLGIVIGLVPPFF*LRVLHLPVLSGSR*IHV 3929 Query: 1137 ELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL 958 D P+ VFQL ++T L ++ + *HA G L CI P L ID LL Sbjct: 3928 PSPDSPVRPVFQLY*KVTSLPVDKLVW*HADGRLISSPICPKCIR*LVLPCLPHLIDSLL 3749 Query: 957 *DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV 829 + DL + L+T L MI N ++ + ++E ++E+ Sbjct: 3748 QNVLDLFVACFCLSTCLGMIWSGNVVLSPKFLQKVSEGLIDEM 3620 Score = 46.4 bits (95), Expect(3) = 7e-25 Identities = 24/41 (58%), Positives = 27/41 (65%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+T + G GP+ P TSN Sbjct: 3588 SAALHGIASTHLDT*STATRTYSQS*DFGKGPMKLMPHTSN 3466 Score = 29.0 bits (57), Expect(3) = 7e-25 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP 444 GI+ + VI P W +TN S VGQ P C VL+ PP Sbjct: 3438 GIASQAVIPPCFWQLVHLRTNSFVSSYIVGQKNPLCQIFACVLNAP**PP 3289 Score = 49.6 bits (102), Expect(2) = 3e-13 Identities = 27/48 (56%), Positives = 30/48 (62%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL + T SP LNS IRLSCHLL SL LA A LHSS+ Sbjct: 4122 KSFTRELNSSTLSPALNSLCLIRLSCHLLVLSL*ILAL**ALSLHSSS 3979 Score = 46.9 bits (96), Expect(2) = 3e-13 Identities = 23/40 (57%), Positives = 24/40 (60%) Frame = -3 / -2 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS+S K*Q P*T YGDMPMG Sbjct: 3951 PAPVKSMFQVRIAQCALCSNSTEK*QVFP*TSWYGDMPMG 3832 Score = 67.0 bits (140), Expect = 5e-10 Identities = 43/120 (35%), Positives = 55/120 (45%) Frame = +2 / +3 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSS 1138 +R S+ R G + MH+G +GLLIR P ACH R V SWNT G S Sbjct: 3750 RRLSMRWGRHGRTSYLMHFGHIGLLIRRPSACHHTNLSTGRLVTFQ*SWNTGRTGLSGLG 3929 Query: 1139 TLISNLPVRSGCLISAH*MNGEPRHMRMPSCSRKRLRDGTTNEYKNESSM*VIMSCYTIL 1318 T I P +G + * NG R + MP +R +DG T+ SS C +IL Sbjct: 3930 TWI*REPDSTGRCSTLS*KNGGTRPITMPRSTRIEPKDGMTSGSSTRSSKQGTRCCCSIL 4109 Score = 40.0 bits (81), Expect(2) = 1e-05 Identities = 19/39 (48%), Positives = 24/39 (61%) Frame = +3 / +1 Query: 1008 CTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 CT+G+ DCL*++H HVT+ L L S GTQ LG Sbjct: 3799 CTLGI*DCL*DAHRHVTIPTCLREDLSLFSRVGTQGALG 3915 Score = 30.9 bits (61), Expect(2) = 1e-05 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +3 / +1 Query: 1191 R*MENPGI*ECQVVQGKG*EMARQTNTKTRVQCR*LCPVIQFSFE 1325 R ME G+ +CQ +QG +MA Q + VQ R +QFS E Sbjct: 3982 RRMEGQGLSQCQDLQG*NQKMA*QADQAQGVQSRGQGAAVQFSGE 4116 Score = 43.7 bits (89), Expect = 0.006 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP +++ + VTC W SYKQS+ P VH+ C Sbjct: 3914 PSAPCVPTLLKSDKSSRRQVGMVTCRWASYKQSYMPKVHQVAC 3786
>LOC_Os04g20720:12004.t01807:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4184 Score = 387 bits (840), Expect(3) = e-114 Identities = 148/273 (54%), Positives = 194/273 (71%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+++F+ C CQR G IT R MP+ Y+L ++ Sbjct: 3357 YGGHYGAFRTQAKIWQSGFFWPTMYEDSKEFIRRCTSCQRQGGITARDAMPLTYNLQVEI 3536 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P AD + KM IFPRFG Sbjct: 3537 FDVWGIDFMGPFPKSRNCEYILVAVDYVSKWVEAMPCSAADARHAKKMFTETIFPRFGTR 3716 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D G HFI FR +L + + H VA+PYHPQ+SGQ E SN++IK ILQK VN+ Sbjct: 3717 RMVISDRGFHFIDKTFRDLLREMEAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMG 3896 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L DALWAY TAYK P+GMSPY++VYGK+C P+ELEH+AYWAI+ N DF+ AG Sbjct: 3897 TEWKDRLQDALWAYRTAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNSNMDFEGAG 4076 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHD 1260 E I+ L+EWR AY NAK++KE+ KRWHD Sbjct: 4077 EWRKMQIAELEEWREMAYHNAKIYKERTKRWHD 4175 Score = 38.2 bits (77), Expect(3) = e-114 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ + WD+P+LY+ DG++RR ++G Sbjct: 3210 ENQRKLKYESHRHIWDEPYLYRVCSDGLLRRCVPTDEG 3323 Score = 26.7 bits (52), Expect(3) = e-114 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 / +3 Query: 242 YADYANYIVAKYIPPSFTYQQKK 310 YA+ NY+V+K IPP ++ K Sbjct: 3162 YANIVNYMVSKCIPPGENQRKLK 3230 Score = 88.6 bits (187), Expect(3) = 3e-31 Identities = 55/118 (46%), Positives = 66/118 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L S K MK +P S++ L Sbjct: 3889 LLTVFCRIFLICLFDVSA*PLVCGW*GVATLCLASISRRRSLKVLSMK*KPRSLMTILRV 3710 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 3709 PNLGKMVSVNIFLACLASAALHGIASTHLET*STATRMYSQLRDLGKGPMKSIPQTSN 3536 Score = 56.1 bits (116), Expect(3) = 3e-31 Identities = 34/74 (45%), Positives = 38/74 (51%) Frame = -3 / -2 Query: 1262 LSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAXXXXXXXXLIAQ*ALCSSSRGK*Q 1083 +SC SL A A LHSS+ I SPA L+AQ ALCSSS G Sbjct: 4177 MSCQRFVLSLYIFALW*AISLHSSSSAICIFLHSPAPSKSMFEFLMAQYALCSSSTGSRH 3998 Query: 1082 ALP*TILYGDMPMG 1041 P*TI YGD+PMG Sbjct: 3997 DFP*TI*YGDIPMG 3956 Score = 30.9 bits (61), Expect(3) = 3e-31 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW N S VGQ KP C L V + +PP* Sbjct: 3508 GIASRAVIPPCLWQLVHLLMNSFESSYIVGQKKPLCQILAWVRNAP*WPP* 3356 Score = 100 bits (212), Expect = 6e-20 Identities = 70/256 (27%), Positives = 118/256 (46%) Frame = -2 / -1 Query: 1260 VVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPISFVFQLKREITG 1081 V+P+L F L +++ SPF+ ++ + +I V + D PI + + T Sbjct: 4175 VMPALRPFFIYLCVVVSHFSPFLKFCNLHFSPFSCSLKIHVRIPDGPICSMLKFYG*ST* 3996 Query: 1080 LTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRM 901 L I++ I H++G L C+++ P S +D LL + DL + LTT L M Sbjct: 3995 LPIDYLIWGHSNGCLVCCPVCPQCVLQSILPFCSHFVDRLLQNILDLFVRCFCLTTGLWM 3816 Query: 900 IRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDS 721 +R + + S ++E +NEV T +++ S +KSWE +HL G I + S Sbjct: 3815 VRSGHVVFGFHFS*EVSEGFVNEVKTSVAYDHSAGTKSWEDGFCEHLLGVPRIRGAARHS 3636 Query: 720 LYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTR 541 L PL D++ + +V RE SH + +I++ N + + H + SD LA Sbjct: 3635 LNPLGDIVDCHQNVLAVTRLRERSHEVYTPNIEYLNLQIVCKGHCIASSDSSLPLAACAS 3456 Query: 540 QDKLTGILEESGPIET 493 D+ + P ET Sbjct: 3455 SDEFF*VFVHCRPEET 3408 Score = 32.2 bits (64), Expect(2) = 0.41 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = +3 / +2 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A FLLA +++ + + ++P+ R H + NA + * I CLG L+GT Sbjct: 3392 QNLAKWFLLADNVRRLKRIHQKMHKLPEARRNHCSRCNAPYIQFAS*DIRCLGYRLHGTF 3571 Query: 657 P 659 P Sbjct: 3572 P 3574 Score = 22.6 bits (43), Expect(2) = 0.41 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = +3 / +2 Query: 774 SHIPKIWSP 800 +H+PKIW P Sbjct: 3689 NHLPKIWYP 3715
>LOC_Os10g17400:12010.t01299:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5261 Score = 186 bits (401), Expect(5) = e-112 Identities = 74/142 (52%), Positives = 101/142 (71%) Frame = +1 / +3 Query: 907 QSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKAC 1086 ++SGQ E N++IK IL K VN+ +L DALWAY TAYK P+ MSP+++VYGK C Sbjct: 3666 ETSGQAETLNKQIKNIL*KTVNKMGTG*KDRLSDALWAYRTAYKTPIRMSPHQIVYGKPC 3845 Query: 1087 YFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKR 1266 P+ELEH+AY AI+ N DF+ AGE I+ L+EWR + Y N K++KEK KRWH+KR Sbjct: 3846 RLPVELEHRAYLAIRNWNMDFEGAGEWRKMQIAELEEWREKTYHNTKIYKEKTKRWHEKR 4025 Query: 1267 IQKREFNVGDYVLLYNSRLRFF 1332 I+ ++F GD VL++NSR++ F Sbjct: 4026 IKIKKFKPGDKVLMFNSRVKLF 4091 Score = 182 bits (393), Expect(5) = e-112 Identities = 71/137 (51%), Positives = 94/137 (68%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT + QSGF+WPT+ +D+R+F+ C CQR G IT R MP+ Y+L ++ Sbjct: 3257 YGGHYGAFRTQAMIWQSGFFWPTM*EDSREFIRRCTSCQRQGGITTRDAMPLTYNLQVEI 3436 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P AD + KM +IFPRFG P Sbjct: 3437 FDVWGIDFMGPFPKSRSCEYILVAVDYVSKWVEAMPCSAADARHAKKMFTEIIFPRFGTP 3616 Query: 802 RYLMTDDGSHFIHGVFR 852 R +++D GSHFI FR Sbjct: 3617 RMVISDGGSHFIDKTFR 3667 Score = 40.0 bits (81), Expect(5) = e-112 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+P+LY+ DG++RR ++G Sbjct: 3110 ENQRKLKYESRRHIWDEPYLYRVCSDGLLRRCVPTKEG 3223 Score = 39.1 bits (79), Expect(5) = e-112 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +1 / +3 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + ++ GAI + + GN +V Sbjct: 4089 FDHGKLRSKWEGPFDVIDISSHGAITLRDDSGNIFKV 4199 Score = 37.3 bits (75), Expect(5) = e-112 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPPSFTYQQKK 310 ++ S S PWY + NY+V+ YIPP ++ K Sbjct: 3032 LMTVSDSNPWYVNIVNYMVSMYIPPGENQRKLK 3130 Score = 73.9 bits (155), Expect(4) = 2e-25 Identities = 39/77 (50%), Positives = 49/77 (63%) Frame = -3 / -3 Query: 851 RKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VY 672 RK +K EP S++ LG PNLG M ++I + SA L GIASTHL T*STAT+ Sbjct: 3666 RKVLSIK*EPPSLMTILGVPNLGKMISVNIFLACLASAALHGIASTHLET*STATRMYSQ 3487 Query: 671 PLELGNGPI*SKPETSN 621 +LG GP+ S P+TSN Sbjct: 3486 LRDLGKGPMKSIPQTSN 3436 Score = 58.8 bits (122), Expect(4) = 2e-25 Identities = 40/98 (40%), Positives = 47/98 (47%) Frame = -3 / -2 Query: 1334 AKNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPA 1155 +K+L EL T SP LN I SC FSL + LHSS+ I SPA Sbjct: 4093 SKSLTLELNISTLSPGLNFLIFILFSCQRFVFSLYIFVLW*VFSLHSSSSAICIFLHSPA 3914 Query: 1154 XXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+A+ ALCSSS G P*TI GD+ MG Sbjct: 3913 PSKSMFQFLMAKYALCSSSTGSRHGFP*TI*CGDILMG 3800 Score = 31.3 bits (62), Expect(4) = 2e-25 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R+VI P LW N S VGQ KP C + V + +PP* Sbjct: 3408 GIASRVVIPPCLWQLVHLLMNSLESSYIVGQKKPLCQIMAWVRNAP*WPP* 3256 Score = 26.7 bits (52), Expect(4) = 2e-25 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -2 / -3 Query: 285 GGMYLATI*FA*SAYHG 235 GGMY+ T+*F YHG Sbjct: 3105 GGMYMDTM*FTMLTYHG 3055 Score = 52.4 bits (108), Expect = 1e-05 Identities = 32/121 (26%), Positives = 59/121 (48%) Frame = -2 / -2 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVS 676 ++E +N++ T +++ S +KSWE D +HL G I + SL PL D++ + +V Sbjct: 3670 VSEGFVNKMRTSVTYDHSGGTKSWEDDFGEHLLGMPRIRGTARHSLNPLGDIVDCHQNVL 3491 Query: 675 VPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDKLTGILEESGPIE 496 RE SH + +I++ + + + H + SD LA ++ + + P E Sbjct: 3490 AAARLRERSHEVYTPNIEYLDLQIVCEGHCIASSDSSLPLAAGASSNEFS*VFLHCWPKE 3311 Query: 495 T 493 T Sbjct: 3310 T 3308
>LOC_Os12g20040:12012.t01847:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4962 Score = 218 bits (471), Expect(5) = e-112 Identities = 84/146 (57%), Positives = 109/146 (74%) Frame = +1 / +2 Query: 895 PYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVY 1074 PYHPQ+SGQ E SN+ IK ILQK VN+ W +L DALWAY T YK P+GMSPY++VY Sbjct: 3116 PYHPQTSGQAETSNKHIKNILQKTVNKMGTRWKDRLLDALWAYRTTYKTPIGMSPYQIVY 3295 Query: 1075 GKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRW 1254 GK+C P+ELEH+AY AI+ N DF+ AGE I+ L+EWR +AY NAK++KE+ KRW Sbjct: 3296 GKSCRLPVELEHRAYCAIRNWNMDFEGAGEWRKMQIAELEEWREKAYHNAKIYKERTKRW 3475 Query: 1255 HDKRIQKREFNVGDYVLLYNSRLRFF 1332 HDKRI+ ++F GD VL++N R++ F Sbjct: 3476 HDKRIKIKKFKPGDKVLMFNYRVKLF 3553 Score = 150 bits (322), Expect(5) = e-112 Identities = 58/122 (47%), Positives = 80/122 (65%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG ++ RT K+ QSGF+WPT+++D+++F C C R G IT R MP+ Y+L ++ Sbjct: 2671 YGSHYGAFRTQAKIWQSGFFWPTMYEDSKEFPRRCTSC*RQGGITARNAMPLTYNLQVEI 2850 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 DV G D+MGPFP S ++LVAVDYV+KWVEA+P AD + M +IFPRFG P Sbjct: 2851 SDVWGIDFMGPFPKSRNCEYILVAVDYVSKWVEAMPCSAADARHAKNMFIEIIFPRFGTP 3030 Query: 802 RY 807 + Sbjct: 3031 EW 3036 Score = 41.8 bits (85), Expect(5) = e-112 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PWYA+ NY+V+KYIPP Q+ K Sbjct: 2464 SNPWYANIVNYMVSKYIPPGENQQKLK 2544 Score = 40.0 bits (81), Expect(5) = e-112 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+P+LY+ DG++RR ++G Sbjct: 2524 ENQQKLKYESRRHIWDEPYLYRVCSDGLLRRCVPTDEG 2637 Score = 34.5 bits (69), Expect(5) = e-112 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWE P+ + + GAI + + GN +V Sbjct: 3551 FGHGKLCSKWERPFNVIDTSLHGAITLRDNSGNIFKV 3661 Score = 66.6 bits (139), Expect(3) = 8e-23 Identities = 44/97 (45%), Positives = 49/97 (50%) Frame = -3 / -1 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L L T SP LN I LSC SL A A+ LHSS+ I SPA Sbjct: 3552 KSLTL*LNISTLSPGLNFLIFILLSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 3373 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 3372 SKSIFQFLMAQYALCSSSTGSRHDFP*TI*YGDIPMG 3262 Score = 61.1 bits (127), Expect(3) = 8e-23 Identities = 31/60 (51%), Positives = 39/60 (65%) Frame = -3 / -2 Query: 800 GTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 G PNLG M +++ + SA L GIASTHL T*STAT+ +LG GPI S P+TS+ Sbjct: 3029 GVPNLGKMISMNMFLACLASAALHGIASTHLET*STATRMYSQLRDLGKGPIKSIPQTSD 2850 Score = 31.8 bits (63), Expect(3) = 8e-23 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIPR Sbjct: 2517 WYVLGYHVVYYVGIPR 2470 Score = 64.8 bits (135), Expect(2) = 2e-10 Identities = 37/134 (27%), Positives = 68/134 (50%) Frame = -2 / -3 Query: 1296 ITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPI 1117 ++++E Y FV+P+L F L +++ L SPF +++ + F++ + + D + Sbjct: 3517 VSWLEFLDFYPFVMPALRPFFVYLCVMVGLLSPFFKFSNLHFSPFSCSFKVHIPVSDGTV 3338 Query: 1116 SFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLP 937 V + R T L +++ I H++G L CI + P S +D LL*+ ++ Sbjct: 3337 CSVLKFHR*ST*LPVDYLIWGHSNGCLVCCPVCPQCIQQSILPSCSHFVDRLL*NILNMF 3158 Query: 936 ITQLHLTTRLRMIR 895 + LTT LRM+R Sbjct: 3157 VRCFCLTTGLRMVR 3116 Score = 29.5 bits (58), Expect(2) = 2e-10 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -2 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 2519 GGMYLDTM*FTMLAYHG 2469 Score = 29.5 bits (58), Expect(2) = 2.4 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = +3 / +3 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A FLLA++++ + + ++ + R H + NA + I CLG LYGT Sbjct: 2706 QDLAKWFLLANNVRRLKRIPQKMHKLLEARRNHCSQCNAPHIQFASRDIRCLGYRLYGTF 2885 Query: 657 P 659 P Sbjct: 2886 P 2888 Score = 22.6 bits (43), Expect(2) = 2.4 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = +3 / +3 Query: 774 SHIPKIWSP 800 +H+PKIW P Sbjct: 3003 NHLPKIWYP 3029
>LOC_Os03g41790:12003.t03586:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2248 Score = 382 bits (828), Expect(2) = e-108 Identities = 147/274 (53%), Positives = 197/274 (71%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++F+ C CQR G IT R MP+ Y+L ++ FDV G D+MGPFP S ++LV Sbjct: 1 MYEDSKEFIRRCTSCQRQGGITTRDAMPLTYNLQVEIFDVWGIDFMGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+KWVEA+P A+ + KM IFPRFG PR +++D GSHFI FR +L + Sbjct: 181 AVDYVSKWVEAMPCSAAEARHAKKMFTEFIFPRFGTPRMVISDGGSHFIDKTFRDLLREM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMG 1050 H VA+PYHPQ+SGQ E SN++IK ILQK VN+ W +L DALWAY TAYK P+G Sbjct: 361 GAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMGTGWKDRLPDALWAYRTAYKTPIG 540 Query: 1051 MSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKL 1230 MSPY++VYGK C P+ELEH+AYWAI+ N DF+ AGE I+ L+EWR +AY NAK+ Sbjct: 541 MSPYQIVYGKPCRLPVELEHRAYWAIRNWNMDFEGAGEWRKMQIAELEEWREKAYHNAKI 720 Query: 1231 FKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 +KE+ KRWH+KRI+ ++F GD VL++NSR++ F Sbjct: 721 YKERTKRWHEKRIKIKKFKPGDKVLMFNSRVKLF 822 Score = 34.1 bits (68), Expect(2) = e-108 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + GAI + + GN +V Sbjct: 820 FGHGKLRSKWEGPFDVINTSSHGAITLCDDLGNIFKV 930 Score = 92.7 bits (196), Expect(2) = 9e-33 Identities = 56/118 (47%), Positives = 66/118 (55%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S PL G *G ATL L RK MK EP S++ LG Sbjct: 464 LLTVFCRIFLICLFDVSACPLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGV 285 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 284 PNLGKMNSVNIFLACLASAALHGIASTHLET*STATRMYSQLRDLGKGPMKSIPQTSN 111 Score = 69.8 bits (146), Expect(2) = 9e-33 Identities = 44/97 (45%), Positives = 49/97 (50%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I SC SL A A+ LHSS+ I SPA Sbjct: 821 KSLTLELNISTLSPGLNFLIFILFSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 642 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 641 SKSMFQFLMAQYALCSSSTGSRHGFP*TI*YGDIPMG 531 Score = 89.0 bits (188), Expect = 1e-16 Identities = 52/184 (28%), Positives = 94/184 (51%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q +++++ LY F +P+L F L +++ L SPF+ +D+ + +I V + D Sbjct: 795 QYFVSWLKFLDLYPFFMPALRPFFVYLCVVVSLFSPFLKFSDLHFSPFSCSLKIHVPIPD 616 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + E T L +++ I H++G L C+ + P S +D LL + Sbjct: 615 GPVCSVLKFYGESTWLPVDYLIWGHSNGCLVCCPICPQCVRQSVLPSCSHFVDRLLQNIL 436 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + L+T L ++R + + S ++E +NEV T +++ SR +KSWE + + Sbjct: 435 DLFV*CFCLSTGLWVVRSGHIVFGSHFS*EVSEGFVNEVRTSVTYDHSRGTKSWEDEFCE 256 Query: 765 HLNG 754 HL G Sbjct: 255 HLLG 244 Score = 28.6 bits (56), Expect(2) = 1.4 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +3 / +3 Query: 777 HIPKIWSP*IFDD**RFTLH 836 H+PKIW P* * RF+LH Sbjct: 267 HLPKIWYP*NGHK*RRFSLH 326 Score = 24.4 bits (47), Expect(2) = 1.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +3 / +3 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 ++P+ R H + NA + I CLG L+GT P Sbjct: 39 KLPEARRNHYSRCNAPYIQFTSRDIRCLGYRLHGTFP 149
>LOC_Os06g35000:12006.t03197:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3495 Score = 338 bits (733), Expect(3) = e-104 Identities = 133/254 (52%), Positives = 177/254 (69%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+ PT+++D+++FV C CQR G IT R MP+ Y+L ++ Sbjct: 2728 YGGHYGAFRTQAKIWQSGFF*PTMYEDSKEFVRRCTSCQRQGGITARDAMPLTYNLQVEI 2907 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MG FP S+ ++LVAVDYV+KWVEA+P D + KM +IFPRFG P Sbjct: 2908 FDVWGIDFMGLFPKSHNCEYILVAVDYVSKWVEAMPCSAVDARHAKKMFTEIIFPRFGTP 3087 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQK+VN+ Sbjct: 3088 RMVISDGGSHFIDKTFRDLLREMRAKHNVATPYHPQTSGQAETSNKQIKNILQKMVNKMG 3267 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 W +L DALWAY TAYK P+GMSPY +V+ K C P+E+EH+AYWAI+ N DF+ AG Sbjct: 3268 TGWKDRLPDALWAYRTAYKTPIGMSPYPIVHEKPCRLPVEIEHRAYWAIRNWNMDFEGAG 3447 Query: 1162 EKWLFDISSLDEWR 1203 E I+ L+EWR Sbjct: 3448 EWRKMQIAELEEWR 3489 Score = 41.8 bits (85), Expect(3) = e-104 Identities = 13/38 (34%), Positives = 25/38 (65%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+P+LY+ DG++RR E+G Sbjct: 2581 ENQRKLKYESRRHIWDEPYLYRVYSDGLLRRCVPTEEG 2694 Score = 41.4 bits (84), Expect(3) = e-104 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPPSFTYQQKK 310 ++ S S PWYA+ NY+V+KY+PP ++ K Sbjct: 2503 LMMVSDSNPWYANIVNYMVSKYVPPGENQRKLK 2601 Score = 84.9 bits (179), Expect(3) = 6e-26 Identities = 54/118 (45%), Positives = 64/118 (54%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLTIFCR S PL G *G ATL L RK +K EP S++ LG Sbjct: 3260 LLTIFCRIFLICLFDVSACPLVCGW*GVATLCLALISRRRSRKVLSIK*EPPSLMTILGV 3081 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + S L GIASTHL T*STAT+ +LG P+ S P+TSN Sbjct: 3080 PNLGKMISVNIFLACLASTALHGIASTHLET*STATRMYSQL*DLGKSPMKSIPQTSN 2907 Score = 42.8 bits (87), Expect(3) = 6e-26 Identities = 25/54 (46%), Positives = 28/54 (51%) Frame = -3 / -2 Query: 1202 LHSSNELISNNHFSPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 LHSS+ I SPA L+AQ ALCS S G TI YGD+PMG Sbjct: 3488 LHSSSSAICIFLHSPAPSKSMFQFLMAQYALCSISTGSRHGFSWTIGYGDIPMG 3327 Score = 29.5 bits (58), Expect(3) = 6e-26 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VG KP C L V + +PP* Sbjct: 2879 GIASRAVIPPCLWQLVHLLTNSFESSYIVG*KKPLCQILAWVRNAP*WPP* 2727 Score = 86.8 bits (183), Expect(2) = 2e-17 Identities = 62/226 (27%), Positives = 105/226 (46%) Frame = -2 / -1 Query: 1209 LGSPFI**ADIKQPLLTGKFEIKVELFDCPISFVFQLKREITGLTINHFIR*HAHGILXX 1030 L SPF+ +D+ + +I V + D P+ V L +++ I H++G L Sbjct: 3495 LFSPFLKFSDLHFSPFSCSLKIHVPIPDGPVCSVLNFYG*SAWLLVDYRIWGHSNGCLVC 3316 Query: 1029 XXXXX*CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLA 850 C+ + P S +D LL + DL + L+T L M+R + + S ++ Sbjct: 3315 CSVCPQCVRQSVLPSCSHFVDHLLQNILDLFV*CFCLSTGLWMVRSGHIVFGSHFS*EVS 3136 Query: 849 ENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVP 670 E +N+V T I++ S +KSWE D +HL G I + SL PL D++ + +V Sbjct: 3135 EGFVNKVRTSITYDHSGGTKSWEDDFCEHLLGMPRIHSAARHSLNPLGDIVDCHQNVLTV 2956 Query: 669 IGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDK 532 + RE SH + +IK+ + + + H + S+ LA DK Sbjct: 2955 VRLREKSHEVYTPNIKYLDLQIVCEGHCIACSNSSLPLAAGASSDK 2818 Score = 30.9 bits (61), Expect(2) = 2e-17 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIPR Sbjct: 2574 WYVLGYHVVYDVGIPR 2527 Score = 32.2 bits (64), Expect(2) = 0.015 Identities = 19/59 (32%), Positives = 31/59 (52%) Frame = +3 / +3 Query: 483 IAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 +A R LLA+++ +C + ++P+ R + NA + I*CLG L+GT P Sbjct: 2769 LAKRLLLANNV*RLKRICQKMHQLPEARRNYCTRCNAPHIQFASRDI*CLGYRLHGTFP 2945 Score = 27.6 bits (54), Expect(2) = 0.015 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +3 / +3 Query: 711 VGRGYPH*KC*SPHLH*DA*ISHIPKIWSP*IFDD**RFTLH 836 VG GY +C D +H+PKIW P * RF+L+ Sbjct: 2997 VG*GYAVQRCGCEACQEDVHRNHLPKIWYPQNGHK*WRFSLY 3122
>LOC_Os10g07090:12010.t00571:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2245 Score = 361 bits (782), Expect(2) = e-103 Identities = 140/274 (51%), Positives = 192/274 (70%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++++++FV C CQR G IT R MP+ Y+L I+ FDV G D+MGPFP S ++LV Sbjct: 1 MYENSKEFVRRCPSCQRQGGITARDAMPLTYNLQIEIFDVWGIDFMGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDY++KWVEA+P AD + KM +IFPRFG PR +++D GSHFI +FR +L Sbjct: 181 AVDYISKWVEAMPCSAADAKHAKKMFTEIIFPRFGTPRMVISDGGSHFIDKIFRDLLRDM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMG 1050 H VA+PYHP +SGQ + N++IK ILQK VN+ W KL D LW Y TAYK P+G Sbjct: 361 GAKHNVATPYHPHTSGQAKTPNKQIKNILQKTVNKMET*WKEKLPDVLWVYRTAYKTPIG 540 Query: 1051 MSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKL 1230 +SPY+++Y K+C P+ELEH+AY AI+ N DF+ AGE I+ L+EWR +AY NAK+ Sbjct: 541 LSPYQILYEKSCRLPVELEHRAY*AIRNWNMDFEGAGE*RKMQIAELEEWREKAYHNAKI 720 Query: 1231 FKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 +KE+ KRWHDKR + ++F GD VL++NSR++ F Sbjct: 721 YKERTKRWHDKRTKIKKFKPGDKVLMFNSRVKLF 822 Score = 36.8 bits (74), Expect(2) = e-103 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F+ G+L SKWEGP+ + + AI + + GN +V Sbjct: 820 FYHGKLRSKWEGPFDVIDTSSHWAITLRDDSGNIFKV 930 Score = 100 bits (212), Expect(3) = 2e-35 Identities = 57/118 (48%), Positives = 67/118 (56%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR *PL G *G ATL L RK MKCEP S++ LG Sbjct: 464 LLTVFCRIFLICLFGVFA*PLVCGW*GVATLCLAPMSRRRSRKILSMKCEPPSLMTILGV 285 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + + SA L GIASTHL *STAT+ +LG GPI S P+TSN Sbjct: 284 PNLGKMISVNIFLACFASAALHGIASTHLEI*STATRIYSQLRDLGKGPIKSIPQTSN 111 Score = 67.0 bits (140), Expect(3) = 2e-35 Identities = 43/97 (44%), Positives = 50/97 (51%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN + LSC SL LA YA+ LHSS+ I +SPA Sbjct: 821 KSLTLELNISTLSPGLNFLIFVLLSCQRFVLSLYILAL*YAFSLHSSSSAICIFLYSPAP 642 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G *+I GD PMG Sbjct: 641 SKSIFQFLMAQYALCSSSTGSRHDFS*SI**GDSPMG 531 Score = 22.6 bits (43), Expect(3) = 2e-35 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTN 531 GI+ R VI P LW +TN Sbjct: 83 GIASRAVIPPCLWQLGHLRTN 21 Score = 113 bits (242), Expect = 5e-24 Identities = 70/258 (27%), Positives = 125/258 (48%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E ++P+L ++ICL SPF + + PL + F++ + + D Sbjct: 795 QHFVSWLEFLDFCPLIMPTLRPLFVYFSVVICLLSPFFKFSYLHFPLFSCSFKVHIPVPD 616 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 I V + RE L + + I ++G L + +F P +D LL + Sbjct: 615 GSICSVLEFYRESA*LFVEYLIGGQSNGCLVCCSVYPQYVRQFLLPSCFHFVDRLLQNIL 436 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL I + LT + M+R + ++ +S ++E+ ++EV T +++ R +K WE DL + Sbjct: 435 DLFIWRFCLTAGMWMVRCSHVVLGSHVS*KVSEDFVDEVRTSVTYDHPRGTKPWEDDLCE 256 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 HL G + I + SL PL D++ + ++ G RE SH + +IK+ N + + H Sbjct: 255 HLLGMLRIRGAAWHSLNPLGDIVDCHQNILAVTGLRERSHKVDTPNIKYLNLQVVCEGHC 76 Query: 585 LTLSDIPYSLAFVTRQDK 532 + SD SLA DK Sbjct: 75 IASSDSSLSLAAWASSDK 22 Score = 37.3 bits (75), Expect(2) = 3e-04 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +3 / +3 Query: 531 VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 +C + ++P+ R H + NA + +* I*CLG LYGT P Sbjct: 21 ICPKMPKLPETRRNHCSRCNAPHIQPAN*DI*CLGYRLYGTFP 149 Score = 28.6 bits (56), Expect(2) = 3e-04 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 / +3 Query: 777 HIPKIWSP*IFDD**RFTLHSWCFPQ 854 H+PK+W P* * RF LH P+ Sbjct: 267 HLPKVWYP*DGHK*RRFALHRQNLPR 344
>LOC_Os12g19950:12012.t01838:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 912 Score = 365 bits (791), Expect(2) = e-103 Identities = 144/274 (52%), Positives = 193/274 (70%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV C CQR G IT R MP+ Y+L ++ FDV G D+M PFP S ++LV Sbjct: 1 MYEDSKEFVRRCTSCQRQGGITARDAMPLTYNLQVEIFDVWGIDFMWPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+KWVEA+P AD + KM +IFP FG PR +++D GSHFI FR +L + Sbjct: 181 AVDYVSKWVEAMPCSAADAKHAKKMFTKIIFPSFGTPRMVISDGGSHFIDKTFRDLLQEM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMG 1050 H VA+PYHPQ+SGQ E SN++IK ILQK +N+ W +L DAL AY TAYK P+G Sbjct: 361 RAKHNVATPYHPQTSGQAETSNKQIKNILQKTINKMGTGWKDRLPDAL*AYWTAYKTPIG 540 Query: 1051 MSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKL 1230 MSPY++VYGK C P++LE +AYWAI+ N DFK AGE I+ L+EWR +AY NAK+ Sbjct: 541 MSPYQIVYGKPCRLPVKLERRAYWAIRNWNMDFKRAGEWRKMQIAELEEWREKAYHNAKI 720 Query: 1231 FKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 +KE+ KR HDKRI+ ++F GD VL++NSR++ F Sbjct: 721 YKERTKRRHDKRIKMKKFKPGDNVLMFNSRVKLF 822 Score = 31.3 bits (62), Expect(2) = e-103 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINN 1413 F G+L SKWEGP+ + + GAI + + Sbjct: 820 FGHGKLRSKWEGPFDVIDTSLHGAITLRD 906 Score = 86.3 bits (182), Expect(2) = 2e-28 Identities = 53/118 (44%), Positives = 65/118 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LL +FCR S PL G *G ATL L RK MK EP S++ LG Sbjct: 464 LLIVFCRIFLICLFDVSACPLVCGW*GVATLCLALISCRRSRKVLSMK*EPPSLMTILGV 285 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 P LG M +++I + + SA L GIASTHL T*STAT+ +LG G + S P+TSN Sbjct: 284 PKLGKMIFVNIFLACFASAALHGIASTHLET*STATRMYSQLRDLGKGHMKSIPQTSN 111 Score = 61.6 bits (128), Expect(2) = 2e-28 Identities = 43/97 (44%), Positives = 48/97 (49%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I LSC SL A A+ LHSS+ I SPA Sbjct: 821 KSLTLELNISTLSPGLNFFIFILLSCLRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAR 642 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ AL SS G P*TI YGD+PMG Sbjct: 641 LKSMFQFLMAQYALRSSFTGSRHGFP*TI*YGDIPMG 531 Score = 44.6 bits (91), Expect = 0.003 Identities = 28/108 (25%), Positives = 53/108 (49%) Frame = -2 / -1 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVS 676 +++ +NEV T +++ S +K+ E D +HL G + I + SL PL D++ + +V Sbjct: 345 VSKGFVNEVRTSVTYDHSGGTKTREDDFCEHLLGMLRIRSAARHSLNPLGDIVDCHQNVL 166 Query: 675 VPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDK 532 RE H + +I++ + + + H + SD LA D+ Sbjct: 165 AVARLRERPHEVYTPNIEYLDLQIVCEGHCIASSDSSLPLAAGASSDE 22
>LOC_Os11g23130:12011.t01982:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1957 Score = 361 bits (782), Expect(2) = e-102 Identities = 141/279 (50%), Positives = 195/279 (69%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV C CQR G IT R +P+ Y++ ++ FDV G D+MGPFP S ++LV Sbjct: 1 MYEDSKEFVRRCTSCQRQGGITARDAIPLTYNMQLEIFDVWGIDFMGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 VDYV+KWVEA+P + + KM +IFPRFG PR +++D GSHFI+ F+ +L + Sbjct: 181 VVDYVSKWVEAMPCSATEAKHAKKMFTEIIFPRFGTPRMVISDGGSHFINKTFQDLLREM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMG 1050 H VA+PYHPQ+SGQ E SN++IK ILQK VN+ W +L DAL AY TAYK P+G Sbjct: 361 GAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMGIGWKDRLSDAL*AYRTAYKTPIG 540 Query: 1051 MSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKL 1230 MSP ++VY K+C P+ELEHKAYWAI+ N DF+ AGE I+ L+EWR +AY N ++ Sbjct: 541 MSP*QIVYEKSCRLPVELEHKAYWAIRNRNMDFEGAGEWRKMQIAELEEWREKAYHNVRI 720 Query: 1231 FKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFFAGRLL 1347 +KE+ RWHDKRI+ ++F GD VL++NSR++ F R L Sbjct: 721 YKERTNRWHDKRIKIKKFKPGDKVLMFNSRVKIFGHRKL 837 Score = 32.7 bits (65), Expect(2) = e-102 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ + + GAI + + GN +V Sbjct: 832 KLRSKWEGPFDVIDTSSHGAITL*DDSGNIFKV 930 Score = 73.5 bits (154), Expect(3) = 3e-27 Identities = 37/72 (51%), Positives = 46/72 (63%) Frame = -3 / -3 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK EP S++ LG PNLG M ++I + + S L GIASTHL T*ST T+ +LG Sbjct: 326 MK*EPPSLMTILGVPNLGKMISVNIFLACFASVALHGIASTHLET*STTTRMYSQLRDLG 147 Query: 656 NGPI*SKPETSN 621 GPI S P+TSN Sbjct: 146 KGPIKSIPQTSN 111 Score = 61.6 bits (128), Expect(3) = 3e-27 Identities = 43/97 (44%), Positives = 47/97 (48%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K L EL T SP LN I LSC SL L A+ LHSS+ I SPA Sbjct: 821 KILTLELNISTLSPGLNFLIFILLSCQRFVLSLYILTLW*AFSLHSSSSAICIFLHSPAP 642 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G *TI GD+PMG Sbjct: 641 SKSMFLFLMAQYALCSSSTGSRHDFS*TIC*GDIPMG 531 Score = 26.7 bits (52), Expect(3) = 3e-27 Identities = 17/33 (51%), Positives = 18/33 (54%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWL 876 LLT+FCR S *PL G *G ATL L Sbjct: 464 LLTVFCRIFLICLFDVSA*PLVCGW*GVATLCL 366 Score = 107 bits (229), Expect = 3e-22 Identities = 68/255 (26%), Positives = 121/255 (47%) Frame = -2 / -2 Query: 1296 ITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPI 1117 ++++E Y FV+P++ F +++ L SPF +++ + F++ V + D P+ Sbjct: 786 VSWLEFLDFYPFVMPAIRPFFVYPHVMVSLLSPFFKFSNLHFSPFSCSFKVHVPIPDGPV 607 Query: 1116 SFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLP 937 FV + R T L +++ + H++G L C+ + P S ID LL + DL Sbjct: 606 CFVLKFYR*ST*LLVDYLLGGHSNGCLVRCPVCLQCVRQSILPSYSHFIDRLLQNILDLF 427 Query: 936 ITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLN 757 + LT L M+R + + LS + E +NEV T +++ R +K WE D +HL Sbjct: 426 V*CFCLTAGLWMVRSGHVVFGSHLS*EVLEGFVNEVRTSVTYDHPRGTKPWEDDFCEHLL 247 Query: 756 GGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTL 577 G + + SL P D++ + +V G RE SH + +I++ + + +T Sbjct: 246 GMLRFRGTAWHSLNPFGDIVDYHQNVLAVAGLREGSHKVYTPNIEYLELHIVCEGYCITS 67 Query: 576 SDIPYSLAFVTRQDK 532 SD LA D+ Sbjct: 66 SDSSLPLATCASSDE 22 Score = 28.6 bits (56), Expect(2) = 2.5 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PK+W P* * RF+LH Sbjct: 264 NHLPKVWYP*DGHK*RRFSLH 326 Score = 23.5 bits (45), Expect(2) = 2.5 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 / +3 Query: 627 CLGL*LYGTIP 659 CLG LYGT+P Sbjct: 117 CLGYRLYGTLP 149
>LOC_Os04g16850:12004.t01440:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4182 Score = 177 bits (382), Expect(4) = e-100 Identities = 70/126 (55%), Positives = 91/126 (72%) Frame = +1 / +1 Query: 955 LQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 LQK VN+ W KL DALWAY TA K P+GMSPY++VY K+C LELEH+AYWAI+ Sbjct: 2908 LQKTVNKMGTGWKDKLPDALWAYRTA*KTPIGMSPYQIVYRKSC*LLLELEHRAYWAIRN 3087 Query: 1135 LNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYN 1314 N DF+ A E I+ L+EWR +AY NAK++KE+ KRWHDKRI+ ++ GD VL++N Sbjct: 3088 WNMDFEGAREWRKLQITELEEWREKAYHNAKIYKERTKRWHDKRIKIKKIKPGDKVLMFN 3267 Query: 1315 SRLRFF 1332 SR++ F Sbjct: 3268 SRVKLF 3285 Score = 134 bits (287), Expect(4) = e-100 Identities = 47/96 (48%), Positives = 68/96 (70%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ Q GF+WP +++D+ +F+ C CQ+ G IT R MP+ Y+L ++ Sbjct: 1225 YGGHYGALRTQAKI*QCGFFWPIMYEDSEEFIRRCPSCQKEGGITTRDAMPLTYNLQVEI 1404 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIP 729 FD G D+MGPFP S+ Y ++LV VDYV+KWVEA+P Sbjct: 1405 FDFWGIDFMGPFPKSHNYEYILVVVDYVSKWVEAMP 1512 Score = 94.1 bits (199), Expect(4) = e-100 Identities = 37/70 (52%), Positives = 48/70 (68%) Frame = +1 / +2 Query: 739 ADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSG 918 AD + KM *+IFP FG PR +++D GSHFI FR +L H VA+PYHPQ+SG Sbjct: 2693 ADEKHAKKMFT*IIFPMFGTPRMVISDGGSHFIDKTFRDLLRDMGAKHNVATPYHPQTSG 2872 Query: 919 QVELSNREIK 948 Q E+SN++IK Sbjct: 2873 QAEMSNKQIK 2902 Score = 37.3 bits (75), Expect(4) = e-100 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + GN +V Sbjct: 3283 FGHGKLHSKWEGPFDVIDTSSHGAITLRDDSGNIFKV 3393 Score = 66.6 bits (139), Expect(4) = 4e-22 Identities = 33/116 (28%), Positives = 59/116 (50%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++ Y F++P+L F L ++IC SPF D++ P + F++ + + D Sbjct: 3258 QHFVSWLYFLNFYPFIMPTLRPFFVYLSVVICFFSPFFKFGDLQFPPFSCSFKVHIPVPD 3079 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL 958 PI V + +E L +++ I H++G L *C+ +F P S +D LL Sbjct: 3078 GPICSVLEF*KESA*LPVDYLIGRHSNGCLLCCPVCP*CVRQFILPSCSHFVDRLL 2911 Score = 52.4 bits (108), Expect(4) = 4e-22 Identities = 29/63 (46%), Positives = 36/63 (57%) Frame = -3 / -1 Query: 920 *PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*S 741 *PL G *G ATL L RK MKCEP S++ LG PN+G M Y++I + + S Sbjct: 2874 *PLVCGW*GVATLCLAPMSRRRSRKVLSMKCEPPSLMTILGVPNIGKMIYVNIFLACFSS 2695 Query: 740 AFL 732 A L Sbjct: 2694 AVL 2686 Score = 31.8 bits (63), Expect(4) = 4e-22 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R+VI P W N S +GQ KP C L V S PP* Sbjct: 1376 GIASRVVIPPSFWQLGHLLMNSSESSYIIGQKKPHCQILAWVRSAP*CPP* 1224 Score = 27.6 bits (54), Expect(4) = 4e-22 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = -3 / -2 Query: 728 GIASTHLVT*STATK 684 GIASTHL T*ST T+ Sbjct: 1511 GIASTHLDT*STTTR 1467 Score = 57.4 bits (119), Expect(2) = 4e-14 Identities = 41/97 (42%), Positives = 49/97 (50%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP I LSC SL LA YA+ LHSS+ +I + S A Sbjct: 3284 KSLTLELNISTLSPGFIFLIFILLSCQRFVLSLYILAL*YAFSLHSSSSVICSFLHSLAP 3105 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS+ *TI GD+PMG Sbjct: 3104 SKSIFQFLMAQYALCSSSKRSQHDFL*TI**GDIPMG 2994 Score = 42.3 bits (86), Expect(2) = 4e-14 Identities = 21/60 (35%), Positives = 37/60 (61%) Frame = -2 / -3 Query: 921 LTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVI 742 LT L M+R + ++ +S+ ++E ++EV T I++ R +K WE DL +HL G ++I Sbjct: 2875 LTAGLWMVRCGHVVLGSHVSKEVSEGFVDEVRTTITYDHPRGTKHWENDLCEHLLGMLLI 2696
>LOC_Os10g24470:12010.t01872:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2004 Score = 256 bits (554), Expect(3) = 1e-98 Identities = 99/186 (53%), Positives = 130/186 (69%) Frame = +1 / +1 Query: 775 VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLI 954 +IFPRFG R +++D GSHFI F +L H +A PYHPQ+SG+ E SN++IK I Sbjct: 262 IIFPRFGTHRMVISDGGSHFIDKTF*GLLQDMGAKHNMAVPYHPQTSGRAETSNKQIKNI 441 Query: 955 LQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 LQK VN+ W KL DALWAY AYK + MSPY++ YGK C P+ELEH+AYW I+ Sbjct: 442 LQKTVNKMETGWKDKLSDALWAYQIAYKTSIEMSPYQIAYGKPCRLPVELEHRAYWPIRN 621 Query: 1135 LNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYN 1314 N DF+ AGE I+ L+EWR +AY+NAK++KE+ KRWHDKRI+ R+ GD VL++N Sbjct: 622 WNMDFEGAGEWMKIQIAELEEWREKAYDNAKIYKERTKRWHDKRIKIRKLKPGDKVLMFN 801 Query: 1315 SRLRFF 1332 SR++ F Sbjct: 802 SRVKLF 819 Score = 111 bits (238), Expect(3) = 1e-98 Identities = 43/87 (49%), Positives = 61/87 (70%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV C CQR+G IT R EMP+ Y+L ++ FDV G D+M PFP S ++LV Sbjct: 1 MYEDSKEFVRRCPSCQRLGGITARDEMPLAYNLQVEIFDVWGIDFMRPFPESRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK 771 AVDYV+KWVEA+P AD + K +K Sbjct: 181 AVDYVSKWVEAMPCSAADVKHAKKFIK 261 Score = 33.6 bits (67), Expect(3) = 1e-98 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGN 1425 F G+L +KWEGP+ + + G I + + GN Sbjct: 817 FGHGKLRNKWEGPFDVIDTSSHGVITLRDDSGN 915 Score = 69.3 bits (145), Expect(3) = 3e-27 Identities = 43/96 (44%), Positives = 48/96 (50%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP N I LSC SL LA SYA+ LHSS+ I SPA Sbjct: 818 KSLTLELNISTLSPGFNFLIFILLSCQRFVLSLYILALSYAFSLHSSSSAICIFIHSPAP 639 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPM 1044 L+ Q ALCSSS G P* I YGD+ M Sbjct: 638 SKSIFQFLMGQYALCSSSTGSRHGFP*AI*YGDISM 531 Score = 49.6 bits (102), Expect(3) = 3e-27 Identities = 29/72 (40%), Positives = 36/72 (50%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S PL G *G A L L +K MKCEP S++ L Sbjct: 461 LLTVFCRIFLICLFDVSARPLVCGW*GTAMLCLAPMSCRRPQKVLSMKCEPPSLMTIL*V 282 Query: 794 PNLGNMTYLSIL 759 PNLG M +++ L Sbjct: 281 PNLGKMIFMNFL 246 Score = 42.8 bits (87), Expect(3) = 3e-27 Identities = 24/41 (58%), Positives = 27/41 (65%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+ + G G I S P+TSN Sbjct: 233 SAALHGIASTHLET*STATRIYSQLRDSGKGLIKSIPQTSN 111 Score = 68.9 bits (144), Expect(3) = 1e-20 Identities = 42/137 (30%), Positives = 64/137 (46%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q +++ Y F++P+L F L I+ICL SPF +D+ F++ + + D Sbjct: 792 QHFVSWF*FPDFYPFIMPALRPFFVYLSIVICLLSPFFKFSDLYFHPFPCSFKVHIPVPD 613 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 PI V +L RE T L + + I H +G L C+ +F P +D LL + Sbjct: 612 GPICSVLELYRESTWLPVGNLIWGHFNGCLVCYLVCPQCVRQFILPSCFHFVDRLLQNIL 433 Query: 945 DLPITQLHLTTRLRMIR 895 DL I T L M+R Sbjct: 432 DLLI*CFCSTAGLWMVR 382 Score = 42.8 bits (87), Expect(3) = 1e-20 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = -2 / -1 Query: 723 SLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVT 544 SL PL D++ + ++ G R+ SH + +IK+F+ + + HF+T SD LA Sbjct: 213 SLNPLGDIVDCHQNILAVTGLRKRSHKVNTPNIKYFDLQVVCEGHFITSSDSS*PLAAWA 34 Query: 543 RQDK 532 DK Sbjct: 33 SSDK 22 Score = 27.2 bits (53), Expect(3) = 1e-20 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -2 / -1 Query: 852 AENTMNEV*TVISHQISRDSKSWEYDLFKHL 760 +E +NEV T +++ +K WE DL++ L Sbjct: 339 SEGFVNEVRTSVTYDHPMSTKPWEDDLYELL 247
>LOC_Os05g12620:12005.t01088:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4030 Score = 222 bits (480), Expect(3) = 2e-97 Identities = 91/190 (47%), Positives = 123/190 (64%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 Y G++ RT K+ SGF+WP ++ D ++FV C CQ+ G IT R MP+ Y+L ++ Sbjct: 3209 YVGHYGAFRTHAKIWWSGFFWP*MYDDTKEFVRRCTRCQKHGGITARDAMPLTYNLQVEL 3388 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPF S ++LVAVDYV+KWVEA+P + A+ + +M +IFPRFG P Sbjct: 3389 FDVWGIDFMGPFLKSYDCEYILVAVDYVSKWVEAMPCRAANTKHARRMFHEIIFPRFGTP 3568 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI F L + H +A+ YHPQ SGQ E SN++IK ILQK VN Sbjct: 3569 RMVISDGGSHFIDKTF*NFLQELGAQHNIATSYHPQISGQAETSNKQIKNILQKTVNEIG 3748 Query: 982 KNWSSKLDDA 1011 K W +KL DA Sbjct: 3749 KAWKNKLPDA 3778 Score = 132 bits (282), Expect(3) = 2e-97 Identities = 47/83 (56%), Positives = 62/83 (74%) Frame = +1 / +2 Query: 1015 WAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLD 1194 WAY TAYK P+GMSPY +VYGK + P++LEH+A+WAI+ N D K AG+ +S L+ Sbjct: 3779 WAYRTAYKTPIGMSPYHLVYGKTFHLPVQLEHRAHWAIRTWNMDLKKAGQHRKMQLSELE 3958 Query: 1195 EWRTQAYENAKLFKEKVKRWHDK 1263 EWR +AY NAK++KE+ KRW DK Sbjct: 3959 EWRDKAYHNAKIYKERTKRWDDK 4027 Score = 43.2 bits (88), Expect(3) = 2e-97 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KKK ++ R + WD P+LY+ DG++RR ++G Sbjct: 3062 ENKKKLIYESRRHLWDAPYLYRVCSDGLLRRCVPADEG 3175 Score = 54.7 bits (113), Expect(3) = 1e-14 Identities = 28/77 (36%), Positives = 45/77 (58%) Frame = -2 / -1 Query: 1266 SFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPISFVFQLKREI 1087 SF++PS FL LGI++ L PF+* ++ +L+G + V D P+ VFQL ++ Sbjct: 4030 SFIIPSFCSFLVDLGIVVGLVPPFL*LRELHLSVLSGFL*VHVPSPDSPVRPVFQLYWKV 3851 Query: 1086 TGLTINHFIR*HAHGIL 1036 L+++ + *HA G L Sbjct: 3850 KSLSVDKVVW*HADGRL 3800 Score = 50.1 bits (103), Expect(3) = 1e-14 Identities = 30/72 (41%), Positives = 38/72 (52%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 +K +P S+I G P G + +I A L GIASTHL T*STAT+ + Sbjct: 3603 IK*DPPSLITIRGVPKRGKIISWNIRRACLVFAALHGIASTHLDT*STATRIYSQS*DFR 3424 Query: 656 NGPI*SKPETSN 621 GP+ S P TSN Sbjct: 3423 KGPMKSMPHTSN 3388 Score = 25.8 bits (50), Expect(3) = 1e-14 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KP 492 GI+ R VI P WH +TN S GQ P Sbjct: 3360 GIASRAVIPPCFWHLVHLRTNSFVSSYIYGQKNP 3259 Score = 50.1 bits (103), Expect = 7e-05 Identities = 31/84 (36%), Positives = 36/84 (42%) Frame = +2 / +3 Query: 1013 YGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSSTLISNLPVRSGCLISAH* 1192 +G +GLLIR P ACH R SWNT G S T P + S * Sbjct: 3777 HGHIGLLIRRPSACHHTTLSTERLFTFQYSWNTGRTGLSGLGTWT*RKPDSTERCSSLS* 3956 Query: 1193 MNGEPRHMRMPSCSRKRLRDGTTN 1264 NG R MP +RK +DG N Sbjct: 3957 RNGGTRPTTMPRSTRKEQKDGMIN 4028 Score = 44.6 bits (91), Expect = 0.003 Identities = 21/40 (52%), Positives = 24/40 (60%) Frame = -3 / -2 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS+ G+*+ P*T YGDMPMG Sbjct: 3924 PAFFKSMFQVRIAQCALCSNCTGR*KVFP*TRWYGDMPMG 3805 Score = 36.8 bits (74), Expect = 0.69 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPI 1013 P+ CVP + + + VTC W SYKQS+ P+ Sbjct: 3887 PSAPCVPTVLEGEKSFRRQGGMVTCRWASYKQSYMPM 3777
>LOC_Os04g07944:12004.t00670:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4066 Score = 259 bits (560), Expect(4) = 3e-97 Identities = 103/184 (55%), Positives = 132/184 (71%) Frame = +1 / +2 Query: 613 IKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRF 792 ++ FDV G D+MGPFP S ++LVAVDYV+K VEA+P AD + KM +IFPRF Sbjct: 3512 VEIFDVWGIDFMGPFPKSRNCEYILVAVDYVSK*VEAMPCSAADARYAKKMFTEIIFPRF 3691 Query: 793 GVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVN 972 G+PR +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQKIVN Sbjct: 3692 GIPRMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETSNKQIKNILQKIVN 3871 Query: 973 RSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFK 1152 + W +L D LWAY TAYK P+GMSPY++VYGK+ P+ELEH+AYW I+ N DF+ Sbjct: 3872 KMGTGWKDRLPDTLWAYRTAYKTPIGMSPYQIVYGKSYRLPVELEHRAYWTIRNWNMDFE 4051 Query: 1153 LAGE 1164 AGE Sbjct: 4052 GAGE 4063 Score = 80.8 bits (170), Expect(4) = 3e-97 Identities = 28/56 (50%), Positives = 40/56 (71%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSL 609 YGG++ RT K+ QSGF+WPT+++D+++FV C CQR G IT R MP+ Y+L Sbjct: 3342 YGGHYGAFRTQAKIWQSGFFWPTMYEDSKEFVRRCTSCQRQGEITARDVMPLTYNL 3509 Score = 39.6 bits (80), Expect(4) = 3e-97 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA+ NY+V+KYIPP Sbjct: 3135 SNPWYANIVNYMVSKYIPP 3191 Score = 36.3 bits (73), Expect(4) = 3e-97 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +2 / +3 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ R + WD+P+LY+ DG+++R ++G Sbjct: 3207 KLKYESRRHIWDEPYLYRVYSDGLLQRCVPTDEG 3308 Score = 93.2 bits (197), Expect(4) = 9e-30 Identities = 58/118 (49%), Positives = 67/118 (56%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLTIFCR S *PL G *G ATL L RK MK EP S++ LG Sbjct: 3873 LLTIFCRIFLICLFDVSA*PLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGI 3694 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIAST+L T*STAT+ +LG GPI S P+TSN Sbjct: 3693 PNLGKMISVNIFLAYLASAALHGIASTYLET*STATRMYSQLRDLGKGPIKSIPQTSN 3520 Score = 42.3 bits (86), Expect(4) = 9e-30 Identities = 22/41 (53%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 1163 SPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 SPA L+ Q ALCSSS G P*TI YGD+PMG Sbjct: 4062 SPAPSKSMFQFLMVQYALCSSSTGSRYDFP*TI*YGDIPMG 3940 Score = 34.5 bits (69), Expect(4) = 9e-30 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = -3 / -1 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + +PP* Sbjct: 3493 GITSRAVISPCLWQLVHLLTNSFESSYIVGQKKPLCQILAWVRNAP*WPP* 3341 Score = 34.5 bits (69), Expect(4) = 9e-30 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 / -3 Query: 283 WYVFGYDIVCIIGIPR 236 WYVFGY +V +GIPR Sbjct: 3188 WYVFGYHVVYYVGIPR 3141 Score = 71.6 bits (150), Expect(2) = 1e-12 Identities = 54/185 (29%), Positives = 90/185 (48%) Frame = -2 / -1 Query: 1161 TGKFEIKVELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPIL 982 + +I V + D P+ V + L +++ I H++G L *CI + P Sbjct: 4060 SSSLKIHVPVPDGPVCSVLKFYG*SI*LPVDYLIWGHSNGCLVRCPVCP*CIRQSILPSC 3881 Query: 981 SRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQIS 802 S +D LL*+ DL + LTT L M+R + + LS ++E +NEV T +++ Sbjct: 3880 SHFVDYLL*NILDLFV*CFCLTTGLWMVRSGHIVFGTHLS*EVSEGFVNEVRTSVTYDHP 3701 Query: 801 RDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIK 622 ++KSWE D +HL G I + SL L D++ +*+V RE H + +I+ Sbjct: 3700 GNTKSWEDDFCEHLLGIPRIRGAARHSLNLLGDIVDCH*NVLAVARLRERPHKVYTPNIE 3521 Query: 621 WFNDK 607 + + K Sbjct: 3520 YLDCK 3506 Score = 29.5 bits (58), Expect(2) = 1e-12 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -1 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 3190 GGMYLDTM*FTMLAYHG 3140 Score = 32.2 bits (64), Expect(2) = 5.3 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +2 / +3 Query: 893 LLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIK 1066 LL I VVK RS Y+R S E+ G + +HYG G R P C I+ Sbjct: 3792 LLTIHRPVVKQKHQTNRSRIFYRR*STKWEQDGRIDCRIHYGHTGQRTRHPLECPHIR 3965 Score = 25.4 bits (49), Expect(2) = 5.3 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 / +2 Query: 238 VVCRLCKLYRSQIHTTQ 288 VVC+ KL+ QIHTT+ Sbjct: 3143 VVCQHSKLHGIQIHTTR 3193
>LOC_Os02g24990:12002.t02196:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1928 Score = 255 bits (552), Expect(3) = 8e-97 Identities = 100/185 (54%), Positives = 133/185 (71%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 IFPRFG PR +++D GSHFI FR +L + H VA+PYHP +SGQ E SN++IK L Sbjct: 265 IFPRFGTPRMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHP*TSGQAETSNKQIKNTL 444 Query: 958 QKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKEL 1137 QK VN W +L +AL A+ TAYK P+GMSPY++VYG +C P+ELEH+AYWAIK Sbjct: 445 QKTVNNMGTRWKDRLPNAL*AFRTAYKTPIGMSPYQIVYGMSCRLPVELEHRAYWAIKN* 624 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNS 1317 N DF+ AGE I+ L++W +AY NAK++KE+ KRWHDKRI+ ++F GD VL++NS Sbjct: 625 NMDFEGAGEWRKMQIAKLEKWGEKAYHNAKIYKERTKRWHDKRIKIKKFKPGDKVLMFNS 804 Query: 1318 RLRFF 1332 R++ F Sbjct: 805 RVKLF 819 Score = 107 bits (228), Expect(3) = 8e-97 Identities = 42/85 (49%), Positives = 59/85 (69%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV C CQR G IT R MP+ Y+L ++ FDV G D+MGPFP S+ ++LV Sbjct: 1 MYEDSKEFVRRCTSCQRQGGITGRDAMPLTYNLHVEIFDVWGIDFMGPFPKSHNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKM 765 AVDYV+KWVEA+ AD + KM Sbjct: 181 AVDYVSKWVEAMSCSAADARHAKKM 255 Score = 32.7 bits (65), Expect(3) = 8e-97 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWE P+ + + GAI + + G+ +V Sbjct: 817 FGHGKLRSKWEAPFDVIDTSSHGAITLRDDSGDIFKV 927 Score = 62.0 bits (129), Expect(3) = 9e-26 Identities = 43/97 (44%), Positives = 49/97 (50%) Frame = -3 / -1 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I LSC SL A A+ H S+ I SPA Sbjct: 818 KSLTLELNISTLSPGLNFLIFILLSCQRFVLSL*IFALW*AFSPHFSSLAICIFLHSPAP 639 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G +P*TI YGD+PMG Sbjct: 638 SKSMF*FLMAQYALCSSSTGSRHDIP*TI*YGDIPMG 528 Score = 48.7 bits (100), Expect(3) = 9e-26 Identities = 30/67 (44%), Positives = 35/67 (52%) Frame = -3 / -1 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L RK MK EP S++ LG Sbjct: 461 LLTVFCRVFLICLFDVSA*PLVYGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGV 282 Query: 794 PNLGNMT 774 PNLG ++ Sbjct: 281 PNLGKIS 261 Score = 46.0 bits (94), Expect(3) = 9e-26 Identities = 25/41 (60%), Positives = 28/41 (68%) Frame = -3 / -1 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L IASTHL T*STAT+ +LG GPI S P+TSN Sbjct: 233 SAALHDIASTHLET*STATRMYSQL*DLGKGPIKSIPQTSN 111 Score = 83.5 bits (176), Expect = 6e-15 Identities = 51/175 (29%), Positives = 87/175 (49%) Frame = -2 / -3 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E Y FV+P+L F L +++ SPF +D+ +G F+I V + D Sbjct: 792 QYFVSWLEFLDFYPFVMPALRPFFVNLCVVVGFLSPFFKLSDLHFSPFSGSFKIHVLVLD 613 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + T ++++ I H++G L C+ + P S +D LL F Sbjct: 612 GPVCSVLKFYG*ST*HSVDYLIWGHSNGCLVCCPECSQCVRQSILPSCSHIVDRLLQSIF 433 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWE 781 DL + LTT L M+R + + LS ++E +NEV T +++ +KSWE Sbjct: 432 DLFV*CFCLTTGLWMVRSGHIVFGSHLS*EVSEGFVNEVRTSVTYDHPGGTKSWE 268 Score = 29.9 bits (59), Expect(2) = 1.4 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 / +3 Query: 531 VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 +C + ++P+ R H + NA + I CLG LYGT P Sbjct: 21 ICQKMHKLPEARRNHWSRCNAPHIQFACRDIRCLGYRLYGTFP 149 Score = 23.1 bits (44), Expect(2) = 1.4 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +3 / +3 Query: 777 HIPKIWSP*IFDD**RFTLH 836 ++PKIW P * RF+LH Sbjct: 264 NLPKIWYPQDGHK*RRFSLH 323
>LOC_Os08g26660:12008.t02430:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2164 Score = 341 bits (738), Expect(2) = 1e-95 Identities = 132/248 (53%), Positives = 176/248 (70%) Frame = +1 / +1 Query: 589 MPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 MP+ Y+L ++ FDV G D+MGPFP S ++LVAVDYV+KW+EA+P AD + KM Sbjct: 1 MPLTYNLQVEIFDVRGIDFMGPFPKSRNCEYILVAVDYVSKWIEAMPCSAADARHAKKMF 180 Query: 769 K*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIK 948 IF RFG PR +++D GSHFI FR +L + H VA+PYHPQ+SGQ E N++IK Sbjct: 181 TETIFLRFGTPRMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETLNKQIK 360 Query: 949 LILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAI 1128 I+QK V + W +L DALWAY T YK P+GMSPY++VYGK+ P+ELEH+AYWAI Sbjct: 361 NIMQKTVKKMGTGWKDRLSDALWAYRTVYKTPIGMSPYQIVYGKSYRLPVELEHRAYWAI 540 Query: 1129 KELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLL 1308 + N DF+ AGE I+ L+EWR +AY NAK++KE+ KRWHDKRI+ ++F GD VL+ Sbjct: 541 RNWNMDFEGAGEWRKMQIAELEEWREKAYHNAKIYKERTKRWHDKRIKIKKFKPGDKVLM 720 Query: 1309 YNSRLRFF 1332 +NSR++ F Sbjct: 721 FNSRVKLF 744 Score = 31.8 bits (63), Expect(2) = 1e-95 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+ SKWEGP+ + + GAI + + N +V Sbjct: 742 FGHGKPRSKWEGPFDVIDTSSHGAITLRDDSSNIFKV 852 Score = 82.2 bits (173), Expect(2) = 7e-30 Identities = 53/117 (45%), Positives = 62/117 (52%) Frame = -3 / -3 Query: 971 LTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTP 792 LT+FC S *PL G *G ATL L RK MK EP S++ LG P Sbjct: 383 LTVFCIIFLICLFNVSA*PLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGVP 204 Query: 791 NLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 NL M ++I + SA L GIAS HL T*STAT+ +LG GP+ S P TSN Sbjct: 203 NLRKMVSVNIFLACLASAALHGIASIHLET*STATRMYSQLRDLGKGPMKSIPRTSN 33 Score = 70.7 bits (148), Expect(2) = 7e-30 Identities = 45/97 (46%), Positives = 50/97 (51%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I LSC SL A A+ LHSS+ I SPA Sbjct: 743 KSLTLELNISTLSPGLNFLILILLSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 564 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 563 SKSMFQFLMAQYALCSSSTGSRYDFP*TI*YGDIPMG 453 Score = 87.7 bits (185), Expect = 3e-16 Identities = 66/231 (28%), Positives = 109/231 (47%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E SFV+P+L F L I++ L PF +D+ + F+I V + D Sbjct: 717 QYFVSWLEFLDFDSFVMPALRPFFVYLRIVVSLLPPFFKFSDLHFSPFSCSFKIHVPVSD 538 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + L +++ I H++G L *C+ + P S D LL + Sbjct: 537 GPVCSVLKFYG*SI*LPVDYLIWGHSNGCLVHCPVCP*CVRQSILPSCSHFFDRLLHNIL 358 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + LTT L M+R + + LS ++E +NEV T +++ +KS E + Sbjct: 357 DLFVQCFCLTTGLWMVRSGHIVFGSHLS*EVSEGFVNEVRTSVTYDHPGGTKS*EDGFCE 178 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFN 613 HL G I + SL PL D++ + +V RE SH + I++ N Sbjct: 177 HLLGMPRIRGAARHSLNPLGDIVDCHQNVLAVARLRERSHEVYTPHIEYLN 25 Score = 27.2 bits (53), Expect(3) = 0.010 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = +2 / +2 Query: 893 LLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIK 1066 LL I VVK +S KR S E+ G + HYG G R P C I+ Sbjct: 305 LLTIHRPVVKQKH*TNKSRILCKRRSKKWEQDGRIDCRTHYGHTGQCTRHPLECPHIR 478 Score = 26.7 bits (52), Expect(3) = 0.010 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P * RF+LH Sbjct: 186 NHLPKIWYPQDGHK*RRFSLH 248 Score = 22.6 bits (43), Expect(3) = 0.010 Identities = 12/44 (27%), Positives = 16/44 (36%) Frame = +1 / +1 Query: 1111 KAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEK 1242 K+Y EL A W D EWR + ++EK Sbjct: 490 KSYRLPVELEHRAYWAIRNWNMDFEGAGEWRKMQIAELEEWREK 621
>LOC_Os04g16630:12004.t01421:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7021 Score = 322 bits (698), Expect(4) = 2e-95 Identities = 130/273 (47%), Positives = 179/273 (65%) Frame = +1 / +1 Query: 514 FKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVA 693 ++D+++FV C R IT R +P+ Y+L ++ FDV G D+MGPF S ++LVA Sbjct: 1207 YEDSKEFVRRRPSCLRQRGITARDAIPLTYNLQVEIFDVWGIDFMGPFL*SRNCEYILVA 1386 Query: 694 VDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYD 873 VDYV+KWVEA AD M +IFPRFG PR +++D G HFI FR +L Sbjct: 1387 VDYVSKWVEAKLCSAADAKHDKNMFLEIIFPRFGTPRLVISDGGLHFIDETFRHLLRDMG 1566 Query: 874 VNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGM 1053 H VA+PY+PQ+SGQ E SN++IK ILQK VN+ W KL DALW+Y TA+ P+GM Sbjct: 1567 AKHNVATPYYPQTSGQAETSNKQIKNILQKTVNKMGIGWKDKLPDALWSYRTAFMTPIGM 1746 Query: 1054 SPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLF 1233 SPY +VYGK+C P+E EH+AYW I+ DF AGE ++ L+EWR + Y N+K++ Sbjct: 1747 SPYHIVYGKSCRLPVEQEHRAYWTIRNWIMDFDGAGEWRKMQLAELEEWREKVYHNSKIY 1926 Query: 1234 KEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 E+ KRWHDK+I+ ++F D VL++NSR++ F Sbjct: 1927 TERTKRWHDKQIKIKKFKPRDKVLMFNSRVKLF 2025 Score = 36.8 bits (74), Expect(4) = 2e-95 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S+PWYA+ NY+V+KYI P ++ K Sbjct: 798 SSPWYANIVNYMVSKYILPGENQRKLK 878 Score = 36.3 bits (73), Expect(4) = 2e-95 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGN 1425 F G+L SKWEG + I + GAI ++N GN Sbjct: 2023 FGHGKLRSKWEGQFDIIDTSSHGAITLHNDSGN 2121 Score = 33.1 bits (66), Expect(4) = 2e-95 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ + DDP+LY+ DG++RR ++G Sbjct: 858 ENQRKLKYESHRHI*DDPYLYRICFDGLLRRCVSTKEG 971 Score = 86.3 bits (182), Expect(2) = 6e-26 Identities = 49/97 (50%), Positives = 57/97 (58%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL *G**G ATL L RK MKC+P S++ LG Sbjct: 1667 LLTVFCRIFLICLFDVSA*PLV*G**GVATLCLAPISRRRCRKVSSMKCKPPSLMTNLGV 1488 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATK 684 PNLG M +I + + SA L +ASTHL T*STATK Sbjct: 1487 PNLGKMISKNIFLSCFASAALHSLASTHLDT*STATK 1377 Score = 53.3 bits (110), Expect(2) = 6e-26 Identities = 39/97 (40%), Positives = 45/97 (46%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T S LN I LSC S+ L Y + LHSS+ SPA Sbjct: 2024 KSLTLELNISTLSLGLNFLIFICLSCQRFVLSVYILEL*YTFSLHSSSSANCIFLHSPAP 1845 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+ Q A CS S G LP*TI GD+PMG Sbjct: 1844 SKSMIQFLMVQYARCSCSTGSRHDLP*TI**GDIPMG 1734 Score = 68.9 bits (144), Expect(4) = 4e-15 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 Y G++ R K+ Q GF+W T+++D+++FV C R G IT R +P+ Y+L ++ Sbjct: 1005 YDGHYGAFRMQAKIWQCGFFWLTMYEDSKEFVRRRPSCLRQGGITARDAIPLTYNLQVEI 1184 Query: 622 FDVSGFD 642 FDV G D Sbjct: 1185 FDVWGID 1205 Score = 35.0 bits (70), Expect(4) = 4e-15 Identities = 29/85 (34%), Positives = 38/85 (44%) Frame = +2 / +2 Query: 896 LIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFM 1075 L IL VK +S Y+R S G + MHYG G P C I FM Sbjct: 1589 LTILRPAVKQKHQTNKSKIFYRRRSTKWA*DGRTSCQMHYGHTGQRS*HPLECPLII*FM 1768 Query: 1076 VRPVISLLSWNTKLIGQSKSSTLIS 1150 V V S + +T+ IG S++ + IS Sbjct: 1769 VSHVDSP*NKSTEHIGPSETGSWIS 1843 Score = 27.2 bits (53), Expect(4) = 4e-15 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P I * R LH Sbjct: 1467 NHLPKIWHPKIGHK*WRLALH 1529 Score = 24.9 bits (48), Expect(4) = 4e-15 Identities = 8/26 (30%), Positives = 12/26 (46%) Frame = +1 / +1 Query: 1168 WLFDISSLDEWRTQAYENAKLFKEKV 1245 W+ D EWR + ++EKV Sbjct: 1828 WIMDFDGAGEWRKMQLAELEEWREKV 1905 Score = 50.1 bits (103), Expect(2) = 2e-06 Identities = 28/84 (33%), Positives = 46/84 (54%) Frame = -2 / -2 Query: 1011 CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNE 832 CI + P + +D LL*+ FDL + LT LR++R N + +S ++E ++E Sbjct: 1704 CIWQLVLPSYAHFVDRLL*NIFDLFV*CFCLTAGLRIVRCSNIVFGAHIS*EVSEGFVDE 1525 Query: 831 V*TVISHQISRDSKSWEYDLFKHL 760 V I++ S +KSWE D +H+ Sbjct: 1524 VQASITYDQSWGAKSWEDDF*EHI 1453 Score = 23.5 bits (45), Expect(2) = 2e-06 Identities = 14/42 (33%), Positives = 16/42 (38%) Frame = -1 / -1 Query: 1120 NKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 N L G + YHK + T W S S IVH C Sbjct: 1813 NMLGALVLRGVDMTYHKLYDKGTFQWVS*TLSGMTIVHLAAC 1688
>LOC_Os05g29700:12005.t02570:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3898 Score = 315 bits (683), Expect(3) = 3e-94 Identities = 120/230 (52%), Positives = 162/230 (70%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WP+++ D ++F+ C CQ+ G IT R MP+ Y+L ++ Sbjct: 3203 YGGHYGAFRTHAKIWQSGFFWPSMYDDTKEFIRRCTSCQKHGGITARDAMPLTYNLQVEL 3382 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P + AD + M +IFPRF Sbjct: 3383 FDVWGIDFMGPFPKSYDCEYILVAVDYVSKWVEAMPCRAADAKHARWMFHEIIFPRFRTL 3562 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHF+ FR L + H A+PYHPQ+SGQ E SN++IK ILQK +N Sbjct: 3563 RMVISDGGSHFVDKTFRNFLKELGARHNSATPYHPQTSGQAETSNKQIKNILQKTINEMG 3742 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIK 1131 K W +KL DALWAY TAYK P+GMSPY++VYGK C+ P+ELEH+A+WAI+ Sbjct: 3743 KAWKNKLPDALWAYRTAYKTPVGMSPYQLVYGKTCHLPVELEHRAHWAIR 3892 Score = 36.8 bits (74), Expect(3) = 3e-94 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 + KK+ ++ R + WD P+LY+ DG++ R ++G + K Sbjct: 3056 ENKKRLIYESRRHLWDAPYLYRVCSDGLL*RCVLVDEGMKIIK 3184 Score = 34.5 bits (69), Expect(3) = 3e-94 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ + S PWYA N++VA ++PP Sbjct: 2978 LLKVTDSDPWYATIVNFMVAGHVPP 3052 Score = 62.9 bits (131), Expect(2) = 1e-16 Identities = 46/117 (39%), Positives = 53/117 (45%) Frame = -3 / -2 Query: 971 LTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTP 792 L +FCR S PL G* G A L RK KC+P S+I Sbjct: 3732 LIVFCRMFLICLLLVSACPLVWG*YGVALLCRAPSSFKKFRKVLSTKCDPPSLITIRRVL 3553 Query: 791 NLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 G + +I SA L GIASTHL T*STAT+ + G GPI S P TSN Sbjct: 3552 KRGKIISWNIQRACLASAALHGIASTHLDT*STATRMYSQS*DFGKGPIKSMPHTSN 3382 Score = 45.5 bits (93), Expect(2) = 1e-16 Identities = 20/29 (68%), Positives = 22/29 (75%) Frame = -3 / -2 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ ALCS+S G+*Q P*T YGDMP G Sbjct: 3888 IAQCALCSNSTGR*QVFP*TSWYGDMPTG 3802 Score = 49.2 bits (101), Expect = 1e-04 Identities = 28/77 (36%), Positives = 38/77 (49%) Frame = -2 / -1 Query: 1128 DCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQ 949 D P+ VFQL ++T L ++ + *HA G L CI P L ID LL + Sbjct: 3889 DSPVRPVFQLYWKVTSLPVDKLVW*HADGCLISSPICPKCIR*LVLPCLPHLIDSLLQNV 3710 Query: 948 FDLPITQLHLTTRLRMI 898 DL + + L+T L MI Sbjct: 3709 LDLFVARFCLSTCLGMI 3659 Score = 44.6 bits (91), Expect(2) = 6e-04 Identities = 24/57 (42%), Positives = 29/57 (50%) Frame = +2 / +3 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQS 1129 +R S+ R G + MH+G +GLLIR P ACH R V SWNT G S Sbjct: 3720 RRLSMRWGRHGRTSYLMHFGHIGLLIRHPSACHHTNLSTGRLVTFQ*SWNTGRTGLS 3890 Score = 26.7 bits (52), Expect(2) = 6e-04 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 / +1 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIPE 662 ++P+ H + +A ++ TI*C+G LYGT P+ Sbjct: 3310 KLPEAWRDHCSRCDATDIQPSSRTI*CMGHRLYGTFPK 3423 Score = 36.3 bits (73), Expect(2) = 0.27 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = +3 / +1 Query: 942 DQIDPTKDRQ*ISKELV*QT*RCTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLL 1121 +Q +D Q* + + Q CT+G+ DCL*++ HVT+ L L S GTQ L Sbjct: 3703 NQEHSAEDYQ*DGEGMEEQAT*CTLGI*DCL*DTRRHVTIPTCLREDLSPSSRVGTQGAL 3882 Query: 1122 G 1124 G Sbjct: 3883 G 3885 Score = 25.8 bits (50), Expect(2) = 0.27 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 / +3 Query: 572 SLSVRKCL*TIHLSLNHLMSRALIIWDHSRVPM 670 SL +C * N+LM A +WD S+ PM Sbjct: 3333 SLLEMRCH*HTTFKSNYLMYGASTLWDLSQSPM 3431 Score = 36.3 bits (73), Expect(2) = 0.87 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP ++ + VTC SYKQS+ P VH+ C Sbjct: 3884 PSAPCVPTLLEGDKSSRRQVGMVTCRRVSYKQSYMPKVHQVAC 3756 Score = 24.0 bits (46), Expect(2) = 0.87 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -2 / -1 Query: 759 NGGVVISIFSGDSLYPLSDVIHSN 688 +GG +I DSL L D IHS+ Sbjct: 2551 SGG*IIGAEMSDSLRILKDFIHSS 2480
>LOC_Os04g17574:12004.t01508:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3487 Score = 167 bits (359), Expect(4) = 6e-93 Identities = 65/136 (47%), Positives = 92/136 (67%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+++FV C R IT R MP+ Y+L ++ Sbjct: 2726 YGGHYGAFRTQAKIWQSGFFWPTMYEDSKEFVRGCTSYHRQRGITARDAMPVTYNLQVEI 2905 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D++GPFP S+ + ++LVAVDYV+KWVEA+P AD + KM +IFP G P Sbjct: 2906 FDVWGIDFIGPFPKSHNF*YILVAVDYVSKWVEAMPCSVADVKHAKKMFTEIIFPSIGTP 3085 Query: 802 RYLMTDDGSHFIHGVF 849 R ++TD GSHF+ F Sbjct: 3086 RMVITDRGSHFMDKTF 3133 Score = 155 bits (334), Expect(4) = 6e-93 Identities = 58/108 (53%), Positives = 77/108 (71%) Frame = +1 / +2 Query: 880 HRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSP 1059 H V +PYHPQ+SG+ E SN++IK ++QK VN+ W +L A WAY T YK P+GMSP Sbjct: 3161 HNVTTPYHPQTSGKAETSNKQIKNVMQKTVNKMGTGWKDRLPHAPWAYRTTYKTPIGMSP 3340 Query: 1060 YKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWR 1203 Y++VY K+C P+ELEH+AYWAI+ N DF+ AGE I+ L+EWR Sbjct: 3341 YQIVYRKSCRLPVELEHRAYWAIRNWNMDFEGAGEWRKVQIAGLEEWR 3484 Score = 42.3 bits (86), Expect(4) = 6e-93 Identities = 12/38 (31%), Positives = 26/38 (68%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ RH+ WD+P+LY+ DG+++R ++G Sbjct: 2579 ENERKIKYESRHHIWDEPYLYRVCSDGLLQRCVPADEG 2692 Score = 35.9 bits (72), Expect(4) = 6e-93 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +2 Query: 230 SAPWYADYANYIVAKYIP 283 S PWYA+ NY+V+KYIP Sbjct: 2519 SNPWYANIMNYMVSKYIP 2572 Score = 57.9 bits (120), Expect(5) = 1e-18 Identities = 29/51 (56%), Positives = 35/51 (68%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATK 684 MK EP SV+ LG P LG M ++I + + SA L GIASTHL T*STAT+ Sbjct: 3120 MKWEPLSVMTILGVPILGKMISVNIFLACFTSATLHGIASTHLET*STATR 2968 Score = 41.8 bits (85), Expect(5) = 1e-18 Identities = 26/54 (48%), Positives = 29/54 (53%) Frame = -3 / -2 Query: 1202 LHSSNELISNNHFSPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 LHSS+ I SPA L+AQ ALCSSS G *TI GD+PMG Sbjct: 3483 LHSSSPAICTFLHSPAPSKSMFQFLMAQYALCSSSTGSRHDFL*TI**GDIPMG 3322 Score = 31.3 bits (62), Expect(5) = 1e-18 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIPR Sbjct: 2572 WYVLGYHVVHYVGIPR 2525 Score = 28.6 bits (56), Expect(5) = 1e-18 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI LW TN S VGQ KP C L V + +PP* Sbjct: 2877 GIASRAVIPLCLW*LVHPLTNSFESSYIVGQKKPLCQILAWVRNAP*WPP* 2725 Score = 25.8 bits (50), Expect(5) = 1e-18 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -3 / -2 Query: 665 ELGNGPI*SKPETSN 621 +LG GPI S P+TSN Sbjct: 2949 DLGKGPIKSIPQTSN 2905 Score = 56.5 bits (117), Expect(2) = 3e-07 Identities = 34/126 (26%), Positives = 60/126 (47%) Frame = -2 / -1 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVS 676 ++E ++EV T +S+ R + +WE D +HL G + I + SL P D++ + DV Sbjct: 3139 VSEGFVHEVGTSVSYDHPRGTNTWEDDFCEHLFGMLHIRDAARHSLNPFGDIVDCHQDVL 2960 Query: 675 VPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDKLTGILEESGPIE 496 +G RE S+ + +IK+ + + + H +T SD + D+ + P E Sbjct: 2959 EVVGLRERSNKVYTPNIKYLDLQIVCDGHCITSSDSSLPMVACASSDEFF*VFIHCWPEE 2780 Query: 495 T*LQYL 478 L L Sbjct: 2779 AALPNL 2762 Score = 26.3 bits (51), Expect(2) = 3e-07 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -2 / -2 Query: 282 GMYLATI*FA*SAYHG 235 GMYL T+*F AYHG Sbjct: 2571 GMYLDTM*FIMLAYHG 2524
>LOC_Os11g22130:12011.t01883:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2189 Score = 183 bits (394), Expect(3) = 1e-92 Identities = 73/142 (51%), Positives = 99/142 (69%) Frame = +1 / +1 Query: 589 MPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 MP+ ++L ++ FDV G ++MGPFP S Y ++LVAVDYV+KWVEA+P + A + +M Sbjct: 1 MPLTHNLQVELFDVWGINFMGPFPKSYHYKYILVAVDYVSKWVEAMPCRAAYAKHARQMF 180 Query: 769 K*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIK 948 +IFPRFG PR +++D GSHFI FR L + H +A+PYHPQ+SGQ E+SN++IK Sbjct: 181 HEIIFPRFGTPRMVISDGGSHFIDKTFRNFLQELGAQHNIAAPYHPQTSGQAEMSNKQIK 360 Query: 949 LILQKIVNRSRKNWSSKLDDAL 1014 ILQK VN K W +KL D L Sbjct: 361 NILQKTVNEMGKAWKNKLPDCL 426 Score = 158 bits (339), Expect(3) = 1e-92 Identities = 56/105 (53%), Positives = 80/105 (76%) Frame = +1 / +2 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDE 1197 +Y TAY+ P+GMSPY+ VYGK C+ P+E+EH+A+WAI+ N D K AG+ +S L+E Sbjct: 410 SYLTAYQTPIGMSPYQHVYGKTCHLPVEMEHRAHWAIRTWNMDLKGAGQHKKMQLSELEE 589 Query: 1198 WRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 WR + Y NAK+++++ KRWHDKRI+ +EF GD VLL+NSR++ F Sbjct: 590 WRDKTYHNAKIYQDRTKRWHDKRIKHKEFKAGDKVLLFNSRVKLF 724 Score = 40.0 bits (81), Expect(3) = 1e-92 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GPY + + GA+ + + EGN +V Sbjct: 722 FGHGKLRSKWMGPYTVVDASPHGAVTLRDNEGNIFKV 832 Score = 71.6 bits (150), Expect(3) = 2e-27 Identities = 40/123 (32%), Positives = 67/123 (54%) Frame = -2 / -3 Query: 990 PILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISH 811 P L ID LL + DL + L+T L MIR N ++ + ++E ++++ T +++ Sbjct: 402 PCLPHLIDSLLQNVLDLFVAHFCLSTCLGMIRSGNVVLSPKFLQKVSEGLIDKMRTSVTY 223 Query: 810 QISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKAR 631 R SK+WE +L KHL G + + + LYPL +++ + ++ V IG E SH + A Sbjct: 222 HHPRSSKTWEDNLMKHLAGMLGVCGPAWHCLYPLGHIVNGHQNILVVIGFWERSHEVDAP 43 Query: 630 DIK 622 IK Sbjct: 42 YIK 34 Score = 46.0 bits (94), Expect(3) = 2e-27 Identities = 22/40 (55%), Positives = 23/40 (57%) Frame = -3 / -3 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS S G+ Q P*T YGDMPMG Sbjct: 552 PAPFKSMFQVRIAQCALCSISTGRWQVFP*TCWYGDMPMG 433 Score = 45.1 bits (92), Expect(3) = 2e-27 Identities = 25/48 (52%), Positives = 28/48 (58%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL + T SP LNS IRLSCHLL S LA LHSS+ Sbjct: 723 KSFTRELNSSTLSPALNSLCLIRLSCHLLVLSW*ILAL**VLSLHSSS 580 Score = 51.0 bits (105), Expect(2) = 1e-14 Identities = 30/90 (33%), Positives = 46/90 (51%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++ EL L V+PS L LGI+I L PF+ ++ +L+G I V D Sbjct: 697 QHLVPCFELLVLDPLVMPSFGSVLVDLGIVIGLVPPFLQLRELHLLVLSGSL*IHVPSPD 518 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGIL 1036 P+ +F L R++ L ++ + *HA G L Sbjct: 517 SPMRPMFHLYRKVASLPVDMLVW*HADGRL 428 Score = 50.6 bits (104), Expect(2) = 1e-14 Identities = 38/96 (39%), Positives = 45/96 (46%) Frame = -3 / -1 Query: 971 LTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTP 792 LT+FC+ S PL G* G A L RK +K EP S+I G P Sbjct: 383 LTVFCKMFLICLLLISACPLVWG*YGAAMLC*APSSCKKFRKVLSIK*EPPSLITIRGVP 204 Query: 791 NLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATK 684 G + +I A L GIASTHL T*STAT+ Sbjct: 203 KRGKIIS*NIWRACLAYAALHGIASTHLDT*STATR 96
>LOC_Os11g25720:12011.t02188:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1559 Score = 336 bits (727), Expect = 6e-91 Identities = 131/246 (53%), Positives = 176/246 (71%) Frame = +1 / +3 Query: 595 MNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK* 774 +N++L + FDV G D+MGPFP S ++LVAVD V+KWVEA+P + AD + +M Sbjct: 804 LNFNLQV*LFDVWGIDFMGPFPKSYDCEYILVAVDDVSKWVEAMPCRTADAKHARRMFHE 983 Query: 775 VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLI 954 IFPRFG P +++D GSHFI F+ +L + H +A+PYHPQ+SGQ E SN++IK I Sbjct: 984 TIFPRFGTPYMVISDGGSHFIDKTFQNLLQELWAQHNIATPYHPQTSGQAETSNKQIKNI 1163 Query: 955 LQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 LQK VN K W +KL DALWAY TAYK P+GMSPY++VYGK C+ +ELEH+A+WAI+ Sbjct: 1164 LQKTVNEMGKAWKNKLSDALWAYRTAYKTPIGMSPYQLVYGKTCHLSVELEHRAHWAIRT 1343 Query: 1135 LNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYN 1314 N D K AG+ +S L+EWR +AY NAK++K++ KRWHDKRI+ +EF GD VLL+N Sbjct: 1344 WNMDLKGAGQHRKMQLSELEEWRDKAYHNAKIYKDRTKRWHDKRIKHKEFKAGDKVLLFN 1523 Query: 1315 SRLRFF 1332 S ++ F Sbjct: 1524 SWVKLF 1541 Score = 57.4 bits (119), Expect(3) = 2e-26 Identities = 32/72 (44%), Positives = 39/72 (54%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK +P S+I G P G + +I SA L GIASTHL T STAT+ + G Sbjct: 1045 MK*DPPSLITIYGVPKRGKIVSWNIRRACLASAVLHGIASTHLDTSSTATRIYSQS*DFG 866 Query: 656 NGPI*SKPETSN 621 GP+ S P TSN Sbjct: 865 KGPMKSMPHTSN 830 Score = 52.8 bits (109), Expect(3) = 2e-26 Identities = 29/79 (36%), Positives = 40/79 (50%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC*TNSFEIY*RSFVGSI* 944 P+ CVP +++ H+ VTC W SYKQS+ P VH+ C + +*+S V * Sbjct: 1332 PSAPCVPTLPKDDKSSHRQVGMVTCRWASYKQSYMPKVHQIACSSMPSPSH*QSSVEYS* 1153 Query: 943 SPYYSTPLDH*TEDDKEMQ 887 YS H + DD E Q Sbjct: 1152 FVCYSFLPVHLSGDDMEWQ 1096 Score = 48.7 bits (100), Expect(3) = 2e-26 Identities = 26/48 (54%), Positives = 29/48 (60%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ EL + T SP LNS IRLSCHLL SL LA A LHSS+ Sbjct: 1540 KSFTHELNSSTLSPALNSLCLIRLSCHLLVLSLYILALW*ALSLHSSS 1397 Score = 100 bits (213), Expect(2) = 2e-21 Identities = 60/184 (32%), Positives = 95/184 (51%) Frame = -2 / -1 Query: 1314 IV*QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVE 1135 + *Q ++ +E L SF++PS L LGI++ L PF ++ P+L+G ++ V Sbjct: 1523 VE*QHLVPSLEFFVLDSFIMPSFGSVLVYLGIVVGLVPPFFQLRELHLPVLSGSLQVHVP 1344 Query: 1134 LFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL* 955 D P+ VFQL R++T L I+ + *HA G L CI P L ID LL* Sbjct: 1343 SPDSPVRPVFQLYRKMTSLPIDKLVW*HADGRLISSPICPKCIR*LVLPCLPHLIDSLL* 1164 Query: 954 DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYD 775 + DL +T+ L+T L MI N ++ + + E ++E+ +++ R SK+ E Sbjct: 1163 NILDLFVTRFCLSTCLGMIWSGNIVLSPKFLQ*VLEGLIDEMRPSVTYHHIRSSKTRENS 984 Query: 774 LFKH 763 L +H Sbjct: 983 LVEH 972 Score = 24.0 bits (46), Expect(2) = 2e-21 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 / -3 Query: 721 PLPT**RNPQQLRRECTHWNSGMVPYNQSPRHQM 620 PLPT + + L +H G VP ++ P HQ+ Sbjct: 930 PLPTWTHHQRPLGYTRSHRTLGKVP*SRCPIHQI 829 Score = 76.2 bits (160), Expect = 1e-12 Identities = 51/142 (35%), Positives = 64/142 (45%) Frame = +2 / +1 Query: 887 LHLLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIK 1066 L L II V + V +S Y+R S+ R G + MH+G +GLLIR P ACH Sbjct: 1096 LPLHIIPRQVDRQKRVTNKSRIFYRRLSMRWGRHGRTSYLMHFGHIGLLIRRPSACHHTN 1275 Query: 1067 WFMVRPVISLLSWNTKLIGQSKSSTLISNLPVRSGCLISAH*MNGEPRHMRMPSCSRKRL 1246 M R VI SWNT G S T P +G S NG R MP +R Sbjct: 1276 LSMGRLVIFR*SWNTGRTGLSGLGTWT*REPDSTGRCSSLSWKNGGTRPTTMPRYTRTEP 1455 Query: 1247 RDGTTNEYKNESSM*VIMSCYT 1312 +DG NE ++S CY+ Sbjct: 1456 KDGMINESSTKNSRLGTRCCYS 1521 Score = 45.5 bits (93), Expect(2) = 4e-07 Identities = 24/56 (42%), Positives = 32/56 (57%) Frame = +3 / +2 Query: 957 TKDRQ*ISKELV*QT*RCTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 T+D Q* + + Q CT+G+ DCL*++H HVT+ LW L GTQ LG Sbjct: 1166 TEDCQ*DGEGMEEQAI*CTLGI*DCL*DAHRHVTIPTCLWEDLSSFGRVGTQGALG 1333 Score = 30.4 bits (60), Expect(2) = 4e-07 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 / +2 Query: 1197 MENPGI*ECQVVQGKG*EMARQTNTKTRVQ 1286 ME G+ +CQ +QG+ +MA TN R+Q Sbjct: 1406 MEGQGLPQCQDIQGQNQKMA**TNQAQRIQ 1495 Score = 45.5 bits (93), Expect = 0.002 Identities = 22/40 (55%), Positives = 24/40 (60%) Frame = -3 / -2 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS+S +*Q P*T YGDMPMG Sbjct: 1369 PAPFKSMFQVRIAQCALCSNSTER*QVFP*TSWYGDMPMG 1250
>LOC_Os04g17600:12004.t01510:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1293 Score = 298 bits (646), Expect(3) = 1e-88 Identities = 112/230 (48%), Positives = 157/230 (68%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG ++ RT K+ QSGF+WPT++ D ++F+ C CQ+ G IT + MP+ Y+L ++ Sbjct: 598 YGSHYGAFRTHAKIWQSGFFWPTMYGDTKEFIRRCTSCQKHGGITAQDAMPLTYNLQVEL 777 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP ++LVAVDYV+KWVEA+P + A+ + +M +IFP FG P Sbjct: 778 FDVWGIDFMGPFPKFYDCEYILVAVDYVSKWVEAMPCRAANTKHAHRMFDEIIFPCFGTP 957 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI F+ L + H + +PYHP++ GQ E N++I ILQK VN Sbjct: 958 RTVISDGGSHFIDKTFQNFLQELGAQHNIVTPYHPKTGGQAETRNKQIMNILQKTVNEMG 1137 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIK 1131 K W +KL +ALWAY T Y P+GMSPY++VYGK C+ P+ELEHKA+WAI+ Sbjct: 1138 KAWKNKLPNALWAYRTTYNMPIGMSPYQLVYGKTCHLPVELEHKAHWAIR 1287 Score = 35.9 bits (72), Expect(3) = 1e-88 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ ++ R WD P+LY+ D ++RR ++G Sbjct: 451 ENKKRLSYESRKRLWDAPYLYRVCSDSLLRRCVPADEG 564 Score = 34.1 bits (68), Expect(3) = 1e-88 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ + S PWYA N++VA ++PP Sbjct: 373 LLKVTDSDPWYAPIVNFMVAWHVPP 447 Score = 83.5 bits (176), Expect = 6e-15 Identities = 56/190 (29%), Positives = 92/190 (48%) Frame = -2 / -1 Query: 1122 PISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFD 943 P+ VFQL R++T L ++ + *HA G + CI P L +D LL + D Sbjct: 1278 PVRLVFQLYRKVTSLPVDKLVW*HADGHIISSPICPKCIG*LVLPCLPHLVDSLLQNIHD 1099 Query: 942 LPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKH 763 L + L+T L MIR N ++ L + + E ++E+ +++ S SK+ E +L +H Sbjct: 1098 LFVACFCLSTCLGMIRSDNVVLSPKLLQKVLEGLIDEMRPSVTYHRSWSSKTREDNLVEH 919 Query: 762 LNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFL 583 G + + + LYPL +++ + D+ I E SH + A IK + K + H + Sbjct: 918 SVGVLGVCGPAWHCLYPLGHIVNGHQDILAVIELWERSHEVDAPYIK*LDLKVVCQWHRI 739 Query: 582 TLSDIPYSLA 553 SD LA Sbjct: 738 LSSDPSMLLA 709 Score = 54.7 bits (113), Expect(2) = 1e-13 Identities = 32/72 (44%), Positives = 38/72 (52%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK +P S+I G P G + +I A L GIASTHL T*STAT+ G Sbjct: 992 MK*DPPSLITVRGVPKQGKIISSNIRWACLVFAALHGIASTHLDT*STATRIYSQS*NFG 813 Query: 656 NGPI*SKPETSN 621 GP+ S P TSN Sbjct: 812 KGPMKSMPHTSN 777 Score = 48.3 bits (99), Expect(2) = 1e-13 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = -3 / -2 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ ALCS+S G+*Q P*T YGDMPMG Sbjct: 1283 IAQCALCSNSTGR*QVFP*TSWYGDMPMG 1197 Score = 41.8 bits (85), Expect(2) = 0.009 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = +2 / +2 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIG 1123 +R S R G + MH+G +GLLI P ACH R V SWNT+ G Sbjct: 1115 RRLSTRWGRHGRTSYPMHFGHIGLLIICPSACHHTNLSTGRLVTFR*SWNTRRTG 1279 Score = 24.0 bits (46), Expect(2) = 0.009 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = +3 / +3 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIPE 662 ++PK H + +A ++ I*C+G L+GT P+ Sbjct: 705 KLPKAWRDHCSRCDATDIQPSSRAI*CMGHRLHGTFPK 818 Score = 35.4 bits (71), Expect = 1.8 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP ++ + VTC W YK S+ P VH C Sbjct: 1279 PSAPCVPTLPEGDKSSRRQVGMVTCRWAYYK*SYMPKVHWVAC 1151
>LOC_Os04g02180:12004.t00114:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4584 Score = 284 bits (614), Expect(4) = 2e-87 Identities = 114/219 (52%), Positives = 149/219 (68%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG ++ RT K+ QSGF+WPT+++D+ +FV C CQR G IT R MP+ Y+L + Sbjct: 2409 YGSHYGAFRTQAKIWQSGFFWPTMYEDSTEFVRRCTSCQRQGGITARDAMPLTYNLQGEI 2588 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+K VEA+P AD + KM +IFPRFG P Sbjct: 2589 FDVWGIDFMGPFPKSRNCEYILVAVDYVSK*VEAMPCSAADARHARKMFTEIIFPRFGTP 2768 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN++IK ILQ +VN+ Sbjct: 2769 RMVISDGGSHFIDKTFRDLLREMRAKHNVATPYHPQTSGQAETSNKQIKNILQNMVNKMG 2948 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPL 1098 W +L DALWAY TAYK P+GMSPY++VY A P+ Sbjct: 2949 TGWKDRLSDALWAYRTAYKTPIGMSPYQIVYETAYKTPI 3065 Score = 40.0 bits (81), Expect(4) = 2e-87 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PWYA+ NY+V+KYIPP ++ K Sbjct: 2202 SNPWYANIVNYMVSKYIPPGENQRKLK 2282 Score = 38.6 bits (78), Expect(4) = 2e-87 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+P+LY+ DG++RR +G Sbjct: 2262 ENQRKLKYENRRHIWDEPYLYRVCSDGLLRRCVPTNKG 2375 Score = 37.7 bits (76), Expect(4) = 2e-87 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +1 / +3 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI + + GN +V Sbjct: 3348 FGHGKLRSKWEGPFDVIDTSSHGAITLRDDSGNIFKV 3458 Score = 163 bits (351), Expect(4) = 5e-43 Identities = 60/104 (57%), Positives = 82/104 (78%) Frame = +1 / +3 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEW 1200 Y TAYK P+GMSPY++VYGK+C P+ELEH+AYWAI+ N DF+ AGE I+ L+EW Sbjct: 3039 YETAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNWNMDFEGAGEWRKMQIAELEEW 3218 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 R +AY NAK++KE+ KRWH+KRI+ ++F GD VL++NSR++ F Sbjct: 3219 REKAYHNAKIYKERTKRWHEKRIKIKKFKPGDKVLMFNSRVKLF 3350 Score = 34.5 bits (69), Expect(4) = 5e-43 Identities = 21/59 (35%), Positives = 32/59 (54%) Frame = +3 / +2 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGT 653 Q +A FLLAH+++ + + ++P+ R H + NA + * I CLG LYGT Sbjct: 2444 QDLAKWFLLAHNVRRLNRIRQKMHKLPEARRNHCS*CNAPHIQFAR*DIRCLGYRLYGT 2620 Score = 26.7 bits (52), Expect(4) = 5e-43 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 / +2 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P * RF+LH Sbjct: 2741 NHLPKIWYPQNGHK*RRFSLH 2803 Score = 25.4 bits (49), Expect(4) = 5e-43 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 / +2 Query: 238 VVCRLCKLYRSQIHTTQ 288 VVC+ KL+ QIHTT+ Sbjct: 2210 VVCQHSKLHGIQIHTTR 2260 Score = 93.2 bits (197), Expect(3) = 3e-36 Identities = 58/118 (49%), Positives = 67/118 (56%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLTIFCR S *PL G *G ATL L RK MK EP S++ LG Sbjct: 2941 LLTIFCRIFLICLFDVSA*PLVCGW*GVATLCLALISRRRSRKVLSMK*EPPSLMTILGV 2762 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIAST+L T*STAT+ +LG GPI S P+TSN Sbjct: 2761 PNLGKMISVNIFLACLASAALHGIASTYLET*STATRMYSQLRDLGKGPIKSIPQTSN 2588 Score = 69.3 bits (145), Expect(3) = 3e-36 Identities = 44/97 (45%), Positives = 49/97 (50%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I SC SL A A+ LHSS+ I SPA Sbjct: 3349 KSLTLELNISTLSPGLNFLILILFSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 3170 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 3169 SKSIFQFLMAQYALCSSSTGSRHDFP*TI*YGDIPMG 3059 Score = 29.9 bits (59), Expect(3) = 3e-36 Identities = 18/39 (46%), Positives = 19/39 (48%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTL 477 GI+ R VI P LW TN S VGQ KP C L Sbjct: 2560 GIASRAVIPPCLWQLVHLLTNSVESSYIVGQKKPLCQIL 2444 Score = 86.3 bits (182), Expect(2) = 2e-18 Identities = 58/199 (29%), Positives = 94/199 (47%) Frame = -2 / -2 Query: 1074 INHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIR 895 +N+ I H++G L C+ + P S +D +L + DL + LTT L M+R Sbjct: 3041 VNYLIWGHSNGCLVRCPVCPQCVRQSILPSCSHFVDHILQNILDLFV*CFCLTTGLWMVR 2862 Query: 894 RCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLY 715 + + LS ++E +NEV T +++ S +KSWE D +HL G IS + SL Sbjct: 2861 SGHIVFGSHLS*EVSEGFVNEVRTSVTYDHSGGTKSWEDDFCEHLPGMPRISGAARHSLN 2682 Query: 714 PLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQD 535 L D++ + +V R+ SH + +I++ + + H +T SD LA D Sbjct: 2681 LLGDIVDCHQNVLAVARLRKRSHKVYTPNIEYLTLQIVCEGHCITSSDSSLPLAACASSD 2502 Query: 534 KLTGILEESGPIET*LQYL 478 + + GP ET L L Sbjct: 2501 EFC*VFVHCGPEETTLPNL 2445 Score = 34.5 bits (69), Expect(2) = 2e-18 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 / -2 Query: 283 WYVFGYDIVCIIGIPR 236 WYVFGY +V +GIPR Sbjct: 2255 WYVFGYHVVYYVGIPR 2208
>LOC_Os06g19350:12006.t01756:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5509 Score = 236 bits (509), Expect(6) = 3e-87 Identities = 90/162 (55%), Positives = 118/162 (72%) Frame = +1 / +1 Query: 847 FRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYG 1026 FR +L + H VA+PYHPQ+SGQ E SN++IK ILQK VN+ W +L DALWAY Sbjct: 3619 FRDLLREMGAKHNVATPYHPQTSGQAETSNKQIKNILQKTVNKMGTGWKDRLPDALWAYW 3798 Query: 1027 TAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRT 1206 TAYK P+GM PY++VYGK C P+ELEH+AYWAI+ N DF+ AGE I+ L+EWR Sbjct: 3799 TAYKTPIGMYPYQIVYGKPCRLPIELEHRAYWAIRNWNMDFEGAGEWRKMQIAELEEWRE 3978 Query: 1207 QAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 +AY NAK++KE+ KRWHDKRI+ ++F D VL++ SR++ F Sbjct: 3979 KAYHNAKIYKERTKRWHDKRIKIKKFKPRDKVLMFKSRVKLF 4104 Score = 49.6 bits (102), Expect(6) = 3e-87 Identities = 16/48 (33%), Positives = 31/48 (64%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQKCHSKP 442 + ++K ++ R WD+P+LY+ DG++RR E +I+++CH+ P Sbjct: 3071 ENQRKLKYESRRDIWDEPYLYRVCSDGLLRRCVPTEGLKIIERCHASP 3214 Score = 43.2 bits (88), Expect(6) = 3e-87 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPPSFTYQQKK 310 ++ S S PWYA+ NYIV+KYIPP ++ K Sbjct: 2993 LMTVSDSNPWYANIVNYIVSKYIPPGENQRKLK 3091 Score = 40.5 bits (82), Expect(6) = 3e-87 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + + GAI ++N GN +V Sbjct: 4102 FGHGKLRSKWEGPFDVIDTSSHGAITLHNESGNIFKV 4212 Score = 25.4 bits (49), Expect(6) = 3e-87 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +3 / +1 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 ++P+ R H + NA + I CLG L+GT P Sbjct: 3322 QLPEARRNHCSRCNAPHIQFASRDIRCLGYRLHGTFP 3432 Score = 23.5 bits (45), Expect(6) = 3e-87 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +3 / +1 Query: 762 DA*ISHIPKIWSP*IFDD**RFTLHSWCF 848 D I+H+P IW P * RF H F Sbjct: 3535 DVHINHLP*IWYPQNGHK*RRFLFHDKTF 3621 Score = 186 bits (401), Expect = 5e-46 Identities = 73/146 (50%), Positives = 100/146 (68%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+R+FV C CQR G IT R MP+ Y+L ++ Sbjct: 3215 YGGHYGAFRTQAKIWQSGFFWPTMYEDSREFVRRCTSCQRQGGITARDAMPLTYNLQVEI 3394 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S G ++LVAVDYV+KWVEA+P AD + KM *+IFPRFG P Sbjct: 3395 FDVWGIDFMGPFPKSRGCEYILVAVDYVSKWVEAMPCSAADVRHAKKMFT*IIFPRFGTP 3574 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVN 879 R +++D GS+F+ K++ N Sbjct: 3575 RMVISDGGSYFMTKPSETSYEKWEPN 3652 Score = 83.1 bits (175), Expect(4) = 6e-40 Identities = 40/72 (55%), Positives = 49/72 (68%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK EP S++ LG PNLG M Y++I + SA L GIASTHL T*STAT+ P +LG Sbjct: 3609 MK*EPPSLMTILGVPNLGKMIYVNIFLACLTSAALHGIASTHLET*STATRMYSQPRDLG 3430 Query: 656 NGPI*SKPETSN 621 GP+ S P+TSN Sbjct: 3429 KGPMKSIPQTSN 3394 Score = 71.6 bits (150), Expect(4) = 6e-40 Identities = 44/146 (30%), Positives = 73/146 (50%) Frame = -2 / -2 Query: 1332 KESQTRIV*QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGK 1153 +E R Q ++++E LYSFV+P+L F L +++ L SPF+ +D+ + Sbjct: 4104 EELNPRFEHQYFVSWLEFLDLYSFVMPALRPFFVYLCVVVSLFSPFLKFSDLHFSPFSCS 3925 Query: 1152 FEIKVELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRS 973 +I V + + P+ V + RE T L +N+ I H++G L C+ P S Sbjct: 3924 LKIHVPIPNGPVCSVLKFYRESTWLPVNYLIWVHSNGCLVCCPVCPQCVR*SILPSCSHF 3745 Query: 972 IDDLL*DQFDLPITQLHLTTRLRMIR 895 +D LL + DL + L+T L M+R Sbjct: 3744 VDRLLQNILDLFV*CFCLSTGLWMVR 3667 Score = 34.1 bits (68), Expect(4) = 6e-40 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + +PP* Sbjct: 3366 GIASRAVIPPCLWQLVHLLTNSLESSYIVGQKKPLCQILAWVRNAP*WPP* 3214 Score = 33.6 bits (67), Expect(4) = 6e-40 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -3 / -3 Query: 1436 TLGKFPSVLLILMAPERYTSSIT*GPSHLERSLP 1335 TL FP L ++AP S + GPSHL RS P Sbjct: 4211 TLNMFPDSLWSVIAPCEEVSMTSNGPSHLLRSFP 4110 Score = 60.6 bits (126), Expect(2) = 7e-10 Identities = 42/97 (43%), Positives = 48/97 (49%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L +L T S LN I LSC SL A A+ LHSS+ I SPA Sbjct: 4103 KSLTLDLNISTLSLGLNFLIFILLSCQRFVLSLYIFALW*AFSLHSSSSAICIFLHSPAP 3924 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YG +PMG Sbjct: 3923 SKSMFQFLMAQYALCSSSIGSRHGFP*TI*YGYIPMG 3813 Score = 24.4 bits (47), Expect(2) = 7e-10 Identities = 16/33 (48%), Positives = 17/33 (51%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWL 876 LLT+FCR S PL G *G ATL L Sbjct: 3746 LLTVFCRIFLICLFDVSACPLVCGW*GVATLCL 3648
>LOC_Os06g28460:12006.t02550:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6879 Score = 142 bits (304), Expect(4) = 4e-81 Identities = 56/120 (46%), Positives = 79/120 (65%) Frame = +1 / +1 Query: 589 MPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 MP+ Y+L ++ FDV G D+MGPFP S ++LVAV+YV+KWVEA+P AD + KM Sbjct: 1 MPLTYNLQVEIFDVWGIDFMGPFPKSRNCEYILVAVNYVSKWVEAMPCSAADAKHAKKMF 180 Query: 769 K*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIK 948 +IFPRFG PR +++D GS F+ FR +L H VA+PYHP +SGQ + +++ Sbjct: 181 TEIIFPRFGTPRMVISDGGSLFVDKTFRDLL*DMGAKHNVATPYHPYTSGQAKRQTNKLR 360 Score = 106 bits (226), Expect(4) = 4e-81 Identities = 39/85 (45%), Positives = 62/85 (72%) Frame = +1 / +2 Query: 1078 KACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWH 1257 K+C P+EL H+AY AI+ N DF+ G+ ++ L+EWR +AY N++++KE++KRW Sbjct: 488 KSCRLPVELGHRAYKAIRN*NMDFEGVGDWRKMQLAELEEWREKAYHNSRIYKERMKRWP 667 Query: 1258 DKRIQKREFNVGDYVLLYNSRLRFF 1332 DKRI+ ++F GD VL++NSR++ F Sbjct: 668 DKRIKIKKFKPGDKVLMFNSRVKLF 742 Score = 79.9 bits (168), Expect(4) = 4e-81 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = +1 / +3 Query: 931 SNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYG 1077 SN++IK ILQ VN+ W KL DALWAY TAYK P+GMSPY++VYG Sbjct: 342 SNKQIKNILQNTVNKMGIGWKDKLPDALWAYPTAYKTPIGMSPYQIVYG 488 Score = 33.1 bits (66), Expect(4) = 4e-81 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G++ S WEGP+ I + GAI + + GN +V Sbjct: 740 FGHGKVRSNWEGPFDIIDTSSHGAITLCDDSGNIFKV 850 Score = 82.6 bits (174), Expect(3) = 2e-23 Identities = 50/100 (50%), Positives = 58/100 (58%) Frame = -3 / -2 Query: 920 *PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*S 741 *PL G *G ATL L RK K EP S++ LG PNLG M ++I + + S Sbjct: 332 *PLVYGW*GVATLCLAPMSHRRSRKVLSTKSEPPSLMTILGVPNLGKMISVNIFLACFAS 153 Query: 740 AFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 A L GIASTHL T* TAT+ +LGNGPI S P TSN Sbjct: 152 AALHGIASTHLET*LTATRIYSQLRDLGNGPIKSIPHTSN 33 Score = 43.2 bits (88), Expect(3) = 2e-23 Identities = 21/71 (29%), Positives = 40/71 (56%) Frame = -2 / -3 Query: 1302 DIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDC 1123 D+++++E LYSF+ P+L+ F ++IC SPF * + + P ++ +I + + D Sbjct: 712 DLVSWLEFLDLYSFIRPALHPFFVYPRVVICFFSPFF*LSQLHFPPISYSLKIHILVSDG 533 Query: 1122 PISFVFQLKRE 1090 + V + RE Sbjct: 532 LVCSVPKFYRE 500 Score = 23.1 bits (44), Expect(3) = 2e-23 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -3 / -3 Query: 1079 LP*TILYGDMPMG 1041 LP*TI GD+PMG Sbjct: 490 LP*TI**GDIPMG 452 Score = 45.1 bits (92), Expect = 0.002 Identities = 26/103 (25%), Positives = 52/103 (50%) Frame = -2 / -1 Query: 921 LTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVI 742 LT + M+R N + +S+ ++E+ ++E I++ +K E D +HL G + I Sbjct: 333 LTAGIWMVRCSNVVFGSHVSQEVSESFVDEERASITYDHPWGTKPREDDFCEHLLGMLRI 154 Query: 741 SIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFN 613 + SL PL D++ + ++ G +WSH + I++ + Sbjct: 153 RGAARHSLNPLGDIVDCHQNILAITGLGKWSHKVNTPHIEYLD 25
>LOC_Os05g20880:12005.t01849:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1518 Score = 225 bits (485), Expect(3) = 4e-81 Identities = 89/169 (52%), Positives = 117/169 (69%) Frame = +1 / +1 Query: 601 YSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VI 780 Y+ ++ FDV G D+MGPF S ++LVAVDYV+KWVEA+P AD + KM +I Sbjct: 4 YAKNVEIFDVWGMDFMGPFHKSRNCEYILVAVDYVSKWVEAMPCNTADARHAKKMFTEII 183 Query: 781 FPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQ 960 F RFG+PR +++D GSHFI F+ +L + H VA+PYHPQ+SGQ E SN+ IK IL Sbjct: 184 FTRFGIPRMVISDGGSHFIDKTFQDLLREMGAKHNVATPYHPQTSGQAETSNKRIKNIL* 363 Query: 961 KIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELE 1107 K VN+ W KL DALWAY TAY+ P+GMSPY+++Y K+C P+ELE Sbjct: 364 KTVNKMETGWKDKLSDALWAYRTAYETPIGMSPYQIIYRKSCRLPVELE 510 Score = 79.0 bits (166), Expect(3) = 4e-81 Identities = 31/64 (48%), Positives = 45/64 (70%) Frame = +1 / +2 Query: 1141 FDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSR 1320 +DF AGE I+ L+EWR +AY NAK++KE+ K HDKRI+ ++F GD VL++NS Sbjct: 542 WDFDGAGEWRKMQITELEEWREKAYHNAKIYKERTKH*HDKRIKIKKFKPGDKVLMFNSE 721 Query: 1321 LRFF 1332 ++ F Sbjct: 722 VKLF 733 Score = 39.1 bits (79), Expect(3) = 4e-81 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +1 / +2 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ + GAI + N GN +V Sbjct: 731 FGHGKLRSKWEGPFNVINTSSHGAITLRNDSGNIFKV 841 Score = 68.0 bits (142), Expect(3) = 2e-16 Identities = 37/72 (51%), Positives = 45/72 (62%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK EP S++ LG PNL M ++I + SA L GIASTHL T*STAT+ +L Sbjct: 239 MK*EPPSLMTILGIPNLVKMISVNIFLACLASAVLHGIASTHLET*STATRMYSQLRDLW 60 Query: 656 NGPI*SKPETSN 621 GPI S P+TSN Sbjct: 59 KGPIKSIPQTSN 24 Score = 37.7 bits (76), Expect(3) = 2e-16 Identities = 25/59 (42%), Positives = 29/59 (49%) Frame = -3 / -1 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPA 1155 K+L EL T SP LN I LSC SL A A+ LHSS+ +I SPA Sbjct: 732 KSLTSELNISTLSPGLNFLIFILLSCQCFVLSLYIFALW*AFSLHSSSSVICIFLHSPA 556 Score = 28.1 bits (55), Expect(3) = 2e-16 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -3 / -2 Query: 1109 CSSSRGK*QALP*TILYGDMPMG 1041 CSSS G * I YGD+PMG Sbjct: 512 CSSSTGSRHDFL*II*YGDIPMG 444 Score = 56.5 bits (117), Expect = 8e-07 Identities = 34/103 (33%), Positives = 56/103 (54%) Frame = -2 / -1 Query: 921 LTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVI 742 LTT LRM+R + + LS + E +NEV T +++ S D+KS + D +HL G I Sbjct: 324 LTTGLRMVRSGHIVFGSHLS*EVLEGFVNEVRTSVTYDHSGDTKSCKDDFCEHLLGMPRI 145 Query: 741 SIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFN 613 S + SL PL D+++ + +V E SH + +I++ + Sbjct: 144 SGVAWHSLNPLGDIVNCHQNVLAVARLMERSHKVHTPNIEYLD 16
>LOC_Os01g32030:12001.t02783:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2023 Score = 261 bits (564), Expect(3) = 3e-79 Identities = 101/184 (54%), Positives = 134/184 (72%) Frame = +1 / +1 Query: 796 VPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNR 975 VP+ +++D GSHFI FR +L + H VA+PY Q+SGQ E SN++IK ILQK VN+ Sbjct: 94 VPKMVISDGGSHFIEKTFRDLLREMGAKHNVATPYRRQTSGQAETSNKQIKNILQKTVNK 273 Query: 976 SRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKL 1155 W +L DALWAY TAYK P+GMSPY++VYGK+C P+ELEH+AYWAI+ N DF+ Sbjct: 274 MGTGWKDRLPDALWAYRTAYKTPIGMSPYQIVYGKSCRLPVELEHRAYWAIRNWNMDFEG 453 Query: 1156 AGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFFA 1335 AGE I+ L+EWR +AY NAK++KE+ KRWHDKRI+ ++F GD VL++NSR++ F Sbjct: 454 AGEWRKMQIAELEEWREKAYHNAKIYKERTKRWHDKRIKIKKFKPGDKVLMFNSRVKLFG 633 Query: 1336 GRLL 1347 R L Sbjct: 634 HRKL 645 Score = 41.8 bits (85), Expect(3) = 3e-79 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +1 / +3 Query: 703 VTKWVEAIPTKNADHHTSIKMLK*VIFPRFG 795 V+KWVEA+P AD + KM +IFPRFG Sbjct: 3 VSKWVEAMPCSAADARHAKKMFTEIIFPRFG 95 Score = 34.1 bits (68), Expect(3) = 3e-79 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ + + GAI + + GN +V Sbjct: 640 KLRSKWEGPFDVIDTSLHGAITLRDDSGNIFKV 738 Score = 70.3 bits (147), Expect(3) = 4e-21 Identities = 45/97 (46%), Positives = 50/97 (51%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 K+L EL T SP LN I LSC SL A A+ LHSS+ I SPA Sbjct: 629 KSLTLELNISTLSPGLNFLIFILLSCQRFVLSLYIFAL**AFSLHSSSSAICIFLHSPAP 450 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P*TI YGD+PMG Sbjct: 449 SKSMFQFLMAQYALCSSSTGSRHDFP*TI*YGDIPMG 339 Score = 35.4 bits (71), Expect(3) = 4e-21 Identities = 26/60 (43%), Positives = 29/60 (48%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL *G ATL L RK MK EP S++ LGT Sbjct: 272 LLTVFCRIFLICLFDVSA*PLVCRR*GVATLCLAPISRRRSRKVFSMK*EPPSLMTILGT 93 Score = 35.0 bits (70), Expect(3) = 4e-21 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -3 / -1 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT 702 PNLG M ++I + SA L GIASTHL T Sbjct: 94 PNLGKMISVNIFLACLASAALHGIASTHLET 2 Score = 65.7 bits (137), Expect(2) = 6e-11 Identities = 43/162 (26%), Positives = 78/162 (48%) Frame = -2 / -2 Query: 1296 ITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPI 1117 +++++ Y FV+P+L F L ++I L SPF +D+ + ++ V + D P+ Sbjct: 594 VSWLKFLDFYPFVMPALRPFFVYLCVVISLLSPFFKFSDLHFSPFSCSLKVHVPVSDGPV 415 Query: 1116 SFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLP 937 V + T L +++ I H++G L C+ + P S +D LL + DL Sbjct: 414 CSVLKFHG*ST*LPVDYLIWGHSNGCLVGCPVCPQCVRQSILPSCSHFVDRLLQNILDLF 235 Query: 936 ITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISH 811 + LTT L +R + + LS ++E NEV T +++ Sbjct: 234 V*CFCLTTGLSTVRSGHIVFGSHLS*EVSEGFFNEVRTSVTY 109 Score = 23.1 bits (44), Expect(2) = 6e-11 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -2 / -3 Query: 795 SKSWEYDLFKHLNGGVVISIFSGDSLYPLSD 703 +K WE D +HL G I + SL P D Sbjct: 95 TKPWEDDFCEHLLGMPRIRGAARHSLNPFGD 3
>LOC_Os01g31390:12001.t02723:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 690 Score = 293 bits (635), Expect = 3e-78 Identities = 120/229 (52%), Positives = 157/229 (68%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV CQR G IT R MP+ Y+L ++ FDVSG D+MGPFP S ++LV Sbjct: 1 MYEDSKEFVRRFASCQRQGGITARSAMPLTYNLQVEIFDVSGIDFMGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+KWVEA+ D + KM +IFPRFG PR +++D GSHFI FR +L + Sbjct: 181 AVDYVSKWVEAMSCSAVDAKHAKKMFIEIIFPRFGTPRMVISDGGSHFIDKTFRNLLREK 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMG 1050 H VA+PYHPQ+SGQ E SN+ IK IL K VN+ W +L D LWAY TAYK P+G Sbjct: 361 GAKHNVATPYHPQTSGQAETSNK*IKNIL*KTVNKMGT*WKDRLLDVLWAYRTAYKPPIG 540 Query: 1051 MSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDE 1197 MSPY++VYGK+C P+ELEH+AYWAI+ N DF+ AGE I+ L+E Sbjct: 541 MSPYQIVYGKSCRLPVELEHRAYWAIRNWNMDFEGAGEWRKMQIAELEE 687 Score = 91.8 bits (194), Expect(2) = 1e-24 Identities = 56/118 (47%), Positives = 66/118 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+F R S *PL G *G ATL L + RK MK EP S++ LG Sbjct: 464 LLTVFYRIFLIYLFDVSA*PLVCGW*GVATLCLAPFSRRRFRKVLSMK*EPPSLMTILGV 285 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + + S L IASTHL T*STAT+ +LG GPI S PETSN Sbjct: 284 PNLGKMISMNIFLACFASTALHDIASTHLET*STATRMYSQLRDLGKGPIKSIPETSN 111 Score = 43.7 bits (89), Expect(2) = 1e-24 Identities = 26/53 (49%), Positives = 29/53 (54%) Frame = -3 / -2 Query: 1199 HSSNELISNNHFSPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 HSS+ I SPA L+AQ ALCSSS G P*TI GD+PMG Sbjct: 689 HSSSSAICIFLHSPAPSKSMFQFLMAQYALCSSSTGSRHDFP*TI**GDIPMG 531 Score = 87.7 bits (185), Expect = 3e-16 Identities = 52/153 (33%), Positives = 80/153 (52%) Frame = -2 / -1 Query: 990 PILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISH 811 P S +D LL*+ DL + LT L M+R + + +LS ++E +NEV T +++ Sbjct: 480 PSCSHFVDRLL*NILDLFV*CFCLTAGLWMVRSGHIVFGSLLS*EISEGFVNEVRTSVTY 301 Query: 810 QISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKAR 631 R SKSWE D ++HL G + I + SL PL D++ + +V RE SH + R Sbjct: 300 DHPRGSKSWEDDFYEHLLGMLRIHGAARHSLNPLGDIVDCHQNVLAVARLRERSHKVYTR 121 Query: 630 DIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDK 532 +I++ + + + RH T SD LA DK Sbjct: 120 NIEYLDLQIVCERHCTTSSDSSLPLATCESSDK 22 Score = 30.4 bits (60), Expect(2) = 0.041 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW+P* * RF+LH Sbjct: 264 NHLPKIWNP*DGHK*RRFSLH 326 Score = 28.1 bits (55), Expect(2) = 0.041 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +3 / +3 Query: 531 VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 +C + ++P+ R H + NA + I C G LYGT P Sbjct: 21 ICQKIRKLPEARRNHCS*CNASHIQFASRDIRCFGYRLYGTFP 149
>LOC_Os04g17630:12004.t01513:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2100 Score = 235 bits (508), Expect(4) = 1e-77 Identities = 90/192 (46%), Positives = 127/192 (66%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 Y G++ RT K+ QS F+WPT+++D++ F+ C C R G IT R MP+ Y+L ++ Sbjct: 1438 YRGHYGAFRTQAKIWQSRFFWPTMYEDSKGFIRHCQSC*RQGGITARDAMPLKYNLQVEI 1617 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+ GPFP S ++LV VDYV+KWVEA+ + AD + +M +IFPRF P Sbjct: 1618 FDVCGIDFTGPFPKSQKCEYILVVVDYVSKWVEAMTCRAADAKHAKRMFTEIIFPRFSTP 1797 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 +++D GSHFI FR++L K + H +A+PYHPQ++GQ E+SN++IK ILQK V+ Sbjct: 1798 MMIISDGGSHFIDRTFRELLRKMNAKHNIATPYHPQTNGQAEMSNKQIKNILQKTVHEMG 1977 Query: 982 KNWSSKLDDALW 1017 W KL DALW Sbjct: 1978 TGWKDKLPDALW 2013 Score = 41.4 bits (84), Expect(4) = 1e-77 Identities = 14/23 (60%), Positives = 19/23 (82%) Frame = +1 / +2 Query: 1036 KNPMGMSPYKMVYGKACYFPLEL 1104 +N +GMSPY++VYGK C P+EL Sbjct: 2030 QNTIGMSPYQIVYGKTCRLPVEL 2098 Score = 36.3 bits (73), Expect(4) = 1e-77 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +2 / +1 Query: 227 HSAPWYADYANYIVAKYIP 283 +S PWYA+ NY+V+KY+P Sbjct: 1228 NSDPWYANIVNYMVSKYVP 1284 Score = 36.3 bits (73), Expect(4) = 1e-77 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ + WD+P+LY+ +G++RR E+G Sbjct: 1291 ENQRKLKYESHCHIWDEPYLYRVCSNGLLRRCVPKEEG 1404 Score = 80.3 bits (169), Expect(2) = 2e-17 Identities = 51/115 (44%), Positives = 62/115 (53%) Frame = -3 / -2 Query: 968 TIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPN 789 T+FCR S PL *G *G A L L L RK +KC+P S+I +G N Sbjct: 1964 TVFCRMFLICLFDISAWPLV*GW*GVAMLCLAFILRRSSRKVLSIKCDPPSLIIIIGVLN 1785 Query: 788 LGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETS 624 GNM ++IL SA L IASTHL T*ST T+ + +LG GP+ S P TS Sbjct: 1784 RGNMISVNILFACLASAALHVIASTHLDT*STTTRIYSHF*DLGKGPVKSIPHTS 1620 Score = 30.9 bits (61), Expect(2) = 2e-17 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -3 / -1 Query: 1106 SSSRGK*QALP*TILYGDMPMGF 1038 SSS G+ P*TI YGD+P+ F Sbjct: 2100 SSSTGRRHVFP*TIWYGDIPIVF 2032
>LOC_Os06g24380:12006.t02249:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3391 Score = 278 bits (602), Expect(2) = 7e-77 Identities = 108/208 (51%), Positives = 143/208 (68%) Frame = +1 / +1 Query: 724 IPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYH 903 +P D + + KM +IFPRFG PR +++D GSHFI FR +L H VA PYH Sbjct: 1 MPCSATDANHAKKMFIEIIFPRFGTPRMVISDGGSHFIDKTFRDLLRDMGAKHNVAIPYH 180 Query: 904 PQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKA 1083 PQ+S Q E SN++I ILQK VN+ W KL DALWAY T YK P+GMSPY++VYGK+ Sbjct: 181 PQTSSQAETSNKQIMNILQKTVNKMGTGWKEKLSDALWAYRTTYKTPIGMSPYQIVYGKS 360 Query: 1084 CYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDK 1263 C P+ELEH+AYWAI+ N DF+ GE ++ L+EWR +AY N+K++KE+ KRWHDK Sbjct: 361 CRLPVELEHRAYWAIRNWNMDFEGVGEWRKMQLAELEEWREKAYHNSKIYKERTKRWHDK 540 Query: 1264 RIQKREFNVGDYVLLYNSRLRFFAGRLL 1347 RI+ ++F GD VL++NSR++ F R L Sbjct: 541 RIKNKKFKPGDKVLMFNSRVKLFGHRKL 624 Score = 31.3 bits (62), Expect(2) = 7e-77 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ + + AI + + GN +V Sbjct: 619 KLQSKWEGPFDVIDTSSHEAITLRDDSGNIIKV 717 Score = 69.3 bits (145), Expect(2) = 6e-21 Identities = 45/96 (46%), Positives = 50/96 (52%) Frame = -3 / -3 Query: 1328 NLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAXX 1149 +L EL T SP LN F IRLSC SL L YA+ LHSS+ SP Sbjct: 605 SLTLELNISTLSPGLNFLFFIRLSCQRFVRSLYILEL*YAFSLHSSSSANCIFLHSPTPS 426 Query: 1148 XXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ*ALCSSS G P*TI GD+PMG Sbjct: 425 KSMFQFLMAQ*ALCSSSTGSRHDFP*TI**GDIPMG 318 Score = 53.3 bits (110), Expect(2) = 6e-21 Identities = 34/83 (40%), Positives = 42/83 (50%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S * L G *G ATL L RK MKC+P S++ LG Sbjct: 251 LLTVFCRMFMICLFDVSA*LLVCGW*GIATLCLAPMSRRRSRKVLSMKCDPPSLMTILGV 72 Query: 794 PNLGNMTYLSILMEVW*SAFLVG 726 PNLG M ++I + + S L G Sbjct: 71 PNLGKMISMNIFLA*FASVALHG 3 Score = 99.1 bits (210), Expect = 1e-19 Identities = 54/182 (29%), Positives = 94/182 (51%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q +++++E LYSF++P+L LG++IC SPF * + + P + +I V + D Sbjct: 582 QYLVSWLEFLVLYSFIMPALCPLFVYLGVVICFFSPFF*FS*LHFPPFSYSLKIHVPISD 403 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ V + E L ++ I H++G L C+ +F P S +D LL + Sbjct: 402 GPVGSVLKFYGESA*LPVDDLIGRHSNGCLVCCPVCPQCVRQFLLPSRSHFVDRLLQNVH 223 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + LT L M+R N + +S ++E ++EV*+ +++ +K WE D ++ Sbjct: 222 DLFVRCFCLTAGLWMVRYSNIVFGSHVS*EVSEGFVDEV*SSVTYDHPWGTKPWEDDFYE 43 Query: 765 HL 760 HL Sbjct: 42 HL 37
>LOC_Os06g33770:12006.t03074:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 891 Score = 254 bits (549), Expect(3) = 3e-76 Identities = 103/207 (49%), Positives = 137/207 (66%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ SGF+WP+++ D ++FV C Q+ G IT R MP+ ++L ++ Sbjct: 268 YGGHYGAFRTYAKIW*SGFFWPSIYDDTKEFVRRCTR*QKHGGITDRDAMPLTHNLQVEL 447 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV D+MGPFP S ++LVAVDYV+KWVEA+P + AD + +M +IFPRFG Sbjct: 448 FDVWSIDFMGPFPKSYDCEYILVAVDYVSKWVEAMPCRAADAKHARQMFHEIIFPRFGTL 627 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 +++D GSHFI+ FR L K H +A+ YHPQ+S QVE SNR+IK ILQK VN Sbjct: 628 GMVISDGGSHFINKTFRNFLQKLGAQHNIATLYHPQTSRQVETSNRQIKNILQKTVNEMG 807 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPY 1062 K W +L DALW Y TAY P+GMSPY Sbjct: 808 KAWKKRLPDALWEYRTAYNTPIGMSPY 888 Score = 41.4 bits (84), Expect(3) = 3e-76 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ ++ R + WD P+LY+ DG++RR ++G Sbjct: 121 ENKKRLIYESRRHLWDAPYLYRVCSDGLLRRCVPVDEG 234 Score = 31.3 bits (62), Expect(3) = 3e-76 Identities = 8/25 (32%), Positives = 17/25 (68%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ + PWYA N+I+ +++PP Sbjct: 43 LLKVTDFDPWYAAIVNFILVRHVPP 117 Score = 68.9 bits (144), Expect(2) = 1e-11 Identities = 45/162 (27%), Positives = 80/162 (49%) Frame = -2 / -1 Query: 1056 *HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMV 877 *HA G + CI P L ID LL + DL + + +L+T L MI N ++ Sbjct: 882 *HADGCVISSPIFPKCIR*PFLPCLPHLIDSLLQNILDLSVARFYLSTCLGMI*SGNIVL 703 Query: 876 DIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVI 697 + ++E ++E+ +++ + SK+ E +L +HL G + + + LYPL ++ Sbjct: 702 SPKFLQKVSEGLIDEMGPSVTYHHPQSSKTREDNLMEHLTGVLGVCGPAWHCLYPLGHIV 523 Query: 696 HSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSD 571 + + ++ IG E SH + A IK + K + H + +SD Sbjct: 522 NGHQNILAVIGLWERSHEVDAPYIKKLDLKVVCQWHRIPISD 397 Score = 22.1 bits (42), Expect(2) = 1e-11 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -3 / -2 Query: 1061 YGDMPMG 1041 YGDMPMG Sbjct: 887 YGDMPMG 867 Score = 48.3 bits (99), Expect(2) = 1e-06 Identities = 32/76 (42%), Positives = 39/76 (51%) Frame = -3 / -2 Query: 851 RKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VY 672 RK MK +P S+I P G + +I SA L GIASTHL T*STAT+ Sbjct: 677 RKVLLMKWDPPSLITIPRVPKRGKIISWNI*RACLASAALHGIASTHLDT*STATRIYSQ 498 Query: 671 PLELGNGPI*SKPETS 624 + G GP+ S TS Sbjct: 497 S*DFGKGPMKSMLHTS 450 Score = 30.4 bits (60), Expect(2) = 1e-06 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 / -3 Query: 1057 VTCPWDSYKQSHKPIVHR 1004 VTC W YKQS+ P VH+ Sbjct: 883 VTCRWVCYKQSYIPKVHQ 830 Score = 33.6 bits (67), Expect(2) = 2.5 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 / +3 Query: 1008 CTMGLWDCL*ESHGHVTV 1061 CT+G+ DCL* +H HVT+ Sbjct: 834 CTLGI*DCL*HTHRHVTI 887 Score = 23.1 bits (44), Expect(2) = 2.5 Identities = 21/75 (28%), Positives = 27/75 (36%) Frame = +2 / +2 Query: 572 SLSVRKCL*TIHLSLNHLMSRALIIWDHSRVPMGXXXXXXXXXXXXXG*RLSPLKMLITT 751 SL +C * + LM A WD S+ PM G*R + Sbjct: 398 SLIGMRCH*HTTFKSSFLMYGASTSWDLSQSPMTASIFWWPLTMCPSG*RQCHAGPQTPS 577 Query: 752 PPLRCLNKSYSQDLE 796 P+RC + S LE Sbjct: 578 TPVRCSMRLSSLVLE 622 Score = 33.1 bits (66), Expect = 8.8 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 / +2 Query: 959 KRSSIDLERIGLANLTMHYGLMGLLIRIPWACH 1057 +R S+ R G MH+G +GLLI P ACH Sbjct: 785 RRLSMRWGRHGRKGYLMHFGNIGLLITHPSACH 883
>LOC_Os02g24900:12002.t02187:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 649 Score = 197 bits (424), Expect(2) = 6e-74 Identities = 75/137 (54%), Positives = 98/137 (71%) Frame = +1 / +2 Query: 754 SIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELS 933 +++M +IFPRFG+PR +++D GSHFI FR +L + H VA+PYHPQ+ GQ E+ Sbjct: 224 ALRMFTKIIFPRFGIPRMVISDGGSHFIDKTFRHLLREMGAKHNVATPYHPQTCGQAEIL 403 Query: 934 NREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHK 1113 N++IK ILQK VN+ W +L DALWAY TAYK P+GM Y +VYGK+C P+ELEH+ Sbjct: 404 NKQIKNILQKTVNKMATRWKDRLPDALWAYRTAYKTPIGMFRYHIVYGKSCRLPVELEHR 583 Query: 1114 AYWAIKELNFDFKLAGE 1164 AYWAI+ N DF AGE Sbjct: 584 AYWAIRNWNMDFYGAGE 634 Score = 103 bits (219), Expect(2) = 6e-74 Identities = 40/80 (50%), Positives = 55/80 (68%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++FV C CQR G IT R M + Y+L ++ FDV G D+MGPF S ++LV Sbjct: 1 MYEDSKEFVRRCTSCQRQGGITARDAMHLTYNLQVEIFDVWGIDFMGPFLKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHH 750 AVDYV+KWVEA+P AD H Sbjct: 181 AVDYVSKWVEAMPCSAADVH 240 Score = 50.1 bits (103), Expect(3) = 2e-17 Identities = 30/71 (42%), Positives = 37/71 (52%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *P G *G ATL L RK MK +P S++ LG Sbjct: 444 LLTVFCRIFLICLFNISA*PQVCGW*GVATLCLAPISRKRCRKVLSMK*DPPSLMTILGI 265 Query: 794 PNLGNMTYLSI 762 PNLG M +++I Sbjct: 264 PNLGKMIFVNI 232 Score = 46.4 bits (95), Expect(3) = 2e-17 Identities = 25/41 (60%), Positives = 28/41 (68%) Frame = -3 / -3 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+ +L GPI S P+TSN Sbjct: 233 SAALHGIASTHLET*STATRMYSQLRDLRKGPIKSIPQTSN 111 Score = 31.3 bits (62), Expect(3) = 2e-17 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 1163 SPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 SPA L+AQ ALCSSS G Q P*T+ ++P+G Sbjct: 633 SPAP*KSMFQFLMAQYALCSSSTGSRQDFP*TM**RNIPIG 511 Score = 59.3 bits (123), Expect = 1e-07 Identities = 35/129 (27%), Positives = 61/129 (47%) Frame = -2 / -1 Query: 1149 EIKVELFDCPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSI 970 ++ V + D P+ V + R L +++ I H++ L C+ + P + Sbjct: 619 KVHVPVPDGPVCSVLEFYR*SARLPVDYVIAEHSNWCLVCCPVCPQCVRQSILPSCCHFV 440 Query: 969 DDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSK 790 D LL + DL + LT LRM+R + + LS ++E +NEV +++ RD+K Sbjct: 439 DRLLQNILDLFVQYFCLTAGLRMVRSGHIVFGSHLS*EVSEGFINEVRPSVTYDHPRDTK 260 Query: 789 SWEYDLFKH 763 WE D +H Sbjct: 259 PWEDDFCEH 233 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 / +3 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 ++P+ R H + NA + I*CLG LYGT P Sbjct: 39 KLPEARRNHCS*CNAPYIQFASRDI*CLGYRLYGTFP 149 Score = 25.4 bits (49), Expect(2) = 1.1 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 / +1 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PK+W P* * R +LH Sbjct: 244 NHLPKVWYP*DGHK*RRVSLH 306
>LOC_Os01g33120:12001.t02882:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2921 Score = 251 bits (543), Expect(2) = 4e-71 Identities = 100/203 (49%), Positives = 139/203 (68%) Frame = +1 / +1 Query: 724 IPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYH 903 +P + AD + KM +IFPRFG PR +++D GSHFI F+ +L + VA+PYH Sbjct: 1 MPCRAADAKHAKKMFSEIIFPRFGTPRMVISDGGSHFIDKTFQDLLREMGTKQNVATPYH 180 Query: 904 PQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKA 1083 P++SGQ E N++IK IL +++ W KL DALWAY TA+K P+GMS Y +VYGK+ Sbjct: 181 PETSGQAETLNKQIKNIL*NTIHKMGT*WKDKLLDALWAYRTAHKTPIGMSLY*IVYGKS 360 Query: 1084 CYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDK 1263 C P+ELEH+ YWAI+ N DF+ A E I L+EWR +AY N+K++KE+ KRWHDK Sbjct: 361 C*LPIELEHQTYWAIQNWNMDFEGAEEWRKIQILELEEWRDKAYHNSKIYKERTKRWHDK 540 Query: 1264 RIQKREFNVGDYVLLYNSRLRFF 1332 RI+ ++F GD VL++NSR++ F Sbjct: 541 RIKIKKFKTGDKVLMFNSRVKLF 609 Score = 39.1 bits (79), Expect(2) = 4e-71 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKWEGP+ I GAI N GN +V Sbjct: 607 FGHGKLRSKWEGPFDIINTSSHGAITFRNNSGNIFKV 717 Score = 62.9 bits (131), Expect(2) = 3e-14 Identities = 42/96 (43%), Positives = 45/96 (46%) Frame = -3 / -1 Query: 1328 NLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAXX 1149 +L EL T SP LN IRLSC SL L YA LHSSN I S A Sbjct: 605 SLTLELNISTLSPVLNFLILIRLSCQRFVLSL*ILEL*YALSLHSSNSNICIFLHSSAPS 426 Query: 1148 XXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ CSSS G P*TI Y D+P+G Sbjct: 425 KSIFQFWIAQYVWCSSSIGSQHDFP*TI*YRDIPIG 318 Score = 37.3 bits (75), Expect(2) = 3e-14 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = -2 / -3 Query: 990 PILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISH 811 P S +D +L + DL + L+T RM+ N + L++ + E ++EV*+ I++ Sbjct: 267 PSCSHFVDRVLQNVLDLFVQCFCLSTCFRMVGCGNILFGAHLTQEVLEGFIDEV*SPITY 88 Query: 810 QISRDSKSWEYDLFKHL 760 S +K+ E D +HL Sbjct: 87 DHSWGTKAGEDDFREHL 37 Score = 34.5 bits (69), Expect(2) = 0.019 Identities = 24/64 (37%), Positives = 29/64 (45%) Frame = -3 / -1 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL G *G AT L K MKC+P S++ LG P G M +I + SA Sbjct: 194 PLVSGW*GVATFCLVPISRKRSWKVLSMKCDPPSLMTILGVPKRGKMISENIFLACLASA 15 Query: 737 FLVG 726 L G Sbjct: 14 ALHG 3 Score = 31.3 bits (62), Expect(2) = 0.019 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -2 / -3 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPF 1195 Q +I+ +E L +VP+ FL LG++IC PF Sbjct: 582 QYLISCLEFLDLDPLIVPAFCSFLVNLGVVICFIPPF 472
>LOC_Os02g19570:12002.t01750:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1699 Score = 261 bits (564), Expect(2) = 1e-69 Identities = 105/203 (51%), Positives = 141/203 (69%) Frame = +1 / +1 Query: 724 IPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYH 903 +P+ AD + KM +IFPRFG PR +++D GSHFI FR +L H VA+PYH Sbjct: 1 MPSSAADAKHAKKMFTEIIFPRFGTPRMVISDRGSHFIDKTFRDLLQDMGAKHNVATPYH 180 Query: 904 PQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKA 1083 PQ+SGQ E SN++IK ILQK VN+ W KL DALWAY TAYK P+G+S Y++V GK+ Sbjct: 181 PQTSGQAETSNKQIKNILQKTVNKMGTGWKDKLLDALWAYRTAYKTPIGLSSYQIVCGKS 360 Query: 1084 CYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDK 1263 C P+ELEH+AYWAI+ N DF+ A E I+ L+EW +AY N K++KE+ K +DK Sbjct: 361 CRLPVELEHRAYWAIRNWNMDFEGAREWRKMQIAELEEWSEKAYHNTKIYKERTKCCYDK 540 Query: 1264 RIQKREFNVGDYVLLYNSRLRFF 1332 RI+ ++F GD VL++NSR++FF Sbjct: 541 RIKIKKFKPGDKVLMFNSRVKFF 609 Score = 24.4 bits (47), Expect(2) = 1e-69 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPY 1368 F G+L S+WEGP+ Sbjct: 607 FGHGKLHSQWEGPF 648 Score = 64.3 bits (134), Expect(2) = 3e-19 Identities = 38/83 (45%), Positives = 45/83 (54%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G**G ATL L RK MKCEP S++ LG Sbjct: 251 LLTVFCRIFLICLFEVSA*PLVCG**GVATLCLAPMSCRRSRKVLSMKCEPLSLMTILGV 72 Query: 794 PNLGNMTYLSILMEVW*SAFLVG 726 PNLG M ++I + + SA L G Sbjct: 71 PNLGKMISVNIFLACFASAALDG 3 Score = 52.8 bits (109), Expect(2) = 3e-19 Identities = 41/97 (42%), Positives = 45/97 (46%) Frame = -3 / -3 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISNNHFSPAX 1152 KNL EL T SP LN I LS SL L YA+ LHSS+ I S A Sbjct: 608 KNLTLELNINTLSPGLNFLIFILLS*QHFVLSLYILVL*YAFSLHSSSSAICIFLHSLAP 429 Query: 1151 XXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 L+AQ ALCSSS G P TI D P+G Sbjct: 428 SKSIFQFLMAQYALCSSSTGSRHDFPQTI**EDNPIG 318 Score = 69.3 bits (145), Expect(2) = 1e-14 Identities = 39/137 (28%), Positives = 66/137 (48%) Frame = -2 / -2 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++++E Y F++ +L F L ++ICL +PF +D+ P + F++ + + D Sbjct: 582 QHFVSWLEFLNFYPFIITALRPFFVYLSVVICLFTPFFKFSDLHFPPFSCSFKVHIPVPD 403 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 PI + + RE L ++ I ++ L CI +F P S +D LL + Sbjct: 402 GPICSMLEFYRESA*LPTDYLIGGQSNRCLVCCPVCPQCIQQFILPSCSHFVDRLLQNIL 223 Query: 945 DLPITQLHLTTRLRMIR 895 DL + LT L MIR Sbjct: 222 DLFV*SFCLTAGLWMIR 172 Score = 32.2 bits (64), Expect(2) = 1e-14 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = -2 / -2 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVI 742 ++E ++EV T +++ R +K WE DL +HL G + I Sbjct: 132 VSEGFVDEVRTSVTYDHPRGTKPWEDDLCEHLLGMLCI 19
>LOC_Os11g22780:12011.t01948:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 747 Score = 245 bits (530), Expect(2) = 1e-68 Identities = 92/175 (52%), Positives = 126/175 (72%) Frame = +1 / +1 Query: 808 LMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKN 987 +++D GSHFI FR L + H +A+PYHPQ+SGQ E SN++IK ILQK V+ K+ Sbjct: 4 VISDGGSHFIDKTFRNFLQELGAQHNIATPYHPQTSGQAETSNKQIKNILQKTVDEMGKS 183 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEK 1167 W +KL DALWAY TAYK P+GMSPY++VY K C+ P+ELEH A+WAI+ N D K A + Sbjct: 184 WKNKLPDALWAYRTAYKTPIGMSPYQLVYRKTCHLPVELEHMAHWAIQTWNMDLKEARQH 363 Query: 1168 WLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 + L+EWR +AY NAK++K++ K+WH+KRI+ +EF GD VL +NSR++ F Sbjct: 364 RKMQLFELEEWRDKAYHNAKIYKDRTKKWHEKRIKPKEFKAGDKVLQFNSRVKLF 528 Score = 36.8 bits (74), Expect(2) = 1e-68 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L SKW GP + + GA+ + N EGN +V Sbjct: 526 FGHGKLRSKWMGPCTVIDASSHGAVTLCNNEGNIFKV 636 Score = 81.7 bits (172), Expect = 2e-14 Identities = 52/159 (32%), Positives = 78/159 (49%) Frame = -2 / -1 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 QD++ EL L ++P L LGI++ L PF+* ++ P+L+G I V D Sbjct: 501 QDLVPCFELLGLNPLLMPFFGSVLINLGIVVGLVPPFL*LKELHLPVLSGFL*IHVPSLD 322 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPILSRSIDDLL*DQF 946 P+ VF L R++T L ++ + *HA G L CI P L ID L*+ Sbjct: 321 SPVCHVF*LYRKVTSLPVDKLVW*HADGRLISSPICPKCIR*LVLP*LPHLIDSFL*NIL 142 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV 829 DL + L+T L MIR N M+ ++E ++E+ Sbjct: 141 DLFVACFCLSTCLGMIRSGNVMLSPKFL*KVSEGLIDEM 25 Score = 45.5 bits (93), Expect(2) = 9e-11 Identities = 25/48 (52%), Positives = 28/48 (58%) Frame = -3 / -2 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL +T SP LNS IR SCH L SL LA A LHSS+ Sbjct: 527 KSFTRELNCKTLSPALNSLGLIRFSCHFLVLSL*ILALW*ALSLHSSS 384 Score = 42.8 bits (87), Expect(2) = 9e-11 Identities = 19/29 (65%), Positives = 22/29 (75%) Frame = -3 / -2 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ A+CS+S G+*Q *T YGDMPMG Sbjct: 323 IAQCAMCSNSTGR*QVFL*TSWYGDMPMG 237 Score = 57.9 bits (120), Expect = 3e-07 Identities = 47/143 (32%), Positives = 60/143 (41%) Frame = +2 / +2 Query: 878 TIELHLLIILSLVVKWS*VIGRSN*SYKRSSIDLERIGLANLTMHYGLMGLLIRIPWACH 1057 +I L L II V K +S Y++ S+ G + MH+G +GLLIR P ACH Sbjct: 74 SITLPLRIIPRQVDKQKQATNKSRIFYRKLSMRWGSHGRTSYLMHFGHIGLLIRRPSACH 253 Query: 1058 RIKWFMVRPVISLLSWNTKLIGQSKSSTLISNLPVRSGCLISAH*MNGEPRHMRMPSCSR 1237 R V S NT G S+ T I P +G S * NG R MP R Sbjct: 254 HTNLSTGRLVTFR*S*NTWHTGLSRLGTWI*RKPDSTGRCSSLS*RNGGTRPTTMPRFIR 433 Query: 1238 KRLRDGTTNEYKNESSM*VIMSC 1306 ++G + SS SC Sbjct: 434 TEPKNGMRSGLSPRSSKQGTRSC 502 Score = 37.7 bits (76), Expect = 0.37 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 / -3 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CV ++ + VTC W SYKQS+ P VH+ C Sbjct: 319 PSVPCVLTLPEGDKSSCRQVGMVTCRWASYKQSYMPKVHQVAC 191 Score = 34.5 bits (69), Expect = 3.4 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 / +3 Query: 1008 CTMGLWDCL*ESHGHVTV 1061 CT+G+ DCL*++H HVT+ Sbjct: 204 CTLGI*DCL*DAHRHVTI 257
>LOC_Os02g22700:12002.t02057:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5043 Score = 232 bits (501), Expect(3) = 8e-68 Identities = 93/195 (47%), Positives = 127/195 (65%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+W T+ +D+++FV CQR G IT R MP+ Y+L ++ Sbjct: 3359 YGGHYGAFRTQGKIWQSGFFWLTMHEDSKEFVRRSTSCQRQGGITARDAMPLTYNLQVEI 3538 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P D + KM ++FPRFG P Sbjct: 3539 FDVWGIDFMGPFPKSCNCEYILVAVDYVSKWVEAMPCSATDVKHAKKMFTEIVFPRFGNP 3718 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSR 981 R +++D GSHF FR +L H VA+PYHPQ++GQ E+ N++IK ILQK VN+ Sbjct: 3719 RMVISDRGSHFFDKTFRDLLRDMGAKHNVATPYHPQTNGQAEILNKQIKNILQKTVNKMG 3898 Query: 982 KNWSSKLDDALWAYG 1026 W +L DA+ G Sbjct: 3899 TGWKDRLPDAVGDMG 3943 Score = 34.1 bits (68), Expect(3) = 8e-68 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+ +LY+ +G++RR E+G Sbjct: 3212 ENQRKLKYESRCHIWDELYLYRVHSNGLLRRCVPTEEG 3325 Score = 32.2 bits (64), Expect(3) = 8e-68 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 / +2 Query: 239 WYADYANYIVAKYIP 283 WYA+ NY+V+KYIP Sbjct: 3161 WYANIVNYMVSKYIP 3205 Score = 90.0 bits (190), Expect(4) = 1e-22 Identities = 55/118 (46%), Positives = 66/118 (55%) Frame = -3 / -1 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL *G *G ATL L RK K EP S++ LG Sbjct: 3891 LLTVFCRIFLICLFNISA*PLV*GW*GVATLCLAPMSRRRSRKVLSKK*EPLSLMTILGL 3712 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG ++I + + S L GIASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 3711 PNLGKTISVNIFLACFTSVALHGIASTHLET*STATRMYSQLQDLGKGPMKSIPQTSN 3538 Score = 32.7 bits (65), Expect(4) = 1e-22 Identities = 16/25 (64%), Positives = 17/25 (68%) Frame = -3 / -2 Query: 1115 ALCSSSRGK*QALP*TILYGDMPMG 1041 ALCSSS G P*TI GD+PMG Sbjct: 5036 ALCSSSTGIWHDFP*TI**GDIPMG 4962 Score = 29.5 bits (58), Expect(4) = 1e-22 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -1 / -3 Query: 283 WYVFGYDIVCIIGIPR 236 WY+ GY +V +GIP+ Sbjct: 3205 WYILGYHVVYYVGIPQ 3158 Score = 29.0 bits (57), Expect(4) = 1e-22 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -1 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S V Q KP C L V + +PP* Sbjct: 3510 GIASRAVIPPCLWQLVLLLTNSFESSCIVSQKKPLCQILPWVRNAP*WPP* 3358 Score = 80.8 bits (170), Expect(2) = 6e-15 Identities = 32/55 (58%), Positives = 39/55 (70%) Frame = +1 / +1 Query: 955 LQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAY 1119 L K V+R DALWAY TAYK P+GMSPY++VYGK+C P+ELEH+AY Sbjct: 4876 LTKGVSRPPARKDYSSTDALWAYRTAYKTPIGMSPYQIVYGKSCQIPVELEHRAY 5040 Score = 28.6 bits (56), Expect(2) = 6e-15 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +3 / +1 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A LLA + + +C ++P+ R H + NA + I CLG L+GT Sbjct: 3394 QDLAKWLLLADNARRFKRICQKKHKLPEARRNHCS*CNAPHIQFASRDIRCLGYRLHGTF 3573 Query: 657 P 659 P Sbjct: 3574 P 3576 Score = 77.1 bits (162), Expect = 5e-13 Identities = 52/171 (30%), Positives = 82/171 (47%) Frame = -2 / -3 Query: 990 PILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISH 811 P S +D LL + DL + LT LRM+R + ++ +S ++E + EV T +++ Sbjct: 3907 PSCSHFVDRLLQNILDLFV*YFCLTVGLRMVRSGHIVLGSHVS*EVSEGLVEEVRTSVTY 3728 Query: 810 QISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKAR 631 R +KSWE D +HL G + I + SL PL D++ + +V RE SH + Sbjct: 3727 DHPRVTKSWENDFCEHLLGMLHIRGAAWHSLNPLGDIVDCHQNVLAVARLRERSHEVYTP 3548 Query: 630 DIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQDKLTGILEESGPIET*LQYL 478 +I++ + + + H +T SD LA DK I P E L L Sbjct: 3547 NIEYLDLQIVCEGHCITSSDSSLPLAACASSDKFF*IFVHCQPEEATLPNL 3395
>LOC_Os07g22750:12007.t01978:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1927 Score = 231 bits (498), Expect(3) = 1e-67 Identities = 91/178 (51%), Positives = 122/178 (68%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K QSGF+WPT+++D+++FV C CQR G IT + MP+ Y+L ++ Sbjct: 1382 YGGHYGAFRTQAKT*QSGFFWPTMYEDSKEFVRRCTNCQRQGGITTQDAMPLTYNLQVEI 1561 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MG FP S Y ++LVAVDYV+KWVEA+P AD + KM IFPRFG P Sbjct: 1562 FDVWGIDFMGLFPKSRNYEYILVAVDYVSKWVEAMPCSAADAKHAKKMFTETIFPRFGTP 1741 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNR 975 R +++D GSHFI FR +L + H VA+PYHPQ+SGQ + N++IK ILQ VN+ Sbjct: 1742 RMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAKTLNKQIKNILQNTVNK 1915 Score = 36.8 bits (74), Expect(3) = 1e-67 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA+ NY+V+ YIPP Sbjct: 1228 SNPWYANIVNYMVSMYIPP 1284 Score = 29.9 bits (59), Expect(3) = 1e-67 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +2 / +1 Query: 308 KKFFFDLRHYFWDDPHLYKEGVDGV 382 +K ++ R + WD+P+LY+ DG+ Sbjct: 1297 RKLKYESRCHIWDEPYLYRVCFDGL 1371 Score = 78.5 bits (165), Expect(3) = 4e-18 Identities = 46/97 (47%), Positives = 54/97 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR *PL G G ATL L RK MK EP S++ LG Sbjct: 1914 LLTVFCRIFLICLFNVFA*PLVCGWYGVATLCLAPISRRRSRKVLSMK*EPPSLMTILGV 1735 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATK 684 PNLG M ++I + + SA L GIASTHL T*STAT+ Sbjct: 1734 PNLGKMVSVNIFLACFASAALHGIASTHLET*STATR 1624 Score = 31.8 bits (63), Expect(3) = 4e-18 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -1 / -2 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY IV +GIPR Sbjct: 1281 WYVHGYHIVYYVGIPR 1234 Score = 30.4 bits (60), Expect(3) = 4e-18 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ +VI P LW TN S VGQ KP C L V +PP* Sbjct: 1533 GIAS*VVIPPCLWQFVHLLTNSFESSYIVGQKKPLCQVLAWVRKAP*WPP* 1381 Score = 61.1 bits (127), Expect(2) = 6e-10 Identities = 45/168 (26%), Positives = 77/168 (45%) Frame = -2 / -1 Query: 981 SRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQIS 802 S +D +L + DL + LT L M+ + + LS ++E +NEV T +++ Sbjct: 1921 SHFVDRILQNILDLFV*CFCLTASLWMVWSGHIVFGSHLS*EVSEGFVNEVRTSVTYDHP 1742 Query: 801 RDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIK 622 R +KSWE +HL G + I + SL P D++ + +V + RE SH + +IK Sbjct: 1741 RGTKSWEDGFCEHLLGMLRIRGAARHSLNPFGDIVDCHQNVLIVARLREKSHKVYTPNIK 1562 Query: 621 WFNDK*IVHRHFLTLSDIPYSLAFVTRQDKLTGILEESGPIET*LQYL 478 + + + + H + SD LA ++ + P E L L Sbjct: 1561 YLDLQIVCEGHCILSSDSSLPLAVCASSNEFF*VFIHCWPEEATLSSL 1418 Score = 29.9 bits (59), Expect(2) = 6e-10 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -3 Query: 285 GGMYLATI*FA*SAYHG 235 GGMY+ TI*F AYHG Sbjct: 1283 GGMYMDTI*FTMLAYHG 1233 Score = 30.4 bits (60), Expect(2) = 0.021 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 / +1 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 ++P+ R H + NA + I*CLG LYGT P Sbjct: 1489 KLPEARRNHYSRCNAPHIQFASRDI*CLGYRLYGTFP 1599 Score = 29.0 bits (57), Expect(2) = 0.021 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +3 / +1 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P* * RF+LH Sbjct: 1714 NHLPKIWYP*DGHK*RRFSLH 1776
>LOC_Os06g35010:12006.t03198:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1345 Score = 119 bits (254), Expect(4) = 5e-67 Identities = 47/101 (46%), Positives = 64/101 (63%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 K W KL DALWA TAYK +GMSPY +VY K C+ P+ELEH+A+WAI+ N D G Sbjct: 1027 KTWKHKLPDALWACRTAYKTSIGMSPY*LVYEKTCHLPVELEHRAHWAIRT*NMDLGQVG 1206 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREF 1284 +S L+EWR Y N ++ K++ K H +RI+ +E+ Sbjct: 1207 RHQHMHLSELEEWRDTFYHNNRMCKKQTKV*HYRRIKVKEY 1329 Score = 82.6 bits (174), Expect(4) = 5e-67 Identities = 36/78 (46%), Positives = 48/78 (61%) Frame = +1 / +2 Query: 760 KMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNR 939 KM VIFPRFG P ++T+ GSHFI + L + H +A+PY PQ+ G+VE N+ Sbjct: 806 KMFHKVIFPRFGTPWMVITN*GSHFIDKTSKNFLQELGAQHNIATPYRPQTGGKVETYNK 985 Query: 940 EIKLILQKIVNRSRKNWS 993 +IK I QK VN K+ S Sbjct: 986 QIKNIPQKAVNERGKHGS 1039 Score = 76.2 bits (160), Expect(4) = 5e-67 Identities = 25/61 (40%), Positives = 42/61 (68%) Frame = +1 / +2 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPF 657 K+ Q+G +WPT+++D ++F+ C CQ+ IT R MP+ Y++ ++ F+V G +YM PF Sbjct: 368 KIWQNGSFWPTMYEDTKEFIQRCARCQKHVGITARDAMPLTYNIQVELFNVWGINYMKPF 547 Query: 658 P 660 P Sbjct: 548 P 550 Score = 48.3 bits (99), Expect(4) = 5e-67 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +1 / +1 Query: 652 PFPSSNGYTHVLVAVDYVTKWVEAI 726 PFP S+ H+LVAVDYV+KWVEAI Sbjct: 706 PFPKSHDCEHILVAVDYVSKWVEAI 780 Score = 36.8 bits (74), Expect(3) = 0.003 Identities = 17/28 (60%), Positives = 20/28 (71%) Frame = -3 / -3 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPM 1044 +AQ ALCSSS G+ Q *T YGD+PM Sbjct: 1172 MAQCALCSSSTGRWQVFS*TS*YGDIPM 1089 Score = 28.1 bits (55), Expect(3) = 0.003 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 / -3 Query: 725 IASTHLVT*STATKT*VYPLELGNG 651 IASTHL T*STAT+ + G G Sbjct: 779 IASTHLDT*STATRMCSQSWDFGKG 705 Score = 22.6 bits (43), Expect(3) = 0.003 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDC 486 GI+ R VI WH + N S VGQ P C Sbjct: 483 GIASRAVIPTCFWHLAHL*MNSFVSSYIVGQKDPFC 376
>LOC_Os01g39530:12001.t03480:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2069 Score = 213 bits (460), Expect(3) = 5e-64 Identities = 84/172 (48%), Positives = 114/172 (66%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG+ RT K+ QSGF+W +++ D ++FV C CQ+ IT R MP+ Y+L ++ Sbjct: 1551 YGGHFGAFRTHAKIWQSGFFWLSMYDDTKEFVRRCTSCQKHRGITARDAMPLTYNLQVEL 1730 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP Y ++LVAVDYV KWVEA+P + AD + +M +IFPRF P Sbjct: 1731 FDVWGIDFMGPFPKFYDYEYILVAVDYVPKWVEAMPCRAADAKHARRMFHEIIFPRFRTP 1910 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 R +++D GSHFI FR L + H +A+PYHPQ+SGQ E SN++IK IL Sbjct: 1911 RMVISDGGSHFIDKTFRNFLQELGAQHNIATPYHPQTSGQAETSNKQIKNIL 2066 Score = 38.6 bits (78), Expect(3) = 5e-64 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = +2 / +3 Query: 293 TYQQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 T + KK+ ++ + WD P+LY+ +G++RR ++G Sbjct: 1398 TGKNKKRLIYESHRHLWDAPYLYRVCSNGLLRRCVSKDEG 1517 Score = 33.6 bits (67), Expect(3) = 5e-64 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 / +3 Query: 212 VIRASHSAPWYADYANYIVAKYIP 283 +++ + S PWYA N++VA Y+P Sbjct: 1326 LLKVTDSDPWYATIVNFMVAGYVP 1397 Score = 40.0 bits (81), Expect = 0.075 Identities = 32/78 (41%), Positives = 37/78 (47%) Frame = -3 / -2 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL G* G A L RK MK +P S+I G G + +I SA Sbjct: 2026 PLVWG*YGVAMLC*APSSCKKFRKVLSMK*DPPSLITIRGVLKRGKIIS*NIRRACLASA 1847 Query: 737 FLVGIASTHLVT*STATK 684 L GIASTH T*STAT+ Sbjct: 1846 ALHGIASTHFGT*STATR 1793
>LOC_Os10g18960:12010.t01443:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2374 Score = 191 bits (411), Expect(4) = 9e-63 Identities = 76/145 (52%), Positives = 99/145 (68%) Frame = +1 / +2 Query: 505 PTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHV 684 PT++KD ++FV C CQR G IT R MP+ Y+L ++ FDV G D+MGPFP S ++ Sbjct: 1937 PTMYKDLKEFVRRCTSCQRQGGITARHAMPLTYNL*VEIFDV*GIDFMGPFPKSRNCEYI 2116 Query: 685 LVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLA 864 LVAVDYV+KWVEA+ AD + KM +IFPRFG PR +++D GSHFI FR +L Sbjct: 2117 LVAVDYVSKWVEAMSCSAADARHAKKMFTEIIFPRFGTPRMVISDGGSHFIDKTFRDLLR 2296 Query: 865 KYDVNHRVASPYHPQSSGQVELSNR 939 + H VA+PYHPQ+SGQ E SN+ Sbjct: 2297 EMGAKHNVATPYHPQTSGQEETSNK 2371 Score = 39.6 bits (80), Expect(4) = 9e-63 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 / +1 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ R + WD+P+LY+ DG++RR E+G Sbjct: 1738 KLKYESRRHIWDEPYLYRVCSDGLLRRCVPTEEG 1839 Score = 35.0 bits (70), Expect(4) = 9e-63 Identities = 10/16 (62%), Positives = 14/16 (87%) Frame = +2 / +2 Query: 239 WYADYANYIVAKYIPP 286 WYA+ NY+V+KY+PP Sbjct: 1676 WYANIVNYMVSKYVPP 1723 Score = 34.1 bits (68), Expect(4) = 9e-63 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYW 504 YGG++ RT K+ QSGF+W Sbjct: 1873 YGGHYGAFRTQAKIWQSGFFW 1935 Score = 76.2 bits (160), Expect(2) = 3e-14 Identities = 48/99 (48%), Positives = 56/99 (56%) Frame = -3 / -2 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL G *G ATL L RK MK EP S++ LG PNLG M ++I + SA Sbjct: 2349 PLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGVPNLGKMISVNIFLACLASA 2170 Query: 737 FLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 L IASTHL T*STAT+ +LG GP+ S P TSN Sbjct: 2169 ALHDIASTHLET*STATRMYSQLRDLGKGPMKSIP*TSN 2053 Score = 29.9 bits (59), Expect(2) = 3e-14 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIP+ Sbjct: 1720 WYVLGYHVVYYVGIPQ 1673 Score = 65.7 bits (137), Expect = 1e-09 Identities = 38/130 (29%), Positives = 65/130 (50%) Frame = -2 / -1 Query: 921 LTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVI 742 L+T L M+R + + S ++E +NE+ T +++ S +KSWE D +HL G I Sbjct: 2353 LSTGLWMVRSSHIVFGSHFS*EVSEGFINEMRTSVTYDHSGGTKSWEDDFCEHLLGMPCI 2174 Query: 741 SIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPY 562 + SLYPL D++ + +V RE SH + +I++ + + + H + SD Sbjct: 2173 RSAARHSLYPLGDIVDCHQNVLAVARLRERSHEVYTLNIEYLDLQIVCEGHCMASSDSSL 1994 Query: 561 SLAFVTRQDK 532 LA D+ Sbjct: 1993 PLAACASSDE 1964 Score = 32.2 bits (64), Expect(2) = 0.021 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +3 / +1 Query: 711 VGRGYPH*KC*SPHLH*DA*ISHIPKIWSP*IFDD**RFTLH 836 VGRGY +C D +H+PKIW P * RF+ H Sbjct: 2143 VGRGYVVQRCGCKACQEDVHRNHLPKIWYPQNGHK*RRFSFH 2268 Score = 27.2 bits (53), Expect(2) = 0.021 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +3 / +1 Query: 549 RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 ++PK R H + NA + I CLG L+GT P Sbjct: 1981 KLPKARRNHCSPCNAPHIQFVSRDIRCLGYRLHGTFP 2091
>LOC_Os08g20060:12008.t01824:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3933 Score = 219 bits (472), Expect(2) = 3e-62 Identities = 84/172 (48%), Positives = 116/172 (67%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ +SGF WP+++ D ++FV C CQ+ G IT R MP+ Y+L +K Sbjct: 3415 YGGHYGAFRTHAKIWESGFLWPSMYDDTKEFVRRCTRCQKHGGITARDAMPLTYNLQVKL 3594 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S+ ++LVAVDYV+KWVE +P + D + +M +IFP FG P Sbjct: 3595 FDVWGIDFMGPFPKSDDCEYILVAVDYVSKWVETMPCRATDAKHARRMFHEIIFPCFGTP 3774 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 R +++D GSHFI FR L + H +A+PYHPQ+SGQ E SN++IK IL Sbjct: 3775 RMVISDGGSHFIDKTFRNFLQELGAQHNIATPYHPQTSGQAETSNKQIKNIL 3930 Score = 42.3 bits (86), Expect(2) = 3e-62 Identities = 14/40 (35%), Positives = 25/40 (62%) Frame = +2 / +1 Query: 293 TYQQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 T + KK+ ++ R + WD P+LY+ DG++RR ++G Sbjct: 3262 TGENKKRLIYESRRHLWDAPYLYRVCSDGLLRRCVPVDEG 3381 Score = 57.4 bits (119), Expect(2) = 1e-09 Identities = 40/101 (39%), Positives = 47/101 (46%) Frame = -3 / -2 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL G* G A L RK MK +P S+I G P G + +I S Sbjct: 3890 PLVWG*YGVAMLC*APSSCKKFRKVLSMK*DPPSLITIRGVPKQGKIIS*NIRRACLASV 3711 Query: 737 FLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSNGL 615 L GI STH T*STAT+ + G GP+ S P TSN L Sbjct: 3710 ALHGIVSTHFDT*STATRIYSQSSDFGKGPMKSMPHTSNSL 3588 Score = 26.7 bits (52), Expect(2) = 1e-09 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP 444 GI+ R VI P WH +TN S GQ P VL+ PP Sbjct: 3566 GIASRAVIPPCFWHLVHLRTNSFVSSYIDGQRNPLSQIFACVLNAP**PP 3417 Score = 56.5 bits (117), Expect = 8e-07 Identities = 38/131 (29%), Positives = 67/131 (51%) Frame = -2 / -1 Query: 945 DLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFK 766 DL + + L+T L MIR N ++ L + ++E ++E+ +++ SK+ E +L K Sbjct: 3918 DLFVARFCLSTCLGMIRSGNVVLSSELLQKISEGLIDEMRPSVTYHHPWSSKTREDNLMK 3739 Query: 765 HLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHF 586 H G + + + LYPL +++ + D+ IG E SH + A IK + K + H Sbjct: 3738 HPAGVLGVCGPAWHCLYPLRHIVNGHQDILAVIGLWERSHEVDAPYIK*LDLKIVCQWHR 3559 Query: 585 LTLSDIPYSLA 553 ++ SD LA Sbjct: 3558 ISSSDPSMLLA 3526
>LOC_Os08g20050:12008.t01823:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2217 Score = 163 bits (351), Expect(4) = 5e-62 Identities = 62/111 (55%), Positives = 83/111 (74%) Frame = +1 / +1 Query: 1015 WAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAGEKWLFDISSLD 1194 WAY TAYK P+GMSPY++VYGK+C +ELEH+AYWAI+ N DF+ AGE I+ L+ Sbjct: 505 WAYRTAYKTPIGMSPYQIVYGKSCRLLVELEHRAYWAIRNWNMDFEGAGEWRKMQIAELE 684 Query: 1195 EWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFFAGRLL 1347 EWR +AY N ++ KE+ KRWHDKRI+ ++F GD VL++NSR++ F R L Sbjct: 685 EWRERAYHNVRICKERKKRWHDKRIKIKKFKPGDKVLMFNSRVKLFGHRKL 837 Score = 94.5 bits (200), Expect(4) = 5e-62 Identities = 35/73 (47%), Positives = 51/73 (69%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D+++F C QR G IT R MP+ Y+L ++ FDV G D++GPFP S ++LV Sbjct: 1 MYEDSKEFARRCTSYQRQGGITARDAMPLTYNLQVEIFDVWGIDFIGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIP 729 AVDYV+KW EA+P Sbjct: 181 AVDYVSKWDEAMP 219 Score = 29.5 bits (58), Expect(4) = 5e-62 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 +L SKWEGP+ + + GAI + + N +V Sbjct: 832 KLCSKWEGPFDVIDTSSHGAITLRDKLVNIFKV 930 Score = 24.0 bits (46), Expect(4) = 5e-62 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +3 / +1 Query: 774 SHIPKIWSP*IFDD**RFTLH 836 +H+PKIW P * R +LH Sbjct: 265 NHLPKIWYPQDGHK*RRLSLH 327 Score = 67.5 bits (141), Expect(3) = 5e-27 Identities = 46/104 (44%), Positives = 51/104 (49%) Frame = -3 / -2 Query: 1352 LERSLPAKNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSNELISN 1173 L L K+L EL T SP LN I LSC SL+ L A LHSS+ I Sbjct: 842 LHNFLWPKSLTLELNISTLSPGLNFLIFILLSCQRFFLSLHILTLW*ALSLHSSSSAICI 663 Query: 1172 NHFSPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 SPA L+AQ ALCSSS P*TI YGD+PMG Sbjct: 662 FLHSPAPSKSMFQFLMAQYALCSSSTSSRHDFP*TI*YGDIPMG 531 Score = 49.2 bits (101), Expect(3) = 5e-27 Identities = 31/73 (42%), Positives = 38/73 (52%) Frame = -3 / -1 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FCR S *PL G *G ATL L +K MK EP S++ LG Sbjct: 465 LLTVFCRIFLIC*FDVSA*PLVCGW*GVATLCLAPISRRRSQKVLSMK*EPPSLMTILGV 286 Query: 794 PNLGNMTYLSILM 756 PNLG M ++I + Sbjct: 285 PNLGKMISVNIFL 247 Score = 44.1 bits (90), Expect(3) = 5e-27 Identities = 22/38 (57%), Positives = 27/38 (71%) Frame = -3 / -2 Query: 734 LVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 L GIAS+HL T*STAT+ +LG GP+ S P+TSN Sbjct: 224 LHGIASSHLET*STATRMYSQLRDLGKGPMKSIPQTSN 111 Score = 111 bits (237), Expect = 2e-23 Identities = 48/104 (46%), Positives = 64/104 (61%) Frame = +1 / +2 Query: 736 NADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSS 915 +AD + KM +IFPRFG PR +++D GSHFI F +L + H VA+PYHPQ+S Sbjct: 227 HADARHAKKMFTEIIFPRFGTPRMVISDGGSHFIDKTF*DLLREMGAKHNVATPYHPQTS 406 Query: 916 GQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPM 1047 GQ E SN +IK ILQK VN+ W +L DA G ++P+ Sbjct: 407 GQAETSN*QIKNILQKTVNKMGTRWKDRLPDARGHTGQHTRHPL 538 Score = 41.8 bits (85), Expect = 0.021 Identities = 26/86 (30%), Positives = 43/86 (50%) Frame = -2 / -3 Query: 1011 CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNE 832 C+ + P S +D LL + +L + LT L M+R + + LS ++E +NE Sbjct: 502 CVRQSILPSCSHFVDCLLQNILNLLV*CFCLTAGLWMVRSGHIVFGSHLS*EVSEGFVNE 323 Query: 831 V*TVISHQISRDSKSWEYDLFKHLNG 754 V +++ +KSWE D +HL G Sbjct: 322 VRASVTYDHPGGTKSWEDDFCEHLLG 245
>LOC_Os04g14060:12004.t01225:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1740 Score = 196 bits (423), Expect(3) = 7e-61 Identities = 75/155 (48%), Positives = 101/155 (65%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT + QSGF+WPT++ D+++FV C C+R G IT MP+ Y+L ++ Sbjct: 1273 YGGHYGAFRTQVNIWQSGFFWPTMYGDSKEFVRRCTSCERQGGITAHDAMPLTYNLQVEI 1452 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDY++KWVEA+ AD KM +IFPRFG P Sbjct: 1453 FDVWGIDFMGPFPKSRNCEYILVAVDYISKWVEAMSCSAADAKHGKKMFTEIIFPRFGTP 1632 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHP 906 R +++D GSHFI FR +L H VA+PYHP Sbjct: 1633 RMVISDGGSHFIDKTFRDLLRDLGAKHNVATPYHP 1737 Score = 43.2 bits (88), Expect(3) = 7e-61 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +2 / +1 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ RH+ WD+P+LY+ DG++RR E+G Sbjct: 1138 KLKYESRHHIWDEPYLYRVCSDGLLRRCVPTEEG 1239 Score = 35.4 bits (71), Expect(3) = 7e-61 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +2 / +1 Query: 236 PWYADYANYIVAKYIP 283 PWYA+ NY+V+KYIP Sbjct: 1072 PWYANIVNYMVSKYIP 1119 Score = 76.7 bits (161), Expect(3) = 6e-15 Identities = 46/95 (48%), Positives = 55/95 (57%) Frame = -3 / -2 Query: 905 G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVG 726 G *G ATL L RK MK EP S++ LG PNLG M ++I + + SA L Sbjct: 1736 GW*GVATLCLAPKSRRRSRKVLSMK*EPPSLMTILGVPNLGKMISVNIFLPCFASAALHD 1557 Query: 725 IASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 IASTHL *STAT+ +LG GPI S P+TSN Sbjct: 1556 IASTHLEM*STATRIYSQLRDLGKGPIKSIPQTSN 1452 Score = 29.5 bits (58), Expect(3) = 6e-15 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 / -3 Query: 284 VVCIWLRYSLHNRHTTVHYVKRG*HLIAHQ 195 VVC W+ YS HTT R H+I+ + Sbjct: 1120 VVCTWIPYSSLY*HTTAGVTNRHQHIISQE 1031 Score = 23.1 bits (44), Expect(3) = 6e-15 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ VI P L TN S VGQ KP C L V + +PP* Sbjct: 1424 GIAS*AVIPPCLSQLVHLLTNSFESPYIVGQKKPLCQILTWVRNAP*WPP* 1272 Score = 60.6 bits (126), Expect(2) = 1e-09 Identities = 36/127 (28%), Positives = 65/127 (51%) Frame = -2 / -1 Query: 909 LRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFS 730 L M+R + + +S ++E ++EV T +++ R +KSWE D +HL + I + Sbjct: 1740 LWMVRSGHIVFGSQVS*EVSEGFVDEVRTSVTYDHPRGTKSWEDDFCEHLLAMLCIRGTA 1561 Query: 729 GDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAF 550 SL PL DV+ + ++ G RE SH + +I++F+ + + H + SD LA Sbjct: 1560 RHSLNPLGDVVDCHQNILAVAGLRERSHKVYTPNIEYFDLQIVCEGHCIMSSDSSLPLAA 1381 Query: 549 VTRQDKL 529 ++L Sbjct: 1380 CASSNEL 1360 Score = 29.5 bits (58), Expect(2) = 1e-09 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY IV I IPR Sbjct: 1119 WYVLGYHIVHYISIPR 1072 Score = 29.9 bits (59), Expect(3) = 0.60 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLHSWCFPQ 854 +H+PKIW P* * RF+LH P+ Sbjct: 1605 NHLPKIWYP*DGHK*RRFSLHRQNLPR 1685 Score = 26.3 bits (51), Expect(3) = 0.60 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 / +3 Query: 211 CHPRFT*CTVVCRLCKLYRSQIHTTQ 288 C RF VVC +LY Q+HTT+ Sbjct: 1047 C**RFVTPAVVC*YSELYGIQVHTTR 1124 Score = 23.5 bits (45), Expect(3) = 0.60 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +3 / +3 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A LLA +++ V + ++ + R H + NA + I CLG LYGT Sbjct: 1308 QYLAKWLLLADNVRRLKRVR*KMHKLREARRNHCS*CNAPHIQFASRNIRCLGYRLYGTF 1487 Query: 657 P 659 P Sbjct: 1488 P 1490
>LOC_Os12g21520:12012.t01894:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1390 Score = 181 bits (389), Expect(2) = 6e-60 Identities = 75/143 (52%), Positives = 94/143 (65%) Frame = +1 / +1 Query: 724 IPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYH 903 +P + AD + KM +IFPRFG PR +++D GSHFI FR +L K V +PYH Sbjct: 1 MPCRAADANHVKKMFSKIIFPRFGTPRMVVSDGGSHFIDKTFRDLLHKMGAKQDVPTPYH 180 Query: 904 PQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKA 1083 PQ+S Q E SN++IK IL K VN+ W KL DALWAY TAYK P+ MSPY++VY K Sbjct: 181 PQTSEQAETSNKQIKNILLKTVNKMGIGWKDKLSDALWAYRTAYKTPIAMSPYQIVYRKT 360 Query: 1084 CYFPLELEHKAYWAIKELNFDFK 1152 LELEH+AYWAI+ N DF+ Sbjct: 361 YRLLLELEHRAYWAIRNWNMDFE 429 Score = 72.5 bits (152), Expect(2) = 6e-60 Identities = 25/56 (44%), Positives = 42/56 (75%) Frame = +1 / +2 Query: 1159 GEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLR 1326 GE ++ L+EWR +AY ++K++K++ KRW+DKRI ++F GD VL++NSR++ Sbjct: 437 GEWRQMQLAELEEWRDKAYHSSKIYKKRTKRWYDKRIDIKKFKPGDKVLMFNSRVK 604 Score = 44.6 bits (91), Expect(3) = 2e-13 Identities = 32/83 (38%), Positives = 37/83 (44%) Frame = -3 / -3 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+F R S L *G *G T L L RK MKC+P S+ LG Sbjct: 251 LLTVFSRIFLICLFDVSACSLV*GW*GVGTSCLAPILCRRSRKVLSMKCDPPSLTTILGV 72 Query: 794 PNLGNMTYLSILMEVW*SAFLVG 726 PN G M + +I SA L G Sbjct: 71 PNRGKMIFENIFFTWLASAALHG 3 Score = 42.3 bits (86), Expect(3) = 2e-13 Identities = 15/37 (40%), Positives = 27/37 (72%) Frame = -2 / -1 Query: 1299 IITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI* 1189 +I+++E ++ S ++P+L FL LG ++CL SPF+* Sbjct: 577 LISWLEFLYIDSLIIPALRSFLVYLGAVVCLVSPFL* 467 Score = 27.6 bits (54), Expect(3) = 2e-13 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -3 / -3 Query: 1127 IAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 IAQ A CSSS *TI YGD+ MG Sbjct: 404 IAQYARCSSSSRSR*VFL*TI*YGDIAMG 318
>LOC_Os12g18390:12012.t01689:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 1110 Score = 183 bits (395), Expect(3) = 4e-55 Identities = 70/158 (44%), Positives = 101/158 (63%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ Q+GF+WPT+ D ++FV C Q+ G IT MP+ Y+L +K Sbjct: 631 YGGHYGAFRTHAKIWQNGFFWPTMCDDTKEFVRRCTRYQKHGGITAWDTMPLTYNLQVKL 810 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D++GPFP S ++L+AVDYV+KWVE +P + + + +M +IFP FG P Sbjct: 811 FDVWGIDFIGPFPKSYDCEYILMAVDYVSKWVEGMPCRATEAKHACRMFHEIIFPCFGTP 990 Query: 802 RYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSS 915 R +++D GSHFI FR L + H + +PYHPQ+S Sbjct: 991 RMVISDGGSHFIDKTFRNFLQELRAQHNIPTPYHPQTS 1104 Score = 41.4 bits (84), Expect(3) = 4e-55 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ + R + WD P+LYK DG++RR ++G Sbjct: 482 ENKKRLIYKSRRHLWDAPYLYKVCSDGLLRRCVPVDEG 595 Score = 30.9 bits (61), Expect(3) = 4e-55 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ + S PWYA N +VA ++PP Sbjct: 404 LLKVTDSDPWYAIIINSMVAGHVPP 478 Score = 73.9 bits (155), Expect = 5e-12 Identities = 50/136 (36%), Positives = 61/136 (44%) Frame = -3 / -2 Query: 851 RKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VY 672 RK MK +P S+I G P G + +I S L GI STH T*STA + Sbjct: 1040 RKVLSMK*DPPSLITIRGVPKQGKIISWNIRQACLASVALHGIPSTHFDT*STAIRIYSQ 861 Query: 671 PLELGNGPI*SKPETSNGLMTSE*FIGIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KP 492 + G GP+ S P TSN L GI + VI P W+ +TN S VGQ P Sbjct: 860 S*DFGKGPMKSMPHTSNSLTCRLYVSGIVSQAVIPPCFWYLVHLRTNSFVSSHIVGQKNP 681 Query: 491 DCNTLWAVLSPAWYPP 444 C VL+ PP Sbjct: 680 FCQIFACVLNAP**PP 633
>LOC_Os02g23825:12002.t02076:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 645 Score = 176 bits (378), Expect(3) = 3e-54 Identities = 67/140 (47%), Positives = 94/140 (67%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ Q+ F+WPT+++D+++FV C QR G I MP+ Y+L ++ Sbjct: 223 YGGHYGAFRTQAKIWQNDFFWPTMYEDSKEFVRRCTSWQRQGGIAAHDAMPLTYNLQVEI 402 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S + ++LVAVDYV+KW EA+P AD + KM +IFPRFG P Sbjct: 403 FDVWGIDFMGPFPKSRNFEYILVAVDYVSKWAEAMPCSAADAKHANKMFTEIIFPRFGTP 582 Query: 802 RYLMTDDGSHFIHGVFRKML 861 R +++D GSHFI FR +L Sbjct: 583 RMVISDGGSHFIDKTFRDLL 642 Score = 40.0 bits (81), Expect(3) = 3e-54 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PWYA+ NY+V+KYIPP ++ K Sbjct: 16 SNPWYANIVNYMVSKYIPPGENQRKLK 96 Score = 36.8 bits (74), Expect(3) = 3e-54 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ R + WD+ +LY+ DG++RR ++G Sbjct: 76 ENQRKLKYESRRHIWDETYLYRVCSDGLLRRCVPTDEG 189 Score = 75.8 bits (159), Expect(2) = 5e-15 Identities = 40/77 (51%), Positives = 50/77 (64%) Frame = -3 / -2 Query: 851 RKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VY 672 RK +K EP S++ LG PNLG M ++IL+ + SA L GIAS HL T*STAT+ Sbjct: 632 RKVLSIK*EPPSLMTILGVPNLGKMISVNILLACFASAALHGIASAHLET*STATRMYSK 453 Query: 671 PLELGNGPI*SKPETSN 621 +LG GPI S P+TSN Sbjct: 452 LRDLGKGPIKSIPQTSN 402 Score = 30.9 bits (61), Expect(2) = 5e-15 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY ++ +GIPR Sbjct: 69 WYVLGYHVIHYVGIPR 22 Score = 49.2 bits (101), Expect(2) = 9e-07 Identities = 27/95 (28%), Positives = 50/95 (52%) Frame = -2 / -1 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVS 676 ++E +N+V T +++ R +KSWE D +HL G + I + SL PL D++ + +V Sbjct: 636 VSEGFVNKVRTSVTYDHPRGTKSWEDDFREHLIGMLRICGTARHSLSPLGDIVDCHQNVL 457 Query: 675 VPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSD 571 RE SH + +I++ + + + H + D Sbjct: 456 EVARLRERSHKVYTPNIEYLDLQIVCEGHCIMSGD 352 Score = 29.5 bits (58), Expect(2) = 9e-07 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / -2 Query: 285 GGMYLATI*FA*SAYHG 235 GGMYL T+*F AYHG Sbjct: 71 GGMYLDTM*FTMLAYHG 21
>LOC_Os08g23620:12008.t02134:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5985 Score = 206 bits (444), Expect = 6e-52 Identities = 83/153 (54%), Positives = 105/153 (68%) Frame = +1 / +1 Query: 589 MPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 MP+ Y+L ++ FDV G D+MGPFP S ++LVAVDYV+KWVEA+P AD + KM Sbjct: 1 MPLTYNLQVEIFDVWGIDFMGPFPKSCNCEYILVAVDYVSKWVEAMPCSAADARHAKKMF 180 Query: 769 K*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIK 948 +IFPRFG PR +++D GSHFI FR +L + H VA+PYHPQ+SGQ E SN+ IK Sbjct: 181 TEIIFPRFGTPRMVISDGGSHFIDKTFRDLLREMGAKHNVATPYHPQTSGQAETSNKHIK 360 Query: 949 LILQKIVNRSRKNWSSKLDDALWAYGTAYKNPM 1047 I+QK VN+ W L DALWAY TAYK P+ Sbjct: 361 NIMQKTVNKMGIGWKDILPDALWAYRTAYKTPL 459 Score = 90.9 bits (192), Expect = 4e-17 Identities = 56/118 (47%), Positives = 66/118 (55%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FC S *PL G *G ATL L RK MK EP S++ LG Sbjct: 386 LLTVFCIMFLICLFDVSA*PLVCGW*GVATLCLAPISRRRSRKVLSMK*EPPSLMTILGV 207 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + SA L GIASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 206 PNLGKMISVNIFLACLASAALHGIASTHLET*STATRMYSQLQDLGKGPMKSIPQTSN 33 Score = 65.2 bits (136), Expect = 2e-09 Identities = 40/141 (28%), Positives = 71/141 (50%) Frame = -2 / -1 Query: 1011 CIVKFARPILSRSIDDLL*DQFDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNE 832 C+ ++ P S +D LL + FD+ + LTT L M+R + + S ++E +NE Sbjct: 423 CVRQYILPSYSHFVDRLLHNVFDMFV*CFCLTTGLWMVRCGHIVFGSHFS*EVSEGFVNE 244 Query: 831 V*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREW 652 + T +++ +KSWE D +HL G I + SL PL D++ + +V RE Sbjct: 243 MRTSVTYDHPGGTKSWEDDFCEHLLGMPRIRSTARHSLNPLGDIVDCHQNVLAVARLRER 64 Query: 651 SHIIKARDIKWFNDK*IVHRH 589 SH + +I++ + + + H Sbjct: 63 SHEVYTPNIEYLDLQIVCEGH 1
>LOC_Os07g25870:12007.t02283:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 575 Score = 184 bits (397), Expect(2) = 6e-51 Identities = 69/117 (58%), Positives = 89/117 (76%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 K W +KL DALWAY TAYK P+GMSPY++VYGK C+ P+ELEH+A+WAI+ N D K AG Sbjct: 7 KAWKNKLPDALWAYRTAYKMPIGMSPYQLVYGKTCHLPVELEHRAHWAIQTWNKDLKGAG 186 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLLYNSRLRFF 1332 + S L+EWR +AY NAK++K++ KRWHDKRI +EF GD VLL+NSR++ F Sbjct: 187 QYKKMQPSELEEWRDKAYHNAKIYKDRTKRWHDKRINHKEFKAGDKVLLFNSRVKLF 357 Score = 38.6 bits (78), Expect(2) = 6e-51 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGN 1425 F G+L SKW GPY + GA+ + + EGN Sbjct: 355 FRHGKLRSKWMGPYTVVNASSHGAVTLRDNEGN 453 Score = 50.1 bits (103), Expect(2) = 1e-13 Identities = 27/48 (56%), Positives = 30/48 (62%) Frame = -3 / -1 Query: 1331 KNLKRELYNRT*SPTLNSRFCIRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 K+ REL + T SP LNS IRLSCHLL SL LA A LHSS+ Sbjct: 356 KSFTRELNSSTLSPALNSL*LIRLSCHLLVLSLYILALW*ALSLHSSS 213 Score = 48.3 bits (99), Expect(2) = 1e-13 Identities = 22/42 (52%), Positives = 26/42 (61%) Frame = -3 / -1 Query: 1166 FSPAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 + PA IAQ ALCS+S G+*Q P*T YGD+PMG Sbjct: 191 YCPAPFKSLFHVWIAQCALCSNSTGR*QVFP*TSWYGDIPMG 66 Score = 57.4 bits (119), Expect = 4e-07 Identities = 34/108 (31%), Positives = 50/108 (46%) Frame = -2 / -3 Query: 1305 QDIITYIELSFLYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFD 1126 Q ++ EL + SF++PS L LGI++ L PF + +L+ I V D Sbjct: 330 QHLVPCFELLVIDSFIMPSFGSVLIYLGIVVGLVPPFFQLRGLHLLVLSSSL*ILVPCLD 151 Query: 1125 CPISFVFQLKREITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPIL 982 P+ VFQL ++T L ++ + *H G L CI F P L Sbjct: 150 SPVRPVFQLYWKVTSLPVDKLVW*HTDGHLISSPICPKCIG*FVLPCL 7 Score = 47.8 bits (98), Expect = 3e-04 Identities = 24/55 (43%), Positives = 27/55 (49%) Frame = +2 / +2 Query: 983 RIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSSTLI 1147 R G N MH+G +GLLIR P CH R V SWNT G S+ T I Sbjct: 8 RHGRTNYPMHFGHIGLLIRCPSVCHHTNLSTGRLVTFQ*SWNTGRTGLSRHGTRI 172 Score = 41.8 bits (85), Expect = 0.021 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +3 / +3 Query: 996 QT*RCTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 QT RCT+G+ DCL*++H +VT+ L L S GTQ LG Sbjct: 21 QTTRCTLGI*DCL*DAHRYVTIPTCLREDLSPSSRVGTQGALG 149 Score = 41.8 bits (85), Expect = 0.021 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -1 / -2 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ CVP ++ + VT W SYKQS+ P VHR VC Sbjct: 148 PSAPCVPTLLEGDKSSRRQVGMVTYRWASYKQSYMPKVHRVVC 20
>LOC_Os01g23330:12001.t02060:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6502 Score = 168 bits (361), Expect(3) = 1e-50 Identities = 64/122 (52%), Positives = 85/122 (69%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+++D+R+FV C CQR G IT R MP+ Y+L ++ Sbjct: 6131 YGGHYGAFRTQAKIWQSGFFWPTMYEDSREFVRRCTSCQRQGEITARDAMPLTYNLQVEI 6310 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVP 801 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P AD + KM +IFPRFG P Sbjct: 6311 FDVWGIDFMGPFPKSRSCEYILVAVDYVSKWVEAMPCSAADARHAKKMFTEIIFPRFGTP 6490 Query: 802 RY 807 + Sbjct: 6491 EW 6496 Score = 36.3 bits (73), Expect(3) = 1e-50 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +2 Query: 230 SAPWYADYANYIVAKYIP 283 S PWYA+ NY+V+KYIP Sbjct: 5924 SNPWYANIVNYMVSKYIP 5977 Score = 35.9 bits (72), Expect(3) = 1e-50 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 / +2 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ R + WD+P+LY+ +G++RR E+G Sbjct: 5996 KLKYESRCHIWDEPYLYRVYSNGLLRRCVPTEEG 6097 Score = 62.9 bits (131), Expect(3) = 8e-14 Identities = 32/60 (53%), Positives = 39/60 (65%) Frame = -3 / -2 Query: 800 GTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 G PNLG M ++I + SA L GIASTHL T*STAT+ +LG GP+ S P+TSN Sbjct: 6489 GVPNLGKMISVNIFLACLASAALHGIASTHLET*STATRMYSQLRDLGKGPMKSIPQTSN 6310 Score = 35.0 bits (70), Expect(3) = 8e-14 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + +PP* Sbjct: 6282 GIASRAVISPCLWQLVHLLTNSLESSYIVGQKKPLCQILAWVRNAP*WPP* 6130 Score = 31.3 bits (62), Expect(3) = 8e-14 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIPR Sbjct: 5977 WYVLGYHVVHYVGIPR 5930 Score = 49.2 bits (101), Expect(2) = 5e-05 Identities = 31/106 (29%), Positives = 49/106 (46%) Frame = -2 / -1 Query: 795 SKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWF 616 +KSWE D +HL G I + SL PL D++ + +V RE SH + +I++ Sbjct: 6484 TKSWEDDFCEHLLGMPRIRGAARHSLNPLGDIVDCHQNVLAATRLRERSHEVYTPNIEYL 6305 Query: 615 NDK*IVHRHFLTLSDIPYSLAFVTRQDKLTGILEESGPIET*LQYL 478 + + + H + SD LA D+ + + P ET L L Sbjct: 6304 DLQIVCEGHCIASSDFSLPLAAGASSDEFS*VFVHCWPKETTLPNL 6167 Score = 26.7 bits (52), Expect(2) = 5e-05 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -2 / -2 Query: 282 GMYLATI*FA*SAYHG 235 GMYL T+*F AYHG Sbjct: 5976 GMYLDTM*FTMLAYHG 5929 Score = 30.9 bits (61), Expect(2) = 0.96 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +3 / +1 Query: 477 QGIAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTI 656 Q +A FLLA++++ + + ++P+ R H + NA + I CLG L+GT Sbjct: 6166 QDLAKWFLLANNVRRLKRIRQKMHQLPEARRNHCSRCNAPHIQFASRDIRCLGYRLHGTF 6345 Query: 657 P 659 P Sbjct: 6346 P 6348 Score = 22.6 bits (43), Expect(2) = 0.96 Identities = 6/9 (66%), Positives = 8/9 (88%) Frame = +3 / +1 Query: 774 SHIPKIWSP 800 +H+PKIW P Sbjct: 6463 NHLPKIWYP 6489
>LOC_Os01g06700:12001.t00553:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6347 Score = 132 bits (283), Expect(4) = 2e-49 Identities = 52/150 (34%), Positives = 83/150 (55%) Frame = +1 / +3 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PSS G+ +L A DY +KW EA+P + I L+ I RFGVP + +D+ F Sbjct: 5520 PSSRGHRFILTATDYFSKWAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFK 5699 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 + + KY + ++ Y+PQ++G E N+ + IL+K V++ R++W +L +ALW Sbjct: 5700 SQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALW 5879 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLELE 1107 AY + P +PY +VYG PLE++ Sbjct: 5880 AYRVTVRTPTQATPYSLVYGNEAVLPLEIQ 5969 Score = 56.5 bits (117), Expect(4) = 2e-49 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +1 / +3 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 EV GG+ +G + H + G+YWP + D K +C CQ N + P++ Sbjct: 5280 EVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPAPLHP 5459 Query: 604 SLVIKPFDVSGFDYMG 651 ++ PFD G D +G Sbjct: 5460 TVPSWPFDAWGIDVIG 5507 Score = 42.3 bits (86), Expect(4) = 2e-49 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +1 / +3 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEGNFP 1431 G+ KWEGPYVIE+ Y GA ++ + +G+ P Sbjct: 6207 GKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQP 6302 Score = 23.1 bits (44), Expect(4) = 2e-49 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = +1 / +1 Query: 1153 LAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRW 1254 L ++ FD SL WR A K++ K W Sbjct: 6007 LKTNRFAFDFRSLMPWRKSA*APFKIWSCIAKTW 6108
>LOC_Os05g22680:12005.t01928:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 848 Score = 164 bits (352), Expect(3) = 5e-49 Identities = 59/97 (60%), Positives = 77/97 (79%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFDFKLAG 1161 K W +KL DALWAY TAYK P+GMSPY++VYGK C+FP+ELEH+A+WAI+ N D K AG Sbjct: 7 KAWKNKLLDALWAYRTAYKTPIGMSPYQLVYGKTCHFPVELEHRAHWAIRTWNMDLKGAG 186 Query: 1162 EKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQ 1272 + +S L+EWR +AY NAK++K++ KRWHDKRI+ Sbjct: 187 QHRKMQLSELEEWRDKAYHNAKIYKDRTKRWHDKRIK 297 Score = 37.7 bits (76), Expect(3) = 5e-49 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 / +1 Query: 1327 FFAGRLLSKWEGPYVIEEVYRSGAIKINNTEGNFPRV 1437 F G+L KW GPY + + GA+ + + EGN +V Sbjct: 352 FGHGKLQIKWMGPYTVVDASSHGAVTLRDNEGNIFKV 462 Score = 33.6 bits (67), Expect(3) = 5e-49 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 / +1 Query: 1273 KREFNVGDYVLLYNSRLRFF 1332 K EF VGD VLL+NSR + F Sbjct: 295 KHEFKVGDKVLLFNSRAKLF 354 Score = 50.6 bits (104), Expect(3) = 7e-12 Identities = 24/40 (60%), Positives = 25/40 (62%) Frame = -3 / -1 Query: 1160 PAXXXXXXXXLIAQ*ALCSSSRGK*QALP*TILYGDMPMG 1041 PA IAQ ALCS+S GK*Q P*T YGDMPMG Sbjct: 185 PAPFKSMFQVRIAQCALCSNSTGK*QVFP*TSWYGDMPMG 66 Score = 33.6 bits (67), Expect(3) = 7e-12 Identities = 17/27 (62%), Positives = 18/27 (66%) Frame = -3 / -1 Query: 1268 IRLSCHLLTFSLNNLAFSYAWVLHSSN 1188 IRLSCHLL SL LA A LHSS+ Sbjct: 293 IRLSCHLLVLSLYILALW*ALSLHSSS 213 Score = 24.9 bits (48), Expect(3) = 7e-12 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -3 / -1 Query: 1331 KNLKRELYNRT*SPTLNS 1278 K+ REL + T SPTLNS Sbjct: 353 KSFARELNSSTLSPTLNS 300 Score = 62.0 bits (129), Expect = 2e-08 Identities = 34/97 (35%), Positives = 49/97 (50%) Frame = -2 / -3 Query: 1272 LYSFVVPSLNLFLEQLGILICLGSPFI**ADIKQPLLTGKFEIKVELFDCPISFVFQLKR 1093 L SF++PS L LGI++ L PF ++ P+L+G I V D P+ +FQL Sbjct: 297 LDSFIMPSFGSVLIYLGIVVGLVPPFFQLRELHLPMLSGSL*IHVPSPDSPVRPMFQLYW 118 Query: 1092 EITGLTINHFIR*HAHGILXXXXXXX*CIVKFARPIL 982 ++T L ++ +R*HA G L CI P L Sbjct: 117 KVTSLPVDKLVR*HADGRLISSPICPKCIK*LVLPCL 7 Score = 58.8 bits (122), Expect = 2e-07 Identities = 38/100 (38%), Positives = 42/100 (42%) Frame = +2 / +2 Query: 983 RIGLANLTMHYGLMGLLIRIPWACHRIKWFMVRPVISLLSWNTKLIGQSKSSTLISNLPV 1162 R G + MH+G +GLLIR P ACHR R V SWN G S T I P Sbjct: 8 RHGRTSYLMHFGHIGLLIRRPSACHRTNLSTGRLVTFQ*SWNIGRTGLSGLGTWI*REPD 187 Query: 1163 RSGCLISAH*MNGEPRHMRMPSCSRKRLRDGTTNEYKNES 1282 G S NG R MP R +DG NE S Sbjct: 188 SIGRCNSLSWKNGGTRPTTMPRYIRTEPKDGMINESSTSS 307 Score = 41.4 bits (84), Expect = 0.029 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -1 / -2 Query: 1123 PNKLCVPAQEGNNRPYHKPFYTVTCPWDSYKQSHKPIVHRQVC 995 P+ VP +++ + TVTC W SYKQS+ P VH+ C Sbjct: 148 PSAPYVPTLLESDKSSRRQVGTVTCRWASYKQSYMPKVHQVAC 20 Score = 37.7 bits (76), Expect = 0.37 Identities = 19/39 (48%), Positives = 23/39 (58%) Frame = +3 / +3 Query: 1008 CTMGLWDCL*ESHGHVTV*NGLW*GLLFPS*AGTQSLLG 1124 CT+G+ DCL*++H HVTV L L S GT LG Sbjct: 33 CTLGI*DCL*DAHRHVTVPTCLREDLSLSSRVGT*GALG 149
>LOC_Os07g20830:12007.t01886:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3435 Score = 133 bits (284), Expect(4) = 8e-49 Identities = 51/108 (47%), Positives = 71/108 (65%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 Y G++ T K+ +SG +WPT+++D+++FV C CQR G IT R MP+ Y+L +K Sbjct: 3013 YDGHYGAFHTQAKIWKSGLFWPTMYEDSKEFVRRCTSCQRQG*ITARDAMPLTYNL*VKI 3192 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKM 765 FD G D+MGPFP S ++LVAVDYV+KWVEA+P D + KM Sbjct: 3193 FDFWGIDFMGPFPKSRNCEYILVAVDYVSKWVEAMPCSATDARHAKKM 3336 Score = 47.3 bits (97), Expect(4) = 8e-49 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKML 861 IFPRFG PR +++D+GSHFI FR +L Sbjct: 3346 IFPRFGTPRIVISDEGSHFIDKTFRDLL 3429 Score = 36.3 bits (73), Expect(4) = 8e-49 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 / +1 Query: 230 SAPWYADYANYIVAKYIP 283 S PWYA+ NY+V+KYIP Sbjct: 2806 SNPWYANIVNYMVSKYIP 2859 Score = 35.9 bits (72), Expect(4) = 8e-49 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +2 / +1 Query: 311 KFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 K ++ R WD+P+LY+ DG++RR ++G Sbjct: 2878 KLKYESRRRIWDEPYLYRVYSDGLLRRCVPIDEG 2979 Score = 62.5 bits (130), Expect(3) = 1e-13 Identities = 40/84 (47%), Positives = 45/84 (53%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSNGLMTSE*FIGIS*RLVIFP 564 S L GIASTHL T*STAT+ +LG GPI S P+ SN L GI+ R VI P Sbjct: 3314 SVALHGIASTHLET*STATRMYSQLRDLGKGPIKSIPQKSNILTYKLYVRGIASRAVIHP 3135 Query: 563 ILWHSSQDKTNLRASLKRVGQ*KP 492 LW TN S VGQ +P Sbjct: 3134 CLWQLVHLLTNSFESSYIVGQKRP 3063 Score = 32.2 bits (64), Expect(3) = 1e-13 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 / -2 Query: 851 RKTP*MKCEPSSVIKYLGTPNLGNMT 774 RK MK EPSS++ LG PNLG ++ Sbjct: 3419 RKVLSMK*EPSSLMTILGVPNLGKIS 3342 Score = 31.8 bits (63), Expect(3) = 1e-13 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 283 WYVFGYDIVCIIGIPR 236 WYV GY +V +GIPR Sbjct: 2859 WYVLGYHVVYYVGIPR 2812
>LOC_Os04g06330:12004.t00511:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 480 Score = 192 bits (413), Expect = 1e-47 Identities = 77/155 (49%), Positives = 105/155 (67%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D++ FV C QR G IT R MP+ Y+L ++ FDV G D+MGPFP S ++LV Sbjct: 1 MYEDSKAFVRRCTSWQRQGGITARDAMPLTYNLQVEIFDVWGIDFMGPFPKSRNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+KWVEA+P AD + KM +I PRFG PR +++D GSHFI FR +L Sbjct: 181 AVDYVSKWVEAMPCSTADAKHAKKMFIEIILPRFGTPRMVISDGGSHFIDKTFRDLLQDM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIKLILQKIVNR 975 H VA+PY+PQ+SGQ E SN+++K I+QK VN+ Sbjct: 361 GAKHNVATPYYPQTSGQAETSNKQMKNIVQKTVNK 465 Score = 98.2 bits (208), Expect = 2e-19 Identities = 58/118 (49%), Positives = 68/118 (57%) Frame = -3 / -2 Query: 974 LLTIFCRXXXXXXXXXST*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGT 795 LLT+FC S *PL G**G ATL L RK MK EP S++ LG Sbjct: 464 LLTVFCTIFFICLFDVSA*PLVCG**GVATLCLAPMSCRRSRKVLSMK*EPPSLMTILGV 285 Query: 794 PNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 PNLG M ++I + + SA L GIASTHL T*STAT+ +LG GPI S P+TSN Sbjct: 284 PNLGRMISMNIFLACFASAVLHGIASTHLET*STATRIYSQLRDLGKGPIKSIPQTSN 111 Score = 60.2 bits (125), Expect = 6e-08 Identities = 29/95 (30%), Positives = 55/95 (57%) Frame = -2 / -1 Query: 855 LAENTMNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVIHSN*DVS 676 ++E ++EV T +++ R +KSWE D ++HL G + I + SL PL D++ +*++ Sbjct: 345 VSEGFVDEVRTSVTYDHPRGTKSWEDDFYEHLLGMLRIRGAAWHSLNPLGDIVDCH*NIL 166 Query: 675 VPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSD 571 G RE SH + +I++ + + + H +T S+ Sbjct: 165 AVAGLRERSHKVYTPNIEYLDLQVVCEGHCITSSN 61 Score = 27.6 bits (54), Expect(2) = 9.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 / +3 Query: 774 SHIPKIWSP*IFDD**RFTLHSWCFPQ 854 +H PKIW P* * RF+LH P+ Sbjct: 264 NHPPKIWYP*DGHK*RRFSLHRQNLPR 344 Score = 22.6 bits (43), Expect(2) = 9.2 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = +3 / +3 Query: 627 CLGL*LYGTIP 659 CLG LYGT P Sbjct: 117 CLGYRLYGTFP 149
>LOC_Os05g24730:12005.t02130:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5915 Score = 60.6 bits (126), Expect(6) = 9e-47 Identities = 27/77 (35%), Positives = 34/77 (44%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG + AG K + GF+WPT KDA V C+ Q TK + + P Sbjct: 4881 YGSHAAGQTLIGKAFRQGFFWPTALKDACDMVQRCEAYQFHSKHTKLPAQALQTIPLTWP 5060 Query: 622 FDVSGFDYMGPFPSSNG 672 F G D +GPFP G Sbjct: 5061 FSC*GLDILGPFPRGQG 5111 Score = 54.7 bits (113), Expect(6) = 9e-47 Identities = 25/53 (47%), Positives = 33/53 (62%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HPQS+GQVE +N Sbjct: 5217 IFCRFGLPHRIITDNGSQFISADFQDYCIRLRVQI*FASVSHPQSNGQVERAN 5375 Score = 47.3 bits (97), Expect(6) = 9e-47 Identities = 17/43 (39%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRIQ R ++GDYVL Sbjct: 5619 DVNLLEEHRERVAVRAASYQQALRRYHEKRIQARTLSIGDYVL 5747 Score = 40.5 bits (82), Expect(6) = 9e-47 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT + +IK +K Sbjct: 5112 GYRFLFVAIDKFTKWIEATPTGEIKANNAIKFIK 5213 Score = 40.0 bits (81), Expect(6) = 9e-47 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGN 1425 +L KWEGPY I +V R GA KI + +G+ Sbjct: 5778 KLSPKWEGPYTITQVLRPGAFKIADGDGH 5864 Score = 36.8 bits (74), Expect(6) = 9e-47 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5433 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAILPTEL*HQS 5567 Score = 27.2 bits (53), Expect(2) = 7.5 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A T L K+ M EP SV+ G PNL N+ ++++ Sbjct: 5362 TCPLL*G*ETEANQIWTLSLMQ*SWKSALMNWEPLSVMIRWGNPNLQNIPLMNLM 5198 Score = 23.1 bits (44), Expect(2) = 7.5 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 731 VGIASTHLVT*STAT 687 VG+AS HLV S AT Sbjct: 5173 VGVASIHLVNLSIAT 5129
>LOC_Os03g25590:12003.t02257:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6195 Score = 58.3 bits (121), Expect(6) = 5e-45 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 5164 GSHAADRTLVGKAFRQGFFWPTALKDACDMV*RCEACQFHSKHTKLPAQALQTIPLTWPF 5343 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5344 SCWGLDILGPFPRGQG 5391 Score = 51.5 bits (106), Expect(6) = 5e-45 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+ S FI F+ + V AS HPQS+GQVE +N Sbjct: 5497 IFCRYGLPHCIITDNSSQFISADFQDYYIRLGVKICFASVSHPQSNGQVERAN 5655 Score = 43.2 bits (88), Expect(6) = 5e-45 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT+ +IK +K Sbjct: 5392 GYRFLFVAIDKFTKWIEAVPTREIKADNAIKFIK 5493 Score = 42.8 bits (87), Expect(6) = 5e-45 Identities = 15/42 (35%), Positives = 29/42 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYV Sbjct: 5899 DVNLLEEHRERVAVRAASYQQTLRRYHEKRIRARILSIGDYV 6024 Score = 40.0 bits (81), Expect(6) = 5e-45 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6058 KLTPKWEGPYTITQVLRPGAFKIADGDG 6141 Score = 38.2 bits (77), Expect(6) = 5e-45 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL+H++ Sbjct: 5713 KRWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPGELQHQS 5847
>LOC_Os08g16270:12008.t01501:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3333 Score = 128 bits (275), Expect(5) = 6e-45 Identities = 55/158 (34%), Positives = 87/158 (55%) Frame = +1 / +2 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G+ VLVA DY TKW EA+P KN H I + I RFG+P+ L TD G+ F+ Sbjct: 938 SSKGHRFVLVATDYFTKWAEAVPLKNMTHTEVIDFILKHIIHRFGIPQTLTTDQGASFMC 1117 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 + Y + +SPY+ Q++GQ E SN+ + I++K + K W L +ALWA Sbjct: 1118 KKVKNFAESYGIKLLSSSPYYAQANGQAESSNKTLLKIVKKNIEEYPKRWHEVLSEALWA 1297 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 + + ++P++++YG+ P+E+ + IK+ Sbjct: 1298 HRISKHGATKVTPFELIYGQEAVLPVEVNLGSLRYIKQ 1411 Score = 45.1 bits (92), Expect(5) = 6e-45 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 / +1 Query: 487 QSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 ++GFYWP + D K+ C+ CQR GN+ +N + PF Sbjct: 757 RAGFYWPKMIDDCFKYYRGCEACQRFGNVQLAPAAVLNPIIKPWPF 894 Score = 31.3 bits (62), Expect(5) = 6e-45 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +1 / +2 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A+E + K++V + ++KR++ + F VGD V Sbjct: 1478 RLKAFEEIEKEKKRVAKAYNKRVKAKLFQVGDLV 1579 Score = 25.8 bits (50), Expect(5) = 6e-45 Identities = 10/42 (23%), Positives = 21/42 (50%) Frame = +2 / +1 Query: 293 TYQQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQI 418 T + +K + Y D LY+ +DGV+ + + +Q ++ Sbjct: 559 TLKVDRKIWRQAFKYTLLDEDLYRRNIDGVLLKCLDEDQSKV 684 Score = 25.8 bits (50), Expect(5) = 6e-45 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = +1 / +2 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 G+ WEGPY + + R A + +G Sbjct: 1622 GKWSPSWEGPYRVCGIVRGNAFFLETLQG 1708
>LOC_Os02g49390:12002.t04523:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6227 Score = 62.0 bits (129), Expect(6) = 7e-45 Identities = 27/77 (35%), Positives = 34/77 (44%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG + A K + GF+WPT KDA V C+ CQ TK + + P Sbjct: 5226 YGSHAASRTLVGKSFRQGFFWPTALKDACDMVQRCEACQFQSKHTKLPAQALQTIPLTWP 5405 Query: 622 FDVSGFDYMGPFPSSNG 672 F G D +GPFP G Sbjct: 5406 FSCWGLDILGPFPRGQG 5456 Score = 52.4 bits (108), Expect(6) = 7e-45 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5562 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5720 Score = 43.7 bits (89), Expect(6) = 7e-45 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L++ R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5964 DVNLLEKHRERVVVRAASYQQSLRRYHEKRIRARILSIGDYVL 6092 Score = 41.8 bits (85), Expect(6) = 7e-45 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V RSGA KI + +G Sbjct: 6123 KLSPKWEGPYTITQVLRSGAFKIADGDG 6206 Score = 37.3 bits (75), Expect(6) = 7e-45 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5778 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPGELRHQS 5912 Score = 36.3 bits (73), Expect(6) = 7e-45 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKML 768 GY + VA+D TKW+EA+P +IK + Sbjct: 5457 GYRFLFVAIDKFTKWIEAVPMGEIKADNAIKFI 5555 Score = 33.1 bits (66), Expect = 8.8 Identities = 16/28 (57%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS IL AP+R T I *GPSH SL Sbjct: 6205 PSPSAILNAPDRKTCVIV*GPSHFGESL 6122
>LOC_Os08g08390:12008.t00725:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5147 Score = 64.3 bits (134), Expect(6) = 7e-45 Identities = 28/77 (36%), Positives = 34/77 (44%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG + AG K + GF+WPT KDA V C CQ TK + + P Sbjct: 4113 YGSHAAGRTLVGKAFRQGFFWPTALKDACDIVQRCKACQFHSKHTKLPAQALQSVPLTWP 4292 Query: 622 FDVSGFDYMGPFPSSNG 672 F G D +GPFP G Sbjct: 4293 FSCWGLDILGPFPRGQG 4343 Score = 50.1 bits (103), Expect(6) = 7e-45 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ + V AS HP S+GQVE +N Sbjct: 4449 IFCRYGLPHRIITDNGSQFISADFQDYCIRLGVKICFASVSHP*SNGQVERAN 4607 Score = 44.1 bits (90), Expect(6) = 7e-45 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDY+L Sbjct: 4851 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARILSIGDYIL 4979 Score = 40.5 bits (82), Expect(6) = 7e-45 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY VA+D TKW+EAIPT +IK +K Sbjct: 4344 GYRFQFVAIDKFTKWIEAIPTGEIKADNAIKFIK 4445 Score = 39.6 bits (80), Expect(6) = 7e-45 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 5010 KLSPKWEGPYTITQVLRPGAFKIADGDG 5093 Score = 35.0 bits (70), Expect(6) = 7e-45 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL +++ Sbjct: 4665 KKWVEELPSVLWAVCTTPTTSNKETPFFLVYGSEAMLPSELRYQS 4799 Score = 33.1 bits (66), Expect(2) = 0.82 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS IL AP R T I *GPSHL SL Sbjct: 5092 PSPSAILNAPGRKTCVIV*GPSHLGESL 5009 Score = 27.6 bits (54), Expect(2) = 0.82 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ M EP SV+ G+P L N+ ++++ Sbjct: 4594 TCPLL*G*ETEAKHILTPSLMQ*SWKSALMNWEPLSVMMRCGSPYLQNIPLMNLM 4430
>LOC_Os01g35800:12001.t03132:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2619 Score = 60.6 bits (126), Expect(6) = 1e-44 Identities = 25/65 (38%), Positives = 32/65 (49%) Frame = +1 / +1 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPF 657 K + GF+WPT KDA + V C+ CQ TK + +I PF G D +GPF Sbjct: 1516 KAFR*GFFWPTALKDACEIVQRCEACQFFSKHTKLPAQALQTIPLIWPFSCWGLDILGPF 1695 Query: 658 PSSNG 672 P G Sbjct: 1696 PRGQG 1710 Score = 55.6 bits (115), Expect(6) = 1e-44 Identities = 24/54 (44%), Positives = 34/54 (62%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNR 939 IF R+G+P ++TD+GS F G F+ + V AS HPQS+GQV+ +NR Sbjct: 1816 IFCRYGLPHRILTDNGSQFTSGDFQDYCIELGVKILFASVSHPQSNGQVKRANR 1977 Score = 42.8 bits (87), Expect(6) = 1e-44 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 2218 DVNLLEEHHERVAVRAAAYQQALRRYHEKRIRARILSIGDYVL 2346 Score = 39.1 bits (79), Expect(6) = 1e-44 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT+ +IK ++ Sbjct: 1711 GYKFMFVAIDKFTKWIEAEPTREIKADNAIKFIR 1812 Score = 38.6 bits (78), Expect(6) = 1e-44 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2032 KKWVEELPSVLWAVQTTPTTSNKETPFFLVYGSEAMLPTELRHQS 2166 Score = 35.9 bits (72), Expect(6) = 1e-44 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY + R GA KI + +G Sbjct: 2377 KLSPKWEGPYTVVRALRPGAFKIADGDG 2460
>LOC_Os05g19090:12005.t01675:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2757 Score = 85.8 bits (181), Expect(5) = 1e-44 Identities = 39/109 (35%), Positives = 51/109 (46%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V + CQ TK + + PF Sbjct: 1729 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQQYEACQFHNKHTKLPVQALQTIPLTWPF 1908 Query: 625 DVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 G D + PFP GY + VA+D TKW+EA PT +IK +K Sbjct: 1909 SCWGLDILRPFPRG*GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 2055 Score = 47.8 bits (98), Expect(5) = 1e-44 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF FG+P ++TD+GS FI F+ + V AS HPQS+G VE +N Sbjct: 2059 IFCIFGLPHRIITDNGSQFISADFQDYYIRLGVKICFASVSHPQSNG*VERAN 2217 Score = 45.5 bits (93), Expect(5) = 1e-44 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 2461 DVNLLEEHRERVAVGAASYQQALRRYHEKRIRARTLSIGDYVL 2589 Score = 39.6 bits (80), Expect(5) = 1e-44 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 2620 KLSPKWEGPYTITQVLRPGAFKIADGDG 2703 Score = 36.8 bits (74), Expect(5) = 1e-44 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P +L H++ Sbjct: 2275 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTKLRHQS 2409 Score = 35.4 bits (71), Expect(2) = 0.005 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = -3 / -2 Query: 731 VGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSNG 618 VG+AS HLV S AT + P GNG S P+ NG Sbjct: 2015 VGVASIHLVNLSIATNRNL*PYPRGNGLSMSSPQHENG 1902 Score = 26.3 bits (51), Expect(2) = 0.005 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ M EP SV+ G PN+ N+ ++++ Sbjct: 2204 TYPLL*G*ETEAKQILTPSLM**SWKSALMNWEPLSVMIR*GNPNMQNIPLMNLM 2040
>LOC_Os08g32030:12008.t02948:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2934 Score = 56.5 bits (117), Expect(7) = 2e-44 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI+ F+ + V AS HPQS+GQVE +N Sbjct: 2236 IFCRFGLPHRIITDNGSQFINADFQDYCIRLGVKICFASVSHPQSNGQVERAN 2394 Score = 46.0 bits (94), Expect(7) = 2e-44 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 2638 DVNLLEEHRERVVVRAASYQQALRRYHEKRIRARTLSIGDYVL 2766 Score = 41.4 bits (84), Expect(7) = 2e-44 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDEC 555 G + AG K + GF+WPT KDA V C+ C Sbjct: 1903 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEAC 2013 Score = 40.0 bits (81), Expect(7) = 2e-44 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 2797 KLSPKWEGPYTITQVLRPGAFKIADCDG 2880 Score = 39.6 bits (80), Expect(7) = 2e-44 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 2131 GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 2232 Score = 38.2 bits (77), Expect(7) = 2e-44 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2452 KKWVEELPSLLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 2586 Score = 27.2 bits (53), Expect(7) = 2e-44 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +1 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 2077 PFSCWGLDILGPFPRGQG 2130 Score = 29.9 bits (59), Expect(2) = 1.4 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ M EP SV+ G PNL N+ ++++ Sbjct: 2381 TCPLL*G*ETEAKQILTPSLMQ*SWKSALMNWEPLSVMIRWGNPNLQNIPLMNLM 2217 Score = 23.1 bits (44), Expect(2) = 1.4 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 731 VGIASTHLVT*STAT 687 VG+AS HLV S AT Sbjct: 2192 VGVASIHLVNLSIAT 2148
>LOC_Os06g03310:12006.t00224:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4522 Score = 57.4 bits (119), Expect(6) = 2e-44 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 2092 GPHAAGRTLVGKAFRHGFFWPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 2271 Query: 625 DVSGFDYMGPFPSSNG 672 G D + PFP G Sbjct: 2272 SCWGLDILRPFPRGQG 2319 Score = 52.4 bits (108), Expect(6) = 2e-44 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2425 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 2583 Score = 45.1 bits (92), Expect(6) = 2e-44 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 2827 DVNLLEEHRERVAVRAAAYQQALRRYHEKRIRARILSIGDYVL 2955 Score = 40.9 bits (83), Expect(6) = 2e-44 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK +K Sbjct: 2320 GYKFLFVAIDKFTKWIEAVPTGEIKAANTIKFIK 2421 Score = 39.6 bits (80), Expect(6) = 2e-44 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 2986 KLSPKWEGPYTITQVLRPGAFKIADGDG 3069 Score = 36.3 bits (73), Expect(6) = 2e-44 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIK 1131 W +L LWA T +P+ +VYG P EL H++ A K Sbjct: 2647 WVEELPSVLWAIRTTPTTSNKETPFFLVYGSEAMLPSELRHQSTRAQK 2790
>LOC_Os03g36220:12003.t03094:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4551 Score = 137 bits (294), Expect(2) = 3e-44 Identities = 54/150 (36%), Positives = 84/150 (56%) Frame = +1 / +1 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PSS G+ + DY +KW EA+ + I L+ I RFGVP + +D+G F Sbjct: 3934 PSSRGHRFIFAITDYFSKWAEAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFK 4113 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 ++ +AKY + ++ Y+PQ++G +E N+ + IL+K+VNR R++W L +ALW Sbjct: 4114 SHKMQRFIAKYKIRWNYSTGYYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALW 4293 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLELE 1107 AY + P +PY +VYG PLE+E Sbjct: 4294 AYRVTVRTPTQCTPYSLVYGSEAVLPLEVE 4383 Score = 63.4 bits (132), Expect(2) = 3e-44 Identities = 25/86 (29%), Positives = 41/86 (47%) Frame = +1 / +1 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 EV GG+ +G + H + +G+YWP + D K SC CQ G+ +P++ Sbjct: 3694 EVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLKVAKSCHGCQIHGDFKHLPPVPLHP 3873 Query: 604 SLVIKPFDVSGFDYMGPFPSSNGYTH 681 ++ PF+ G D +GP + H Sbjct: 3874 TVPAWPFEAWGIDVIGPIDPPSSRGH 3951
>LOC_Os02g22040:12002.t01992:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4764 Score = 61.1 bits (127), Expect(6) = 4e-44 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 3766 GSHAAGRTLVVKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLLAQALQTIPLT*PF 3945 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 3946 SCWGLDILGPFPRGQG 3993 Score = 49.6 bits (102), Expect(6) = 4e-44 Identities = 24/53 (45%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RF +P ++TD+GS FI F + V AS HPQS+GQVE +N Sbjct: 4099 IFCRFRLPHRIITDNGSQFISADF*DYCIRLGVKICFASVSHPQSNGQVERAN 4257 Score = 46.0 bits (94), Expect(6) = 4e-44 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 4501 DVNLLEEHRERVVVRAASYQQALRRYHEKRIRARTLSIGDYVL 4629 Score = 41.4 bits (84), Expect(6) = 4e-44 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY +LVA+D TKW+EA PT +IK +K Sbjct: 3994 GYRFLLVAIDKFTKWIEATPTGEIKADNAIKFIK 4095 Score = 36.8 bits (74), Expect(6) = 4e-44 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LW T +P+ +VYG P EL H++ Sbjct: 4315 KKWVEELPSVLWTVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 4449 Score = 35.9 bits (72), Expect(6) = 4e-44 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R A KI + +G Sbjct: 4660 KLSPKWEGPYKITQVLRPDAFKIADDDG 4743
>LOC_Os03g14760:12003.t01262:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2934 Score = 62.9 bits (131), Expect(6) = 8e-44 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 1903 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCESCQFHSKHTKLPTQALQTIPLTWPF 2082 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 2083 SCWGLDILGPFPRGQG 2130 Score = 48.3 bits (99), Expect(6) = 8e-44 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF +G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2236 IFCGYGLPYRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 2394 Score = 44.6 bits (91), Expect(6) = 8e-44 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 2638 DVNLLEEHRERVAVRAASYQQTLRRYHEKRIRARILSIGDYVL 2766 Score = 39.6 bits (80), Expect(6) = 8e-44 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 2797 KLSPKWEGPYTITQVLRPGAFKIADGDG 2880 Score = 38.6 bits (78), Expect(6) = 8e-44 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 673 YTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 Y + VA+D TKW+EA+PT +IK +K Sbjct: 2134 YRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIK 2232 Score = 35.9 bits (72), Expect(6) = 8e-44 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +V+G P EL+H++ Sbjct: 2452 KRWVEELPSVLWAVRTTPTTSNKETPFFLVHGSKAMLPGELQHQS 2586 Score = 33.1 bits (66), Expect = 8.8 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS IL AP R T I *GPSHL SL Sbjct: 2879 PSPSAILNAPGRKTCVIV*GPSHLGESL 2796
>LOC_Os07g20380:12007.t01842:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 486 Score = 179 bits (385), Expect = 9e-44 Identities = 70/146 (47%), Positives = 98/146 (67%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 +++D++ FV C CQR G IT R MP+ Y+L ++ FDV G D+MGPFP S+ ++LV Sbjct: 1 MYEDSKDFVRRCQSCQRQGGITTRDAMPLTYNLQVEIFDVWGIDFMGPFPKSHNCEYILV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+K VEA+P D + +M VIFP FG PR +++D GSHF+ FR++L K Sbjct: 181 AVDYVSK*VEAMPCSATDAKHAKRMFSEVIFPHFGTPRMVISDGGSHFVDKTFRELLRKM 360 Query: 871 DVNHRVASPYHPQSSGQVELSNREIK 948 H + + YHPQ+SGQ E SN++IK Sbjct: 361 GAKHNITTLYHPQTSGQAETSNKQIK 438 Score = 75.3 bits (158), Expect = 2e-12 Identities = 47/99 (47%), Positives = 53/99 (53%) Frame = -3 / -2 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL *G * L L L K KC+P S++ LG P G MT +IL S Sbjct: 407 PLV*GW*SVVMLCLAPILRRSSLKVLSTKCDPPSLMTILGVPK*GKMTSENILFACLASV 228 Query: 737 FLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 L GIASTHL T*STAT+ +LGNGPI S P TSN Sbjct: 227 ALHGIASTHLDT*STATRIYSQL*DLGNGPIKSMPHTSN 111 Score = 44.1 bits (90), Expect(2) = 7e-07 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = -2 / -1 Query: 717 YPLSDVIHSN*DVSVPIGTREWSHIIKARDIKWFNDK*IVHRHFLTLSDIPYSLAFVTRQ 538 + L ++ + D+ + REWSH + A I++F+ + RH + SD SLA + Sbjct: 207 HSLGHIVDCHQDILAIMRLREWSHKVNAPYIEYFHL*VVCERHCVASSDPSLSLAALATS 28 Query: 537 DKLTGI 520 DK+ GI Sbjct: 27 DKILGI 10 Score = 30.9 bits (61), Expect(2) = 7e-07 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = -2 / -1 Query: 948 FDLPITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLF 769 FDL + L L T LRM+ + M+ L+ +E ++EV*+ +++ S +K + D Sbjct: 438 FDLFV*SLCLATGLRMVECGDVMLGAHLA*KFSEGLVDEV*SPVTYDHSWGTKMRKNDF* 259 Query: 768 KH 763 +H Sbjct: 258 EH 253 Score = 33.6 bits (67), Expect = 6.4 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = +3 / +3 Query: 534 CLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIP 659 C L +P R H + NA + I C+G *LYGTIP Sbjct: 24 CQTLPELPTTRRDHYSRRNASHIQPTSGNIRCMGH*LYGTIP 149
>LOC_Os02g10340:12002.t00882:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6251 Score = 59.3 bits (123), Expect(6) = 1e-43 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 5220 GLHAAGRTLVGKAFRQGFFWPTALKDACDMV*RCEACQFHSKHTKLPAQALQTIPLTWPF 5399 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5400 SC*GLDILGPFPRGQG 5447 Score = 51.0 bits (105), Expect(6) = 1e-43 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5553 IFCRYGLPHRIITDNGSQFISVDFQDYCIGLGVKICFASVSHPQSNGQVERAN 5711 Score = 44.6 bits (91), Expect(6) = 1e-43 Identities = 17/43 (39%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R Q A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5955 DVNLLEEHREQVAVRAASYQQALRRYHEKRIRARIPSIGDYVL 6083 Score = 41.4 bits (84), Expect(6) = 1e-43 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK +K Sbjct: 5448 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIK 5549 Score = 37.3 bits (75), Expect(6) = 1e-43 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5769 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPGELRHQS 5903 Score = 35.9 bits (72), Expect(6) = 1e-43 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V GA KI + +G Sbjct: 6114 KLSPKWEGPYTITQVLWPGAFKIADGDG 6197
>LOC_Os06g40270:12006.t03723:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4371 Score = 56.5 bits (117), Expect(6) = 1e-43 Identities = 26/83 (31%), Positives = 33/83 (39%) Frame = +1 / +2 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 ++ E G + AG K Q GF+WP KDA V C+ CQ TK + Sbjct: 3320 DIHEEICGSHAAGRTLVGKAFQQGFFWPNALKDACDMVQQCEACQFHSKHTKLPAQALQT 3499 Query: 604 SLVIKPFDVSGFDYMGPFPSSNG 672 P G D + PFP G Sbjct: 3500 IPFTWPLSCWGLDILRPFPRGQG 3568 Score = 47.3 bits (97), Expect(6) = 1e-43 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVE 927 IF +FG+P ++TD+GS FI F+ + V AS HPQS+ QVE Sbjct: 3674 IFCKFGLPHRIITDNGSQFISADFQDYCIRLGVKICFASVSHPQSN*QVE 3823 Score = 45.1 bits (92), Expect(6) = 1e-43 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 4075 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARMLSIGDYVL 4203 Score = 41.4 bits (84), Expect(6) = 1e-43 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 KNW +L LWA T +P+ +VYG P EL H++ Sbjct: 3889 KNWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 4023 Score = 39.6 bits (80), Expect(6) = 1e-43 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 3569 GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 3670 Score = 39.6 bits (80), Expect(6) = 1e-43 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 4234 KLSPKWEGPYTITQVLRPGAFKIADGDG 4317
>LOC_Os01g21690:12001.t01906:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 3683 Score = 142 bits (304), Expect(3) = 1e-43 Identities = 52/95 (54%), Positives = 70/95 (73%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT+F+D+R+FV C CQR G IT R MP+ Y+L ++ Sbjct: 3378 YGGHYGAFRTQAKIWQSGFFWPTMFEDSREFVRRCTSCQRQGGITARDAMPLTYNLQVEI 3557 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAI 726 FDV G D+MGPFP S ++LVA+DYV+KWVEA+ Sbjct: 3558 FDVWGIDFMGPFPKSRSCEYILVAIDYVSKWVEAM 3662 Score = 38.2 bits (77), Expect(3) = 1e-43 Identities = 12/38 (31%), Positives = 24/38 (63%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K ++ + WD+P+LY+ DG++RR E+G Sbjct: 3231 ENQRKLKYESCRHIWDEPYLYRVCSDGLLRRCVPTEEG 3344 Score = 36.8 bits (74), Expect(3) = 1e-43 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPPSFTYQQKK 310 S PWYA+ NY+V+ Y+PP ++ K Sbjct: 3171 SNPWYANIVNYMVSNYLPPGENQRKLK 3251 Score = 40.0 bits (81), Expect(2) = 7e-07 Identities = 20/35 (57%), Positives = 24/35 (68%) Frame = -3 / -2 Query: 725 IASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 IASTHL T*S AT+ +LG GP+ S P+TSN Sbjct: 3661 IASTHLET*SIATRMYSQLRDLGKGPMKSIPQTSN 3557 Score = 35.0 bits (70), Expect(2) = 7e-07 Identities = 22/51 (43%), Positives = 25/51 (49%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P LW TN S VGQ KP C L V + +PP* Sbjct: 3529 GIASRAVIPPCLWQLVHLLTNSLESSNIVGQKKPLCQILAWVRNAP*WPP* 3377
>LOC_Os02g32880:12002.t02931:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10828 Score = 48.7 bits (100), Expect(7) = 3e-43 Identities = 17/43 (39%), Positives = 31/43 (72%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E+R Q A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 10532 DVNLLEEYREQVAARAASYQQALRRYHEKRIRARILSIGDYVL 10660 Score = 46.4 bits (95), Expect(7) = 3e-43 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+G VE +N Sbjct: 10130 IFCRYGLPHRIITDNGS*FISADFQDYCIGLGVKICFASVSHPQSNG*VERAN 10288 Score = 43.7 bits (89), Expect(7) = 3e-43 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + AG K + GF+WPT KDA V C+ CQ Sbjct: 9797 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQ 9910 Score = 40.5 bits (82), Expect(7) = 3e-43 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY+ + VA+D TKW+EA PT +IK +K Sbjct: 10025 GYSFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 10126 Score = 39.6 bits (80), Expect(7) = 3e-43 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 10691 KLSPKWEGPYTITQVLRPGAFKIADGDG 10774 Score = 38.6 bits (78), Expect(7) = 3e-43 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 10346 KKWVEELPSVLWAMRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 10480 Score = 27.2 bits (53), Expect(7) = 3e-43 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +2 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 9971 PFSCWGLDILGPFPRGQG 10024
>LOC_Os08g12920:12008.t01170:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6248 Score = 61.6 bits (128), Expect(6) = 7e-43 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 5217 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLLVQALQTIPLTWPF 5396 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5397 SCWGLDILGPFPRGQG 5444 Score = 49.6 bits (102), Expect(6) = 7e-43 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+ S FI F+ V AS HPQS+GQVE +N Sbjct: 5550 IFCRYGLPHRIITDNSSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5708 Score = 41.4 bits (84), Expect(6) = 7e-43 Identities = 16/43 (37%), Positives = 28/43 (65%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L E R + A +++ + R+H+KRI+ R ++GDYVL Sbjct: 5952 DVNLLKEHRERVAVQAASYQQSLCRYHEKRIRARILSIGDYVL 6080 Score = 40.0 bits (81), Expect(6) = 7e-43 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY+I +V R GA KI + +G Sbjct: 6111 KLSPKWEGPYMITQVLRPGAFKIADGDG 6194 Score = 37.7 bits (76), Expect(6) = 7e-43 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+E +PT +IK ++ Sbjct: 5445 GYRFLFVAIDKFTKWIEEVPTGEIKADNAIKFIR 5546 Score = 36.3 bits (73), Expect(6) = 7e-43 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5766 KKWVEELPLVLWAVRTTPTTSNKETPFFLVYGSEAMLPSELRHQS 5900
>LOC_Os03g38284:12003.t03276:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5801 Score = 61.1 bits (127), Expect(6) = 1e-42 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 4770 GSHAAGRTLVGKAFRQGFFWPTDLKDACDIVQRCEACQFHSKHTKLPAQALQTIPLTWPF 4949 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 4950 SCWGLDILGPFPRGQG 4997 Score = 45.1 bits (92), Expect(6) = 1e-42 Identities = 21/53 (39%), Positives = 30/53 (56%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I R+G+P ++T++G FI F+ V AS HPQS+GQVE +N Sbjct: 5103 ILCRYGLPHRIITNNGPQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5261 Score = 40.9 bits (83), Expect(6) = 1e-42 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG FP EL H++ Sbjct: 5319 KKWVEELPSVLWAMHTTLTTSNKETPFFLVYGSEAMFPGELRHQS 5453 Score = 40.9 bits (83), Expect(6) = 1e-42 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ ++GDYVL Sbjct: 5505 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRACILSIGDYVL 5633 Score = 40.5 bits (82), Expect(6) = 1e-42 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VI 780 GY + VA+D TKW+EA+PT +IK ++ ++ Sbjct: 4998 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIRGIL 5108 Score = 37.3 bits (75), Expect(6) = 1e-42 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKI 1407 +L KWEGPY I +V R GA KI Sbjct: 5664 KLSPKWEGPYTITQVLRPGAFKI 5732
>LOC_Os03g33300:12003.t02923:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7718 Score = 90.0 bits (190), Expect(4) = 2e-42 Identities = 32/67 (47%), Positives = 46/67 (68%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ Q GF+WPT+++D+++FV C CQR G IT R MP+ Y+L ++ Sbjct: 7311 YGGHYGAFRTQAKIWQCGFFWPTMYEDSKEFVRRCPSCQRQGGITARDAMPLTYNLQVEI 7490 Query: 622 FDVSGFD 642 FDV G D Sbjct: 7491 FDVWGID 7511 Score = 75.3 bits (158), Expect(4) = 2e-42 Identities = 32/56 (57%), Positives = 40/56 (71%) Frame = +1 / +3 Query: 682 VLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVF 849 +LVAVDYV+KWVEA+ AD + KML +IFPRFG PR +++D GSHFI F Sbjct: 7548 ILVAVDYVSKWVEAMLCSAADAKHTKKMLIEIIFPRFGTPRMVISDGGSHFIDKTF 7715 Score = 39.1 bits (79), Expect(4) = 2e-42 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++K +D R WD+P+LY+ G++RR EQG Sbjct: 7164 ENQRKLKYDSRRNIWDEPYLYRVCSVGLLRRCVPTEQG 7277 Score = 26.3 bits (51), Expect(4) = 2e-42 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 / +3 Query: 236 PWYADYANYIVAKYIPPSFTYQQKK 310 P + NY+V+KYIPP ++ K Sbjct: 7110 PVDGNIVNYMVSKYIPPGENQRKLK 7184 Score = 63.4 bits (132), Expect(2) = 5e-12 Identities = 29/51 (56%), Positives = 36/51 (70%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATK 684 MKCEP S++ LG PNLG M ++I + + SA L IASTHL T*STAT+ Sbjct: 7702 MKCEPPSLMTILGVPNLGKMISINIFLVCFASAALHNIASTHLET*STATR 7550 Score = 29.0 bits (57), Expect(2) = 5e-12 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP* 441 GI+ R VI P L TN S VGQ KP C L V + +PP* Sbjct: 7462 GIASRAVIPPCL*QLGHLLTNSFESSYIVGQKKPHCQILAWVRNAP*WPP* 7310 Score = 40.0 bits (81), Expect = 0.075 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = -2 / -1 Query: 840 MNEV*TVISHQISRDSKSWEYDLFKHLNGGVVISIFSGDSLYPLSDVI 697 +NEV T +++ +K WE DL++HL G + I + SL PL D++ Sbjct: 7706 VNEVRTSVTYDHPWGTKPWEDDLYQHLLGMLRIRSAAQHSLNPLGDIV 7563
>LOC_Os01g36430:12001.t03191:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6374 Score = 58.8 bits (122), Expect(6) = 2e-42 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + F+WPT KDA V C+ CQ TK + + PF Sbjct: 5343 GSHAAGRTLVGKAFRQEFFWPTALKDACDMVQRCETCQFHSKHTKLPAQALQTIPLTWPF 5522 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5523 SCWGLDILGPFPRGQG 5570 Score = 52.4 bits (108), Expect(6) = 2e-42 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5676 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5834 Score = 40.9 bits (83), Expect(6) = 2e-42 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ ++GDYVL Sbjct: 6078 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRACILSIGDYVL 6206 Score = 38.2 bits (77), Expect(6) = 2e-42 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK ++ Sbjct: 5571 GYKFLFVAIDKFTKWIEAAPTGEIKADNAIKFIR 5672 Score = 37.7 bits (76), Expect(6) = 2e-42 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I + R GA KI + +G Sbjct: 6237 KLSPKWEGPYTITQALRPGAYKIADDDG 6320 Score = 36.8 bits (74), Expect(6) = 2e-42 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5892 KKWVEELPSVLWAMRTTPTTSNKGTPFFLVYGSEAMLPGELRHQS 6026
>LOC_Os02g58770:12002.t05447:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10574 Score = 131 bits (280), Expect(3) = 3e-42 Identities = 51/150 (34%), Positives = 83/150 (55%) Frame = +1 / +3 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PS G+ +L A+DY +KW EA+P + I L+ I RFGVP + +D+ F Sbjct: 9747 PSPRGHRFILAAIDYFSKWAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKSFK 9926 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 + + KY + ++ Y+PQ++G E N+ + IL+K V++ R++W +L +ALW Sbjct: 9927 SQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALW 10106 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLELE 1107 AY + P +PY +VYG PLE++ Sbjct: 10107 AY*VTVRTPTQATPYSLVYGSEAVLPLEIQ 10196 Score = 54.2 bits (112), Expect(3) = 3e-42 Identities = 22/76 (28%), Positives = 36/76 (47%) Frame = +1 / +3 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 EV GG+ + + H + +G+YWP + D K +C CQ N + P++ Sbjct: 9507 EVHHGVCGGHQSRPKMYHSIRLAGYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPAPLHP 9686 Query: 604 SLVIKPFDVSGFDYMG 651 ++ PFD G D +G Sbjct: 9687 TVPSWPFDAWGIDVIG 9734 Score = 42.3 bits (86), Expect(3) = 3e-42 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +1 / +3 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEGNFP 1431 G+ KWEGPYVIE+ Y GA ++ + +G+ P Sbjct: 10434 GKFEPKWEGPYVIEQAYDGGAYQLIDHQGSRP 10529
>LOC_Os09g21320:12009.t01866:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7174 Score = 57.4 bits (119), Expect(6) = 3e-42 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ Q TK + + PF Sbjct: 6143 GSHAAGRTLVGKAFRQGFFWPTTLKDACDMVQRCEAYQFHSKHTKLPAQALQTIPLTWPF 6322 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 6323 SCWGLDILGPFPRGQG 6370 Score = 50.1 bits (103), Expect(6) = 3e-42 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+ S FI F+ + V AS +PQS+GQVE +N Sbjct: 6476 IFCRFGLPHRIITDNSSQFISADFQDYCIRLGVKICFASVSYPQSNGQVERTN 6634 Score = 40.9 bits (83), Expect(6) = 3e-42 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 +++ L+E R + A +++ ++R+H+KRI+ R +GDYVL Sbjct: 6878 NVNLLEEHRERVAVRAVSYQQALRRYHEKRIRARTLLIGDYVL 7006 Score = 40.0 bits (81), Expect(6) = 3e-42 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + +A+D +TKW+EA PT +IK +K Sbjct: 6371 GYRFLFMAIDKITKWIEATPTGEIKADNAIKFIK 6472 Score = 38.2 bits (77), Expect(6) = 3e-42 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ ++YG P EL H++ Sbjct: 6692 KKWVEELPSVLWAVRTTLTTSNKETPFFLMYGSEAMLPTELRHQS 6826 Score = 37.7 bits (76), Expect(6) = 3e-42 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V + GA KI + +G Sbjct: 7037 KLSPKWEGPYTITQVLQPGAFKIADGDG 7120
>LOC_Os05g14110:12005.t01186:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6392 Score = 54.7 bits (113), Expect(6) = 4e-42 Identities = 25/76 (32%), Positives = 31/76 (40%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G AG K + F+WPT KD V C+ CQ TK + + PF Sbjct: 5361 GSDAAGRTLVGKAFRQEFFWPTALKDTCDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 5540 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5541 SCWGLDILGPFPRGQG 5588 Score = 50.1 bits (103), Expect(6) = 4e-42 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+ S FI F + V AS HPQS+GQVE +N Sbjct: 5694 IFCRYGLPHRIITDNDSQFISSDFHDYCIELGVKICFASVSHPQSNGQVERAN 5852 Score = 45.5 bits (93), Expect(6) = 4e-42 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 6096 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARTLSIGDYVL 6224 Score = 42.3 bits (86), Expect(6) = 4e-42 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY+I +V R GA KI N +G Sbjct: 6255 KLSPKWEGPYMITQVLRPGAFKIANGDG 6338 Score = 38.6 bits (78), Expect(6) = 4e-42 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5910 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 6044 Score = 32.7 bits (65), Expect(6) = 4e-42 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 / +3 Query: 673 YTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 Y + VA+D TKW+EA P +IK ++ Sbjct: 5592 YKFLFVAIDKFTKWIEATPMGEIKADNAIKFIR 5690
>LOC_Os02g17820:12002.t01576:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6375 Score = 51.9 bits (107), Expect(6) = 4e-42 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5569 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVPHPQSNGQVERAN 5727 Score = 51.0 bits (105), Expect(6) = 4e-42 Identities = 25/76 (32%), Positives = 31/76 (40%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K Q GF+W T KDA V C+ Q TK + + PF Sbjct: 5236 GSHAADRTLVGKAFQQGFFWQTALKDACDMVQRCEAYQFHSKHTKLPVQALQTISLTWPF 5415 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5416 SCWGLDILGPFP*GQG 5463 Score = 44.6 bits (91), Expect(6) = 4e-42 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5971 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARILSIGDYVL 6099 Score = 39.6 bits (80), Expect(6) = 4e-42 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 5464 GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 5565 Score = 39.6 bits (80), Expect(6) = 4e-42 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6130 KLSPKWEGPYTITQVLRPGAFKIADGDG 6213 Score = 37.3 bits (75), Expect(6) = 4e-42 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ ++YG P EL H++ Sbjct: 5785 KKWVEELPSILWAIRTTLTTSNKETPFFLMYGSEAMLPSELRHQS 5919
>LOC_Os05g31930:12005.t02789:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5374 Score = 59.7 bits (124), Expect(6) = 4e-42 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 4343 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 4522 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 4523 SCWGLD*LGPFP*GQG 4570 Score = 49.2 bits (101), Expect(6) = 4e-42 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++T +GS FI F+ V AS HPQS+GQVE +N Sbjct: 4676 IFCRYGLPHRIITHNGSQFISADFQDYCIGLGVQICFASVSHPQSNGQVERAN 4834 Score = 43.7 bits (89), Expect(6) = 4e-42 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5078 DLNLLEEHRERVAIRAASYQQALRRYHEKRIRARILSIGDYVL 5206 Score = 40.0 bits (81), Expect(6) = 4e-42 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK ++ Sbjct: 4571 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIR 4672 Score = 36.8 bits (74), Expect(6) = 4e-42 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKI 1407 +L KWEGPY I +V R GA KI Sbjct: 5237 KLSLKWEGPYTITQVLRPGAFKI 5305 Score = 34.5 bits (69), Expect(6) = 4e-42 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VY P EL H++ Sbjct: 4892 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYNSEAMLPDELRHQS 5026
>LOC_Os04g58450:12004.t05308:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6201 Score = 60.2 bits (125), Expect(6) = 6e-42 Identities = 26/76 (34%), Positives = 34/76 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT K+A V C+ CQ TK + + PF Sbjct: 5170 GSHAAGRTLVGKAFRQGFFWPTALKNACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 5349 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5350 SCWGLDILGPFPRGQG 5397 Score = 52.4 bits (108), Expect(6) = 6e-42 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5503 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5661 Score = 40.0 bits (81), Expect(6) = 6e-42 Identities = 14/42 (33%), Positives = 29/42 (69%) Frame = +1 / +1 Query: 1180 ISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 ++ L++ R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5908 VNLLEKHRERVAVRAASYQQTLRRYHEKRIRARILSIGDYVL 6033 Score = 39.6 bits (80), Expect(6) = 6e-42 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6064 KLSPKWEGPYTITQVLRPGAFKIADGDG 6147 Score = 36.8 bits (74), Expect(6) = 6e-42 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+ T +IK +K Sbjct: 5398 GYRFLFVAIDKFTKWIEAVLTGEIKADNAIKFIK 5499 Score = 34.5 bits (69), Expect(6) = 6e-42 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T + + +VYG P EL+H++ Sbjct: 5719 KRWVEELPSVLWAVRTTPTTSNKETSFFLVYGSEAMLPGELQHQS 5853 Score = 33.1 bits (66), Expect = 8.8 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS IL AP R T I *GPSHL SL Sbjct: 6146 PSPSAILNAPGRKTCVIV*GPSHLGESL 6063
>LOC_Os11g18790:12011.t01649:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5117 Score = 54.2 bits (112), Expect(6) = 6e-42 Identities = 25/76 (32%), Positives = 32/76 (42%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + G K + GF+WPT FKDA V C+ Q TK + + F Sbjct: 4065 GSHAGGRTLVGKAFRQGFFWPTAFKDACDMVQRCEAYQFHSKHTKLPAQVLQTIPLTWSF 4244 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 4245 SCWGLDILGPFPRGQG 4292 Score = 46.9 bits (96), Expect(6) = 6e-42 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+ S FI F+ V AS HP S+GQVE +N Sbjct: 4398 IFCRYGLPHRIITDNNSQFISADFQDYCIGLGVKICFASVSHPYSNGQVERAN 4556 Score = 42.8 bits (87), Expect(6) = 6e-42 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+++KRI+ R ++GDYVL Sbjct: 4800 DVNLLEEHRERVAVRAASYQQALRRYYEKRIKARTLSIGDYVL 4928 Score = 40.9 bits (83), Expect(6) = 6e-42 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY+I +V R GA KI + +G Sbjct: 4959 KLSPKWEGPYMITQVLRPGAFKIADVDG 5042 Score = 39.6 bits (80), Expect(6) = 6e-42 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 4293 GYKFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 4394 Score = 39.1 bits (79), Expect(6) = 6e-42 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 4614 KKWVEELPSVLWAVRTTPTTSNKKTPFFLVYGSEAMLPTELRHQS 4748
>LOC_Os12g11900:12012.t01063:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6335 Score = 54.2 bits (112), Expect(6) = 7e-42 Identities = 25/76 (32%), Positives = 32/76 (42%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG + GF+W T KDA V C+ CQ TK + + PF Sbjct: 5304 GSHAAGRTLVG*AFRQGFFWRTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 5483 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5484 SCWGLDILGPFPRGQG 5531 Score = 48.7 bits (100), Expect(6) = 7e-42 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+ ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5637 IFCRYGLSHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5795 Score = 43.2 bits (88), Expect(6) = 7e-42 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 6039 DVNLLKEHRERVAVRAASYQQALRRYHEKRIRARILSIGDYVL 6167 Score = 40.0 bits (81), Expect(6) = 7e-42 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK ++ Sbjct: 5532 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIR 5633 Score = 39.6 bits (80), Expect(6) = 7e-42 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6198 KLSPKWEGPYTITQVLRPGAFKIADGDG 6281 Score = 37.3 bits (75), Expect(6) = 7e-42 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5853 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPGELRHQS 5987
>LOC_Os02g30510:12002.t02744:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2934 Score = 53.3 bits (110), Expect(6) = 8e-42 Identities = 25/76 (32%), Positives = 32/76 (42%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WP KDA V C+ CQ TK + + PF Sbjct: 1903 GSHAAGRTLVGKAFR*GFFWPIALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 2082 Query: 625 DVSGFDYMGPFPSSNG 672 G D +G FP G Sbjct: 2083 SCWGLDILGLFPRGQG 2130 Score = 52.8 bits (109), Expect(6) = 8e-42 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2236 IFCRYGLPHRIITDNGSQFISADFQNYCIGLGVKICFASVSHPQSNGQVERAN 2394 Score = 40.0 bits (81), Expect(6) = 8e-42 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK ++ Sbjct: 2131 GYKFLFVAIDKFTKWIEAVPTGEIKADNAIKFIR 2232 Score = 39.6 bits (80), Expect(6) = 8e-42 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E + A +++ ++R+H KRI+ R ++GDYVL Sbjct: 2638 DVNLLEEHCDRVAVRAASYQQALRRYHKKRIRARILSIGDYVL 2766 Score = 39.1 bits (79), Expect(6) = 8e-42 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 2797 KLSPKWEGPYTITQVLRPGAYKIADGDG 2880 Score = 38.2 bits (77), Expect(6) = 8e-42 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2452 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPSELRHQS 2586
>LOC_Os11g28410:12011.t02454:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10449 Score = 127 bits (271), Expect(5) = 8e-42 Identities = 54/158 (34%), Positives = 85/158 (53%) Frame = +1 / +1 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G+ VLVA DY TKW EA+P KN H I + I RFG+P+ L TD G+ F+ Sbjct: 1030 SSKGHRFVLVATDYFTKWAEAVPLKNMTHTEVIDFILKHIIHRFGIPQTLTTDQGASFMS 1209 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 + Y + +SPY+ Q++GQ E SN+ + +++K + K W L +ALW Sbjct: 1210 KEVKSFTESYGIKLLSSSPYYAQANGQAESSNKTLLKLVKKKIKEHPKRWHEVLSEALWV 1389 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 + ++P+++VYG+ P+E+ + IK+ Sbjct: 1390 HRIPKHGATKVTPFELVYGQEAVLPVEVNLGSLRYIKQ 1503 Score = 44.1 bits (90), Expect(5) = 8e-42 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 / +1 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNI 573 EV+ G + + + + + GFYWP + D K+ C+ CQR GN+ Sbjct: 787 EVNEGICGTHQSAHKINWLLRRVGFYWPKMIDDCFKYYRGCEACQRFGNV 936 Score = 29.0 bits (57), Expect(5) = 8e-42 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +1 / +1 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++ + F VGD + Sbjct: 1570 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLI 1671 Score = 23.5 bits (45), Expect(5) = 8e-42 Identities = 6/21 (28%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 356 LYKEGVDGVIRRVTEHEQGQI 418 LY+ +DGV+ + + +Q ++ Sbjct: 715 LYRRNIDGVLLKCLDEDQSKV 777 Score = 22.1 bits (42), Expect(5) = 8e-42 Identities = 7/23 (30%), Positives = 11/23 (47%) Frame = +1 / +1 Query: 1354 WEGPYVIEEVYRSGAIKINNTEG 1422 WEGPY + + R + +G Sbjct: 1732 WEGPYRVCGIVRGNTYFLETLQG 1800
>LOC_Os09g27300:12009.t02409:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7672 Score = 129 bits (276), Expect(3) = 9e-42 Identities = 51/150 (34%), Positives = 82/150 (54%) Frame = +1 / +2 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PSS G+ +L A DY +KW EA+P + I L+ RFGVP + +D+ F Sbjct: 6182 PSSRGHRFILAATDYFSKWAEAVPLREVKSSDVINFLERHNIYRFGVPHRITSDNAKAFK 6361 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 + + KY + ++ Y+PQ++G E N+ + IL+K V++ R++W +L +ALW Sbjct: 6362 SQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALW 6541 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLELE 1107 AY + P +PY +VYG PLE++ Sbjct: 6542 AYRVTVRTPTQATPYSLVYGSEAVLPLEIQ 6631 Score = 53.3 bits (110), Expect(3) = 9e-42 Identities = 22/76 (28%), Positives = 36/76 (47%) Frame = +1 / +2 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 EV GG+ +G + H + +G+YWP + D K +C CQ N + ++ Sbjct: 5942 EVHHGVCGGHQSGPKMYHSIRLAGYYWPGIMADCLKTAKTCHGCQIHDNFKHQPPALLHP 6121 Query: 604 SLVIKPFDVSGFDYMG 651 ++ PFD G D +G Sbjct: 6122 TVPSWPFDAWGIDVIG 6169 Score = 42.3 bits (86), Expect(3) = 9e-42 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +1 / +2 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEGNFP 1431 G+ KWEGPYVIE+ Y GA ++ + +G+ P Sbjct: 6869 GKFEPKWEGPYVIEQAYDGGAYQLIDHQGSRP 6964
>LOC_Os04g49030:12004.t04419:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1761 Score = 53.8 bits (111), Expect(6) = 1e-41 Identities = 24/53 (45%), Positives = 33/53 (62%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++T++GS FI F+ + V AS HPQS+GQVE +N Sbjct: 1063 IFCRFGLPHRIITNNGSQFISADFQDYCTRLGVKICFASVSHPQSNGQVEKAN 1221 Score = 52.4 bits (108), Expect(6) = 1e-41 Identities = 25/76 (32%), Positives = 32/76 (42%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V + CQ TK + + PF Sbjct: 730 GSHAAGRILVGKAFRQGFFWPTALKDACDMVQGFEACQFHSKHTKLLAQALQTISLTWPF 909 Query: 625 DVSGFDYMGPFPSSNG 672 G D +G FP G Sbjct: 910 SCWGLDILGLFPRGQG 957 Score = 44.1 bits (90), Expect(6) = 1e-41 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ + R+H+KRI+ R ++GDYVL Sbjct: 1465 DVNLLEEHRERVAVRAASYQQALHRYHEKRIRARTLSIGDYVL 1593 Score = 39.6 bits (80), Expect(6) = 1e-41 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 1624 KLSPKWEGPYTITQVLRPGAFKIADGDG 1707 Score = 37.3 bits (75), Expect(6) = 1e-41 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT IK +K Sbjct: 958 GYRFLFVAIDKFTKWIEARPTGEIKADNVIKFIK 1059 Score = 35.4 bits (71), Expect(6) = 1e-41 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W ++ LWA T +P+ +VYG P +L H++ Sbjct: 1279 KKWVEEVPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTKLRHQS 1413
>LOC_Os11g23140:12011.t01983:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6681 Score = 60.6 bits (126), Expect(6) = 1e-41 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 4728 GSHAAGRILVGKAFRQGFFWPTTLKDA*DMVQRCEACQFHSKHTKLPAQVLQTIPLTWPF 4907 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 4908 SCWGLDILGPFPRGQG 4955 Score = 46.0 bits (94), Expect(6) = 1e-41 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+ S FI F+ V AS HPQS+ QVE +N Sbjct: 5061 IFCRYGLPHRIITDNSSQFISADFQDYCIGLGVKICFASVSHPQSNEQVERAN 5219 Score = 43.7 bits (89), Expect(6) = 1e-41 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ ++E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5407 DVNLIEEHRERVAVRAASYQQALRRYHEKRIRARILSIGDYVL 5535 Score = 41.4 bits (84), Expect(6) = 1e-41 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + +A+D TKW+EA+PT+ +IK +K Sbjct: 4956 GYKFLFLAIDKFTKWIEAVPTEGIKADNAIKFIK 5057 Score = 39.6 bits (80), Expect(6) = 1e-41 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 5566 KLSPKWEGPYTITQVLRPGAFKIADGDG 5649 Score = 30.9 bits (61), Expect(6) = 1e-41 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 / +3 Query: 1000 LDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHK 1113 L LWA T +P+ +VYG P EL H+ Sbjct: 5238 LPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPSELRHQ 5351 Score = 33.1 bits (66), Expect = 8.8 Identities = 17/28 (60%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS IL AP R T I *GPSHL SL Sbjct: 5648 PSPSAILNAPGRKTCVIV*GPSHLGESL 5565
>LOC_Os07g49500:12007.t04577:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5730 Score = 54.2 bits (112), Expect(6) = 1e-41 Identities = 25/72 (34%), Positives = 32/72 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + F Sbjct: 4732 GLHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWQF 4911 Query: 625 DVSGFDYMGPFP 660 G D +GPFP Sbjct: 4912 SC*GLDILGPFP 4947 Score = 52.4 bits (108), Expect(6) = 1e-41 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5065 IFCRYGLPHCIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5223 Score = 42.8 bits (87), Expect(6) = 1e-41 Identities = 15/43 (34%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GD+VL Sbjct: 5467 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARILSIGDFVL 5595 Score = 38.2 bits (77), Expect(6) = 1e-41 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 / +1 Query: 667 NGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 +GY + VA+D TKW++A PT +IK +K Sbjct: 4957 SGYRFLFVAIDKFTKWIKATPTGEIKADNAIKFIK 5061 Score = 38.2 bits (77), Expect(6) = 1e-41 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5281 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPSELRHQS 5415 Score = 36.3 bits (73), Expect(6) = 1e-41 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R A KI + +G Sbjct: 5626 KLSPKWEGPYTITQVLRPDAFKIADGDG 5709
>LOC_Os11g20460:12011.t01815:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6620 Score = 122 bits (261), Expect(5) = 3e-41 Identities = 49/141 (34%), Positives = 79/141 (56%) Frame = +1 / +1 Query: 682 VLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKML 861 VLVA DY TKW EA+P KN H + + I RFG+P+ L TD G+ F+ + Sbjct: 5803 VLVATDYFTKWAEAVPLKNMTHTEVVDFILKHIIHRFGIPQTLTTDQGASFMSKEVKNFS 5982 Query: 862 AKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKN 1041 YD+ +SPY+ Q++GQ E SN+ + +++K + K W L +ALW + + Sbjct: 5983 ESYDIKLLSSSPYNAQANGQAESSNKTLLKLVKKKIEEYPKRWHEVLSEALWVHRISKHG 6162 Query: 1042 PMGMSPYKMVYGKACYFPLEL 1104 ++P+++VYG+ P+E+ Sbjct: 6163 ATKVTPFELVYGQEAVLPVEV 6225 Score = 40.5 bits (82), Expect(5) = 3e-41 Identities = 18/69 (26%), Positives = 31/69 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G Y + + + ++GFY P + D K+ C+ CQR GN+ +N + F Sbjct: 5560 GTYQSAHKMNWLLRRAGFY*PKMIDDCFKYYRGCEACQRFGNVQLAPVAMLNPIIKPWSF 5739 Query: 625 DVSGFDYMG 651 D++G Sbjct: 5740 REWALDFIG 5766 Score = 30.4 bits (60), Expect(5) = 3e-41 Identities = 12/34 (35%), Positives = 23/34 (67%) Frame = +1 / +3 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++++ F VGD V Sbjct: 6318 RLKALEEIEKEKKRVAKAYNKRVKEKLFQVGDLV 6419 Score = 25.4 bits (49), Expect(5) = 3e-41 Identities = 7/24 (29%), Positives = 15/24 (62%) Frame = +2 / +1 Query: 347 DPHLYKEGVDGVIRRVTEHEQGQI 418 D LY+ +DGV+ + + +Q ++ Sbjct: 5458 DEDLYRRNIDGVLLKCLDEDQSKV 5529 Score = 25.4 bits (49), Expect(5) = 3e-41 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = +1 / +3 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 G+ WEGPY + + R A + +G Sbjct: 6462 GKWSPSWEGPYRVCGIVRGNAYFLETLQG 6548
>LOC_Os06g29270:12006.t02631:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6854 Score = 129 bits (277), Expect(4) = 4e-41 Identities = 54/158 (34%), Positives = 87/158 (55%) Frame = +1 / +3 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G+ VLVA DY TKW EA+P KN H I + I RFG+P+ L TD G+ F+ Sbjct: 6060 SSKGHRFVLVATDYFTKWAEAVPLKNMTHTEVIDFILKHIIHRFGIPQTLTTDQGASFMS 6239 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 + Y + +SPY+ Q++GQ E SN+ + +++K + K W L +ALWA Sbjct: 6240 KEVKSFTESYGIKLLSSSPYYAQANGQAEPSNKTLLKLVKKKIEEHPKRWHEVLSEALWA 6419 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 + + ++P+++VYG+ P+E+ + +K+ Sbjct: 6420 HRISKHGATKVTPFELVYGQEAVLPVEVNLGSLRCVKQ 6533 Score = 44.1 bits (90), Expect(4) = 4e-41 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +1 / +3 Query: 487 QSGFYWPTLFKDARKFVLSCDECQRIGNI 573 ++GFYWP + D K+ C+ CQR GN+ Sbjct: 5880 RAGFYWPWMIDDCFKYYRGCEACQRFGNV 5966 Score = 29.5 bits (58), Expect(4) = 4e-41 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 / +3 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++ + F VGD V Sbjct: 6600 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLV 6701 Score = 23.1 bits (44), Expect(4) = 4e-41 Identities = 6/21 (28%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 356 LYKEGVDGVIRRVTEHEQGQI 418 LY+ +DGV+ + + +Q ++ Sbjct: 5746 LYRRNIDGVLVKCLDEDQSKV 5808
>LOC_Os08g13170:12008.t01195:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7438 Score = 118 bits (252), Expect(5) = 4e-41 Identities = 49/145 (33%), Positives = 80/145 (55%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVF 849 G +LVA DY TKW EA+P KN H I + I RFG+P+ L+TD G+ F+ Sbjct: 6605 GDRFMLVATDYFTKWAEAVPLKNMTHTEVIDFILKHIIHRFGIPQTLITDQGASFMSKEV 6784 Query: 850 RKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGT 1029 + Y + +SPY+ Q++GQ + SN + +++K + K W L +ALWA+ Sbjct: 6785 KSFTESYGIKLLSSSPYYTQANGQAKSSNNTLLKLVKKKIEEYPKRWHEVLFEALWAHRI 6964 Query: 1030 AYKNPMGMSPYKMVYGKACYFPLEL 1104 + ++P+++VYG+ P+E+ Sbjct: 6965 SKHGATKVTPFELVYGQEAVLPVEV 7039 Score = 48.7 bits (100), Expect(5) = 4e-41 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 / +3 Query: 487 QSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMG 651 ++GFYWP + D K+ C+ CQR GN+ +N + PF D++G Sbjct: 6417 RAGFYWPKMIDDCFKYYRGCEACQRFGNVQLAPAAMLNPIIKPWPFRGWALDFIG 6581 Score = 29.5 bits (58), Expect(5) = 4e-41 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 / +2 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++ + F VGD V Sbjct: 7136 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLV 7237 Score = 24.9 bits (48), Expect(5) = 4e-41 Identities = 7/24 (29%), Positives = 15/24 (62%) Frame = +2 / +3 Query: 347 DPHLYKEGVDGVIRRVTEHEQGQI 418 D LY+ +DGV+ + + +Q ++ Sbjct: 6273 DGDLYRRNIDGVLLKCLDEDQSKV 6344 Score = 22.1 bits (42), Expect(5) = 4e-41 Identities = 8/29 (27%), Positives = 13/29 (44%) Frame = +1 / +2 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 G+ WEGPY + + R + +G Sbjct: 7280 GKWSPSWEGPYRVCGIVRGNVYFLEILQG 7366
>LOC_Os04g39750:12004.t03542:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1728 Score = 54.2 bits (112), Expect(6) = 5e-41 Identities = 27/84 (32%), Positives = 34/84 (40%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + G K + GF+ PT KDA V C+ CQ TK + + PF Sbjct: 730 GSHATGRTLVRKAFRQGFFLPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 909 Query: 625 DVSGFDYMGPFPSSNGYTHVLVAV 696 G D +GPFP G L V Sbjct: 910 SCWG*DILGPFPRGQGGYRFLFVV 981 Score = 50.6 bits (104), Expect(6) = 5e-41 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V S HPQS+GQVE +N Sbjct: 1063 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFTSVSHPQSNGQVERAN 1221 Score = 44.1 bits (90), Expect(6) = 5e-41 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 1465 DVNLLEEHRERVAVRAANYQQALRRYHEKRIRARILSIGDYVL 1593 Score = 40.0 bits (81), Expect(6) = 5e-41 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY+I +V R GA KI + +G Sbjct: 1624 KLSPKWEGPYMITQVLRPGAFKIADGDG 1707 Score = 37.7 bits (76), Expect(6) = 5e-41 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + V +D TKW++A+PT +IK +K Sbjct: 958 GYRFLFVVIDKFTKWIKAVPTGEIKADNAIKFIK 1059 Score = 33.6 bits (67), Expect(6) = 5e-41 Identities = 17/55 (30%), Positives = 23/55 (41%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFD 1146 K +L LWA T +P+ +VYG P EL H++ K N D Sbjct: 1279 KKLVEELPSVLWAVRTTPTTSSKETPFFLVYGSEAMLPSELRHQSTRVQKYSNED 1443
>LOC_Os11g11290:12011.t01017:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6130 Score = 52.4 bits (108), Expect(7) = 5e-41 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 5432 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 5590 Score = 42.8 bits (87), Expect(7) = 5e-41 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY +LVA+D TKW+EA+PT + +IK ++ Sbjct: 5327 GYRFLLVAIDKFTKWIEAVPTGEIKANNAIKFIR 5428 Score = 41.8 bits (85), Expect(7) = 5e-41 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITK 579 G + AG K + GF+WPT DA V C+ CQ TK Sbjct: 5099 GSHAAGRTLVGKAFRQGFFWPTALNDACDMVQRCEACQFHSKHTK 5233 Score = 40.0 bits (81), Expect(7) = 5e-41 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++ +H+ RIQ R ++GDYVL Sbjct: 5834 DVNLLEEHRERVAVQAASYQQALRCYHETRIQARILSIGDYVL 5962 Score = 36.8 bits (74), Expect(7) = 5e-41 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R A KI + +G Sbjct: 5993 KLSPKWEGPYTITQVLRPSAFKIADGDG 6076 Score = 35.9 bits (72), Expect(7) = 5e-41 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ ++YG P EL H++ Sbjct: 5648 KKWVEELPSVLWAVRTTPTTSNKETPFFLLYGSKAMLPGELRHQS 5782 Score = 27.2 bits (53), Expect(7) = 5e-41 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +2 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 5273 PFSCWGLDILGPFPRGQG 5326
>LOC_Os12g20270:12012.t01868:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6638 Score = 133 bits (286), Expect(3) = 6e-41 Identities = 56/148 (37%), Positives = 87/148 (58%) Frame = +1 / +3 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G+T +LVA DY TKWVEAIP K D +I+ +K I RFG+P+ + TD GS F+ Sbjct: 5799 SSKGHTFILVATDYFTKWVEAIPLKKVDSGDAIQFVKEHIINRFGIPQTITTDQGSIFVS 5978 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 F + + +SPY+ Q++GQ E SN+ + ++++ ++ + W +L +ALW+ Sbjct: 5979 DEFVQFADSIGIRLLNSSPYYAQANGQAEASNKSLIKLIKR*ISDYPRQWHIRLAEALWS 6158 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 Y A + + PYK+VYG P E+ Sbjct: 6159 YRMACHGSIQVPPYKLVYGHEAVLPWEV 6242 Score = 48.7 bits (100), Expect(3) = 6e-41 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +1 / +3 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMN 600 EV YG + + + + ++G++WPT+ +D K+ C +CQ+ G I + MN Sbjct: 5556 EVHEGIYGTHQSAHKMKWLLRRAGYFWPTMLEDCFKYYKGCQDCQKFGAIQRAPASAMN 5732 Score = 25.4 bits (49), Expect(3) = 6e-41 Identities = 10/37 (27%), Positives = 18/37 (48%) Frame = +2 / +3 Query: 308 KKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQGQI 418 +K + Y W D LY +DGV+ + +Q ++ Sbjct: 5436 RKVRYKALQYTWLDNELYYWTIDGVLLKCLSVDQAKV 5546 Score = 34.1 bits (68), Expect = 4.7 Identities = 17/26 (65%), Positives = 17/26 (65%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPL 666 S F GIASTHLV *S AT V PL Sbjct: 5881 STFFKGIASTHLVK*SVATNINVCPL 5804
>LOC_Os11g31990:12011.t02796:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5991 Score = 51.5 bits (106), Expect(6) = 9e-41 Identities = 22/61 (36%), Positives = 28/61 (45%) Frame = +1 / +1 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPF 657 K + GF+WPT KDA V C+ CQ TK + + PF G D + PF Sbjct: 4936 KAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLPTQALQTIPLTWPFSC*GLDILWPF 5115 Query: 658 P 660 P Sbjct: 5116 P 5118 Score = 46.0 bits (94), Expect(6) = 9e-41 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++T +GS FI F+ V AS HP S+GQVE +N Sbjct: 5236 IFCRYGLPHRIITVNGSQFISADFQDYCIGLGVKICFASVSHPHSNGQVERAN 5394 Score = 41.8 bits (85), Expect(6) = 9e-41 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +1 / +1 Query: 667 NGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 +GY + VA+D TKW+EA+PT +IK +K Sbjct: 5128 DGYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIK 5232 Score = 40.9 bits (83), Expect(6) = 9e-41 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++ +H+KRI+ R ++GDYVL Sbjct: 5638 DVNLLEEHRERVAVRAASYQQALRCYHEKRIRARILSIGDYVL 5766 Score = 39.6 bits (80), Expect(6) = 9e-41 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFD 1146 K W +L LWA T +P+ +VYG P EL H++ K N D Sbjct: 5452 KKWVEELSSVLWAVRTTPTMSNKETPFFLVYGSEAMLPSELRHQSTRVQKHSNED 5616 Score = 39.6 bits (80), Expect(6) = 9e-41 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 5797 KLSPKWEGPYTITQVLRPGAFKIADGDG 5880
>LOC_Os04g13110:12004.t01132:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6177 Score = 50.6 bits (104), Expect(7) = 9e-41 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQ E +N Sbjct: 5479 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQAERAN 5637 Score = 44.6 bits (91), Expect(7) = 9e-41 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 5881 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARILSIGDYVL 6009 Score = 43.7 bits (89), Expect(7) = 9e-41 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + AG K + GF+WPT KDA V C+ CQ Sbjct: 5146 GSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQ 5259 Score = 37.3 bits (75), Expect(7) = 9e-41 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA++ TKW+EA+PT +IK ++ Sbjct: 5374 GYRFLFVAINKFTKWIEAVPTGEIKADNAIKFVR 5475 Score = 37.3 bits (75), Expect(7) = 9e-41 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5695 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPDELRHQS 5829 Score = 35.4 bits (71), Expect(7) = 9e-41 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGP I +V R GA KI + +G Sbjct: 6040 KLSPKWEGPNTITQVLRPGAFKIADGDG 6123 Score = 27.2 bits (53), Expect(7) = 9e-41 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +1 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 5320 PFSCWGLDILGPFPRGQG 5373
>LOC_Os01g38150:12001.t03353:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3408 Score = 49.6 bits (102), Expect(7) = 9e-41 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HP S+GQV+ +N Sbjct: 2710 IFYRFGLPHRIITDNGSQFISANFQDYYIRLGVKICFASVSHP*SNGQVKRAN 2868 Score = 46.0 bits (94), Expect(7) = 9e-41 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 YG + AG R K + F+WPT KDA V C+ CQ Sbjct: 2374 YGSHAAGRRLVGKAFRQEFFWPTALKDACDMVQRCEACQ 2490 Score = 41.8 bits (85), Expect(7) = 9e-41 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ + R+H+KR + R ++GDYVL Sbjct: 3112 DVNLLEEHRERVAVRAASYQQALHRYHEKRTRARTLSIGDYVL 3240 Score = 38.6 bits (78), Expect(7) = 9e-41 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2926 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 3060 Score = 37.3 bits (75), Expect(7) = 9e-41 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIF 783 GY + +A+D TKW+E PT +IK +K + + Sbjct: 2605 GYRFLFMAIDKFTKWIEVTPTGEIKADNAIKFIKGIFY 2718 Score = 35.4 bits (71), Expect(7) = 9e-41 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R A KI + +G Sbjct: 3271 KLSPKWEGPYTITQVLRPCAFKIADGDG 3354 Score = 27.2 bits (53), Expect(7) = 9e-41 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +1 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 2551 PFSCWGLDILGPFPRGQG 2604
>LOC_Os04g57110:12004.t05178:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5661 Score = 56.5 bits (117), Expect(6) = 1e-40 Identities = 24/76 (31%), Positives = 33/76 (43%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + G + + GF+WPT KDA V C+ CQ T+ + + PF Sbjct: 4630 GSHAVGQTLVGRAFRQGFFWPTALKDACDMVHRCEACQFHSKHTRLPAQALQTIPLTWPF 4809 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 4810 *CWGLDILGPFPRGQG 4857 Score = 55.1 bits (114), Expect(6) = 1e-40 Identities = 25/53 (47%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HPQS+GQVE N Sbjct: 4963 IFCRFGLPHRIITDNGSQFISADFQDYCIRLGVKICFASVSHPQSNGQVEREN 5121 Score = 41.8 bits (85), Expect(6) = 1e-40 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A ++ ++ +H+KRI+ R ++GDYVL Sbjct: 5365 DVNLLEEHRERVAIRAASYQHALRHYHEKRIRARTLSIGDYVL 5493 Score = 36.8 bits (74), Expect(6) = 1e-40 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 673 YTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 Y + VA+D TKW+EA PT +IK +K Sbjct: 4861 YRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 4959 Score = 36.3 bits (73), Expect(6) = 1e-40 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEGN 1425 +L KWEGPY I +V GA KI + +G+ Sbjct: 5524 KLSPKWEGPYTITQVLWPGAFKIADGDGH 5610 Score = 32.2 bits (64), Expect(6) = 1e-40 Identities = 12/45 (26%), Positives = 20/45 (44%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W ++ LWA T + + ++YG P EL H++ Sbjct: 5179 KKWVEEIPSVLWAVRTTPTTSNKETRFFLMYGSEAMLPTELRHQS 5313 Score = 29.9 bits (59), Expect(2) = 1.3 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ M EP SV+ G PNL N+ ++++ Sbjct: 5108 TCPLL*G*ETEAKQILTPNLMQ*SWKSALMNWEPLSVMIRWGNPNLQNIPLMNLM 4944 Score = 23.1 bits (44), Expect(2) = 1.3 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 731 VGIASTHLVT*STAT 687 VG+AS HLV S AT Sbjct: 4919 VGVASIHLVNLSIAT 4875
>LOC_Os07g42680:12007.t03918:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4021 Score = 57.0 bits (118), Expect(6) = 2e-40 Identities = 25/76 (32%), Positives = 36/76 (47%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GFYWPT +DA++ V C CQ T + + + PF Sbjct: 2990 GAHSAS*TLVRKAFRQGFYWPTALQDAQE*VQRCKACQFHAKQTHQPAQALQVIPLSWPF 3169 Query: 625 DVSGFDYMGPFPSSNG 672 V G D +GPF ++ G Sbjct: 3170 AV*GLDILGPFKAARG 3217 Score = 51.9 bits (107), Expect(6) = 2e-40 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREI 945 I RFGVP ++TD+G+ F +F + ASP HP+S+GQV+ +N EI Sbjct: 3323 ITSRFGVPNRIITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVKRANAEI 3490 Score = 43.2 bits (88), Expect(6) = 2e-40 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY H+ V++D TKW EA P D H+++K ++ Sbjct: 3218 GYQHLYVSIDKFTKWPEAYPVVKIDKHSALKFIR 3319 Score = 37.7 bits (76), Expect(6) = 2e-40 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R +A A +++ ++R+H + ++ R VGD VL Sbjct: 3725 DLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLQVGDLVL 3853 Score = 35.9 bits (72), Expect(6) = 2e-40 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +1 / +2 Query: 943 IKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +K ++ + +W +L LWA T G +P+ +VYG P EL Sbjct: 3500 LKTKTYNVLKKHGDSWLEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSEL 3661 Score = 32.7 bits (65), Expect(6) = 2e-40 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGPY + EV R G++++ +G Sbjct: 3884 KLSPMWEGPYKVIEVPRPGSVRLTMEDG 3967
>LOC_Os07g40050:12007.t03666:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7096 Score = 55.1 bits (114), Expect(7) = 2e-40 Identities = 25/53 (47%), Positives = 33/53 (62%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HPQS+GQVE +N Sbjct: 6422 IFCRFGLPHRIITDNGSQFISADFQDHCIRLGVKICFASVSHPQSNGQVERAN 6580 Score = 45.1 bits (92), Expect(7) = 2e-40 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +1 / +1 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 ++ E G + AG K + GF+WPT KDA V C+ CQ Sbjct: 6067 DIHEEICGSHAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQ 6201 Score = 39.6 bits (80), Expect(7) = 2e-40 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6984 KLSPKWEGPYTITQVLRPGAFKIADGDG 7067 Score = 39.1 bits (79), Expect(7) = 2e-40 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 6317 GYRFLFVAIDKFTKWIEATPTGEIKADDAIKFIK 6418 Score = 38.6 bits (78), Expect(7) = 2e-40 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 6638 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 6772 Score = 31.8 bits (63), Expect(7) = 2e-40 Identities = 10/25 (40%), Positives = 19/25 (76%) Frame = +1 / +3 Query: 1231 FKEKVKRWHDKRIQKREFNVGDYVL 1305 +++ ++ +H KRI+ R ++GDYVL Sbjct: 6879 YQQALRCYHKKRIRARTLSIGDYVL 6953 Score = 25.4 bits (49), Expect(7) = 2e-40 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +2 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 6263 PFSCWGLDILGPFPRG*G 6316 Score = 29.0 bits (57), Expect(2) = 2.3 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ + EP SV+ G PNL NM ++++ Sbjct: 6567 TCPLL*G*ETEAKQILTPSLMQ*SWKSALINWEPLSVMIR*GNPNLQNMPLMNLI 6403 Score = 23.1 bits (44), Expect(2) = 2.3 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -3 / -2 Query: 731 VGIASTHLVT*STAT 687 VG+AS HLV S AT Sbjct: 6378 VGVASIHLVNLSIAT 6334
>LOC_Os08g25970:12008.t02363:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6226 Score = 60.6 bits (126), Expect(6) = 4e-40 Identities = 27/76 (35%), Positives = 34/76 (44%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 5081 GSHAAGRTLVGKAFRQGFFWPTALKDACDIVQRCEACQFHSKHTKLPAQALQTIPLTWPF 5260 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5261 SCWGLDILGPFPRG*G 5308 Score = 48.7 bits (100), Expect(6) = 4e-40 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+ Q+E +N Sbjct: 5414 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKIYFASVSHPQSNEQIERAN 5572 Score = 41.4 bits (84), Expect(6) = 4e-40 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EAIPT +IK +K Sbjct: 5309 GYKFLFVAIDKFTKWIEAIPTGEIKAANAIKFIK 5410 Score = 38.6 bits (78), Expect(6) = 4e-40 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + G Sbjct: 5974 KLSPKWEGPYTITQVLRPGAFKIADGNG 6057 Score = 36.3 bits (73), Expect(6) = 4e-40 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIK 1131 W +L LWA T +P+ +VYG P EL H++ A K Sbjct: 5636 WVKELPSVLWAIRTTPTTSNKETPFFLVYGSEAMLPSELRHQSTRAQK 5779 Score = 31.3 bits (62), Expect(6) = 4e-40 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREF 1284 D++ L+E R + A +++ ++R+H+KRI+ F Sbjct: 5816 DVNLLEEHRERVAVRAATYQQALRRYHEKRIRDAYF 5923
>LOC_Os11g19110:12011.t01680:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7550 Score = 54.2 bits (112), Expect(6) = 5e-40 Identities = 25/76 (32%), Positives = 31/76 (40%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 6519 GSHAAGCTLVGKAFRQGFFWPTALKDACDMVQRCEACQSHSKHTKLPAQALQTIPLT*PF 6698 Query: 625 DVSGFDYMGPFPSSNG 672 D GPF G Sbjct: 6699 SCWALDIFGPFLRGQG 6746 Score = 46.9 bits (96), Expect(6) = 5e-40 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V S HPQS+G VE +N Sbjct: 6852 IFCRYGLPHRIITDNGSQFISADFQDCCVGLGVKICFVSVSHPQSNG*VERAN 7010 Score = 39.6 bits (80), Expect(6) = 5e-40 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 7068 KKWVEELPSVLWAVRTTPTTSNNETPFFLVYGSEAMLPTELRHQS 7202 Score = 39.6 bits (80), Expect(6) = 5e-40 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 7413 KLSPKWEGPYTITQVLRPGAFKIADGDG 7496 Score = 38.2 bits (77), Expect(6) = 5e-40 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + +A+D TKW+EA PT +IK +K Sbjct: 6747 GYKFLFMAIDKFTKWIEATPTGEIKADNAIKFIK 6848 Score = 38.2 bits (77), Expect(6) = 5e-40 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A ++ + R+H+KRI+ R + GDYVL Sbjct: 7254 DVNLLEEHRERVAVRAASYQLALHRYHEKRIRVRILSSGDYVL 7382
>LOC_Os02g47260:12002.t04311:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 55.1 bits (114), Expect(6) = 5e-40 Identities = 26/76 (34%), Positives = 32/76 (42%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K GF+ PT KDA V C+ CQ TK + + PF Sbjct: 2357 GSHAAGQTLVGKAF*QGFF*PTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 2536 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 2537 SCCGLDILGPFPRGQG 2584 Score = 52.4 bits (108), Expect(6) = 5e-40 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2690 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 2848 Score = 44.6 bits (91), Expect(6) = 5e-40 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 3092 DVNLLEEHRERVAVRATSYQQALRRYHEKRIRARILSIGDYVL 3220 Score = 41.8 bits (85), Expect(6) = 5e-40 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK +K Sbjct: 2585 GYKFLFVAIDKFTKWIEAVPTGEIQADNAIKFIK 2686 Score = 37.7 bits (76), Expect(6) = 5e-40 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2906 KKWVEELPSVLWAVCTTPTTSNKETPFFLVYGSEAMLPSELRHQS 3040 Score = 24.9 bits (48), Expect(6) = 5e-40 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVI 1374 +L KWEGPY I Sbjct: 3251 KLSPKWEGPYTI 3286
>LOC_Os06g44730:12006.t04160:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3525 Score = 63.4 bits (132), Expect(5) = 6e-40 Identities = 27/76 (35%), Positives = 35/76 (46%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT+ KDA V C+ CQ TK + + PF Sbjct: 2644 GSHAAGRTLVGKAFRQGFFWPTVLKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 2823 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 2824 SCWGLDILGPFPRGQG 2871 Score = 52.4 bits (108), Expect(5) = 6e-40 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2977 IFCRYGLPHRIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQVERAN 3135 Score = 44.6 bits (91), Expect(5) = 6e-40 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 3379 DVNLLEEHRERVAVRATSYQQALRRYHEKRIRARILSIGDYVL 3507 Score = 41.4 bits (84), Expect(5) = 6e-40 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK +K Sbjct: 2872 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIK 2973 Score = 37.7 bits (76), Expect(5) = 6e-40 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +1 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 3193 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPNELRHQS 3327
>LOC_Os08g22620:12008.t02037:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4698 Score = 54.2 bits (112), Expect(7) = 8e-40 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G FR + + AS HP S+GQVE +N Sbjct: 4000 IVHRFGVPNRIITDNGTQFTGGAFRDFCEDFGIKICYASMAHPMSNGQVERAN 4158 Score = 45.5 bits (93), Expect(7) = 8e-40 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +1 / +1 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 ++ F G + A K + GF+WPT DA K V +C++CQ Sbjct: 3646 DIHFGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEDCQ 3780 Score = 38.2 bits (77), Expect(7) = 8e-40 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 4222 WVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEMEFES 4350 Score = 36.8 bits (74), Expect(7) = 8e-40 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 3895 GYTHLFVAIDKFSKWIEAKP 3954 Score = 36.3 bits (73), Expect(7) = 8e-40 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + + R+H++ ++ R F VGD VL Sbjct: 4363 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLHRYHNRNVRSRAFLVGDLVL 4530 Score = 33.6 bits (67), Expect(7) = 8e-40 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 4561 KLSPLWEGPFIIAEVTRPGSYRLKREDG 4644 Score = 28.1 bits (55), Expect(7) = 8e-40 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ + G+++R E+G+ L K Sbjct: 3547 RLYIIHETELYKKSLSGILQRCVSLEEGRQLLK 3645
>LOC_Os06g31990:12006.t02897:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 6525 Score = 140 bits (300), Expect(3) = 8e-40 Identities = 52/101 (51%), Positives = 72/101 (71%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT++ D ++FV C CQ+ G IT R MP+ Y+L ++ Sbjct: 5163 YGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFVRRCTSCQKHGGITARDAMPLTYNLQVEL 5342 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNAD 744 FDV G ++MGPFP S ++LVAVDYV+KWVEA+P + AD Sbjct: 5343 FDVWGINFMGPFPKSYDCKYILVAVDYVSKWVEAMPCRAAD 5465 Score = 34.5 bits (69), Expect(3) = 8e-40 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ + R + W P+LY+ DG++RR ++G Sbjct: 5016 ENKKRLIYKSRGHLWYAPYLYRVCSDGLLRRCVPVDKG 5129 Score = 29.5 bits (58), Expect(3) = 8e-40 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 / +3 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++VA ++PP Sbjct: 4938 LLKVIDSDSWYATIVNFMVAGHVPP 5012 Score = 45.1 bits (92), Expect(2) = 4e-07 Identities = 23/41 (56%), Positives = 27/41 (65%) Frame = -3 / -3 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+ + + G GP+ P TSN Sbjct: 5464 SAALHGIASTHLDT*STATRIYLQS*DFGKGPMKLMPHTSN 5342 Score = 30.9 bits (61), Expect(2) = 4e-07 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = -3 / -3 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDCNTLWAVLSPAWYPP 444 GI+ R VI P W +TN S VGQ P C VL+ PP Sbjct: 5314 GIASRAVIPPCFWQLVHLRTNSFVSSYIVGQKNPLCQIFACVLNAP**PP 5165
>LOC_Os11g27180:12011.t02333:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3997 Score = 47.3 bits (97), Expect(8) = 1e-39 Identities = 17/43 (39%), Positives = 30/43 (69%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRIQ R ++GDYVL Sbjct: 3701 DVNLLEEHRERVAVRAASYQQALRRYHEKRIQARTLSIGDYVL 3829 Score = 40.9 bits (83), Expect(8) = 1e-39 Identities = 17/41 (41%), Positives = 20/41 (48%) Frame = +1 / +3 Query: 457 AGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITK 579 AG K + GF+WPT KDA V C+ CQ TK Sbjct: 2979 AGQTLVGKAFRQGFFWPTGLKDACDMVQRCEACQFHNKHTK 3101 Score = 40.0 bits (81), Expect(8) = 1e-39 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 3195 GYRFLFVAIDKFTKWIEATPTGEIKSDNAIKFIK 3296 Score = 39.6 bits (80), Expect(8) = 1e-39 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 3860 KLSPKWEGPYTITQVLRPGAFKIASGDG 3943 Score = 37.7 bits (76), Expect(8) = 1e-39 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ ++YG P EL H++ Sbjct: 3515 KKWVEELPSILWAVRTTPTTSNKETPFFLIYGSEAMLPTELRHQS 3649 Score = 30.4 bits (60), Expect(8) = 1e-39 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 / +2 Query: 832 FIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 FI F+ + V AS HPQS+GQVE +N Sbjct: 3353 FISADFQDYCIRLGVKICFASVSHPQSNGQVERAN 3457 Score = 27.6 bits (54), Expect(8) = 1e-39 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGS 828 IF RFG+P ++TD+GS Sbjct: 3300 IFCRFGLPHGIITDNGS 3350 Score = 25.4 bits (49), Expect(8) = 1e-39 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +3 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 3141 PFSCWGLDILGPFPRG*G 3194
>LOC_Os07g30040:12007.t02694:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7547 Score = 46.9 bits (96), Expect(7) = 1e-39 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI+ F+ + V AS PQS+G VE +N Sbjct: 6849 IFCRFGLPHRIITDNGS*FINADFQDYCIRLGVKICFASVSQPQSNG*VERAN 7007 Score = 41.8 bits (85), Expect(7) = 1e-39 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITK 579 G + AG K + GF+WPT KDA V C CQ TK Sbjct: 6516 GSHAAGRTLVGKAFRQGFFWPTALKDACNMVQRC*ACQFHSKHTK 6650 Score = 41.8 bits (85), Expect(7) = 1e-39 Identities = 14/42 (33%), Positives = 29/42 (69%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 D++ L+E R + A +++ ++R+H+KRI+ R ++GDY+ Sbjct: 7251 DVNLLEEHRERVAIQATDYQQALRRYHEKRIRARTLSIGDYI 7376 Score = 39.6 bits (80), Expect(7) = 1e-39 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 7410 KLSPKWEGPYTITQVLRPGAFKIADGDG 7493 Score = 38.6 bits (78), Expect(7) = 1e-39 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+E PT + +IK +K Sbjct: 6744 GYKFLFVAIDKFTKWIEVTPTGEIKANNAIKFIK 6845 Score = 36.3 bits (73), Expect(7) = 1e-39 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LW T +P+ +VYG P EL H++ Sbjct: 7065 KKWVEELPSVLWVARTTPTTSNKETPFFLVYGSEAMLPTELRHQS 7199 Score = 27.2 bits (53), Expect(7) = 1e-39 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +1 / +3 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF G D +GPFP G Sbjct: 6690 PFSCWGLDILGPFPRGQG 6743
>LOC_Os04g29650:12004.t02655:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4717 Score = 53.3 bits (110), Expect(7) = 1e-39 Identities = 24/71 (33%), Positives = 32/71 (45%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GF+WP DA K V +C+ CQ T + L+ PF Sbjct: 3686 GNHTAARTIIGKAYRQGFFWPIAVTDADKIVRTCEGCQFFARQTHLPAQELQTILLSWPF 3865 Query: 625 DVSGFDYMGPF 657 V G D +GPF Sbjct: 3866 AVWGLDMVGPF 3898 Score = 52.4 bits (108), Expect(7) = 1e-39 Identities = 21/53 (39%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++ D+G+ F G+F+ + + AS HP S+GQVE +N Sbjct: 4019 IVHRFGVPNQIINDNGTQFTGGIFKDFCEDFGIKICYASVAHPMSNGQVERAN 4177 Score = 39.1 bits (79), Expect(7) = 1e-39 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + GE + D++ L++ R A + + + + R+H++ ++ R F VGD VL Sbjct: 4382 NFSEERYGEDRVDDLNRLEDAREAALIQSARYLQGMSRYHNRNVRSRAFLVGDLVL 4549 Score = 37.3 bits (75), Expect(7) = 1e-39 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VAVD +KW+EA P Sbjct: 3914 GYTHLFVAVDKFSKWIEAKP 3973 Score = 34.1 bits (68), Expect(7) = 1e-39 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 4580 KLSPLWEGPFIISEVTRPGSYRLKREDG 4663 Score = 29.5 bits (58), Expect(7) = 1e-39 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W L L + T G SP+ +VYG P E+E ++ Sbjct: 4241 WVE*LPSVLLSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 4369 Score = 26.7 bits (52), Expect(7) = 1e-39 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQKCHSKPTE 448 R Y + LYK+ G+++R E+G+ L K E Sbjct: 3541 RLYVIHETELYKKSPSGILQRCVSLEEGRQLLKVSGATVE 3660
>LOC_Os09g03520:12009.t00249:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 411 Score = 165 bits (355), Expect = 1e-39 Identities = 65/136 (47%), Positives = 88/136 (64%) Frame = +1 / +1 Query: 511 LFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGYTHVLV 690 ++ D ++FV C CQ+ G I R MP+ +L ++ FDV G D+MGPFP S + LV Sbjct: 1 MYDDTKEFVRICTSCQKHGGIPARDAMPLTNNLQVELFDVWGIDFMGPFPKSYACEYSLV 180 Query: 691 AVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAKY 870 AVDYV+KWVEA+P + D + +M +IFPRFG PR ++D GSHFI FRK L + Sbjct: 181 AVDYVSKWVEAMPCRAVDAKHARRMFHEIIFPRFGTPRMAISDGGSHFIDKTFRKFLQEL 360 Query: 871 DVNHRVASPYHPQSSG 918 H +A+PYHPQ+SG Sbjct: 361 GAQHNIATPYHPQTSG 408 Score = 58.3 bits (121), Expect = 2e-07 Identities = 41/99 (41%), Positives = 48/99 (48%) Frame = -3 / -2 Query: 917 PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SA 738 PL G* G A L RK MK +P S+I G P G + +I S Sbjct: 407 PLVWG*YGVAMLC*APSSCKNFRKVLSMK*DPPSLIAIRGVPKRGKIISWNIRRACLAST 228 Query: 737 FLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 L GIASTHL T*STAT+ + G GP+ S P TSN Sbjct: 227 ALHGIASTHLDT*STATRLYSQA*DFGKGPMKSIPHTSN 111
>LOC_Os02g22360:12002.t02024:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 636 Score = 135 bits (290), Expect(3) = 1e-39 Identities = 59/134 (44%), Positives = 78/134 (58%) Frame = +1 / +1 Query: 448 GYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFD 627 G H G H + ++ DA++F+ C CQ+ G IT R MP+ Y+L ++ FD Sbjct: 232 GDHYGAFKTHAKIWQSGFFWPTMYDAKEFIRRCTRCQKHGGITARDAMPLTYNLQVELFD 411 Query: 628 VSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRY 807 V G D+M PFP S + LVAVDYV+KWVEAIP K AD + M + FP FG PR Sbjct: 412 VLGIDFMRPFPKSFECEYNLVAVDYVSKWVEAIPCKAADAKHARWMFHEITFPHFGTPRM 591 Query: 808 LMTDDGSHFIHGVF 849 +++D GSHFI F Sbjct: 592 VISDGGSHFIDKTF 633 Score = 34.1 bits (68), Expect(3) = 1e-39 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ + S PWYA N++VA ++PP Sbjct: 4 LLKVTDSDPWYATIVNFMVACHVPP 78 Score = 33.6 bits (67), Expect(3) = 1e-39 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ ++ R + WD P+LY+ D ++RR +G Sbjct: 82 ENKKRVIYESRMHLWDLPYLYRVCSDVLLRRCVPVAEG 195 Score = 55.6 bits (115), Expect = 2e-06 Identities = 32/72 (44%), Positives = 40/72 (55%) Frame = -3 / -2 Query: 836 MKCEPSSVIKYLGTPNLGNMTYLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELG 657 MK +P S+I G P G + +I SA L GIASTHL T*STAT+ + + G Sbjct: 620 MK*DPPSLITIRGVPK*GKVISWNIQRACLASAALHGIASTHLDT*STATRLYSHSKDFG 441 Query: 656 NGPI*SKPETSN 621 G + S P TSN Sbjct: 440 KGRMKSMPNTSN 405 Score = 36.8 bits (74), Expect(2) = 0.22 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLF 516 YG ++ +T K+ QSGF+WPT++ Sbjct: 229 YGDHYGAFKTHAKIWQSGFFWPTMY 303 Score = 23.1 bits (44), Expect(2) = 0.22 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +3 / +1 Query: 2055 DVEGVDFLQPF 2087 DV G+DF++PF Sbjct: 409 DVLGIDFMRPF 441
>LOC_Os04g19210:12004.t01661:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2690 Score = 128 bits (274), Expect(3) = 3e-39 Identities = 50/108 (46%), Positives = 70/108 (64%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG ++ RT K+ Q GF+WPT+++D+++FV CQR G IT R MP+ Y+L ++ Sbjct: 2358 YGRHYVAFRTQAKIWQCGFFWPTMYEDSKEFVRRYPSCQRQGGITARDAMPLTYNLQVEI 2537 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKM 765 FDV G D+M PFP ++LVAVDYV+KWVEA+P D + KM Sbjct: 2538 FDVWGIDFMRPFPKCRNCENILVAVDYVSKWVEAMPCSAVDAKHAKKM 2681 Score = 40.0 bits (81), Expect(3) = 3e-39 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 / +3 Query: 230 SAPWYADYANYIVAKYIPP 286 S PWYA+ NY+V+KYIPP Sbjct: 2151 SKPWYANIVNYMVSKYIPP 2207 Score = 34.1 bits (68), Expect(3) = 3e-39 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = +2 / +3 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + ++ ++ R + WD+ +LY DG++RR E+G Sbjct: 2211 ENQRMLKYESRRHIWDEAYLYTVCSDGLLRRCVPTEEG 2324 Score = 47.8 bits (98), Expect(4) = 8e-11 Identities = 27/51 (52%), Positives = 31/51 (60%) Frame = -3 / -2 Query: 773 YLSILMEVW*SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 Y++I + + S L GIASTHL T*STATK LG G I S P TSN Sbjct: 2689 YVNIFLACFASTALHGIASTHLET*STATKIFSQLRHLGKGLIKSIPHTSN 2537 Score = 28.1 bits (55), Expect(4) = 8e-11 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = -1 / -1 Query: 289 TGWYVFGYDIVCIIGIPR 236 +GWYV + +V +GIPR Sbjct: 2210 SGWYVL*HHVVYYVGIPR 2157 Score = 23.5 bits (45), Expect(4) = 8e-11 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -3 / -2 Query: 593 GIS*RLVIFPILWHSSQDKTNLRASLKRVGQ*KPDC 486 GI+ R VI P L TN S VGQ KP C Sbjct: 2509 GIASRAVIPPCL*QLGYLLTNSFESSYIVGQKKPHC 2402 Score = 22.1 bits (42), Expect(4) = 8e-11 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = -1 / -1 Query: 448 LRRLRMTLLQDLSLFMFSHTSNNTIYSFLIKVRIIPKVVSQIKEEFLLLLIG 293 +RR SLF + +S TI + I+V +IP + + + + L+ G Sbjct: 2360 IRRRMALFYDHKSLFSWYASS*QTIRADCIQVCLIPYMTATLVFQHSLIFSG 2205 Score = 32.2 bits (64), Expect(2) = 1.1 Identities = 23/81 (28%), Positives = 39/81 (48%) Frame = +3 / +2 Query: 483 IAIRFLLAHSLQGCP*VCLVL*RMPKNREYH*ASGNAYELFTCH*TI*CLGL*LYGTIPE 662 +A+ FLLA +++G +C + ++ + R + + NA + I C+G *LY T + Sbjct: 2399 LAMWFLLADNVRGLEGICQKIPKLSEARRNYCSRCNAPHIQPTSRDIRCVGY*LYETFSQ 2578 Query: 663 FQWVHSRLSCCGLRH*VGRGY 725 + L *VG GY Sbjct: 2579 VP*LREYFGGSRLCL*VG*GY 2641 Score = 27.2 bits (53), Expect(2) = 1.1 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = +1 / +2 Query: 235 TVVCRLCKLYRSQIHTTQ 288 TVVC+ KL+ ++HTTQ Sbjct: 2156 TVVCQHSKLHGVKVHTTQ 2209
>LOC_Os12g37340:12012.t03414:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 55.1 bits (114), Expect(7) = 3e-39 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCENFGIKICYASVAHPMSNGQVERAN 5559 Score = 44.6 bits (91), Expect(7) = 3e-39 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 YG + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 YGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 3e-39 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 3e-39 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 3e-39 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 3e-39 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 26.3 bits (51), Expect(7) = 3e-39 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os10g13980:12010.t01121:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 55.1 bits (114), Expect(7) = 3e-39 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N I + Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGI 5577 Query: 958 QKIVNRSRKNWSSK 999 + V K+++ K Sbjct: 5578 KARVFDRLKSYAGK 5619 Score = 41.4 bits (84), Expect(7) = 3e-39 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 3e-39 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + GE + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYGEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 37.7 bits (76), Expect(7) = 3e-39 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 3e-39 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 34.1 bits (68), Expect(7) = 3e-39 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 25.8 bits (50), Expect(7) = 3e-39 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVLHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os04g17970:12004.t01544:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 979 Score = 134 bits (287), Expect(3) = 4e-39 Identities = 50/98 (51%), Positives = 70/98 (71%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ SGF+WP+++ D ++FV C CQ+ G IT R MP+ Y+L ++ Sbjct: 629 YGGHYGAFRTHAKI**SGFFWPSMYDDTKEFVRRCTSCQKHGGITARDAMPLTYNLQVEL 808 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTK 735 FDV G D+MGPFP S ++LVAVDYV+KWVEA+P+K Sbjct: 809 FDVWGIDFMGPFPESYDCKYILVAVDYVSKWVEAMPSK 922 Score = 41.4 bits (84), Expect(3) = 4e-39 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ ++ R + WD P+LY+ DG++RR ++G Sbjct: 482 ENKKRLIYESRRHLWDAPYLYRVCSDGLLRRCVPVDEG 595 Score = 26.3 bits (51), Expect(3) = 4e-39 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 / +1 Query: 760 KMLK*VIFPRFGVPR 804 +M +IFPRFG PR Sbjct: 928 RMFPEIIFPRFGTPR 972 Score = 46.0 bits (94), Expect = 0.001 Identities = 22/38 (57%), Positives = 27/38 (71%) Frame = -3 / -2 Query: 734 LVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 L+GIASTHL T*STAT+ + + G GP+ S P TSN Sbjct: 921 LLGIASTHLDT*STATRIYLQS*DSGKGPMKSMPHTSN 808
>LOC_Os08g25190:12008.t02288:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8392 Score = 108 bits (230), Expect(5) = 5e-39 Identities = 45/149 (30%), Positives = 79/149 (53%) Frame = +1 / +2 Query: 688 VAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLAK 867 V+ + TKW EA+P KN H I + I RFG+P+ + TD G+ F+ + Sbjct: 5099 VSRSHFTKWAEAVPLKNMTHTEVIDFILKYIIHRFGIPQTITTDQGASFMSKEVKSFTES 5278 Query: 868 YDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPM 1047 Y + +S Y+ Q++GQ E SN+ + +++K + K W L +ALWA+ + Sbjct: 5279 YGIKLLSSSTYYAQANGQAESSNKTLLKLVKKKIEEHPKRWHEVLSEALWAHRISKHGAT 5458 Query: 1048 GMSPYKMVYGKACYFPLELEHKAYWAIKE 1134 ++P+++VYG+ P+E+ + IK+ Sbjct: 5459 KVTPFELVYGQEAILPVEVNLGSLRYIKQ 5545 Score = 47.8 bits (98), Expect(5) = 5e-39 Identities = 21/67 (31%), Positives = 30/67 (44%) Frame = +1 / +3 Query: 496 FYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMGPFPSSNGY 675 FYWP + D K+ C+ CQR GN+ +N + PF D++G S+ Sbjct: 4878 FYWPKMIDDCFKYYRGCEACQRFGNVQLAPAAVLNPIIKPWPFR**ALDFIGQIYPSSSK 5057 Query: 676 THVLVAV 696 H V V Sbjct: 5058 GHRFVLV 5078 Score = 29.5 bits (58), Expect(5) = 5e-39 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 / +2 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++ + F VGD V Sbjct: 5612 RLKALEEIEKEKKRVAKAYNKRVKAKLFQVGDLV 5713 Score = 25.4 bits (49), Expect(5) = 5e-39 Identities = 7/24 (29%), Positives = 15/24 (62%) Frame = +2 / +3 Query: 347 DPHLYKEGVDGVIRRVTEHEQGQI 418 D LY+ +DGV+ + + +Q ++ Sbjct: 4725 DEDLYRRNIDGVLLKCLDEDQSKV 4796 Score = 25.4 bits (49), Expect(5) = 5e-39 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = +1 / +2 Query: 1336 GRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 G+ WEGPY + + R A + +G Sbjct: 5756 GKWSPSWEGPYRVCGIVRGNAYFLETLQG 5842
>LOC_Os01g51820:12001.t04612:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6879 Score = 121 bits (258), Expect(3) = 7e-39 Identities = 50/140 (35%), Positives = 81/140 (57%) Frame = +1 / +1 Query: 685 LVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIHGVFRKMLA 864 +VA DY TKWVEAIP K D +I+ ++ I RFG+P+ + TD GS F+ F + Sbjct: 6118 MVATDYFTKWVEAIPLKKVDSVDAIQFVQEHIIYRFGIPQTITTDQGSIFVSDEFVRFAD 6297 Query: 865 KYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNP 1044 + +SPY+ Q++GQ E SN+ + ++++ ++ + W ++L ALW+Y A Sbjct: 6298 SVGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISNYPRQWHTRLAKALWSYRMACHGS 6477 Query: 1045 MGMSPYKMVYGKACYFPLEL 1104 + + PYK+VYG P E+ Sbjct: 6478 IQVPPYKLVYGHEVVLPWEV 6537 Score = 45.1 bits (92), Expect(3) = 7e-39 Identities = 17/66 (25%), Positives = 33/66 (50%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + + + + ++G++WPT+ +D ++ C +CQ+ G I + MN + PF Sbjct: 5891 GTHQSAHKMKWLLRRAGYFWPTMLEDCFRYYKGCQDCQKFGAIQRVPASAMNPIIKPWPF 6070 Query: 625 DVSGFD 642 G D Sbjct: 6071 RGWGID 6088 Score = 35.0 bits (70), Expect(3) = 7e-39 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +1 / +1 Query: 1189 LDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 L +WR +A KE+V R H+K+I ++F+ G+ V Sbjct: 6622 LVQWRLRALAKVTKDKERVARHHNKKIVPKDFSEGELV 6735
>LOC_Os03g56566:12003.t04915:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1408 Score = 57.0 bits (118), Expect(6) = 9e-39 Identities = 25/79 (31%), Positives = 35/79 (44%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GF+WPT DA K V +C+ CQ T + + +PF Sbjct: 376 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQTHLPAQELQTIPLSRPF 555 Query: 625 DVSGFDYMGPFPSSNGYTH 681 V G D +GPF + H Sbjct: 556 AVWGLDMVGPFKRGSRRLH 612 Score = 51.5 bits (106), Expect(6) = 9e-39 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 710 IVHRFGVPNRIITDNGTQFTGGAFKDFCEDFCIKICYASVAHPMSNGQVEHAN 868 Score = 37.7 bits (76), Expect(6) = 9e-39 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 932 WVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 1060 Score = 37.7 bits (76), Expect(6) = 9e-39 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 1073 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNVRSRAFLVGDLVL 1240 Score = 36.8 bits (74), Expect(6) = 9e-39 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 605 GYTHLFVAIDKFSKWIEAKP 664 Score = 31.8 bits (63), Expect(6) = 9e-39 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV + G+ ++ +G Sbjct: 1271 KLSPLWEGPFIIAEVTQPGSYRLKREDG 1354
>LOC_Os07g44499:12007.t04089:unspliced-genomic peroxidase 56 precursor, putative, expressed| Length = 12606 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 6375 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 6533 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 6042 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 6155 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 6597 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 6725 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 6270 GYTHLFVAIDKFSKWIEAKP 6329 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 6738 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 6905 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 6936 KLSPLWEGPFIISEVTRPGSYRLKREDG 7019 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 5928 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 6020 Score = 33.6 bits (67), Expect(2) = 0.063 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -3 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 6445 KTPPVNCVPLSVIIRLGTPNLCTM 6374 Score = 24.0 bits (46), Expect(2) = 0.063 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -3 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 6268 PTAFLNGPTMSSPQTANG 6215
>LOC_Os08g29540:12008.t02709:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5413 Score = 56.5 bits (117), Expect(6) = 1e-38 Identities = 27/76 (35%), Positives = 33/76 (43%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF WPT KDA V C+ Q TK + + PF Sbjct: 2820 GLHAAGRTLVGKAFRQGFLWPTALKDACDMVQRCEAFQFHSKHTKLPAQALQTIPLTWPF 2999 Query: 625 DVSGFDYMGPFPSSNG 672 GFD +GPFP G Sbjct: 3000 SCWGFDILGPFPRGQG 3047 Score = 44.1 bits (90), Expect(6) = 1e-38 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQ 921 IF R+G+P ++TD+GS FI F+ V AS HPQS+G+ Sbjct: 3153 IFCRYGLPHCIITDNGSQFISADFQDYYIGLGVKICFASVSHPQSNGR 3296 Score = 39.6 bits (80), Expect(6) = 1e-38 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 3713 KLSPKWEGPYTITQVLRPGAFKIADGDG 3796 Score = 39.1 bits (79), Expect(6) = 1e-38 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT ++K +K Sbjct: 3048 GYRFLFVAIDKFTKWIEATPTGEIKADNTVKFIK 3149 Score = 38.6 bits (78), Expect(6) = 1e-38 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL+H++ Sbjct: 3368 KKWVEELPSVLWAMRTTPTTSNKETPFFLVYGSEAMLPNELQHQS 3502 Score = 34.1 bits (68), Expect(6) = 1e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ + +H+KRI R ++G YVL Sbjct: 3554 DVNLLEEHRERVAVRAASYQQAFR*YHEKRI*ARTLSIGYYVL 3682
>LOC_Os07g46260:12007.t04262:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7328 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 6630 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 6788 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 6297 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 6410 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 6852 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 6980 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 6525 GYTHLFVAIDKFSKWIEAKP 6584 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 6993 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 7160 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 7191 KLSPLWEGPFIISEVTRPGSYRLKREDG 7274 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 6183 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 6275 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 6700 KTPPVNCVPLSVIIRLGTPNLCTM 6629 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 6523 PTAFLNGPTMSSPQTANG 6470
>LOC_Os04g07020:12004.t00579:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os12g33330:12012.t03024:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5468 KTPPVNCVPLSVIIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os11g41760:12011.t03711:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os08g24990:12008.t02269:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEIRKAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os08g15570:12008.t01431:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os08g13750:12008.t01251:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5468 KTPPVNCVPLSVIIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os07g47740:12007.t04408:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os02g07540:12002.t00651:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os01g45210:12001.t03979:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 1e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 1e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 1e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 1e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 1e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 1e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os11g20420:12011.t01811:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2509 Score = 52.8 bits (109), Expect(6) = 1e-38 Identities = 25/76 (32%), Positives = 33/76 (43%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C+ Q T+ + + PF Sbjct: 1479 GSHAAGRTLVGKAFRQGFFWPTARKDACDMVQRCEAFQFHSKHTRLPAQALQTIPLTWPF 1658 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 1659 LCWGLDILGPFPRGQG 1706 Score = 45.1 bits (92), Expect(6) = 1e-38 Identities = 21/53 (39%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+ +P ++ D+GS FI+ F+ V AS HPQS+GQV+ +N Sbjct: 1811 IFCRYRLPHRIIIDNGSQFINADFQDYCIGLGVKICFASVSHPQSNGQVKRAN 1969 Score = 40.9 bits (83), Expect(6) = 1e-38 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R + DYVL Sbjct: 2213 DVNLLEEHRERVVVRAASYQQALRRYHEKRIRARTLLIDDYVL 2341 Score = 40.0 bits (81), Expect(6) = 1e-38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK +K Sbjct: 1707 GYKFLFVAIDKFTKWIEAMPTGEIKADDAIKFIK 1808 Score = 38.2 bits (77), Expect(6) = 1e-38 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I + R GA KI + +G Sbjct: 2372 KLSPKWEGPYTITQFLRPGAFKIADNDG 2455 Score = 35.0 bits (70), Expect(6) = 1e-38 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2027 KKWVEELPSDLWAVRTTPTTFNKETPFFLVYGS*AMLPTELRHQS 2161
>LOC_Os02g28780:12002.t02572:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5452 Score = 55.1 bits (114), Expect(8) = 1e-38 Identities = 22/50 (44%), Positives = 32/50 (64%) Frame = +1 / +2 Query: 787 RFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 RFGVP ++TD+G+ F GVF+ + + + AS HP S+GQVE +N Sbjct: 4763 RFGVPNRIITDNGTQFTGGVFKDLCEDFGIKICYASVAHPMSNGQVERAN 4912 Score = 44.1 bits (90), Expect(8) = 1e-38 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E W+ D++ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5117 NFSEERYREDWVDDLNRLEEVREAALIQSARYLQGMRRYHNRNVRSRAFLVGDLVL 5284 Score = 41.4 bits (84), Expect(8) = 1e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4421 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4534 Score = 33.1 bits (66), Expect(8) = 1e-38 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VAV+ + W+EA P Sbjct: 4649 GYTHLFVAVEKFSNWIEAKP 4708 Score = 31.8 bits (63), Expect(8) = 1e-38 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L L + T G SP+ +VYG P E+E ++ Sbjct: 4976 WVEQLPSVLCSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5104 Score = 30.9 bits (61), Expect(8) = 1e-38 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WE P++I EV R G+ ++ +G Sbjct: 5315 KLSPLWEEPFIISEVIRPGSYRLKREDG 5398 Score = 26.3 bits (51), Expect(8) = 1e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4301 RLYVIHETELYKKSPSGILQRCVSLEEGRQLLK 4399 Score = 22.1 bits (42), Expect(8) = 1e-38 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +1 / +2 Query: 619 PFDVSGFDYMGPFPSSNG 672 PF V G D + PF + G Sbjct: 4595 PFSVWGLDMVSPFKKAVG 4648
>LOC_Os06g32870:12006.t02984:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 2e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 2e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.4 bits (71), Expect(7) = 2e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5800 DLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 2e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os07g06365:12007.t00517:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.2 bits (112), Expect(7) = 2e-38 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = +1 / +1 Query: 787 RFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5407 RFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 2e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 2e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 2e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLYTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os07g06274:12007.t00509:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.2 bits (112), Expect(7) = 2e-38 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = +1 / +1 Query: 787 RFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5407 RFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 2e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 2e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 2e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLYTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os08g08770:12008.t00763:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6087 Score = 54.7 bits (113), Expect(7) = 2e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5389 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5547 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5056 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5169 Score = 39.6 bits (80), Expect(7) = 2e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5611 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5739 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5284 GYTHLFVAIDKFSKWIEAKP 5343 Score = 35.4 bits (71), Expect(7) = 2e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5791 DLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5919 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5950 KLSPLWEGPFIISEVTRPGSYRLKREDG 6033 Score = 26.3 bits (51), Expect(7) = 2e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4942 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5034 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5459 KTPPVNCVPLSVMIRLGTPNLCTM 5388 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5282 PTAFLNGPTMSSPQTANG 5229
>LOC_Os10g12226:12010.t01007:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2490 Score = 54.7 bits (113), Expect(7) = 2e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 1792 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 1950 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1459 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1572 Score = 37.7 bits (76), Expect(7) = 2e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2014 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 2142 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 1687 GYTHLFVAIDKFSKWIEAKP 1746 Score = 35.9 bits (72), Expect(7) = 2e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2155 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 2322 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2353 KLSPLWEGPFIISEVTRPGSYRLKREDG 2436 Score = 27.6 bits (54), Expect(7) = 2e-38 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R EQG+ L K Sbjct: 1345 YVMHESELYKKSPSGILQRCVSLEQGRQLLK 1437 Score = 30.9 bits (61), Expect(2) = 0.42 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPN 789 KTP + C P SVI LGTPN Sbjct: 1862 KTPPVNCVPLSVIIRLGTPN 1803 Score = 24.0 bits (46), Expect(2) = 0.42 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 1685 PTAFLNGPTMSSPQTANG 1632
>LOC_Os06g32220:12006.t02920:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 2053 Score = 137 bits (294), Expect(3) = 2e-38 Identities = 51/101 (50%), Positives = 70/101 (69%) Frame = +1 / +1 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WPT++ D ++F C CQ+ G IT R MP+ Y+L ++ Sbjct: 691 YGGHYGAFRTHAKIWQSGFFWPTMYDDTKEFFRRCTSCQKHGGITARDAMPLTYNLQVEL 870 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNAD 744 FDV G +MGPFP S ++LVAVDYV+KWVEA+P + AD Sbjct: 871 FDVWGISFMGPFPKSYDCKYILVAVDYVSKWVEAMPCRAAD 993 Score = 34.5 bits (69), Expect(3) = 2e-38 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +2 / +1 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ + R + W P+LY+ DG++RR ++G Sbjct: 544 ENKKRLIYKSRGHLWYAPYLYRVCSDGLLRRCVPVDKG 657 Score = 27.6 bits (54), Expect(3) = 2e-38 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = +2 / +1 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++V ++PP Sbjct: 466 LLKVIDSDSWYATIVNFMVVGHVPP 540 Score = 45.1 bits (92), Expect = 0.002 Identities = 23/41 (56%), Positives = 27/41 (65%) Frame = -3 / -3 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+ + + G GP+ P TSN Sbjct: 992 SAALHGIASTHLDT*STATRIYLQS*DFGKGPMKLMPHTSN 870
>LOC_Os12g27710:12012.t02482:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 2e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 2e-38 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +1 / +1 Query: 661 SSNGYTHVLVAVDYVTKWVEAIP 729 ++ GYTH+ VA+D +KW+EA P Sbjct: 5299 AAGGYTHLFVAIDKFSKWIEAKP 5367 Score = 37.7 bits (76), Expect(7) = 2e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.3 bits (73), Expect(7) = 2e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRMDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 25.8 bits (50), Expect(7) = 2e-38 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKRSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PAAFLNGPTMSSPQTANG 5253
>LOC_Os10g12270:12010.t01011:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3099 Score = 53.8 bits (111), Expect(7) = 2e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 2401 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2559 Score = 41.4 bits (84), Expect(7) = 2e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2181 Score = 37.7 bits (76), Expect(7) = 2e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2623 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 2751 Score = 36.8 bits (74), Expect(7) = 2e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2296 GYTHLFVAIDKFSKWIEAKP 2355 Score = 35.9 bits (72), Expect(7) = 2e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2764 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 2931 Score = 34.1 bits (68), Expect(7) = 2e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2962 KLSPLWEGPFIISEVTRPGSYRLKREDG 3045 Score = 28.1 bits (55), Expect(7) = 2e-38 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y D LYK+ G+++R E+G+ L K Sbjct: 1954 YVMHDAELYKKSPSGILQRCVSLEEGRQLLK 2046 Score = 31.8 bits (63), Expect(2) = 0.31 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2471 KTPPVNCLPLSVMIRLGTPNLCTM 2400 Score = 23.5 bits (45), Expect(2) = 0.31 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 / -2 Query: 656 NGPI*SKPETSNG 618 NGP S P+T+NG Sbjct: 2279 NGPTMSSPQTANG 2241
>LOC_Os05g33490:12005.t02944:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6194 Score = 62.9 bits (131), Expect(5) = 2e-38 Identities = 28/76 (36%), Positives = 33/76 (43%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G Y AG K + GF+WPT KDA V C+ CQ TK + + PF Sbjct: 5304 GSYAAGWTLVGKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 5483 Query: 625 DVSGFDYMGPFPSSNG 672 G D GPFP G Sbjct: 5484 SCWGLDIFGPFPRGQG 5531 Score = 51.9 bits (107), Expect(5) = 2e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQ+E +N Sbjct: 5637 IFCRYGLPHCIITDNGSQFISADFQDYCIGLGVKICFASVSHPQSNGQIERAN 5795 Score = 41.8 bits (85), Expect(5) = 2e-38 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++ DYVL Sbjct: 6039 DVNLLEEHRERVAVRAASYQQALRRYHEKRIRARILSISDYVL 6167 Score = 39.6 bits (80), Expect(5) = 2e-38 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK ++ Sbjct: 5532 GYRFLFVAIDKFTKWIEALPTGEIKADNAIKFIR 5633 Score = 37.7 bits (76), Expect(5) = 2e-38 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5853 KKWVEELPSVLWAVRTTPTTSNKKTPFFLVYGSEAMLPGELRHQS 5987
>LOC_Os11g45240:12011.t04052:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7955 Score = 54.7 bits (113), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 7257 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 7415 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 6924 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 7037 Score = 38.2 bits (77), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 7479 WVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFES 7607 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 7152 GYTHLFVAIDKFSKWIEAKP 7211 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 7620 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 7787 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 7818 KLSPLWEGPFIISEVTRPGSYRLKREDG 7901 Score = 26.3 bits (51), Expect(7) = 3e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 6810 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 6902 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 7327 KTPPVNCVPLSVMIRLGTPNLCTM 7256 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 7150 PTAFLNGPTMSSPQTANG 7097
>LOC_Os09g08870:12009.t00681:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 55.1 bits (114), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTSGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVRDAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 3e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4960 RLYVIHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5483 KTPLVNCVPLSVIIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os12g31190:12012.t02824:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +1 / +1 Query: 661 SSNGYTHVLVAVDYVTKWVEAIP 729 ++ GYTH+ VA+D +KW+EA P Sbjct: 5299 AAGGYTHLFVAIDKFSKWIEAKP 5367 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 25.8 bits (50), Expect(7) = 3e-38 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKRSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PAAFLNGPTMSSPQTANG 5253
>LOC_Os06g50270:12006.t04711:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 40.0 bits (81), Expect(7) = 3e-38 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA + V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADRIVRTCEGCQ 5193 Score = 39.6 bits (80), Expect(7) = 3e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 3e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5483 KTPPVNCVPLSVIIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os05g04980:12005.t00390:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 39.6 bits (80), Expect(7) = 3e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 35.4 bits (71), Expect(7) = 3e-38 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ +A+D +KW+EA P Sbjct: 5308 GYTHLFMAIDKFSKWIEAKP 5367 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 3e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5483 KTPPVNCVPLSVIIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os08g05120:12008.t00406:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 55.6 bits (115), Expect(7) = 3e-38 Identities = 28/74 (37%), Positives = 41/74 (55%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N I + Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGI 5580 Query: 958 QKIVNRSRKNWSSK 999 + V K ++SK Sbjct: 5581 KARVFDRLKPYASK 5622 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 25.8 bits (50), Expect(7) = 3e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os08g10060:12008.t00891:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 55.1 bits (114), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNQIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 37.3 bits (75), Expect(7) = 3e-38 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E L D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRLDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 24.9 bits (48), Expect(7) = 3e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 4954 YVMHEAELYKKSPSGILQRCVSLEEGRQL 5040 Score = 32.7 bits (65), Expect(2) = 0.12 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5471 KTPPVNCVPLSVII*LGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.12 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os11g29570:12011.t02561:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5806 Score = 52.8 bits (109), Expect(7) = 3e-38 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 5108 IVHRFGVPNRIITDNGTQFTGGAFKDFCEDFGIKICYASVAHPMSNGQVESAN 5266 Score = 40.0 bits (81), Expect(7) = 3e-38 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA + V +C+ CQ Sbjct: 4775 GNHAAARTIVSKAYRQGFFWPTAVSDADEIVRTCEGCQ 4888 Score = 39.1 bits (79), Expect(7) = 3e-38 Identities = 18/56 (32%), Positives = 34/56 (60%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + +++ ++R+H++ ++ R F VGD VL Sbjct: 5471 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYQQGLRRYHNRNVRSRAFLVGDLVL 5638 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5330 WVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5458 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5003 GYTHLFVAIDKFSKWIEAKP 5062 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ + +G Sbjct: 5669 KLSPLWEGPFIIAEVTRPGSYRLKHEDG 5752 Score = 26.7 bits (52), Expect(7) = 3e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4655 RLYIIHEAELYKKSPSGILQRCVSLEEGRQLLK 4753
>LOC_Os06g33270:12006.t03024:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2887 Score = 54.7 bits (113), Expect(7) = 3e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 2189 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2347 Score = 41.4 bits (84), Expect(7) = 3e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1856 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1969 Score = 37.7 bits (76), Expect(7) = 3e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2411 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 2539 Score = 36.8 bits (74), Expect(7) = 3e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2084 GYTHLFVAIDKFSKWIEAKP 2143 Score = 35.9 bits (72), Expect(7) = 3e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2552 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 2719 Score = 34.1 bits (68), Expect(7) = 3e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2750 KLSPLWEGPFIISEVTRPGSYRLKREDG 2833 Score = 26.7 bits (52), Expect(7) = 3e-38 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ GV++R E+G+ L K Sbjct: 1742 YVMHEAELYKKSPSGVLQRCVSLEEGRQLLK 1834 Score = 32.2 bits (64), Expect(2) = 0.17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2259 KTPPVNCVPLSVMIRLGTPNLCTM 2188 Score = 24.0 bits (46), Expect(2) = 0.17 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2082 PTAFLNGPTMSSPQTANG 2029
>LOC_Os02g28330:12002.t02527:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6394 Score = 55.6 bits (115), Expect(6) = 4e-38 Identities = 25/53 (47%), Positives = 33/53 (62%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HPQS+GQVE +N Sbjct: 5696 IFCRFGLPHRIITDNGSQFISADFQDYCIRLGVKICFASVSHPQSNGQVERAN 5854 Score = 46.0 bits (94), Expect(6) = 4e-38 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = +1 / +2 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 6098 DVNLLEEHRERVAVRAASYQQSLRRYHEKRIRARTLSIGDYVL 6226 Score = 39.6 bits (80), Expect(6) = 4e-38 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI + +G Sbjct: 6257 KLSPKWEGPYTITQVVRPGAFKIADGDG 6340 Score = 37.7 bits (76), Expect(6) = 4e-38 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +2 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 5912 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGLEAMLPTELRHQS 6046 Score = 36.3 bits (73), Expect(6) = 4e-38 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDEC 555 G + AG K GF+WPT DA V C+ C Sbjct: 5364 GSHAAGRTLVGKAFLQGFFWPTALIDACDMVQRCEAC 5474 Score = 35.0 bits (70), Expect(6) = 4e-38 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPT 732 GY + VA+D TKW+EA PT Sbjct: 5592 GYRFLFVAIDKFTKWIEATPT 5654 Score = 29.9 bits (59), Expect(2) = 0.53 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -3 / -2 Query: 923 T*PLD*G**GDATLWLTSYLASILRKTP*MKCEPSSVIKYLGTPNLGNMTYLSIL 759 T PL *G* +A LT L K+ M EP SV+ G PNL N+ ++++ Sbjct: 5841 TCPLL*G*ETEAKQILTPSLMQ*SWKSALMNWEPLSVMIRWGNPNLQNIPLMNLM 5677 Score = 24.4 bits (47), Expect(2) = 0.53 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -3 / -1 Query: 737 FLVGIASTHLVT*STAT 687 F VG+AS HLV S AT Sbjct: 5659 FPVGVASIHLVNLSIAT 5609
>LOC_Os10g10810:12010.t00886:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os10g19130:12010.t01459:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 27.2 bits (53), Expect(7) = 4e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4960 RLYVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.29 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 23.5 bits (45), Expect(2) = 0.29 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 / -2 Query: 656 NGPI*SKPETSNG 618 NGP S P+T+NG Sbjct: 5291 NGPTMSSPQTANG 5253
>LOC_Os10g17250:12010.t01284:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5471 KTPPVNCVPLSVIIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os09g21610:12009.t01895:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREESYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os04g13030:12004.t01124:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os09g01560:12009.t00058:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6098 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5400 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5558 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5622 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5750 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5295 GYTHLFVAIDKFSKWIEAKP 5354 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5763 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5930 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5961 KLSPLWEGPFIISEVTRPGSYRLKREDG 6044 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 33.6 bits (67), Expect = 6.4 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5470 KTPPVNCVPLSVIIRLGTPNLCTM 5399
>LOC_Os06g33890:12006.t03086:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.066 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 25.4 bits (49), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P+ NGP S P+T+NG Sbjct: 5291 PIAFLNGPTMSSPQTANG 5238
>LOC_Os04g24590:12004.t02171:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os04g16370:12004.t01396:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5468 KTPPVNCVPLSVIIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os01g35740:12001.t03126:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 38.2 bits (77), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 25.8 bits (50), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os07g45020:12007.t04141:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6093 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5395 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5553 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5062 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5175 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5617 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5745 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5290 GYTHLFVAIDKFSKWIEAKP 5349 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5758 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5925 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5956 KLSPLWEGPFIISEVTRPGSYRLKREDG 6039 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4948 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5040 Score = 33.1 bits (66), Expect(2) = 0.089 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5465 KTPPVNCVPLSVMMRLGTPNLCTM 5394 Score = 24.0 bits (46), Expect(2) = 0.089 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5288 PTAFLNGPTISSPQTANG 5235
>LOC_Os06g48470:12006.t04533:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5755 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4945 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5037 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5462 KTPPVNCVPLSVIIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os07g45680:12007.t04205:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6088 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5390 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5548 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5057 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5170 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5612 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5740 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5285 GYTHLFVAIDKFSKWIEAKP 5344 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5753 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5920 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5951 KLSPLWEGPFIISEVTRPGSYRLKREDG 6034 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4943 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5035 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5460 KTPPVNCVPLSVMIRLGTPNLCTM 5389 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5283 PTAFLNGPTMSSPQTANG 5230
>LOC_Os06g37720:12006.t03467:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6087 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5389 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5547 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5056 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5169 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5611 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5739 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5284 GYTHLFVAIDKFSKWIEAKP 5343 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5752 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5919 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5950 KLSPLWEGPFIISEVTRPGSYRLKREDG 6033 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4942 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5034 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5459 KTPPVNCVPLSVMIRLGTPNLCTM 5388 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5282 PTAFLNGPTMSSPQTANG 5229
>LOC_Os08g24270:12008.t02197:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6048 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5350 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5508 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5017 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5130 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5572 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5700 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5245 GYTHLFVAIDKFSKWIEAKP 5304 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5713 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5880 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5911 KLSPLWEGPFIISEVTRPGSYRLKREDG 5994 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4903 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 4995 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5420 KTPPVNCVPLSVIIRLGTPNLCTM 5349 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5243 PTAFLNGPTMSSPQTANG 5190
>LOC_Os09g12330:12009.t01023:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4127 Score = 46.0 bits (94), Expect(6) = 4e-38 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITK 579 G + AG K Q GF+WPT KDA V C+ CQ TK Sbjct: 3096 GSHAAGRTLVGKAFQQGFFWPTALKDACDMVQRCEACQFHSKHTK 3230 Score = 46.0 bits (94), Expect(6) = 4e-38 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+ +P ++TD+GS FI + V AS HPQS+GQVE +N Sbjct: 3429 IFCRYELPHRIITDNGSQFISADIQDYCIGLGVKICFASVSHPQSNGQVERAN 3587 Score = 41.8 bits (85), Expect(6) = 4e-38 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L KWEGPY I +V R GA KI ++EG Sbjct: 3990 KLSPKWEGPYTITQVLRLGAFKIADSEG 4073 Score = 39.6 bits (80), Expect(6) = 4e-38 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+E +PT +IK +K Sbjct: 3324 GYRFLFVAIDKFTKWIEVVPTGEIKADNAIKFIK 3425 Score = 38.6 bits (78), Expect(6) = 4e-38 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 3645 KKWVEELPSVLWAVRTTSTTSNKETPFFLVYGSEAMLPSELRHQS 3779 Score = 38.2 bits (77), Expect(6) = 4e-38 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++R+ +KRI+ ++GDYVL Sbjct: 3831 DVNLLEEHRERVAIRAASYQQALRRYQEKRIRAHILSIGDYVL 3959 Score = 35.4 bits (71), Expect = 1.8 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -3 / -2 Query: 1421 PSVLLILMAPERYTSSIT*GPSHLERSL 1338 PS+ IL AP R T I *GPSHL SL Sbjct: 4072 PSLSAILNAPSRKTCVIV*GPSHLGESL 3989
>LOC_Os09g01820:12009.t00083:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3437 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 2739 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2897 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2406 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2519 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2961 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 3089 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2634 GYTHLFVAIDKFSKWIEAKP 2693 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 3102 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 3269 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 3300 KLSPLWEGPFIISEVTRPGSYRLKREDG 3383 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 2292 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 2384 Score = 32.2 bits (64), Expect(2) = 0.17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2809 KTPPVNCVPLSVMIRLGTPNLCTM 2738 Score = 24.0 bits (46), Expect(2) = 0.17 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2632 PTAFLNGPTMSSPQTANG 2579
>LOC_Os04g24070:12004.t02122:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2461 Score = 54.7 bits (113), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 1763 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 1921 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1430 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1543 Score = 37.7 bits (76), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 1985 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 2113 Score = 36.8 bits (74), Expect(7) = 4e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 1658 GYTHLFVAIDKFSKWIEAKP 1717 Score = 35.9 bits (72), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2126 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 2293 Score = 34.1 bits (68), Expect(7) = 4e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2324 KLSPLWEGPFIISEVTRPGSYRLKREDG 2407 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 1316 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 1408 Score = 32.2 bits (64), Expect(2) = 0.17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 1833 KTPPVNCVPLSVMIRLGTPNLCTM 1762 Score = 24.0 bits (46), Expect(2) = 0.17 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 1656 PTAFLNGPTMSSPQTANG 1603
>LOC_Os01g29380:12001.t02627:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1752 Score = 57.4 bits (119), Expect(7) = 4e-38 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP +++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 1054 IVHRFGVPNHIITDNGTQFTGGVFKDFCEDFGIRIYYASVAHPMSNGQVECAN 1212 Score = 41.4 bits (84), Expect(7) = 4e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 721 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 834 Score = 37.3 bits (75), Expect(7) = 4e-38 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VAVD +KW+EA P Sbjct: 949 GYTHLFVAVDKFSKWIEAKP 1008 Score = 37.3 bits (75), Expect(7) = 4e-38 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W+ +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 1276 WAEQLPSVLWSLRTTPSWATGQSPFFLVYGAEAMLPSEVEFES 1404 Score = 35.0 bits (70), Expect(7) = 4e-38 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L + WEGP+VI EV R G+ ++ +G Sbjct: 1615 KLSALWEGPFVIAEVTRPGSYRLKREDG 1698 Score = 32.2 bits (64), Expect(7) = 4e-38 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + DI+ L+E R A + + ++R+H++ ++ R VGD VL Sbjct: 1417 NFREERYEEDRVDDINRLEEARETALIQSARNLQGLRRYHNRNVRSRALLVGDLVL 1584 Score = 26.3 bits (51), Expect(7) = 4e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 601 RLYVIHETELYKKSPSGILQRCVSLEEGRQLLK 699
>LOC_Os06g11110:12006.t00988:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5928 Score = 53.8 bits (111), Expect(6) = 5e-38 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREI 945 I RFGVP ++TD+G+ F +F + ASP HP+S+GQVE +N EI Sbjct: 5230 ITSRFGVPNRIITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVERANAEI 5397 Score = 46.4 bits (95), Expect(6) = 5e-38 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +1 / +1 Query: 664 SNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 S GY H+ VA+D TKW EA P D H+++K ++ Sbjct: 5119 SRGYQHLYVAIDKFTKWPEAYPVVKIDKHSALKFIR 5226 Score = 44.1 bits (90), Expect(6) = 5e-38 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GFYWPT+ +DA+++V C CQ Sbjct: 4898 GAHSASRTLVGKAFRQGFYWPTVLQDAQEWVRRCKACQ 5011 Score = 37.7 bits (76), Expect(6) = 5e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R +A A +++ ++R+H + ++ R VGD VL Sbjct: 5632 DLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLQVGDLVL 5760 Score = 35.4 bits (71), Expect(6) = 5e-38 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 943 IKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +K I+ + +W +L LWA T G +P+ +VYG P E+ Sbjct: 5407 LKAKTYNILKKHGDSWLEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSEI 5568 Score = 32.2 bits (64), Expect(6) = 5e-38 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +1 / +1 Query: 1300 VLLYNSRLRFFAGRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 ++L + R +L WEGPY + V R G++++ +G Sbjct: 5752 LVLRRVQSRLGLSKLSPMWEGPYKVIGVLRPGSVRLTTEDG 5874 Score = 27.2 bits (53), Expect(2) = 4.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 / -1 Query: 557 WHSSQDKTNLRASLKRVGQ*KP 492 WH+ +T+ AS VGQ*KP Sbjct: 5010 WHALHRRTHSWASCNTVGQ*KP 4945 Score = 24.0 bits (46), Expect(2) = 4.2 Identities = 14/27 (51%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLE 663 S G AS HLV S AT YPLE Sbjct: 5198 SILTTG*ASGHLVNLSMATYRC*YPLE 5118
>LOC_Os09g09870:12009.t00779:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6325 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5627 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5785 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5294 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5407 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5849 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5977 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5522 GYTHLFVAIDKFSKWIEAKP 5581 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D++ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5990 NFREERYEEDRVDDLNRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 6157 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 6188 KLSPLWEGPFIISEVTRPGSYRLKREDG 6271 Score = 24.9 bits (48), Expect(7) = 5e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 5180 YVMHEAELYKKSPSGILQRCVSLEEGRQL 5266 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5697 KTPPVNCVPLSVMIRLGTPNLCTM 5626 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5520 PTAFLNGPTMSSPQTANG 5467
>LOC_Os03g57370:12003.t05004:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6122 Score = 52.8 bits (109), Expect(7) = 5e-38 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 5424 IVHRFGVPNRIITDNGTQFTGGAFQDFCEDFSIKICYASVAHPMSNGQVERAN 5582 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5091 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5204 Score = 38.2 bits (77), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5646 WVDQLSSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5774 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5319 GYTHLFVAIDKFSKWIEAKP 5378 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD V+ Sbjct: 5787 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNVRSRAFLVGDLVM 5954 Score = 33.6 bits (67), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5985 KLSPLWEGPFIIAEVTRPGSYRLKREDG 6068 Score = 26.7 bits (52), Expect(7) = 5e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +3 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4971 RLYIIHETELYKKSPSGILQRCVSLEEGRQLLK 5069
>LOC_Os10g31590:12010.t02482:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.4 bits (71), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5815 DLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os11g42320:12011.t03763:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 40.9 bits (83), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAASDADKIVRTCEGCQ 5193 Score = 38.2 bits (77), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W ++L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVTQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 36.3 bits (73), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYDEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTTFLNGPTMSSPQTANG 5253
>LOC_Os05g05000:12005.t00392:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os04g15610:12004.t01328:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os04g10200:12004.t00853:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4954 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5046 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os10g10830:12010.t00888:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVLHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os08g24650:12008.t02235:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCISLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os06g14140:12006.t01289:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5761 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCISLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os05g07540:12005.t00636:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6097 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5399 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5557 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5066 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5179 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5621 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5749 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5294 GYTHLFVAIDKFSKWIEAKP 5353 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5762 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5929 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5960 KLSPLWEGPFIISEVTRPGSYRLKREDG 6043 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK G+++R E+G+ L K Sbjct: 4952 YVMHESELYKRSPSGILQRCVSLEEGRQLLK 5044 Score = 32.7 bits (65), Expect(2) = 0.12 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5469 KTPPVNCVPLSVMIRLGTPNLWTM 5398 Score = 24.0 bits (46), Expect(2) = 0.12 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5292 PTAFLNGPTMSSPQTANG 5239
>LOC_Os01g35480:12001.t03101:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 35.4 bits (71), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5800 DLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5468 KTPPVNCVPLSVIIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os04g16550:12004.t01414:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5755 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 25.8 bits (50), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4945 YAMHEAELYKKSPSGILQRCVSLEEGRQLLK 5037 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5462 KTPPVNCVPLSVMIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os06g31620:12006.t02861:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5796 Score = 53.8 bits (111), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5098 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5256 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4765 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4878 Score = 38.2 bits (77), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W ++L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5320 WVNQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5448 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 4993 GYTHLFVAIDKFSKWIEAKP 5052 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5461 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5628 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5659 KLSPLWEGPFIISEVTRPGSYRLKREDG 5742 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4651 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 4743 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5168 KTPPVNCLPLSVMIRLGTPNLCTM 5097 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 4991 PTAFLNGPTMSSPQTANG 4938
>LOC_Os04g18850:12004.t01627:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3632 Score = 53.8 bits (111), Expect(7) = 5e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 2934 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 3092 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2601 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2714 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 3156 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 3284 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2829 GYTHLFVAIDKFSKWIEAKP 2888 Score = 36.3 bits (73), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 3297 NFHEERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 3464 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 3495 KLSPLWEGPFIISEVTRPGSYRLKREDG 3578 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 2487 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 2579 Score = 31.8 bits (63), Expect(2) = 0.23 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 3004 KTPPVNCLPLSVMIRLGTPNLCTM 2933 Score = 24.0 bits (46), Expect(2) = 0.23 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2827 PTAFLNGPTMSSPQTANG 2774
>LOC_Os05g44000:12005.t03889:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3445 Score = 54.2 bits (112), Expect(7) = 5e-38 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = +1 / +2 Query: 787 RFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 2756 RFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2905 Score = 41.4 bits (84), Expect(7) = 5e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2414 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2527 Score = 37.7 bits (76), Expect(7) = 5e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2969 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 3097 Score = 36.8 bits (74), Expect(7) = 5e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2642 GYTHLFVAIDKFSKWIEAKP 2701 Score = 35.9 bits (72), Expect(7) = 5e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 3110 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 3277 Score = 34.1 bits (68), Expect(7) = 5e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 3308 KLSPLWEGPFIISEVTRPGSYRLKREDG 3391 Score = 26.3 bits (51), Expect(7) = 5e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 2300 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 2392 Score = 32.7 bits (65), Expect(2) = 0.12 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNL 786 KTP + C P SVI LGTPNL Sbjct: 2817 KTPPVNCVPLSVIIRLGTPNL 2755 Score = 24.0 bits (46), Expect(2) = 0.12 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2640 PTAFLNGPTMSSPQTANG 2587
>LOC_Os05g37750:12005.t03317:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1656 Score = 53.8 bits (111), Expect(6) = 5e-38 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREI 945 I RFGVP ++TD+G+ F +F + ASP HP+S+GQVE +N EI Sbjct: 958 ITSRFGVPNCIITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVERANAEI 1125 Score = 53.3 bits (110), Expect(6) = 5e-38 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GFYWPT +DA+++V C Q T + + + PF Sbjct: 625 GAHSASRTLVEKAFRQGFYWPTALQDAQEWVQRCKARQFHAKQTHQPAQALQVIPLSWPF 804 Query: 625 DVSGFDYMGPFPSSNG 672 V G D +GPF ++ G Sbjct: 805 AVWGLDILGPFKAA*G 852 Score = 40.0 bits (81), Expect(6) = 5e-38 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +1 / +1 Query: 673 YTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 Y H+ VA+D TKW A P D H+++K +K Sbjct: 856 YQHLYVAIDKFTKWPVAYPVVKIDKHSALKFIK 954 Score = 36.8 bits (74), Expect(6) = 5e-38 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A A +++ ++R+H + ++ R VGD VL Sbjct: 1360 DLDYLEEQRRGAALRAARYQQSLRRYHQRHVRARSLQVGDLVL 1488 Score = 34.1 bits (68), Expect(6) = 5e-38 Identities = 14/54 (25%), Positives = 23/54 (42%) Frame = +1 / +1 Query: 943 IKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +K ++ + +W +L LW T G +P+ +VYG P EL Sbjct: 1135 LKTKTYNVLKKHGDSWLEELPTVLWENRTTPSRATGETPFFLVYGAEAVLPSEL 1296 Score = 31.8 bits (63), Expect(6) = 5e-38 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 / +1 Query: 1300 VLLYNSRLRFFAGRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 ++L + R +L WEGPY + +V R G++++ +G Sbjct: 1480 LVLRRVQSRLGLSKLSPMWEGPYKVIKVPRPGSVRLTMEDG 1602
>LOC_Os12g17290:12012.t01581:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 12624 Score = 54.7 bits (113), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 11926 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 12084 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 11593 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 11706 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 12148 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 12276 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 11821 GYTHLFVAIDKFSKWIEAKP 11880 Score = 36.3 bits (73), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 27/43 (62%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 12328 DLNRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 12456 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 12487 KLSPLWEGPFIISEVTRPGSYRLKREDG 12570 Score = 24.9 bits (48), Expect(7) = 7e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 11479 YVMHEAELYKKSPSGILQRCVSLEEGRQL 11565 Score = 32.2 bits (64), Expect(2) = 0.15 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 11996 KTPPVNCVPLSVMIRLGTPNLCTM 11925 Score = 24.0 bits (46), Expect(2) = 0.15 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 11819 PTAFLNGPTMSSPQTANG 11766
>LOC_Os08g37530:12008.t03490:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 7e-38 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F G+F+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGKQFTGGIFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWMEAKP 5367 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 27.2 bits (53), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y ++ LYK+ G+++R E+G+ L K Sbjct: 4966 YVMNEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 29.0 bits (57), Expect(2) = 1.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 K P + C P SV+ LGTPNL M Sbjct: 5483 KIPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 1.3 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os08g13620:12008.t01239:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os04g10850:12004.t00915:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6110 Score = 53.8 bits (111), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5412 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5570 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5079 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5192 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5634 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5762 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5307 GYTHLFVAIDKFSKWIEAKP 5366 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5775 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5942 Score = 33.1 bits (66), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5973 KLSPLWEGPFLISEVTRPGSYRLKREDG 6056 Score = 27.2 bits (53), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y ++ LYK+ G+++R E+G+ L K Sbjct: 4965 YVMNEAELYKKSPSGILQRCVSLEEGRQLLK 5057 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5482 KTPPVNCLPLSVMIRLGTPNLCTM 5411 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5305 PTAFLNGPTMSSPQTANG 5252
>LOC_Os12g29190:12012.t02629:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6096 Score = 54.7 bits (113), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 39.6 bits (80), Expect(7) = 7e-38 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 33.1 bits (66), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H+ ++ R F VGD VL Sbjct: 5800 DLHRLEEVREAALIRSARYLQGLRRYHNCNVRSRAFLVGDLVL 5928 Score = 26.3 bits (51), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5468 KTPPVNCVPLSVMIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTANG 5238
>LOC_Os07g45650:12007.t04202:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 35.4 bits (71), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5794 DLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 25.8 bits (50), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4945 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 5037 Score = 29.5 bits (58), Expect(2) = 0.96 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPN 789 KTP + C P SV+ LGTPN Sbjct: 5462 KTPPVNCVPLSVMIRLGTPN 5403 Score = 24.0 bits (46), Expect(2) = 0.96 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os05g30270:12005.t02626:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5534 Score = 53.8 bits (111), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 4836 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 4994 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4503 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4616 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5058 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5186 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 4731 GYTHLFVAIDKFSKWIEAKP 4790 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5199 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5366 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5397 KLSPLWEGPFIISEVTRPGSYRLKREDG 5480 Score = 26.3 bits (51), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4389 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 4481 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 4906 KTPPVNCLPLSVMIRLGTPNLCTM 4835 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 4729 PTAFLNGPTMSSPQTANG 4676
>LOC_Os06g35440:12006.t03241:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3821 Score = 54.7 bits (113), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 3123 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 3281 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2790 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2903 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 3345 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 3473 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 3018 GYTHLFVAIDKFSKWIEAKP 3077 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 3486 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 3653 Score = 34.5 bits (69), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ + +G Sbjct: 3684 KLSPLWEGPFIISEVTRPGSYRLKHEDG 3767 Score = 24.9 bits (48), Expect(7) = 7e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 2676 YVMHEAELYKKSPSGILQRCVSLEEGRQL 2762 Score = 32.2 bits (64), Expect(2) = 0.17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 3193 KTPPVNCVPLSVMIRLGTPNLCTM 3122 Score = 24.0 bits (46), Expect(2) = 0.17 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 3016 PTAFLNGPTMSSPQTANG 2963
>LOC_Os12g33900:12012.t03079:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2887 Score = 53.8 bits (111), Expect(7) = 7e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 2189 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2347 Score = 41.4 bits (84), Expect(7) = 7e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1856 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1969 Score = 37.7 bits (76), Expect(7) = 7e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2411 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 2539 Score = 36.8 bits (74), Expect(7) = 7e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 2084 GYTHLFVAIDKFSKWIEAKP 2143 Score = 35.9 bits (72), Expect(7) = 7e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2552 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 2719 Score = 34.1 bits (68), Expect(7) = 7e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2750 KLSPLWEGPFIISEVTRPGSYRLKREDG 2833 Score = 26.3 bits (51), Expect(7) = 7e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 1742 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 1834 Score = 31.8 bits (63), Expect(2) = 0.23 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2259 KTPPVNCLPLSVMIRLGTPNLCTM 2188 Score = 24.0 bits (46), Expect(2) = 0.23 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2082 PTAFLNGPTMSSPQTANG 2029
>LOC_Os06g32140:12006.t02912:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 5593 Score = 133 bits (285), Expect(3) = 8e-38 Identities = 49/101 (48%), Positives = 70/101 (69%) Frame = +1 / +2 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YGG++ RT K+ QSGF+WP ++ D ++F+ C CQ+ G IT MP+ Y+L ++ Sbjct: 5186 YGGHYGAFRTHAKIWQSGFFWPRMYDDTKEFIRRCTSCQKHGGITACDAMPLTYNLQVEL 5365 Query: 622 FDVSGFDYMGPFPSSNGYTHVLVAVDYVTKWVEAIPTKNAD 744 FDV G ++MGPFP S ++LVAVDYV+KWVEA+P + AD Sbjct: 5366 FDVWGINFMGPFPKSYDCKYILVAVDYVSKWVEAMPCRAAD 5488 Score = 34.5 bits (69), Expect(3) = 8e-38 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +2 / +2 Query: 299 QQKKKFFFDLRHYFWDDPHLYKEGVDGVIRRVTEHEQG 412 + KK+ + R + W P+LY+ DG++RR ++G Sbjct: 5039 ENKKRLIYKSRGHLWYAPYLYRVCSDGLLRRCVPVDKG 5152 Score = 29.5 bits (58), Expect(3) = 8e-38 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = +2 / +2 Query: 212 VIRASHSAPWYADYANYIVAKYIPP 286 +++ S WYA N++VA ++PP Sbjct: 4961 LLKVIDSDSWYATIVNFMVAGHVPP 5035 Score = 45.1 bits (92), Expect = 0.002 Identities = 23/41 (56%), Positives = 27/41 (65%) Frame = -3 / -2 Query: 743 SAFLVGIASTHLVT*STATKT*VYPLELGNGPI*SKPETSN 621 SA L GIASTHL T*STAT+ + + G GP+ P TSN Sbjct: 5487 SAALHGIASTHLDT*STATRIYLQS*DFGKGPMKLMPHTSN 5365
>LOC_Os11g22300:12011.t01900:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6138 Score = 49.2 bits (101), Expect(7) = 9e-38 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GF+WPT+ DA K V +C+ CQ T + L+ PF Sbjct: 5098 GNHAAARTIVGKAYRQGFFWPTVVSDADKIVRTCEGCQFFARQTHLPAQELQTILLSWPF 5277 Query: 625 DVSGFD 642 V G D Sbjct: 5278 AVWGLD 5295 Score = 48.3 bits (99), Expect(7) = 9e-38 Identities = 21/53 (39%), Positives = 29/53 (54%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP +TD+G+ F GVF+ + + A HP +GQVE +N Sbjct: 5440 IVHRFGVPNRSITDNGTQFTSGVFKDFCEDFGIKICYAFVAHPMRNGQVERAN 5598 Score = 38.2 bits (77), Expect(7) = 9e-38 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + GE + D+ L+E A + + + ++R+H++ I+ R F VGD VL Sbjct: 5803 NFREERYGEDQVDDLHRLEEAHEAALIQSARYLQGLRRYHNRNIRSRAFLVGDLVL 5970 Score = 37.3 bits (75), Expect(7) = 9e-38 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +1 / +1 Query: 967 VNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 +N W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5641 LNPYASKWVEQLPSILWSLCTTPSRATGQSPFFLVYGAETMLPSEVEFES 5790 Score = 35.0 bits (70), Expect(7) = 9e-38 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +1 / +1 Query: 667 NGYTHVLVAVDYVTKWVEAIP 729 + YTH+ VAVD +KW+EA P Sbjct: 5332 SSYTHLFVAVDKFSKWIEAKP 5394 Score = 30.9 bits (61), Expect(7) = 9e-38 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKI 1407 +L WEGP++I EV R G+ ++ Sbjct: 6001 KLSPLWEGPFIISEVTRPGSYRL 6069 Score = 26.7 bits (52), Expect(7) = 9e-38 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4978 RLYIIHEAELYKKSPSGILQRCVSLEEGRQLLK 5076
>LOC_Os08g29930:12008.t02746:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 35.9 bits (72), Expect(7) = 9e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 35.4 bits (71), Expect(7) = 9e-38 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ +A+D +KW+EA P Sbjct: 5308 GYTHLFLAIDKFSKWIEAKP 5367 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 9e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCVPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os12g28190:12012.t02529:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.3 bits (110), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKYFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 9e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 9e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 9e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 30.4 bits (60), Expect(2) = 0.53 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPN 789 KTP + C P SVI LGTPN Sbjct: 5483 KTPPVNCLPLSVIIRLGTPN 5424 Score = 24.0 bits (46), Expect(2) = 0.53 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os09g01530:12009.t00055:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 6096 Score = 54.7 bits (113), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5398 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5556 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5065 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5178 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5620 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5748 Score = 36.8 bits (74), Expect(7) = 9e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5293 GYTHLFVAIDKFSKWIEAKP 5352 Score = 34.5 bits (69), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5800 DFHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5928 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5959 KLSPLWEGPFIISEVTRPGSYRLKREDG 6042 Score = 26.3 bits (51), Expect(7) = 9e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4951 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5043 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5468 KTPPVNCVPLSVIIRLGTPNLCTM 5397 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5291 PTAFLNGPTMSSPQTTNG 5238
>LOC_Os12g17740:12012.t01626:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 9e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 35.9 bits (72), Expect(7) = 9e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5755 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 24.9 bits (48), Expect(7) = 9e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 4945 YVMHEAELYKKSPSGILQRCVSLEEGRQL 5031 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5462 KTPPVNCVPLSVIIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os04g53280:12004.t04800:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 9e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 35.9 bits (72), Expect(7) = 9e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5755 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 24.9 bits (48), Expect(7) = 9e-38 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 4945 YVMHEAELYKKSPSGILQRCVSLEEGRQL 5031 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5462 KTPPVNCVPLSVMIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os02g31180:12002.t02811:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5643 Score = 53.8 bits (111), Expect(7) = 9e-38 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 4945 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFVIKICYASVAHPMSNGQVERAN 5103 Score = 41.4 bits (84), Expect(7) = 9e-38 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4612 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4725 Score = 37.7 bits (76), Expect(7) = 9e-38 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5167 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5295 Score = 36.8 bits (74), Expect(7) = 9e-38 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 4840 GYTHLFVAIDKFSKWIEAKP 4899 Score = 35.9 bits (72), Expect(7) = 9e-38 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5308 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5475 Score = 34.1 bits (68), Expect(7) = 9e-38 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5506 KLSPLWEGPFIISEVTRPGSYRLKREDG 5589 Score = 25.8 bits (50), Expect(7) = 9e-38 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4498 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 4590 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5015 KTPPVNCVPLSVMIRLGTPNLCTM 4944 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 4838 PTAFLNGPTMSSPQTANG 4785
>LOC_Os11g44060:12011.t03935:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3099 Score = 53.8 bits (111), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 2401 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2559 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 2068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 2181 Score = 37.3 bits (75), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2623 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEVMLPSEVEFES 2751 Score = 35.9 bits (72), Expect(7) = 1e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2764 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 2931 Score = 35.0 bits (70), Expect(7) = 1e-37 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ V +D +KW+EA P Sbjct: 2296 GYTHLFVTIDKFSKWIEAKP 2355 Score = 34.1 bits (68), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2962 KLSPLWEGPFIISEVTRPGSYRLKREDG 3045 Score = 28.1 bits (55), Expect(7) = 1e-37 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G++RR E+G+ L K Sbjct: 1954 YVMHEAELYKKSPSGILRRCVSLEEGRQLLK 2046 Score = 31.8 bits (63), Expect(2) = 0.23 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2471 KTPPVNCLPLSVMIRLGTPNLCTM 2400 Score = 24.0 bits (46), Expect(2) = 0.23 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 2294 PTAFLNGPTMSSPQTANG 2241
>LOC_Os02g27640:12002.t02458:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2884 Score = 54.7 bits (113), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 2182 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2340 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1849 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVQTCEGCQ 1962 Score = 37.3 bits (75), Expect(7) = 1e-37 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + GE + D+ L+E R A + + + ++ +H++ ++ R+F VGD VL Sbjct: 2549 NFREERYGEDRVDDLHRLEEAREAALIQSARYLQGLRCYHNRNVRSRDFLVGDLVL 2716 Score = 35.9 bits (72), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 2408 WVEQLPSVLWSLRTTPSRATG*SPFFLVYGAEATLPSEMEFES 2536 Score = 35.0 bits (70), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GY H+ VAVD +KW+EA P Sbjct: 2077 GYNHLFVAVDKFSKWIEAKP 2136 Score = 32.7 bits (65), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2747 KLSPLWEGPFIIFEVTRPGSYRLKREDG 2830 Score = 28.6 bits (56), Expect(7) = 1e-37 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y D LYK+ G+++R E+G+ L K Sbjct: 1729 RLYIIHDAELYKKSPSGILQRCVSLEEGRQLLK 1827
>LOC_Os09g27810:12009.t02459:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4550 Score = 59.7 bits (124), Expect(5) = 1e-37 Identities = 27/76 (35%), Positives = 33/76 (43%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K GF+WPT KDA V C+ CQ TK + + PF Sbjct: 3684 GSHAAGRTLLGKTF*QGFFWPTTLKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWPF 3863 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 3864 SCWGLDILGPFPRGQG 3911 Score = 51.5 bits (106), Expect(5) = 1e-37 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI F+ + V AS HP S+GQVE +N Sbjct: 4017 IFCRFGLPHRIITDNGSQFISADFQDYYIRLGVKICFASVSHP*SNGQVERAN 4175 Score = 42.3 bits (86), Expect(5) = 1e-37 Identities = 15/43 (34%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ +E R + A +++ ++R+H+KRI+ R ++GDYVL Sbjct: 4419 DVNLPEEHRERVAVRAASYQQALRRYHEKRIRARTLSIGDYVL 4547 Score = 39.6 bits (80), Expect(5) = 1e-37 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 3912 GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 4013 Score = 38.6 bits (78), Expect(5) = 1e-37 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 4233 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQS 4367
>LOC_Os06g38260:12006.t03521:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2287 Score = 129 bits (276), Expect(2) = 1e-37 Identities = 54/149 (36%), Positives = 87/149 (58%) Frame = +1 / +2 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PSS G+ +L+A DY TKWVEAIP K D +I+ ++ I RFG+P+ + TD GS F+ Sbjct: 1586 PSSKGHKFILMATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRFGLPQTITTDQGSIFV 1765 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 F + + SPY+ Q++GQ E SN+ + ++++ ++ + W ++L +ALW Sbjct: 1766 SDEFVQFADSVGIKLLNFSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALW 1945 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +Y A + + PYK+VYG P E+ Sbjct: 1946 SYRMACHGLIQVPPYKLVYGHEAILPWEV 2032 Score = 49.6 bits (102), Expect(2) = 1e-37 Identities = 18/69 (26%), Positives = 35/69 (50%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + + + + ++G++WPT+ +D ++ C +CQ+ G I + MN + PF Sbjct: 1367 GTHQSAHKMKWLIRRAGYFWPTMLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPF 1546 Query: 625 DVSGFDYMG 651 G D +G Sbjct: 1547 RGWGIDMIG 1573 Score = 34.5 bits (69), Expect = 3.4 Identities = 24/80 (30%), Positives = 36/80 (45%) Frame = -2 / -1 Query: 936 ITQLHLTTRLRMIRRCNSMVDIILSEHLAENTMNEV*TVISHQISRDSKSWEYDLFKHLN 757 I +L L L +IR +D L + +E T+I R +KS +Y L LN Sbjct: 1864 IRRLGLPISLCIIR*KIQQLDTHAISKLNKLIGHEYGTLICSNSLRKTKSIDYMLLNKLN 1685 Query: 756 GGVVISIFSGDSLYPLSDVI 697 G I+ G+ YP ++I Sbjct: 1684 GISRINFLQGNCFYPFGEII 1625
>LOC_Os05g24040:12005.t02061:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2861 Score = 60.2 bits (125), Expect(5) = 1e-37 Identities = 27/77 (35%), Positives = 34/77 (44%) Frame = +1 / +3 Query: 442 YGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKP 621 YG + AG K + GF+WPT KDA V C+ CQ TK + + P Sbjct: 1947 YG*HAAGRTLVGKAFRQGFFWPTALKDACDMVQRCEACQFHSKHTKLPAQALQTIPLTWP 2126 Query: 622 FDVSGFDYMGPFPSSNG 672 F G D + PFP G Sbjct: 2127 FSCWGLDILWPFPRGQG 2177 Score = 53.3 bits (110), Expect(5) = 1e-37 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF R+G+P ++TD+GS FI F+ V AS HPQS+GQVE +N Sbjct: 2283 IFCRYGLPHCIITDNGSQFISADFQDYCISLGVKICFASVSHPQSNGQVERAN 2441 Score = 40.9 bits (83), Expect(5) = 1e-37 Identities = 14/43 (32%), Positives = 29/43 (67%) Frame = +1 / +3 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ ++E R + A +++ ++R+H+K IQ R ++GDY+L Sbjct: 2685 DVNLVEEHRERVAVRAASYQQALRRYHEKCIQARILSIGDYIL 2813 Score = 40.0 bits (81), Expect(5) = 1e-37 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA+PT +IK ++ Sbjct: 2178 GYRFLFVAIDKFTKWIEAVPTGEIKADNAIKFIR 2279 Score = 37.3 bits (75), Expect(5) = 1e-37 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +1 / +3 Query: 982 KNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 K W +L LWA T +P+ +VYG P EL H++ Sbjct: 2499 KKWVEELPSVLWAVRTTPTTSNKETPFFLVYGSEAMLPGELRHQS 2633
>LOC_Os12g12340:12012.t01103:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7437 Score = 122 bits (260), Expect(3) = 1e-37 Identities = 53/148 (35%), Positives = 80/148 (54%) Frame = +1 / +1 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G VLVA Y TKW EA+P KN H I + I RFG+P+ L TD G+ F+ Sbjct: 6760 SSKGRRFVLVATGYFTKWAEAVPLKNMTHTEVIDFILKHIIHRFGIPQTLTTDQGACFMS 6939 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 + Y V +SPY+ Q++GQ E SN+ + +++K + K W L ALWA Sbjct: 6940 KEVKSFAKSYGVKLLSSSPYYAQANGQAESSNKTLLKLVKKKIEEHPKKWHEVLSKALWA 7119 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 + + ++P+++VYG+ P+E+ Sbjct: 7120 HRISKHGATKVTPFELVYGQEVVLPVEV 7203 Score = 45.5 bits (93), Expect(3) = 1e-37 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +1 / +1 Query: 487 QSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPFDVSGFDYMG 651 ++GFY P + +D K+ C+ CQR GN+ +N + PF FD++G Sbjct: 6580 RAGFYCPRMIEDCFKYYRGCEACQRFGNVQLAPATVLNPIIKPWPF*GWAFDFIG 6744 Score = 29.5 bits (58), Expect(3) = 1e-37 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +1 / +1 Query: 1201 RTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYV 1302 R +A E + K++V + ++KR++ + F VGD V Sbjct: 7300 RLKALEEIQKEKKRVAKAYNKRVKAKLFQVGDLV 7401
>LOC_Os10g33010:12010.t02609:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6122 Score = 52.8 bits (109), Expect(7) = 1e-37 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 5424 IVHRFGVPNRIITDNGTQFTGGAFKDFCEDFGIKICYASVAHPMSNGQVERAN 5582 Score = 39.6 bits (80), Expect(7) = 1e-37 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +3 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQ 558 K + GF+WPT DA K V +C+ CQ Sbjct: 5124 KAYRQGFFWPTAVSDADKIVRTCEGCQ 5204 Score = 37.7 bits (76), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5646 WVDQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5774 Score = 37.7 bits (76), Expect(7) = 1e-37 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5787 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNVRSRAFLVGDLVL 5954 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5319 GYTHLFVAIDKFSKWIEAKP 5378 Score = 33.6 bits (67), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5985 KLSPLWEGPFIIAEVTRPGSYRLKREDG 6068 Score = 26.7 bits (52), Expect(7) = 1e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +3 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4971 RLYIIHEAELYKKSPSGILQRCVSLEEGRQLLK 5069
>LOC_Os06g14590:12006.t01334:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 54.7 bits (113), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.4 bits (71), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5815 DLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 32.7 bits (65), Expect(7) = 1e-37 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I +V R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISDVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 1e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.7 bits (65), Expect(2) = 0.12 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNL 786 KTP + C P SVI LGTPNL Sbjct: 5483 KTPPVNCVPLSVIIRLGTPNL 5421 Score = 24.0 bits (46), Expect(2) = 0.12 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os07g25090:12007.t02205:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 40.0 bits (81), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYLQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 38.2 bits (77), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVKQLSSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 1e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 1e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os01g09600:12001.t00838:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6097 Score = 53.8 bits (111), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5399 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5557 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5066 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5179 Score = 37.7 bits (76), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5621 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5749 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5294 GYTHLFVAIDKFSKWIEAKP 5353 Score = 35.9 bits (72), Expect(7) = 1e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5762 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5929 Score = 31.3 bits (62), Expect(7) = 1e-37 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I V R G+ ++ +G Sbjct: 5960 KLSPLWEGPFIISAVTRPGSYRLKREDG 6043 Score = 28.1 bits (55), Expect(7) = 1e-37 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 / +2 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ + G+++R E+G+ L K Sbjct: 4952 YIMHEAELYKKSLSGILQRCVSLEEGRQLLK 5044 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5469 KTPPVNCLPLSVMIRLGTPNLCTM 5398 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5292 PTAFLNGPTMSSPQTANG 5239
>LOC_Os08g27280:12008.t02492:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6093 Score = 54.7 bits (113), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5395 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5553 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5062 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5175 Score = 39.6 bits (80), Expect(7) = 1e-37 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W S+L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5617 WVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5745 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5290 GYTHLFVAIDKFSKWIEAKP 5349 Score = 34.1 bits (68), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5956 KLSPLWEGPFIISEVTRPGSYRLKREDG 6039 Score = 32.2 bits (64), Expect(7) = 1e-37 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R VGD VL Sbjct: 5758 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRACLVGDLVL 5925 Score = 26.3 bits (51), Expect(7) = 1e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4948 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5040 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5465 KTPPVNCVPLSVIIRLGTPNLCTM 5394 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5288 PTAFLNGPTMSSPQTANG 5235
>LOC_Os11g28730:12011.t02485:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5684 Score = 54.7 bits (113), Expect(7) = 1e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 4986 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5144 Score = 41.4 bits (84), Expect(7) = 1e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4653 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4766 Score = 37.7 bits (76), Expect(7) = 1e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5208 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5336 Score = 36.8 bits (74), Expect(7) = 1e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 4881 GYTHLFVAIDKFSKWIEAKP 4940 Score = 35.9 bits (72), Expect(7) = 1e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5349 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5516 Score = 34.1 bits (68), Expect(7) = 1e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5547 KLSPLWEGPFIISEVTRPGSYRLKRKDG 5630 Score = 24.4 bits (47), Expect(7) = 1e-37 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 4539 YVLHEAELYKKSPSGILQRCVSLEEGRQL 4625 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5056 KTPPVNCVPLSVMIRLGTPNLCTM 4985 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 4879 PTAFLNGPTMSSPQTANG 4826
>LOC_Os06g25500:12006.t02357:unspliced-genomic expressed protein| Length = 16279 Score = 53.3 bits (110), Expect(7) = 2e-37 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / -2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 7899 IVHRFGVPNQIITDNGTQFTGGTFKDFCEDFGIKICYASVAHPMSNGQVERAN 7741 Score = 38.2 bits (77), Expect(7) = 2e-37 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / -2 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQ 558 K + GF+WPT DA K V +C+ CQ Sbjct: 8199 KAYRQGFFWPTDVSDADKIVRTCEGCQ 8119 Score = 38.2 bits (77), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / -2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 7677 WVDQLSSVLWSLRTTPSRATGQSPFFLVYGAKAMLPSEVEFES 7549 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / -2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 7536 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNVRSRAFLVGDLVL 7369 Score = 36.8 bits (74), Expect(7) = 2e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / -2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 8004 GYTHLFVAIDKFSKWIEAKP 7945 Score = 33.6 bits (67), Expect(7) = 2e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / -2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 7338 KLSPLWEGPFIIAEVTRPGSYRLKREDG 7255 Score = 26.7 bits (52), Expect(7) = 2e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / -2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 8352 RLYIIHETELYKKSPSGILQRCVSLEEGKQLLK 8254
>LOC_Os07g30580:12007.t02745:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 2e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 35.9 bits (72), Expect(7) = 2e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 35.4 bits (71), Expect(7) = 2e-37 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D ++W+EA P Sbjct: 5308 GYTHLFVAIDKFSRWIEAKP 5367 Score = 34.1 bits (68), Expect(7) = 2e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 2e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os04g06610:12004.t00540:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5388 Score = 54.7 bits (113), Expect(7) = 2e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 4690 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 4848 Score = 40.5 bits (82), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4357 GNHAAA*TIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4470 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 4912 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5040 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5053 NFREERYEEDRVDDINRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5220 Score = 37.3 bits (75), Expect(7) = 2e-37 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VAVD +KW+EA P Sbjct: 4585 GYTHLFVAVDKFSKWIEAKP 4644 Score = 32.2 bits (64), Expect(7) = 2e-37 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I +V R G+ ++ + +G Sbjct: 5251 KLSPLWEGPFIIAKVTRPGSYRLKHEDG 5334 Score = 24.4 bits (47), Expect(7) = 2e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +1 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4237 RLYVIHETELYKKSPLGILQRCVSLEEGRQLLK 4335
>LOC_Os10g40150:12010.t03259:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 2e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 2e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.4 bits (71), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5815 DLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 32.7 bits (65), Expect(7) = 2e-37 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I +V R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISDVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 2e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os11g43370:12011.t03867:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6102 Score = 54.7 bits (113), Expect(7) = 2e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5404 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5562 Score = 41.4 bits (84), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5071 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5184 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5626 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5754 Score = 35.4 bits (71), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5806 DLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5934 Score = 35.0 bits (70), Expect(7) = 2e-37 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA D +KW+EA P Sbjct: 5299 GYTHLFVAFDKFSKWIEAKP 5358 Score = 34.1 bits (68), Expect(7) = 2e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5965 KLSPLWEGPFIISEVTRPGSYRLKREDG 6048 Score = 25.8 bits (50), Expect(7) = 2e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4957 YVLHESELYKKSPSGILQRCVSLEEGRQLLK 5049 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5474 KTPPVNCVPLSVIIRLGTPNLCTM 5403 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5297 PTAFLNGPTMSSPQTANG 5244
>LOC_Os06g47380:12006.t04424:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 54.7 bits (113), Expect(7) = 2e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 2e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 2e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 34.1 bits (68), Expect(7) = 2e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIISEVTRPGSYRLKREDG 6036 Score = 33.1 bits (66), Expect(7) = 2e-37 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R VGD VL Sbjct: 5755 NFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRALLVGDLVL 5922 Score = 26.3 bits (51), Expect(7) = 2e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4945 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5037 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5462 KTPPVNCVPLSVIIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os12g18040:12012.t01655:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2373 Score = 56.1 bits (116), Expect(7) = 2e-37 Identities = 24/53 (45%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ A + + AS HP S+GQVE +N Sbjct: 1675 IVHRFGVPNRIITDNGRQFTGGVFKDFCADFGIKICYASVAHPMSNGQVERAN 1833 Score = 41.4 bits (84), Expect(7) = 2e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1342 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1455 Score = 36.8 bits (74), Expect(7) = 2e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 1570 GYTHLFVAIDKFSKWIEAKP 1629 Score = 36.3 bits (73), Expect(7) = 2e-37 Identities = 18/68 (26%), Positives = 36/68 (52%) Frame = +1 / +1 Query: 1102 LEHKAYWAIKELNFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKRE 1281 L + +++ NF + E + D+ L+E R A + + + ++R+H++ ++ R Sbjct: 2002 LSEVEFESLRFRNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 2181 Query: 1282 FNVGDYVL 1305 F VGD VL Sbjct: 2182 FLVGDLVL 2205 Score = 34.1 bits (68), Expect(7) = 2e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2236 KLSPLWEGPFIISEVTRPGSYRLKREDG 2319 Score = 33.1 bits (66), Expect(7) = 2e-37 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG E+E ++ Sbjct: 1897 WVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLLSEVEFES 2025 Score = 26.3 bits (51), Expect(7) = 2e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 1228 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 1320 Score = 31.8 bits (63), Expect(2) = 0.23 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 1745 KTPPVNCLPLSVMIRLGTPNLCTM 1674 Score = 24.0 bits (46), Expect(2) = 0.23 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 1568 PTAFLNGPTMSSPQTANG 1515
>LOC_Os02g01570:12002.t00057:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 51.5 bits (106), Expect(7) = 3e-37 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGTQVTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 3e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 3e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 3e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 3e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 3e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 3e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNL 786 KTP + C P SVI LGTPNL Sbjct: 5483 KTPPVTCVPLSVIIRLGTPNL 5421 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os06g45520:12006.t04240:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6099 Score = 54.7 bits (113), Expect(7) = 3e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 5401 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5559 Score = 41.4 bits (84), Expect(7) = 3e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5068 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5181 Score = 37.7 bits (76), Expect(7) = 3e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5623 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5751 Score = 36.8 bits (74), Expect(7) = 3e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5296 GYTHLFVAIDKFSKWIEAKP 5355 Score = 34.1 bits (68), Expect(7) = 3e-37 Identities = 16/56 (28%), Positives = 30/56 (53%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ +E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5764 NFREERYEEDRVDDLHRFEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5931 Score = 34.1 bits (68), Expect(7) = 3e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5962 KLSPLWEGPFIISEVTRPGSYRLKREDG 6045 Score = 24.9 bits (48), Expect(7) = 3e-37 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQIL 421 Y + LYK+ G+++R E+G+ L Sbjct: 4954 YVMHESELYKKSPSGILQRCVSLEEGRQL 5040 Score = 32.2 bits (64), Expect(2) = 0.16 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5471 KTPPVNCVPLSVMIRLGTPNLCTM 5400 Score = 24.0 bits (46), Expect(2) = 0.16 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5294 PTAFLNGPTMSSPQTANG 5241
>LOC_Os07g26290:12007.t02325:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5101 Score = 53.8 bits (111), Expect(7) = 3e-37 Identities = 28/79 (35%), Positives = 42/79 (53%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLIL 957 I RFGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N I + Sbjct: 4403 IVHRFGVPTGIITDNGTQFTGGAFKNFCEDFGIKICYASMAHPMSNGQVERANGMILQGI 4582 Query: 958 QKIVNRSRKNWSSKLDDAL 1014 + V + ++SK D L Sbjct: 4583 KARVFDRLRPYASKWVDQL 4639 Score = 41.4 bits (84), Expect(7) = 3e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 4070 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 4183 Score = 37.7 bits (76), Expect(7) = 3e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 4625 WVDQLSSLLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 4753 Score = 37.7 bits (76), Expect(7) = 3e-37 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF+ + E + DI+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 4766 NFNEEGYEEGRVDDINRLEEAREAALIQSTRYLQGLRRYHNRNVRSRAFLVGDLVL 4933 Score = 35.4 bits (71), Expect(7) = 3e-37 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW++A P Sbjct: 4298 GYTHLFVAIDKFSKWIDAKP 4357 Score = 32.2 bits (64), Expect(7) = 3e-37 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTE 1419 +L WEGP++I+EV R G+ ++ + Sbjct: 4964 KLSPLWEGPFIIDEVTRPGSYRLKRED 5044 Score = 25.4 bits (49), Expect(7) = 3e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 3950 RLYIIHEAELYKKSPSGILQRCVFLEEGRQLLK 4048
>LOC_Os01g35390:12001.t03092:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3733 Score = 55.1 bits (114), Expect(7) = 3e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 3035 IVHRFGVPNQIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 3193 Score = 42.3 bits (86), Expect(7) = 3e-37 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT+ DA K V +C+ CQ Sbjct: 2702 GNHAAARTIVGKAYRQGFFWPTVVSDADKIVRTCEGCQ 2815 Score = 37.7 bits (76), Expect(7) = 3e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 3257 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 3385 Score = 35.9 bits (72), Expect(7) = 3e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 3398 NFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 3565 Score = 35.9 bits (72), Expect(7) = 3e-37 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV RSG+ ++ +G Sbjct: 3596 KLSPLWEGPFIISEVTRSGSYQLKREDG 3679 Score = 30.4 bits (60), Expect(7) = 3e-37 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +K +EA P Sbjct: 2930 GYTHLFVAIDKFSKSIEAKP 2989 Score = 26.3 bits (51), Expect(7) = 3e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 2582 RLYVIHEAELYKKSPSGILQRCVSLEEGRQLLK 2680 Score = 32.7 bits (65), Expect(2) = 8.8 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 3105 KTPPVNCVPLSVII*LGTPNLCTM 3034 Score = 24.0 bits (46), Expect(2) = 8.8 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 / -2 Query: 1394 PERYTSSIT*GPSH 1353 P+R TS I GPSH Sbjct: 3651 PDRVTSEIMNGPSH 3610
>LOC_Os07g19510:12007.t01805:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6361 Score = 129 bits (276), Expect(2) = 4e-37 Identities = 54/152 (35%), Positives = 87/152 (57%) Frame = +1 / +1 Query: 661 SSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFIH 840 SS G+ VLVA DY +KW EA+P KN H I + I RFG+P+ L TD G+ F+ Sbjct: 4315 SSKGHRFVLVATDYFSKWTEAVPLKNMTHKEVINFVLEHIIHRFGIPQTLTTDQGASFMS 4494 Query: 841 GVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALWA 1020 F + + + +SPY+ Q++GQ E SN+ + +++K V + W L +ALWA Sbjct: 4495 HQFSEFAESFRIKLLNSSPYYAQANGQAESSNKILIKLIKKKVEEHPRRWHEVLSEALWA 4674 Query: 1021 YGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 + + + ++PY++VYG+ P+E+ +A Sbjct: 4675 HRISKHGAIQVTPYELVYGQEAVLPVEVNLQA 4770 Score = 47.8 bits (98), Expect(2) = 4e-37 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNI 573 G + + + + ++GFYWPT+ +D ++ C+ CQR GNI Sbjct: 4093 GTHQSAHKMQWLLKRAGFYWPTMLEDCFRYYKGCEACQRFGNI 4221
>LOC_Os05g15990:12005.t01370:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 4e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 4e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 4e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 4e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 4e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 31.3 bits (62), Expect(7) = 4e-37 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I V R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISAVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 4e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os12g23920:12012.t02122:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6090 Score = 51.9 bits (107), Expect(7) = 4e-37 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + A HP S+GQVE +N Sbjct: 5392 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYALVAHPMSNGQVERAN 5550 Score = 41.4 bits (84), Expect(7) = 4e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5059 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5172 Score = 37.7 bits (76), Expect(7) = 4e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5614 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5742 Score = 36.8 bits (74), Expect(7) = 4e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5287 GYTHLFVAIDKFSKWIEAKP 5346 Score = 36.3 bits (73), Expect(7) = 4e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5755 NFREERYEEDRVDDLHQLEEAREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 5922 Score = 32.7 bits (65), Expect(7) = 4e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5953 KLSPLWEGPFIIFEVTRPGSYRLKREDG 6036 Score = 26.3 bits (51), Expect(7) = 4e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4945 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 5037 Score = 33.6 bits (67), Expect(2) = 0.066 Identities = 15/24 (62%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SVI LGTPNL M Sbjct: 5462 KTPPVNCVPLSVIIRLGTPNLCTM 5391 Score = 24.0 bits (46), Expect(2) = 0.066 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5285 PTAFLNGPTMSSPQTANG 5232
>LOC_Os01g36160:12001.t03166:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4865 Score = 53.8 bits (111), Expect(7) = 4e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 4167 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 4325 Score = 41.4 bits (84), Expect(7) = 4e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 3834 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 3947 Score = 37.7 bits (76), Expect(7) = 4e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 4389 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 4517 Score = 36.8 bits (74), Expect(7) = 4e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 4062 GYTHLFVAIDKFSKWIEAKP 4121 Score = 35.9 bits (72), Expect(7) = 4e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 4530 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 4697 Score = 31.3 bits (62), Expect(7) = 4e-37 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I V R G+ ++ +G Sbjct: 4728 KLSPLWEGPFIISAVTRPGSYRLKREDG 4811 Score = 26.3 bits (51), Expect(7) = 4e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 3720 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 3812 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 4237 KTPPVNCLPLSVMIRLGTPNLCTM 4166 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 4060 PTAFLNGPTMSSPQTTNG 4007
>LOC_Os12g28330:12012.t02543:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1735 Score = 55.1 bits (114), Expect(7) = 5e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 1037 IVHRFGVPNRIITDNGTQFTDGVFKDFCEDFGIKICYASVAHPMSNGQVERTN 1195 Score = 41.4 bits (84), Expect(7) = 5e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 704 GNHAAARTIVGKTYRQGFFWPTAVSDADKIVRTCEGCQ 817 Score = 41.4 bits (84), Expect(7) = 5e-37 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +1 / +2 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + GE + D++ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 1400 NFSEERYGEDRVDDLNRLEEAREAALIQSARYLQGMRRYHNRNVRSRAFLVGDLVL 1567 Score = 35.0 bits (70), Expect(7) = 5e-37 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ +AVD +KW++A P Sbjct: 932 GYTHLFIAVDKFSKWIKAKP 991 Score = 33.6 bits (67), Expect(7) = 5e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 1598 KLSPSWEGPFIISEVTRPGSYRLKLEDG 1681 Score = 29.9 bits (59), Expect(7) = 5e-37 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T S + +VYG P E+E ++ Sbjct: 1259 WVEQLPSVLWSLRTTPSRATDQSLFFLVYGAEAMLPSEVEFES 1387 Score = 26.7 bits (52), Expect(7) = 5e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 584 RLYIIHETELYKKSPSGILQRCVSLEEGRQLLK 682
>LOC_Os01g08890:12001.t00767:unspliced-genomic expressed protein| Length = 25395 Score = 51.0 bits (105), Expect(7) = 5e-37 Identities = 22/53 (41%), Positives = 31/53 (58%) Frame = +1 / +3 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F VF+ + + AS HP S+GQVE +N Sbjct: 10038 IVHRFGVPNRIITDNGTQFTGEVFKDFCEDFGIKICYASVAHPMSNGQVERAN 10196 Score = 41.4 bits (84), Expect(7) = 5e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +3 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 9705 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 9818 Score = 37.7 bits (76), Expect(7) = 5e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +3 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 10260 WVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 10388 Score = 36.8 bits (74), Expect(7) = 5e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +3 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 9933 GYTHLFVAIDKFSKWIEAKP 9992 Score = 35.9 bits (72), Expect(7) = 5e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +3 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 10401 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL 10568 Score = 34.1 bits (68), Expect(7) = 5e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +3 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 10599 KLSPLWEGPFIISEVTRPGSYRLKREDG 10682 Score = 25.8 bits (50), Expect(7) = 5e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +3 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 9591 YVLHEAELYKKSPSGILQRCVSLEEGRQLLK 9683 Score = 25.8 bits (50), Expect(2) = 8.8 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -3 / -3 Query: 848 KTP*MKCEPSSVIKYLGTPN 789 KT + C P SV+ LGTPN Sbjct: 10108 KTSPVNCVPLSVMIRLGTPN 10049 Score = 24.0 bits (46), Expect(2) = 8.8 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -3 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 9931 PTAFLNGPTMSSPQTANG 9878
>LOC_Os03g26390:12003.t02325:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 6138 Score = 53.3 bits (110), Expect(7) = 6e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 6e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 37.7 bits (76), Expect(7) = 6e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5635 WVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFES 5763 Score = 36.8 bits (74), Expect(7) = 6e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 6e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 31.3 bits (62), Expect(7) = 6e-37 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I V R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISAVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 6e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os05g17960:12005.t01565:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6097 Score = 51.5 bits (106), Expect(7) = 6e-37 Identities = 21/53 (39%), Positives = 31/53 (58%) Frame = +1 / +2 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I +FGVP ++TD+G+ F G F+ + + AS HP S+GQVE +N Sbjct: 5432 IVHQFGVPNRIITDNGTQFTGGAFKDFCEDFGIKICYASVAHPMSNGQVECAN 5590 Score = 39.6 bits (80), Expect(7) = 6e-37 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +2 Query: 478 KVLQSGFYWPTLFKDARKFVLSCDECQ 558 K + GF+WPT DA K V +C+ CQ Sbjct: 5132 KAYRQGFFWPTAVSDADKIVWTCEGCQ 5212 Score = 37.3 bits (75), Expect(7) = 6e-37 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 / +2 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VYG P E+E ++ Sbjct: 5654 WVDQLPSVLWSLRTTPSRATGQSPFFLVYGVEAMLPSEVEFES 5782 Score = 37.3 bits (75), Expect(7) = 6e-37 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = +1 / +2 Query: 1180 ISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVLL 1308 I+ L+E R A+ + + + ++R+H++ ++ R F VGD VL+ Sbjct: 5837 INRLEEAREAAFIQSTRYLQGLRRYHNRNVRSRAFLVGDLVLM 5965 Score = 36.8 bits (74), Expect(7) = 6e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +2 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5327 GYTHLFVAIDKFSKWIEAKP 5386 Score = 33.6 bits (67), Expect(7) = 6e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +2 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5993 KLSPLWEGPFIIAEVTRPGSYRLKREDG 6076 Score = 26.7 bits (52), Expect(7) = 6e-37 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 329 RHYFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 R Y + LYK+ G+++R E+G+ L K Sbjct: 4979 RLYIIHEAELYKKSPSGILQRCVSLEEGRQLLK 5077
>LOC_Os12g20300:12012.t01871:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5937 Score = 53.8 bits (111), Expect(6) = 6e-37 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREI 945 I RFGVP ++TD+G+ F +F + ASP HP+S+GQVE +N EI Sbjct: 5239 ITSRFGVPNRIITDNGTQFTSELFGDYCDDMGIKLCFASPAHPKSNGQVERANAEI 5406 Score = 44.6 bits (91), Expect(6) = 6e-37 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY H+ VA+D TKW EA P D H+++K ++ Sbjct: 5134 GYQHLYVAIDKFTKWPEAYPVVKIDKHSALKFIR 5235 Score = 43.2 bits (88), Expect(6) = 6e-37 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GFYWPT +DA+++V C CQ Sbjct: 4906 GAHSASRTLVGKAFRQGFYWPTALQDAQEWVRRCKACQ 5019 Score = 37.7 bits (76), Expect(6) = 6e-37 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R +A A +++ ++R+H + ++ R VGD VL Sbjct: 5641 DLDYLEERRRRAALRAARYQQSLRRYHQRHVRARSLQVGDLVL 5769 Score = 37.3 bits (75), Expect(6) = 6e-37 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +1 / +1 Query: 943 IKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +K ++ R +W +L LWA T G +P+ +VYG P EL Sbjct: 5416 LKTKTYNVLKRHGDSWLEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSEL 5577 Score = 29.5 bits (58), Expect(6) = 6e-37 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +1 / +1 Query: 1300 VLLYNSRLRFFAGRLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 ++L + R +L WEGPY + V R G++++ +G Sbjct: 5761 LVLRRVQSRLGLSKLSPTWEGPYKVICVPRPGSVRLTMEDG 5883
>LOC_Os05g43010:12005.t03794:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2670 Score = 54.7 bits (113), Expect(7) = 6e-37 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G+ F GVF+ + + AS HP S+GQVE +N Sbjct: 1972 IVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 2130 Score = 41.4 bits (84), Expect(7) = 6e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 1639 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1752 Score = 36.8 bits (74), Expect(7) = 6e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 1867 GYTHLFVAIDKFSKWIEAKP 1926 Score = 35.9 bits (72), Expect(7) = 6e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 2335 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 2502 Score = 34.1 bits (68), Expect(7) = 6e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 2533 KLSPLWEGPFIISEVTRPGSYRLKREDG 2616 Score = 33.6 bits (67), Expect(7) = 6e-37 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G S + +VYG P E+E ++ Sbjct: 2194 WVQQLPSVLWSLRTTPSRATGQSHFFLVYGAEAMLPSEVEFES 2322 Score = 26.3 bits (51), Expect(7) = 6e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 1525 YVMHESELYKKSPSGILQRCVSLEEGRQLLK 1617 Score = 32.2 bits (64), Expect(2) = 0.17 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 2042 KTPPVNCVPLSVMIRLGTPNLCTM 1971 Score = 24.0 bits (46), Expect(2) = 0.17 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 1865 PTAFLNGPTMSSPQTANG 1812
>LOC_Os01g13620:12001.t01223:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5268 Score = 56.1 bits (116), Expect(5) = 7e-37 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +1 / +2 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + A K + GFYWPT +DA+K+V C CQ T + ++ + PF Sbjct: 4391 GAHSASRTLVGKAFRQGFYWPTALQDAQKWVRRCKACQFHAKQTHQPAQALHVIPLSWPF 4570 Query: 625 DVSGFDYMGP 654 V G D +GP Sbjct: 4571 AVWGLDILGP 4600 Score = 52.4 bits (108), Expect(5) = 7e-37 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREI 945 I RFGVP ++TD+G+ F +F + ASP HP+S+GQV+ +N EI Sbjct: 4711 ITSRFGVPNRIITDNGTQFTSELFGDYCDDMSIKLCFASPAHPKSNGQVKRANAEI 4878 Score = 44.1 bits (90), Expect(5) = 7e-37 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY H+ VA+D TKW EA P D H+++K ++ Sbjct: 4606 GYQHLYVAIDKFTKWPEAYPVIKIDKHSALKFIR 4707 Score = 40.0 bits (81), Expect(5) = 7e-37 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +1 / +1 Query: 937 REIKLILQKIVNRSRKNWSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +++K ++ + +W +L LWA T + G +P+ +VYG PLEL Sbjct: 4882 KDLKTKTYNVLKKHGDSWLEQLPAVLWANQTTPSHTTGETPFFLVYGAEADLPLEL 5049 Score = 36.3 bits (73), Expect(5) = 7e-37 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D+ L+E R + A ++++++R+H + ++ R VGD VL Sbjct: 5113 DLDYLEERRRRPALRAARYQQRLRRYHQRHVRARSLQVGDLVL 5241
>LOC_Os06g25760:12006.t02383:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6670 Score = 129 bits (277), Expect(2) = 7e-37 Identities = 53/149 (35%), Positives = 86/149 (57%) Frame = +1 / +2 Query: 658 PSSNGYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK*VIFPRFGVPRYLMTDDGSHFI 837 PSS G+ +LV DY KWVEAIP K D +I+ ++ I RFG+P+ + TD GS F+ Sbjct: 6023 PSSKGHKFILVTTDYFIKWVEAIPLKKVDSRDAIQFVEEHIIYRFGIPQAITTDQGSIFV 6202 Query: 838 HGVFRKMLAKYDVNHRVASPYHPQSSGQVELSNREIKLILQKIVNRSRKNWSSKLDDALW 1017 F + + +SPY+ Q++GQ E SN+ + ++++ ++ + W ++L +ALW Sbjct: 6203 SDEFVQFADSMGIKLLNSSPYYAQANGQAEASNKSLIKLIKQKISDYPRQWHTRLAEALW 6382 Query: 1018 AYGTAYKNPMGMSPYKMVYGKACYFPLEL 1104 +Y A + + PYK+VYG P E+ Sbjct: 6383 SYRMACHGSIQVPPYKLVYGHEAVLPWEV 6469 Score = 46.4 bits (95), Expect(2) = 7e-37 Identities = 19/76 (25%), Positives = 37/76 (48%) Frame = +1 / +2 Query: 424 EVSFEAYGGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNY 603 EV G + + + + ++G++WPT+ +D ++ C +CQ+ I + + MN Sbjct: 5783 EVHERICGTHQSAHKMKWLLRRAGYFWPTMLEDCFRYYKRCQDCQKFRAI*RAPTLAMNL 5962 Query: 604 SLVIKPFDVSGFDYMG 651 + PF G D +G Sbjct: 5963 IIKPWPFRGWGIDMIG 6010
>LOC_Os06g38420:12006.t03537:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 53.8 bits (111), Expect(7) = 8e-37 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 I RFGVP ++TD+G F GVF+ + + AS HP S+GQVE +N Sbjct: 5413 IVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 5571 Score = 41.4 bits (84), Expect(7) = 8e-37 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQ 558 G + A K + GF+WPT DA K V +C+ CQ Sbjct: 5080 GNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 5193 Score = 36.8 bits (74), Expect(7) = 8e-37 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIP 729 GYTH+ VA+D +KW+EA P Sbjct: 5308 GYTHLFVAIDKFSKWIEAKP 5367 Score = 35.9 bits (72), Expect(7) = 8e-37 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = +1 / +1 Query: 1138 NFDFKLAGEKWLFDISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 NF + E + D+ L+E R A + + + ++R+H++ ++ R F VGD VL Sbjct: 5776 NFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDLVL 5943 Score = 34.1 bits (68), Expect(7) = 8e-37 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKA 1116 W +L LW+ T G SP+ +VY P E+E ++ Sbjct: 5635 WVEQLPSVLWSLRTTPSRATGQSPFFLVYEAEAMLPSEVEFES 5763 Score = 34.1 bits (68), Expect(7) = 8e-37 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 1339 RLLSKWEGPYVIEEVYRSGAIKINNTEG 1422 +L WEGP++I EV R G+ ++ +G Sbjct: 5974 KLSPLWEGPFIISEVTRPGSYRLKREDG 6057 Score = 26.3 bits (51), Expect(7) = 8e-37 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +2 / +1 Query: 335 YFWDDPHLYKEGVDGVIRRVTEHEQGQILQK 427 Y + LYK+ G+++R E+G+ L K Sbjct: 4966 YVMHEAELYKKSPSGILQRCVSLEEGRQLLK 5058 Score = 31.8 bits (63), Expect(2) = 0.22 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 / -2 Query: 848 KTP*MKCEPSSVIKYLGTPNLGNM 777 KTP + C P SV+ LGTPNL M Sbjct: 5483 KTPPVNCLPLSVMIRLGTPNLCTM 5412 Score = 24.0 bits (46), Expect(2) = 0.22 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 671 PLELGNGPI*SKPETSNG 618 P NGP S P+T+NG Sbjct: 5306 PTAFLNGPTMSSPQTANG 5253
>LOC_Os08g34090:12008.t03149:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6000 Score = 60.2 bits (125), Expect(5) = 9e-37 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +1 / +1 Query: 445 GGYHAGDRTAHKVLQSGFYWPTLFKDARKFVLSCDECQRIGNITKRQEMPMNYSLVIKPF 624 G + AG K + GF+WPT KDA V C CQ T+ + + PF Sbjct: 5134 GSHAAGRTLVGKAFREGFFWPTALKDAYDMVQRCKACQFHSKHTRLPTQALQTIPLTWPF 5313 Query: 625 DVSGFDYMGPFPSSNG 672 G D +GPFP G Sbjct: 5314 SCWGLDILGPFPRGQG 5361 Score = 51.0 bits (105), Expect(5) = 9e-37 Identities = 24/53 (45%), Positives = 33/53 (62%) Frame = +1 / +1 Query: 778 IFPRFGVPRYLMTDDGSHFIHGVFRKMLAKYDVNHRVASPYHPQSSGQVELSN 936 IF RFG+P ++TD+GS FI+ F+ + V AS HPQS+ QVE +N Sbjct: 5467 IFCRFGLPHRIITDNGS*FINADFQDYCIRLGVKICFASVSHPQSNEQVERAN 5625 Score = 40.5 bits (82), Expect(5) = 9e-37 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = +1 / +1 Query: 1177 DISSLDEWRTQAYENAKLFKEKVKRWHDKRIQKREFNVGDYVL 1305 D++ L+E R + A +++ ++ +H+KRI+ R ++G YVL Sbjct: 5869 DVNLLEEHRERVAVQAASYQQALRHYHEKRIRARTLSIGSYVL 5997 Score = 39.6 bits (80), Expect(5) = 9e-37 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 / +1 Query: 670 GYTHVLVAVDYVTKWVEAIPTKNADHHTSIKMLK 771 GY + VA+D TKW+EA PT +IK +K Sbjct: 5362 GYRFLFVAIDKFTKWIEATPTGEIKADNAIKFIK 5463 Score = 37.3 bits (75), Expect(5) = 9e-37 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = +1 / +1 Query: 988 WSSKLDDALWAYGTAYKNPMGMSPYKMVYGKACYFPLELEHKAYWAIKELNFD 1146 W +L LWA T +P+ +VYG P EL H++ K N D Sbjct: 5689 WVEELPSILWAVRTTPTTSNKETPFFLVYGSEAMLPTELRHQSTQVQKYSNED 5847 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 967,107,628 Number of extensions: 15268917 Number of successful extensions: 88140 Number of sequences better than 10.0: 3390 Length of query: 844 Length of database: 55,613,886 Length adjustment: 52 Effective length of query: 792 Effective length of database: 52,687,430 Effective search space: 41728444560 Effective search space used: 41728444560 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
