| Clone Name | FLbaf76l04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051528.1| Oryza sativa (japonica cultivar-group) Os01g0880400 (Os01g0880400) mRNA, complete cds Length = 2044 Score = 601 bits (303), Expect = e-168 Identities = 504/571 (88%) Strand = Plus / Plus Query: 1074 caaaaagggtccgcgcaattctcaagctcgataagatggatgatattagcaggaaatggg 1133 ||||||||||||| |||||||||||||| |||||||||||| |||| ||| ||||||||| Sbjct: 1168 caaaaagggtccgagcaattctcaagcttgataagatggataatatcagccggaaatggg 1227 Query: 1134 cgaatgccgacgtgcttattttcaattcagggcattggtggactcccagcaaattatttg 1193 |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1228 agaatgctgatgtgcttattttcaactcagggcattggtggactcccagcaaattatttg 1287 Query: 1194 acatgggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctg 1253 | ||||| || ||||||||||||||||| ||||||||||| || || || ||||||||| Sbjct: 1288 atatgggctgctattttgaggctggaggtttgcttaaactaggtacatccattaattctg 1347 Query: 1254 ctttcaaaatggcactggaaacatgggcttcatgggtcaaggaaaaagtggatttaaaac 1313 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1348 ctttcaaaatggcacttgaaacatgggcttcatgggtgaaggaaaaggtggatttaaaac 1407 Query: 1314 gaacacgtgtcttcttccggacatatgaaccttctcattggagtggcttgaaccaaaaag 1373 |||||| |||||| ||||| || ||||| || |||||||||||||| | || ||||| | Sbjct: 1408 gaacacatgtctttttccgcacgtatgagccatctcattggagtggttcaaatcaaaagg 1467 Query: 1374 tatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagtgaattta 1433 |||| |||||||||||| |||||| ||||||||| ||||| |||||| ||||||||| Sbjct: 1468 tatgtgaagtaacagaatttcctacagctgaggccaaaggagatgacagaagtgaatttg 1527 Query: 1434 gggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactgaatgtga 1493 | |||||||| |||| ||||| | ||||||||||||||||| ||||| ||||||||| Sbjct: 1528 gagatatactcgctggggttgtggtgaacatgagcgttcctgcaactatcttgaatgtga 1587 Query: 1494 ctttgatgggggccttcaggagtgatgcgcatattggtatttggagtcacccttctacca 1553 ||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 1588 ctttgatgggggccttcagaagtgatgctcatatcggtatatggagtcatccttcaacca 1647 Query: 1554 tacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgagctaatat 1613 ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||| || Sbjct: 1648 tacttgattgcagtcattggtgccttcctggagtcccagatgcttggaatgaactagtaa 1707 Query: 1614 tttctcaccttttgacggatggttggcgaaa 1644 |||| ||||||||||| ||||||||||||| Sbjct: 1708 tttcccaccttttgacaaatggttggcgaaa 1738 Score = 381 bits (192), Expect = e-102 Identities = 446/531 (83%), Gaps = 6/531 (1%) Strand = Plus / Plus Query: 531 cctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacctgggcc 590 |||||||||||||||||||| |||||| || || || ||| ||| |||||||| ||||| Sbjct: 634 cctccgtcgcgctcgtgctcgcctgcgcgctgtatctgtatctcttccggtaccagggcc 693 Query: 591 agggccagggccgcgcggtggccgagttcgccggcgacaatctggactcctgcaacgtgt 650 ||||| | |||| |||||||||||||||||||| || || |||||| |||||| Sbjct: 694 gcggccatg------cggtcgccgagttcgccggcgacaacctagagtcctgcgacgtgt 747 Query: 651 tcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagtgcccgt 710 ||||||| |||||||||| ||| ||||||||| ||||||| |||||||| ||||||| Sbjct: 748 tcgacggaagctgggtgccggacaggaggtaccctttgtacaatagctccgattgcccgt 807 Query: 711 ttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacctcaagt 770 ||| ||||||||| ||||| ||||| || ||||| |||| | ||||| ||||| || | Sbjct: 808 ttgtggagaggggattcaattgcctggcaaatgggaggaaggacaccggctacctgaaat 867 Query: 771 ggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgctggagt 830 ||||||||||||| || |||||||| ||||||| ||||||||| || ||| |||| Sbjct: 868 ggcggtggaagccaaggggatgcgacttgccgcggttcagtgccagggatgtgttggaac 927 Query: 831 ggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagt 890 |||| || |||||||||||||||||||||||||| || |||||||| ||||||||||| | Sbjct: 928 ggctgagggggaagagggttgtgtttgtgggggactccatgagccggacacagtgggaat 987 Query: 891 ccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgaggtgaatg 950 | |||||||||||||||||| |||||||||| ||||||| | ||||||||||| |||| Sbjct: 988 ctttcatctgcatgctcatggcaggggtggagaatcccaagactgtttatgaggttaatg 1047 Query: 951 gcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattcaacctca 1010 |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||| | Sbjct: 1048 gcaatcagatctcaaagactatccggtttttaggagtgagatttgcgtcattcaacctga 1107 Query: 1011 gtgtggagttctttcggtcggttttccttgtacagcagacccctgcccctc 1061 ||| |||||||| |||||||| || |||||||| |||| |||||| |||| Sbjct: 1108 atgtagagttcttccggtcggtgtttcttgtacaacagagccctgcacctc 1158 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Plus Query: 372 gcggtggcgagatggtgaccgctagcttcagccggagcacgtcggcgcggctcacagcga 431 |||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 460 gcggcggcgagatggtgaccgggagctttagcaggagcacgtcggcgcggctcacagcga 519 Query: 432 ggggcggcgtagggagcccccgggt 456 |||||||||| |||||||| ||||| Sbjct: 520 ggggcggcgtcgggagcccgcgggt 544 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 ccgctccggcgatcgccggaga 149 |||||||||||||||||||||| Sbjct: 155 ccgctccggcgatcgccggaga 176
>dbj|AK066678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070A21, full insert sequence Length = 2046 Score = 601 bits (303), Expect = e-168 Identities = 504/571 (88%) Strand = Plus / Plus Query: 1074 caaaaagggtccgcgcaattctcaagctcgataagatggatgatattagcaggaaatggg 1133 ||||||||||||| |||||||||||||| |||||||||||| |||| ||| ||||||||| Sbjct: 1169 caaaaagggtccgagcaattctcaagcttgataagatggataatatcagccggaaatggg 1228 Query: 1134 cgaatgccgacgtgcttattttcaattcagggcattggtggactcccagcaaattatttg 1193 |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1229 agaatgctgatgtgcttattttcaactcagggcattggtggactcccagcaaattatttg 1288 Query: 1194 acatgggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctg 1253 | ||||| || ||||||||||||||||| ||||||||||| || || || ||||||||| Sbjct: 1289 atatgggctgctattttgaggctggaggtttgcttaaactaggtacatccattaattctg 1348 Query: 1254 ctttcaaaatggcactggaaacatgggcttcatgggtcaaggaaaaagtggatttaaaac 1313 |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1349 ctttcaaaatggcacttgaaacatgggcttcatgggtgaaggaaaaggtggatttaaaac 1408 Query: 1314 gaacacgtgtcttcttccggacatatgaaccttctcattggagtggcttgaaccaaaaag 1373 |||||| |||||| ||||| || ||||| || |||||||||||||| | || ||||| | Sbjct: 1409 gaacacatgtctttttccgcacgtatgagccatctcattggagtggttcaaatcaaaagg 1468 Query: 1374 tatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagtgaattta 1433 |||| |||||||||||| |||||| ||||||||| ||||| |||||| ||||||||| Sbjct: 1469 tatgtgaagtaacagaatttcctacagctgaggccaaaggagatgacagaagtgaatttg 1528 Query: 1434 gggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactgaatgtga 1493 | |||||||| |||| ||||| | ||||||||||||||||| ||||| ||||||||| Sbjct: 1529 gagatatactcgctggggttgtggtgaacatgagcgttcctgcaactatcttgaatgtga 1588 Query: 1494 ctttgatgggggccttcaggagtgatgcgcatattggtatttggagtcacccttctacca 1553 ||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||| |||| Sbjct: 1589 ctttgatgggggccttcagaagtgatgctcatatcggtatatggagtcatccttcaacca 1648 Query: 1554 tacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgagctaatat 1613 ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||| || Sbjct: 1649 tacttgattgcagtcattggtgccttcctggagtcccagatgcttggaatgaactagtaa 1708 Query: 1614 tttctcaccttttgacggatggttggcgaaa 1644 |||| ||||||||||| ||||||||||||| Sbjct: 1709 tttcccaccttttgacaaatggttggcgaaa 1739 Score = 381 bits (192), Expect = e-102 Identities = 446/531 (83%), Gaps = 6/531 (1%) Strand = Plus / Plus Query: 531 cctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacctgggcc 590 |||||||||||||||||||| |||||| || || || ||| ||| |||||||| ||||| Sbjct: 635 cctccgtcgcgctcgtgctcgcctgcgcgctgtatctgtatctcttccggtaccagggcc 694 Query: 591 agggccagggccgcgcggtggccgagttcgccggcgacaatctggactcctgcaacgtgt 650 ||||| | |||| |||||||||||||||||||| || || |||||| |||||| Sbjct: 695 gcggccatg------cggtcgccgagttcgccggcgacaacctagagtcctgcgacgtgt 748 Query: 651 tcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagtgcccgt 710 ||||||| |||||||||| ||| ||||||||| ||||||| |||||||| ||||||| Sbjct: 749 tcgacggaagctgggtgccggacaggaggtaccctttgtacaatagctccgattgcccgt 808 Query: 711 ttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacctcaagt 770 ||| ||||||||| ||||| ||||| || ||||| |||| | ||||| ||||| || | Sbjct: 809 ttgtggagaggggattcaattgcctggcaaatgggaggaaggacaccggctacctgaaat 868 Query: 771 ggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgctggagt 830 ||||||||||||| || |||||||| ||||||| ||||||||| || ||| |||| Sbjct: 869 ggcggtggaagccaaggggatgcgacttgccgcggttcagtgccagggatgtgttggaac 928 Query: 831 ggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagt 890 |||| || |||||||||||||||||||||||||| || |||||||| ||||||||||| | Sbjct: 929 ggctgagggggaagagggttgtgtttgtgggggactccatgagccggacacagtgggaat 988 Query: 891 ccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgaggtgaatg 950 | |||||||||||||||||| |||||||||| ||||||| | ||||||||||| |||| Sbjct: 989 ctttcatctgcatgctcatggcaggggtggagaatcccaagactgtttatgaggttaatg 1048 Query: 951 gcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattcaacctca 1010 |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||| | Sbjct: 1049 gcaatcagatctcaaagactatccggtttttaggagtgagatttgcgtcattcaacctga 1108 Query: 1011 gtgtggagttctttcggtcggttttccttgtacagcagacccctgcccctc 1061 ||| |||||||| |||||||| || |||||||| |||| |||||| |||| Sbjct: 1109 atgtagagttcttccggtcggtgtttcttgtacaacagagccctgcacctc 1159 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Plus Query: 372 gcggtggcgagatggtgaccgctagcttcagccggagcacgtcggcgcggctcacagcga 431 |||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 461 gcggcggcgagatggtgaccgggagctttagcaggagcacgtcggcgcggctcacagcga 520 Query: 432 ggggcggcgtagggagcccccgggt 456 |||||||||| |||||||| ||||| Sbjct: 521 ggggcggcgtcgggagcccgcgggt 545 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 ccgctccggcgatcgccggaga 149 |||||||||||||||||||||| Sbjct: 156 ccgctccggcgatcgccggaga 177
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 381 bits (192), Expect = e-102 Identities = 446/531 (83%), Gaps = 6/531 (1%) Strand = Plus / Minus Query: 531 cctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacctgggcc 590 |||||||||||||||||||| |||||| || || || ||| ||| |||||||| ||||| Sbjct: 38209760 cctccgtcgcgctcgtgctcgcctgcgcgctgtatctgtatctcttccggtaccagggcc 38209701 Query: 591 agggccagggccgcgcggtggccgagttcgccggcgacaatctggactcctgcaacgtgt 650 ||||| | |||| |||||||||||||||||||| || || |||||| |||||| Sbjct: 38209700 gcggccatg------cggtcgccgagttcgccggcgacaacctagagtcctgcgacgtgt 38209647 Query: 651 tcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagtgcccgt 710 ||||||| |||||||||| ||| ||||||||| ||||||| |||||||| ||||||| Sbjct: 38209646 tcgacggaagctgggtgccggacaggaggtaccctttgtacaatagctccgattgcccgt 38209587 Query: 711 ttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacctcaagt 770 ||| ||||||||| ||||| ||||| || ||||| |||| | ||||| ||||| || | Sbjct: 38209586 ttgtggagaggggattcaattgcctggcaaatgggaggaaggacaccggctacctgaaat 38209527 Query: 771 ggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgctggagt 830 ||||||||||||| || |||||||| ||||||| ||||||||| || ||| |||| Sbjct: 38209526 ggcggtggaagccaaggggatgcgacttgccgcggttcagtgccagggatgtgttggaac 38209467 Query: 831 ggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagt 890 |||| || |||||||||||||||||||||||||| || |||||||| ||||||||||| | Sbjct: 38209466 ggctgagggggaagagggttgtgtttgtgggggactccatgagccggacacagtgggaat 38209407 Query: 891 ccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgaggtgaatg 950 | |||||||||||||||||| |||||||||| ||||||| | ||||||||||| |||| Sbjct: 38209406 ctttcatctgcatgctcatggcaggggtggagaatcccaagactgtttatgaggttaatg 38209347 Query: 951 gcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattcaacctca 1010 |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||| | Sbjct: 38209346 gcaatcagatctcaaagactatccggtttttaggagtgagatttgcgtcattcaacctga 38209287 Query: 1011 gtgtggagttctttcggtcggttttccttgtacagcagacccctgcccctc 1061 ||| |||||||| |||||||| || |||||||| |||| |||||| |||| Sbjct: 38209286 atgtagagttcttccggtcggtgtttcttgtacaacagagccctgcacctc 38209236 Score = 252 bits (127), Expect = 4e-63 Identities = 229/263 (87%) Strand = Plus / Minus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| |||||| ||||||||| ||||| |||||| ||| Sbjct: 38208075 caaaaggtatgtgaagtaacagaatttcctacagctgaggccaaaggagatgacagaagt 38208016 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| | |||||||| |||| ||||| | ||||||||||||||||| ||||| || Sbjct: 38208015 gaatttggagatatactcgctggggttgtggtgaacatgagcgttcctgcaactatcttg 38207956 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||| Sbjct: 38207955 aatgtgactttgatgggggccttcagaagtgatgctcatatcggtatatggagtcatcct 38207896 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 38207895 tcaaccatacttgattgcagtcattggtgccttcctggagtcccagatgcttggaatgaa 38207836 Query: 1607 ctaatattttctcaccttttgac 1629 ||| || |||| ||||||||||| Sbjct: 38207835 ctagtaatttcccaccttttgac 38207813 Score = 182 bits (92), Expect = 3e-42 Identities = 137/152 (90%) Strand = Plus / Minus Query: 1205 tattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgctttcaaaatg 1264 ||||||||||||||||| ||||||||||| || || || |||||||||||||||||||| Sbjct: 38208410 tattttgaggctggaggtttgcttaaactaggtacatccattaattctgctttcaaaatg 38208351 Query: 1265 gcactggaaacatgggcttcatgggtcaaggaaaaagtggatttaaaacgaacacgtgtc 1324 ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| Sbjct: 38208350 gcacttgaaacatgggcttcatgggtgaaggaaaaggtggatttaaaacgaacacatgtc 38208291 Query: 1325 ttcttccggacatatgaaccttctcattggag 1356 || ||||| || ||||| || ||||||||||| Sbjct: 38208290 tttttccgcacgtatgagccatctcattggag 38208259 Score = 168 bits (85), Expect = 5e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 1074 caaaaagggtccgcgcaattctcaagctcgataagatggatgatattagcaggaaatggg 1133 ||||||||||||| |||||||||||||| |||||||||||| |||| ||| ||||||||| Sbjct: 38209226 caaaaagggtccgagcaattctcaagcttgataagatggataatatcagccggaaatggg 38209167 Query: 1134 cgaatgccgacgtgcttattttcaattcagggcattggtggactcccagcaaattatttg 1193 |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 38209166 agaatgctgatgtgcttattttcaactcagggcattggtggactcccagcaaattatttg 38209107 Query: 1194 a 1194 | Sbjct: 38209106 a 38209106 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 372 gcggtggcgagatggtgaccgctagcttcagccggagcacgtcggcgcggctcacagcga 431 |||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 38209934 gcggcggcgagatggtgaccgggagctttagcaggagcacgtcggcgcggctcacagcga 38209875 Query: 432 ggggcggcgtagggagcccccgggt 456 |||||||||| |||||||| ||||| Sbjct: 38209874 ggggcggcgtcgggagcccgcgggt 38209850 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 758 gagtacctcaagtggcggtggaagccg 784 |||| |||||||||||||||||||||| Sbjct: 26409167 gagttcctcaagtggcggtggaagccg 26409141 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 ccgctccggcgatcgccggaga 149 |||||||||||||||||||||| Sbjct: 38210239 ccgctccggcgatcgccggaga 38210218 Score = 42.1 bits (21), Expect = 7.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1139 gccgacgtgcttattttcaattcagggcattggtgga 1175 ||||||||||| | |||||| ||||||||||||||| Sbjct: 16886615 gccgacgtgctcgtgttcaatacagggcattggtgga 16886579
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 381 bits (192), Expect = e-102 Identities = 446/531 (83%), Gaps = 6/531 (1%) Strand = Plus / Minus Query: 531 cctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacctgggcc 590 |||||||||||||||||||| |||||| || || || ||| ||| |||||||| ||||| Sbjct: 128994 cctccgtcgcgctcgtgctcgcctgcgcgctgtatctgtatctcttccggtaccagggcc 128935 Query: 591 agggccagggccgcgcggtggccgagttcgccggcgacaatctggactcctgcaacgtgt 650 ||||| | |||| |||||||||||||||||||| || || |||||| |||||| Sbjct: 128934 gcggccatg------cggtcgccgagttcgccggcgacaacctagagtcctgcgacgtgt 128881 Query: 651 tcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagtgcccgt 710 ||||||| |||||||||| ||| ||||||||| ||||||| |||||||| ||||||| Sbjct: 128880 tcgacggaagctgggtgccggacaggaggtaccctttgtacaatagctccgattgcccgt 128821 Query: 711 ttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacctcaagt 770 ||| ||||||||| ||||| ||||| || ||||| |||| | ||||| ||||| || | Sbjct: 128820 ttgtggagaggggattcaattgcctggcaaatgggaggaaggacaccggctacctgaaat 128761 Query: 771 ggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgctggagt 830 ||||||||||||| || |||||||| ||||||| ||||||||| || ||| |||| Sbjct: 128760 ggcggtggaagccaaggggatgcgacttgccgcggttcagtgccagggatgtgttggaac 128701 Query: 831 ggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagt 890 |||| || |||||||||||||||||||||||||| || |||||||| ||||||||||| | Sbjct: 128700 ggctgagggggaagagggttgtgtttgtgggggactccatgagccggacacagtgggaat 128641 Query: 891 ccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgaggtgaatg 950 | |||||||||||||||||| |||||||||| ||||||| | ||||||||||| |||| Sbjct: 128640 ctttcatctgcatgctcatggcaggggtggagaatcccaagactgtttatgaggttaatg 128581 Query: 951 gcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattcaacctca 1010 |||| |||||||| ||||| ||||||||||||||||||||||| | |||||||||||| | Sbjct: 128580 gcaatcagatctcaaagactatccggtttttaggagtgagatttgcgtcattcaacctga 128521 Query: 1011 gtgtggagttctttcggtcggttttccttgtacagcagacccctgcccctc 1061 ||| |||||||| |||||||| || |||||||| |||| |||||| |||| Sbjct: 128520 atgtagagttcttccggtcggtgtttcttgtacaacagagccctgcacctc 128470 Score = 252 bits (127), Expect = 4e-63 Identities = 229/263 (87%) Strand = Plus / Minus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| |||||| ||||||||| ||||| |||||| ||| Sbjct: 127309 caaaaggtatgtgaagtaacagaatttcctacagctgaggccaaaggagatgacagaagt 127250 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| | |||||||| |||| ||||| | ||||||||||||||||| ||||| || Sbjct: 127249 gaatttggagatatactcgctggggttgtggtgaacatgagcgttcctgcaactatcttg 127190 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||| Sbjct: 127189 aatgtgactttgatgggggccttcagaagtgatgctcatatcggtatatggagtcatcct 127130 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 127129 tcaaccatacttgattgcagtcattggtgccttcctggagtcccagatgcttggaatgaa 127070 Query: 1607 ctaatattttctcaccttttgac 1629 ||| || |||| ||||||||||| Sbjct: 127069 ctagtaatttcccaccttttgac 127047 Score = 182 bits (92), Expect = 3e-42 Identities = 137/152 (90%) Strand = Plus / Minus Query: 1205 tattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgctttcaaaatg 1264 ||||||||||||||||| ||||||||||| || || || |||||||||||||||||||| Sbjct: 127644 tattttgaggctggaggtttgcttaaactaggtacatccattaattctgctttcaaaatg 127585 Query: 1265 gcactggaaacatgggcttcatgggtcaaggaaaaagtggatttaaaacgaacacgtgtc 1324 ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| Sbjct: 127584 gcacttgaaacatgggcttcatgggtgaaggaaaaggtggatttaaaacgaacacatgtc 127525 Query: 1325 ttcttccggacatatgaaccttctcattggag 1356 || ||||| || ||||| || ||||||||||| Sbjct: 127524 tttttccgcacgtatgagccatctcattggag 127493 Score = 168 bits (85), Expect = 5e-38 Identities = 112/121 (92%) Strand = Plus / Minus Query: 1074 caaaaagggtccgcgcaattctcaagctcgataagatggatgatattagcaggaaatggg 1133 ||||||||||||| |||||||||||||| |||||||||||| |||| ||| ||||||||| Sbjct: 128460 caaaaagggtccgagcaattctcaagcttgataagatggataatatcagccggaaatggg 128401 Query: 1134 cgaatgccgacgtgcttattttcaattcagggcattggtggactcccagcaaattatttg 1193 |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 128400 agaatgctgatgtgcttattttcaactcagggcattggtggactcccagcaaattatttg 128341 Query: 1194 a 1194 | Sbjct: 128340 a 128340 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 372 gcggtggcgagatggtgaccgctagcttcagccggagcacgtcggcgcggctcacagcga 431 |||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct: 129168 gcggcggcgagatggtgaccgggagctttagcaggagcacgtcggcgcggctcacagcga 129109 Query: 432 ggggcggcgtagggagcccccgggt 456 |||||||||| |||||||| ||||| Sbjct: 129108 ggggcggcgtcgggagcccgcgggt 129084 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 128 ccgctccggcgatcgccggaga 149 |||||||||||||||||||||| Sbjct: 129473 ccgctccggcgatcgccggaga 129452
>ref|NM_001062136.1| Oryza sativa (japonica cultivar-group) Os05g0426300 (Os05g0426300) mRNA, complete cds Length = 1913 Score = 214 bits (108), Expect = 9e-52 Identities = 330/404 (81%) Strand = Plus / Plus Query: 645 acgtgttcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagt 704 |||||||||||||| |||||||| || | ||||||| |||||||||||||| || Sbjct: 608 acgtgttcgacggcgcctgggtgcccgacgccgggtacccgctgtacaacagctcgctgt 667 Query: 705 gcccgtttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacc 764 ||||||| |||||| | |||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 668 gcccgttcgcggagcgcgggttcaactgcctggccaacgggcggagggacaccgggtacc 727 Query: 765 tcaagtggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgc 824 ||||||||||||||||||||||||| |||||| |||| | |||| ||||| || || Sbjct: 728 tcaagtggcggtggaagccgcggcggtgcgacgcgccgaggttcaccgcccgcgccgcgc 787 Query: 825 tggagtggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagt 884 ||||| |||| | |||||| |||| ||||| |||||||| || |||||||| || |||| Sbjct: 788 tggagcggctgcgcgggaagcgggtcgtgttcgtgggggactccatgagccgcacgcagt 847 Query: 885 gggagtccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgagg 944 |||||||||||||||||||||||||| | || |||||||| ||||| | ||| || |||| Sbjct: 848 gggagtccttcatctgcatgctcatggccggcgtggacgaccccaagacggtgtacgagg 907 Query: 945 tgaatggcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattca 1004 |||| || ||| ||||| | |||||||| |||| || | ||||| |||| ||| ||| Sbjct: 908 tgaacgggaacgagatcaccaagacgatacggtccttggcggtgaggttcgcgtcgttcg 967 Query: 1005 acctcagtgtggagttctttcggtcggttttccttgtacagcag 1048 |||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 968 acctcaccgtggagttcttccgctcggtgttcctcgtccagcag 1011 Score = 184 bits (93), Expect = 8e-43 Identities = 429/541 (79%) Strand = Plus / Plus Query: 1110 tggatgatattagcaggaaatgggcgaatgccgacgtgcttattttcaattcagggcatt 1169 ||||| |||| ||||||||||||| |||| | || ||| | ||||||| | || || | Sbjct: 1070 tggataatatcagcaggaaatgggtgaattcagatgtgttggttttcaacaccggccact 1129 Query: 1170 ggtggactcccagcaaattatttgacatgggttgttattttgaggctggaggcttgctta 1229 |||||||||| | |||||| ||||| ||||||||||||||| || ||||| | |||||| Sbjct: 1130 ggtggactccgaccaaattgtttgagatgggttgttattttcagtctggacgagtgctta 1189 Query: 1230 aacttggaacgtcagttaattctgctttcaaaatggcactggaaacatgggcttcatggg 1289 |||| ||||| || || | ||||||||| | |||| |||| || ||||||||||||| Sbjct: 1190 aactaggaacatctgtcgaggctgctttcaggacggcattggagacctgggcttcatggg 1249 Query: 1290 tcaaggaaaaagtggatttaaaacgaacacgtgtcttcttccggacatatgaaccttctc 1349 | | ||| | | |||||||| |||| | ||| |||||||| |||||||| || || | Sbjct: 1250 ttgaaaaaagaatcgatttaaacagaactcatgttttcttccgaacatatgagccgtccc 1309 Query: 1350 attggagtggcttgaaccaaaaagtatgcgaagtaacagaaagacctacaactgaggcca 1409 | ||||||| || ||||| ||||| |||||||||||| ||| || | ||||||| Sbjct: 1310 actggagtgatacaaatcaaaaggtatgtgaagtaacagaacagccttcatcagaggcca 1369 Query: 1410 taggagctgacaggagtgaatttagggatatacttgctgatgttgttgcgaacatgagcg 1469 |||| ||| | |||||||||| || ||||||||| |||||||| || ||||||| | Sbjct: 1370 aaggaaatgataagagtgaatttgggactatacttgccgatgttgtggcaaacatgaaag 1429 Query: 1470 ttcctgtcactatactgaatgtgactttgatgggggccttcaggagtgatgcgcatattg 1529 |||||||||| |||| || |||||||| ||||| || ||| | |||||||| ||| ||| Sbjct: 1430 ctcctgtcactctactaaacgtgactttaatgggagcattccgaagtgatgctcatgttg 1489 Query: 1530 gtatttggagtcacccttctaccatacttgattgcagccattggtgtcttcccggagttc 1589 | | |||||| | ||| | || ||||||||||||||||||||||||| || ||||||| Sbjct: 1490 gcacctggagttatcctcccactgtacttgattgcagccattggtgtctccctggagttc 1549 Query: 1590 cagatgcttggaatgagctaatattttctcaccttttgacggatggttggcgaaagctgg 1649 | |||||||||||||| || ||||||| ||||||| || |||||||||||||| ||| Sbjct: 1550 ctgatgcttggaatgaactggtattttcataccttttaacaaatggttggcgaaagatgg 1609 Query: 1650 c 1650 | Sbjct: 1610 c 1610 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 526 cctggcctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacct 585 |||||||||||| ||||||||||| ||||||| || |||||||| || | ||||||||| Sbjct: 495 cctggcctccgtggcgctcgtgctgtcctgcgcgctctacctctacgtgttccggtacct 554 Query: 586 gggcc 590 |||| Sbjct: 555 cggcc 559
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 214 bits (108), Expect = 9e-52 Identities = 330/404 (81%) Strand = Plus / Plus Query: 645 acgtgttcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagt 704 |||||||||||||| |||||||| || | ||||||| |||||||||||||| || Sbjct: 63686 acgtgttcgacggcgcctgggtgcccgacgccgggtacccgctgtacaacagctcgctgt 63745 Query: 705 gcccgtttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacc 764 ||||||| |||||| | |||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 63746 gcccgttcgcggagcgcgggttcaactgcctggccaacgggcggagggacaccgggtacc 63805 Query: 765 tcaagtggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgc 824 ||||||||||||||||||||||||| |||||| |||| | |||| ||||| || || Sbjct: 63806 tcaagtggcggtggaagccgcggcggtgcgacgcgccgaggttcaccgcccgcgccgcgc 63865 Query: 825 tggagtggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagt 884 ||||| |||| | |||||| |||| ||||| |||||||| || |||||||| || |||| Sbjct: 63866 tggagcggctgcgcgggaagcgggtcgtgttcgtgggggactccatgagccgcacgcagt 63925 Query: 885 gggagtccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgagg 944 |||||||||||||||||||||||||| | || |||||||| ||||| | ||| || |||| Sbjct: 63926 gggagtccttcatctgcatgctcatggccggcgtggacgaccccaagacggtgtacgagg 63985 Query: 945 tgaatggcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattca 1004 |||| || ||| ||||| | |||||||| |||| || | ||||| |||| ||| ||| Sbjct: 63986 tgaacgggaacgagatcaccaagacgatacggtccttggcggtgaggttcgcgtcgttcg 64045 Query: 1005 acctcagtgtggagttctttcggtcggttttccttgtacagcag 1048 |||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 64046 acctcaccgtggagttcttccgctcggtgttcctcgtccagcag 64089 Score = 127 bits (64), Expect = 2e-25 Identities = 211/260 (81%) Strand = Plus / Plus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| ||| || | ||||||| |||| ||| | |||| Sbjct: 66128 caaaaggtatgtgaagtaacagaacagccttcatcagaggccaaaggaaatgataagagt 66187 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| || ||||||||| |||||||| || ||||||| | |||||||||| |||| Sbjct: 66188 gaatttgggactatacttgccgatgttgtggcaaacatgaaagctcctgtcactctacta 66247 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 || |||||||| ||||| || ||| | |||||||| ||| |||| | |||||| | ||| Sbjct: 66248 aacgtgactttaatgggagcattccgaagtgatgctcatgttggcacctggagttatcct 66307 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 | || ||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 66308 cccactgtacttgattgcagccattggtgtctccctggagttcctgatgcttggaatgaa 66367 Query: 1607 ctaatattttctcacctttt 1626 || ||||||| ||||||| Sbjct: 66368 ctggtattttcatacctttt 66387 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 526 cctggcctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacct 585 |||||||||||| ||||||||||| ||||||| || |||||||| || | ||||||||| Sbjct: 63573 cctggcctccgtggcgctcgtgctgtcctgcgcgctctacctctacgtgttccggtacct 63632 Query: 586 gggcc 590 |||| Sbjct: 63633 cggcc 63637 Score = 42.1 bits (21), Expect = 7.6 Identities = 75/93 (80%) Strand = Plus / Plus Query: 1198 gggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgcttt 1257 ||||||||||||| || ||||| | |||||||||| ||||| || || | ||||||| Sbjct: 64931 gggttgttattttcagtctggacgagtgcttaaactaggaacatctgtcgaggctgcttt 64990 Query: 1258 caaaatggcactggaaacatgggcttcatgggt 1290 || | |||| |||| || |||||||||||||| Sbjct: 64991 caggacggcattggagacctgggcttcatgggt 65023
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 214 bits (108), Expect = 9e-52 Identities = 330/404 (81%) Strand = Plus / Plus Query: 645 acgtgttcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagt 704 |||||||||||||| |||||||| || | ||||||| |||||||||||||| || Sbjct: 6267 acgtgttcgacggcgcctgggtgcccgacgccgggtacccgctgtacaacagctcgctgt 6326 Query: 705 gcccgtttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacc 764 ||||||| |||||| | |||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 6327 gcccgttcgcggagcgcgggttcaactgcctggccaacgggcggagggacaccgggtacc 6386 Query: 765 tcaagtggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgc 824 ||||||||||||||||||||||||| |||||| |||| | |||| ||||| || || Sbjct: 6387 tcaagtggcggtggaagccgcggcggtgcgacgcgccgaggttcaccgcccgcgccgcgc 6446 Query: 825 tggagtggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagt 884 ||||| |||| | |||||| |||| ||||| |||||||| || |||||||| || |||| Sbjct: 6447 tggagcggctgcgcgggaagcgggtcgtgttcgtgggggactccatgagccgcacgcagt 6506 Query: 885 gggagtccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgagg 944 |||||||||||||||||||||||||| | || |||||||| ||||| | ||| || |||| Sbjct: 6507 gggagtccttcatctgcatgctcatggccggcgtggacgaccccaagacggtgtacgagg 6566 Query: 945 tgaatggcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattca 1004 |||| || ||| ||||| | |||||||| |||| || | ||||| |||| ||| ||| Sbjct: 6567 tgaacgggaacgagatcaccaagacgatacggtccttggcggtgaggttcgcgtcgttcg 6626 Query: 1005 acctcagtgtggagttctttcggtcggttttccttgtacagcag 1048 |||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 6627 acctcaccgtggagttcttccgctcggtgttcctcgtccagcag 6670 Score = 127 bits (64), Expect = 2e-25 Identities = 211/260 (81%) Strand = Plus / Plus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| ||| || | ||||||| |||| ||| | |||| Sbjct: 8709 caaaaggtatgtgaagtaacagaacagccttcatcagaggccaaaggaaatgataagagt 8768 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| || ||||||||| |||||||| || ||||||| | |||||||||| |||| Sbjct: 8769 gaatttgggactatacttgccgatgttgtggcaaacatgaaagctcctgtcactctacta 8828 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 || |||||||| ||||| || ||| | |||||||| ||| |||| | |||||| | ||| Sbjct: 8829 aacgtgactttaatgggagcattccgaagtgatgctcatgttggcacctggagttatcct 8888 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 | || ||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 8889 cccactgtacttgattgcagccattggtgtctccctggagttcctgatgcttggaatgaa 8948 Query: 1607 ctaatattttctcacctttt 1626 || ||||||| ||||||| Sbjct: 8949 ctggtattttcatacctttt 8968 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 526 cctggcctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacct 585 |||||||||||| ||||||||||| ||||||| || |||||||| || | ||||||||| Sbjct: 6154 cctggcctccgtggcgctcgtgctgtcctgcgcgctctacctctacgtgttccggtacct 6213 Query: 586 gggcc 590 |||| Sbjct: 6214 cggcc 6218 Score = 42.1 bits (21), Expect = 7.6 Identities = 75/93 (80%) Strand = Plus / Plus Query: 1198 gggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgcttt 1257 ||||||||||||| || ||||| | |||||||||| ||||| || || | ||||||| Sbjct: 7512 gggttgttattttcagtctggacgagtgcttaaactaggaacatctgtcgaggctgcttt 7571 Query: 1258 caaaatggcactggaaacatgggcttcatgggt 1290 || | |||| |||| || |||||||||||||| Sbjct: 7572 caggacggcattggagacctgggcttcatgggt 7604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 214 bits (108), Expect = 9e-52 Identities = 330/404 (81%) Strand = Plus / Plus Query: 645 acgtgttcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagt 704 |||||||||||||| |||||||| || | ||||||| |||||||||||||| || Sbjct: 20750462 acgtgttcgacggcgcctgggtgcccgacgccgggtacccgctgtacaacagctcgctgt 20750521 Query: 705 gcccgtttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacc 764 ||||||| |||||| | |||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 20750522 gcccgttcgcggagcgcgggttcaactgcctggccaacgggcggagggacaccgggtacc 20750581 Query: 765 tcaagtggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgc 824 ||||||||||||||||||||||||| |||||| |||| | |||| ||||| || || Sbjct: 20750582 tcaagtggcggtggaagccgcggcggtgcgacgcgccgaggttcaccgcccgcgccgcgc 20750641 Query: 825 tggagtggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagt 884 ||||| |||| | |||||| |||| ||||| |||||||| || |||||||| || |||| Sbjct: 20750642 tggagcggctgcgcgggaagcgggtcgtgttcgtgggggactccatgagccgcacgcagt 20750701 Query: 885 gggagtccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgagg 944 |||||||||||||||||||||||||| | || |||||||| ||||| | ||| || |||| Sbjct: 20750702 gggagtccttcatctgcatgctcatggccggcgtggacgaccccaagacggtgtacgagg 20750761 Query: 945 tgaatggcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattca 1004 |||| || ||| ||||| | |||||||| |||| || | ||||| |||| ||| ||| Sbjct: 20750762 tgaacgggaacgagatcaccaagacgatacggtccttggcggtgaggttcgcgtcgttcg 20750821 Query: 1005 acctcagtgtggagttctttcggtcggttttccttgtacagcag 1048 |||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 20750822 acctcaccgtggagttcttccgctcggtgttcctcgtccagcag 20750865 Score = 127 bits (64), Expect = 2e-25 Identities = 211/260 (81%) Strand = Plus / Plus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| ||| || | ||||||| |||| ||| | |||| Sbjct: 20752904 caaaaggtatgtgaagtaacagaacagccttcatcagaggccaaaggaaatgataagagt 20752963 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| || ||||||||| |||||||| || ||||||| | |||||||||| |||| Sbjct: 20752964 gaatttgggactatacttgccgatgttgtggcaaacatgaaagctcctgtcactctacta 20753023 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 || |||||||| ||||| || ||| | |||||||| ||| |||| | |||||| | ||| Sbjct: 20753024 aacgtgactttaatgggagcattccgaagtgatgctcatgttggcacctggagttatcct 20753083 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 | || ||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 20753084 cccactgtacttgattgcagccattggtgtctccctggagttcctgatgcttggaatgaa 20753143 Query: 1607 ctaatattttctcacctttt 1626 || ||||||| ||||||| Sbjct: 20753144 ctggtattttcatacctttt 20753163 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 526 cctggcctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacct 585 |||||||||||| ||||||||||| ||||||| || |||||||| || | ||||||||| Sbjct: 20750349 cctggcctccgtggcgctcgtgctgtcctgcgcgctctacctctacgtgttccggtacct 20750408 Query: 586 gggcc 590 |||| Sbjct: 20750409 cggcc 20750413 Score = 42.1 bits (21), Expect = 7.6 Identities = 75/93 (80%) Strand = Plus / Plus Query: 1198 gggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgcttt 1257 ||||||||||||| || ||||| | |||||||||| ||||| || || | ||||||| Sbjct: 20751707 gggttgttattttcagtctggacgagtgcttaaactaggaacatctgtcgaggctgcttt 20751766 Query: 1258 caaaatggcactggaaacatgggcttcatgggt 1290 || | |||| |||| || |||||||||||||| Sbjct: 20751767 caggacggcattggagacctgggcttcatgggt 20751799
>dbj|AK099814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L01, full insert sequence Length = 1912 Score = 206 bits (104), Expect = 2e-49 Identities = 330/404 (81%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 645 acgtgttcgacggcagctgggtgcgggatgagaggtaccccctgtacaacagctccgagt 704 |||||||||||||| |||||||| || | ||||||| |||||||||||||| || Sbjct: 608 acgtgttcgacggcgcctgggtgcccgacgccgggtacccgctgtacaacagctcgctgt 667 Query: 705 gcccgtttgcggagagggggttcaactgcctcgccaatggcaggaggagcaccgagtacc 764 ||||||| |||||| | |||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 668 gcccgttcgcggagcgcgggttcaactgcctggccaacgggcggagggacaccgggtacc 727 Query: 765 tcaagtggcggtggaagccgcggcgatgcgacatgccgcgcttcagtgcccggagcgtgc 824 ||||||||||||||||||||||||| |||||| |||| | |||| ||||| || || Sbjct: 728 tcaagtggcggtggaagccgcggcggtgcgacgcgccgaggttcaccgcccgcgccgcgc 787 Query: 825 tggagtggctcagagggaagagggttgtgtttgtgggggattcgatgagccgaacacagt 884 ||||| |||| | |||||| |||| ||||| |||||||| || |||||||| || |||| Sbjct: 788 tggagcggctgcgcgggaagcgggtcgtgttcgtgggggactccatgagccgcacgcagt 847 Query: 885 gggagtccttcatctgcatgctcatgacaggggtggacgatcccaacaaggtttatgagg 944 |||||||||||||||||||||||||| | || |||||||| ||||| | ||| || |||| Sbjct: 848 gggagtccttcatctgcatgctcatggccggcgtggacgaccccaagacggtgta-gagg 906 Query: 945 tgaatggcaaccagatctcgaagacgatccggtttttaggagtgagattcgagtcattca 1004 |||| || ||| ||||| | |||||||| |||| || | ||||| |||| ||| ||| Sbjct: 907 tgaacgggaacgagatcaccaagacgatacggtccttggcggtgaggttcgcgtcgttcg 966 Query: 1005 acctcagtgtggagttctttcggtcggttttccttgtacagcag 1048 |||||| ||||||||||| || ||||| ||||| || |||||| Sbjct: 967 acctcaccgtggagttcttccgctcggtgttcctcgtccagcag 1010 Score = 184 bits (93), Expect = 8e-43 Identities = 429/541 (79%) Strand = Plus / Plus Query: 1110 tggatgatattagcaggaaatgggcgaatgccgacgtgcttattttcaattcagggcatt 1169 ||||| |||| ||||||||||||| |||| | || ||| | ||||||| | || || | Sbjct: 1069 tggataatatcagcaggaaatgggtgaattcagatgtgttggttttcaacaccggccact 1128 Query: 1170 ggtggactcccagcaaattatttgacatgggttgttattttgaggctggaggcttgctta 1229 |||||||||| | |||||| ||||| ||||||||||||||| || ||||| | |||||| Sbjct: 1129 ggtggactccgaccaaattgtttgagatgggttgttattttcagtctggacgagtgctta 1188 Query: 1230 aacttggaacgtcagttaattctgctttcaaaatggcactggaaacatgggcttcatggg 1289 |||| ||||| || || | ||||||||| | |||| |||| || ||||||||||||| Sbjct: 1189 aactaggaacatctgtcgaggctgctttcaggacggcattggagacctgggcttcatggg 1248 Query: 1290 tcaaggaaaaagtggatttaaaacgaacacgtgtcttcttccggacatatgaaccttctc 1349 | | ||| | | |||||||| |||| | ||| |||||||| |||||||| || || | Sbjct: 1249 ttgaaaaaagaatcgatttaaacagaactcatgttttcttccgaacatatgagccgtccc 1308 Query: 1350 attggagtggcttgaaccaaaaagtatgcgaagtaacagaaagacctacaactgaggcca 1409 | ||||||| || ||||| ||||| |||||||||||| ||| || | ||||||| Sbjct: 1309 actggagtgatacaaatcaaaaggtatgtgaagtaacagaacagccttcatcagaggcca 1368 Query: 1410 taggagctgacaggagtgaatttagggatatacttgctgatgttgttgcgaacatgagcg 1469 |||| ||| | |||||||||| || ||||||||| |||||||| || ||||||| | Sbjct: 1369 aaggaaatgataagagtgaatttgggactatacttgccgatgttgtggcaaacatgaaag 1428 Query: 1470 ttcctgtcactatactgaatgtgactttgatgggggccttcaggagtgatgcgcatattg 1529 |||||||||| |||| || |||||||| ||||| || ||| | |||||||| ||| ||| Sbjct: 1429 ctcctgtcactctactaaacgtgactttaatgggagcattccgaagtgatgctcatgttg 1488 Query: 1530 gtatttggagtcacccttctaccatacttgattgcagccattggtgtcttcccggagttc 1589 | | |||||| | ||| | || ||||||||||||||||||||||||| || ||||||| Sbjct: 1489 gcacctggagttatcctcccactgtacttgattgcagccattggtgtctccctggagttc 1548 Query: 1590 cagatgcttggaatgagctaatattttctcaccttttgacggatggttggcgaaagctgg 1649 | |||||||||||||| || ||||||| ||||||| || |||||||||||||| ||| Sbjct: 1549 ctgatgcttggaatgaactggtattttcataccttttaacaaatggttggcgaaagatgg 1608 Query: 1650 c 1650 | Sbjct: 1609 c 1609 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 526 cctggcctccgtcgcgctcgtgctctcctgcggcctatacctctatgtctcccggtacct 585 |||||||||||| ||||||||||| ||||||| || |||||||| || | ||||||||| Sbjct: 495 cctggcctccgtggcgctcgtgctgtcctgcgcgctctacctctacgtgttccggtacct 554 Query: 586 gggcc 590 |||| Sbjct: 555 cggcc 559
>dbj|AK100779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120F24, full insert sequence Length = 2574 Score = 127 bits (64), Expect = 2e-25 Identities = 211/260 (81%) Strand = Plus / Plus Query: 1367 caaaaagtatgcgaagtaacagaaagacctacaactgaggccataggagctgacaggagt 1426 ||||| ||||| |||||||||||| ||| || | ||||||| |||| ||| | |||| Sbjct: 1892 caaaaggtatgtgaagtaacagaacagccttcatcagaggccaaaggaaatgataagagt 1951 Query: 1427 gaatttagggatatacttgctgatgttgttgcgaacatgagcgttcctgtcactatactg 1486 |||||| || ||||||||| |||||||| || ||||||| | |||||||||| |||| Sbjct: 1952 gaatttgggactatacttgccgatgttgtggcaaacatgaaagctcctgtcactctacta 2011 Query: 1487 aatgtgactttgatgggggccttcaggagtgatgcgcatattggtatttggagtcaccct 1546 || |||||||| ||||| || ||| | |||||||| ||| |||| | |||||| | ||| Sbjct: 2012 aacgtgactttaatgggagcattccgaagtgatgctcatgttggcacctggagttatcct 2071 Query: 1547 tctaccatacttgattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 | || ||||||||||||||||||||||||| || |||||||| |||||||||||||| Sbjct: 2072 cccactgtacttgattgcagccattggtgtctccctggagttcctgatgcttggaatgaa 2131 Query: 1607 ctaatattttctcacctttt 1626 || ||||||| ||||||| Sbjct: 2132 ctggtattttcatacctttt 2151 Score = 42.1 bits (21), Expect = 7.6 Identities = 75/93 (80%) Strand = Plus / Plus Query: 1198 gggttgttattttgaggctggaggcttgcttaaacttggaacgtcagttaattctgcttt 1257 ||||||||||||| || ||||| | |||||||||| ||||| || || | ||||||| Sbjct: 695 gggttgttattttcagtctggacgagtgcttaaactaggaacatctgtcgaggctgcttt 754 Query: 1258 caaaatggcactggaaacatgggcttcatgggt 1290 || | |||| |||| || |||||||||||||| Sbjct: 755 caggacggcattggagacctgggcttcatgggt 787
>emb|CT984257.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 871 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 878 acacagtgggagtccttcatctgcatgctcatgacaggggtgga 921 |||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 824 acacagtgggagtctttcatatgcatgctcatgacgggagtgga 781 Score = 42.1 bits (21), Expect = 7.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1154 ttcaattcagggcattggtggactcccagcaaattatttgacatgggttgttatttt 1210 ||||| ||||||||||||||||| || | || | ||||| ||||||||||||||| Sbjct: 551 ttcaactcagggcattggtggacacctacaaagctctttgagatgggttgttatttt 495
>emb|CT980899.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 872 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 878 acacagtgggagtccttcatctgcatgctcatgacaggggtgga 921 |||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 824 acacagtgggagtctttcatatgcatgctcatgacgggagtgga 781 Score = 42.1 bits (21), Expect = 7.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1154 ttcaattcagggcattggtggactcccagcaaattatttgacatgggttgttatttt 1210 ||||| ||||||||||||||||| || | || | ||||| ||||||||||||||| Sbjct: 551 ttcaactcagggcattggtggacacctacaaagctctttgagatgggttgttatttt 495
>ref|NM_121921.1| Arabidopsis thaliana unknown protein (AT5G19160) mRNA, complete cds Length = 1395 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||||||||| || |||||||| ||| | ||||||||||| Sbjct: 1270 tgcagccattggtgtctccctggagttcctgattcgtggaatgagct 1316
>gb|DQ132729.1| Arabidopsis thaliana clone 01330 expressed protein (At5g19160) mRNA, complete cds Length = 1836 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||||||||| || |||||||| ||| | ||||||||||| Sbjct: 1509 tgcagccattggtgtctccctggagttcctgattcgtggaatgagct 1555
>gb|DQ132728.1| Arabidopsis thaliana clone 01329 expressed protein (At5g19160) mRNA, complete cds Length = 1852 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||||||||| || |||||||| ||| | ||||||||||| Sbjct: 1509 tgcagccattggtgtctccctggagttcctgattcgtggaatgagct 1555
>gb|AC069326.1|AC069326 Genomic Sequence For Arabidopsis thaliana Clone T24G5 From Chromosome V, complete sequence Length = 86358 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||||||||| || |||||||| ||| | ||||||||||| Sbjct: 23928 tgcagccattggtgtctccctggagttcctgattcgtggaatgagct 23974
>gb|AY924838.1| Arabidopsis thaliana hypothetical protein (At5g19160) mRNA, complete cds Length = 1395 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||||||||| || |||||||| ||| | ||||||||||| Sbjct: 1270 tgcagccattggtgtctccctggagttcctgattcgtggaatgagct 1316
>ref|NM_103782.2| Arabidopsis thaliana unknown protein (AT1G48880) mRNA, complete cds Length = 1613 Score = 52.0 bits (26), Expect = 0.008 Identities = 71/86 (82%) Strand = Plus / Plus Query: 836 agagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagtccttc 895 |||||||| ||| | || |||||||| ||||||||||| | || ||||||||||| || Sbjct: 538 agagggaaaaggatagtttttgtgggagattcgatgagtaggacgcagtgggagtctttg 597 Query: 896 atctgcatgctcatgacaggggtgga 921 || |||||| | ||||||||| |||| Sbjct: 598 atatgcatgttgatgacagggttgga 623
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||| ||||| ||||| ||||| |||||| | ||||||||||| Sbjct: 57508 gattgcagccactggtgccttcctggagtgccagatacatggaatgagct 57459
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.008 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 ||||||||||| ||||| ||||| ||||| |||||| | ||||||||||| Sbjct: 10921622 gattgcagccactggtgccttcctggagtgccagatacatggaatgagct 10921671
>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete sequence Length = 54313 Score = 52.0 bits (26), Expect = 0.008 Identities = 71/86 (82%) Strand = Plus / Minus Query: 836 agagggaagagggttgtgtttgtgggggattcgatgagccgaacacagtgggagtccttc 895 |||||||| ||| | || |||||||| ||||||||||| | || ||||||||||| || Sbjct: 38445 agagggaaaaggatagtttttgtgggagattcgatgagtaggacgcagtgggagtctttg 38386 Query: 896 atctgcatgctcatgacaggggtgga 921 || |||||| | ||||||||| |||| Sbjct: 38385 atatgcatgttgatgacagggttgga 38360
>emb|CT025838.2| Medicago truncatula chromosome 5 clone mth2-124f10, COMPLETE SEQUENCE Length = 113309 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1558 tgattgcagccattggtgtcttcccggagttccagatgcttggaat 1603 ||||||||||||||||||||| || || ||||| ||| |||||||| Sbjct: 17285 tgattgcagccattggtgtctgcctggtgttcctgatacttggaat 17240
>gb|AC171533.3| Medicago truncatula chromosome 7 BAC clone mth2-82b20, complete sequence Length = 94376 Score = 48.1 bits (24), Expect = 0.12 Identities = 42/48 (87%) Strand = Plus / Minus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaatgag 1606 ||||| || |||||||||||||| || |||||||||| ||||||||| Sbjct: 84807 gattgtagtcattggtgtcttccaggggttccagatgtatggaatgag 84760
>dbj|AK229444.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-77-N09 Length = 2163 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1817 tgcagccattggtgcctccccggggttccagactcttggaatga 1860
>dbj|AK229044.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-34-A08 Length = 1740 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 1396 gattgcagccattggtgtctccctggtgttcctgatacttggaa 1439
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 586 gggccagggccagggccgcgcggt 609 |||||||||||||||||||||||| Sbjct: 309550 gggccagggccagggccgcgcggt 309527
>ref|NM_116104.2| Arabidopsis thaliana unknown protein (AT3G62390) mRNA, complete cds Length = 1731 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 1396 gattgcagccattggtgtctccctggtgttcctgatacttggaa 1439
>ref|NM_120753.3| Arabidopsis thaliana unknown protein (AT5G06700) mRNA, complete cds Length = 2207 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1871 tgcagccattggtgcctccccggggttccagactcttggaatga 1914
>gb|AY085444.1| Arabidopsis thaliana clone 151835 mRNA, complete sequence Length = 1183 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 885 tgcagccattggtgcctccccggggttccagactcttggaatga 928
>gb|AY085065.1| Arabidopsis thaliana clone 126100 mRNA, complete sequence Length = 1569 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 1386 gattgcagccattggtgtctccctggtgttcctgatacttggaa 1429
>dbj|AP002032.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPH15 Length = 71277 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 15956 tgcagccattggtgcctccccggggttccagactcttggaatga 15999
>emb|BX823768.1|CNS0A6K8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS73ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1308 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 1217 gattgcagccattggtgtctccctggtgttcctgatacttggaa 1260
>emb|BX830143.1|CNS09YPY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2128 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1871 tgcagccattggtgcctccccggggttccagactcttggaatga 1914
>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14 Length = 77720 Score = 48.1 bits (24), Expect = 0.12 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||||||||| || || ||||| ||| ||||||| Sbjct: 30593 gattgcagccattggtgtctccctggtgttcctgatacttggaa 30550
>ref|NM_001056433.1| Oryza sativa (japonica cultivar-group) Os03g0307700 (Os03g0307700) mRNA, complete cds Length = 1740 Score = 46.1 bits (23), Expect = 0.49 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagttccagatgcttggaatga 1605 ||||||||||| ||||| ||||| ||||| |||||| | |||||||| Sbjct: 1694 gattgcagccactggtgccttcctggagtgccagatacatggaatga 1740
>ref|NM_001050276.1| Oryza sativa (japonica cultivar-group) Os01g0653100 (Os01g0653100) mRNA, complete cds Length = 1182 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Plus Query: 758 gagtacctcaagtggcggtggaagccg 784 |||| |||||||||||||||||||||| Sbjct: 274 gagttcctcaagtggcggtggaagccg 300
>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence Length = 106771 Score = 46.1 bits (23), Expect = 0.49 Identities = 44/51 (86%) Strand = Plus / Minus Query: 1558 tgattgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 |||||| ||||| ||||||||||| ||| |||| ||| |||||||| |||| Sbjct: 25139 tgattgtagccactggtgtcttcctggacttcctgatacttggaatcagct 25089
>gb|AC144893.15| Medicago truncatula clone mth2-29d23, complete sequence Length = 114354 Score = 46.1 bits (23), Expect = 0.49 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1558 tgattgcagccattggtgtcttcccggagttccagatgcttggaatgagct 1608 |||||| ||||| ||||||||||| ||| |||| ||| |||||||| |||| Sbjct: 15196 tgattgtagccactggtgtcttcctggacttcctgatacttggaatcagct 15246
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 758 gagtacctcaagtggcggtggaagccg 784 |||| |||||||||||||||||||||| Sbjct: 17786 gagttcctcaagtggcggtggaagccg 17760
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 46.1 bits (23), Expect = 0.49 Identities = 26/27 (96%) Strand = Plus / Minus Query: 758 gagtacctcaagtggcggtggaagccg 784 |||| |||||||||||||||||||||| Sbjct: 83032 gagttcctcaagtggcggtggaagccg 83006
>gb|CP000411.1| Oenococcus oeni PSU-1, complete genome Length = 1780517 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1945 aatgcaattttggaaattcatc 1966 |||||||||||||||||||||| Sbjct: 533863 aatgcaattttggaaattcatc 533884
>emb|CT967319.2| M.truncatula DNA sequence from clone MTH2-59J17 on chromosome 3, complete sequence Length = 92243 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 842 aagagggttgtgtttgtgggggattc 867 |||||| ||||||||||||||||||| Sbjct: 47587 aagaggcttgtgtttgtgggggattc 47612
>ref|XM_001053974.1| PREDICTED: Rattus norvegicus E2F transcription factor 5 (E2f5), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 593 ggccagggccgcgcggtggccg 614 |||||||||||||||||||||| Sbjct: 259 ggccagggccgcgcggtggccg 238
>ref|NM_203010.1| Arabidopsis thaliana unknown protein (AT5G06230) mRNA, complete cds Length = 1240 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 672 ttcaattcagggcattggtgga 693
>ref|NM_120705.2| Arabidopsis thaliana unknown protein (AT5G06230) mRNA, complete cds Length = 1656 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 762 ttcaattcagggcattggtgga 783
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 584 ctgggccagggccagggccgcg 605 |||||||||||||||||||||| Sbjct: 2388906 ctgggccagggccagggccgcg 2388885
>gb|AY133558.1| Arabidopsis thaliana At5g06230/MBL20_11 mRNA, complete cds Length = 1119 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 589 ttcaattcagggcattggtgga 610
>gb|AC097366.6| Genomic sequence for Mus musculus, clone RP23-81M23, from chromosome 17, complete sequence Length = 183518 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1899 acatacaaaacatcacagtttgtaac 1924 ||||||||| |||||||||||||||| Sbjct: 148667 acatacaaaccatcacagtttgtaac 148692
>gb|AF361591.1| Arabidopsis thaliana AT5g06230/MBL20_11 mRNA, complete cds Length = 1532 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 672 ttcaattcagggcattggtgga 693
>dbj|AP002544.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBL20 Length = 35301 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 29878 ttcaattcagggcattggtgga 29857
>emb|BX831679.1|CNS0A0WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1657 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1154 ttcaattcagggcattggtgga 1175 |||||||||||||||||||||| Sbjct: 763 ttcaattcagggcattggtgga 784
>gb|AC140350.3| Mus musculus BAC clone RP24-251F16 from 3, complete sequence Length = 162787 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 593 ggccagggccgcgcggtggccg 614 |||||||||||||||||||||| Sbjct: 52338 ggccagggccgcgcggtggccg 52359
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 767 aagtggcggtggaagccgcgg 787 ||||||||||||||||||||| Sbjct: 5307656 aagtggcggtggaagccgcgg 5307636
>ref|NM_001049656.1| Oryza sativa (japonica cultivar-group) Os01g0495200 (Os01g0495200) mRNA, complete cds Length = 720 Score = 42.1 bits (21), Expect = 7.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1139 gccgacgtgcttattttcaattcagggcattggtgga 1175 ||||||||||| | |||||| ||||||||||||||| Sbjct: 658 gccgacgtgctcgtgttcaatacagggcattggtgga 694
>gb|AC187044.2| Medicago truncatula clone mth2-135j6, complete sequence Length = 99871 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagt 1587 |||||||||||||||||||| || ||||| Sbjct: 84216 gattgcagccattggtgtctacctggagt 84244
>gb|AC174308.7| Medicago truncatula clone mth2-139i23, complete sequence Length = 114303 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1559 gattgcagccattggtgtcttcccggagt 1587 |||||||||||||||||||| || ||||| Sbjct: 77065 gattgcagccattggtgtctacctggagt 77093
>ref|XM_001073453.1| PREDICTED: Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (Smarca4), mRNA Length = 5620 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 acctgggccagggccagggcc 602 ||||||||||||||||||||| Sbjct: 995 acctgggccagggccagggcc 975
>ref|XM_343358.3| PREDICTED: Rattus norvegicus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (Smarca4), mRNA Length = 5620 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 acctgggccagggccagggcc 602 ||||||||||||||||||||| Sbjct: 995 acctgggccagggccagggcc 975
>emb|CT987399.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 797 Score = 42.1 bits (21), Expect = 7.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1154 ttcaattcagggcattggtggactcccagcaaattatttgacatgggttgttatttt 1210 ||||| ||||||||||||||||| || | || | ||||| ||||||||||||||| Sbjct: 551 ttcaactcagggcattggtggacacctacaaagctctttgagatgggttgttatttt 495
>emb|CT980830.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 837 Score = 42.1 bits (21), Expect = 7.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1154 ttcaattcagggcattggtggactcccagcaaattatttgacatgggttgttatttt 1210 ||||| ||||||||||||||||| || | || | ||||| ||||||||||||||| Sbjct: 551 ttcaactcagggcattggtggacacctacaaagctctttgagatgggttgttatttt 495
>ref|NM_106518.1| Arabidopsis thaliana unknown protein (AT1G78710) mRNA, complete cds Length = 1080 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||| || || ||||| ||||| |||||||| Sbjct: 1006 tgcagccattggtgcctccctggagtcccagacgcttggaa 1046
>gb|AE009249.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 19 of 187 of the complete sequence Length = 10051 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 949 tggcaaccagatctcgaagacgatc 973 ||||||||||||| ||||||||||| Sbjct: 3306 tggcaaccagatcccgaagacgatc 3282
>gb|AE008364.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 168 of 187 of the complete sequence Length = 10029 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 949 tggcaaccagatctcgaagacgatc 973 ||||||||||||| ||||||||||| Sbjct: 6756 tggcaaccagatcccgaagacgatc 6780
>gb|AC120181.10| Mus musculus chromosome 12, clone RP24-500I11, complete sequence Length = 212015 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 acctgggccagggccagggcc 602 ||||||||||||||||||||| Sbjct: 44271 acctgggccagggccagggcc 44291
>gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome 19, complete sequence Length = 173022 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1046 cagacccctgcccctcctgtc 1066 ||||||||||||||||||||| Sbjct: 107543 cagacccctgcccctcctgtc 107563
>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence Length = 133815 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 124069 agctcctgggttggggcaggc 124049
>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence Length = 228363 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1046 cagacccctgcccctcctgtc 1066 ||||||||||||||||||||| Sbjct: 124504 cagacccctgcccctcctgtc 124484
>gb|AC125451.7| Mus musculus chromosome 12, clone RP23-41O6, complete sequence Length = 236838 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 acctgggccagggccagggcc 602 ||||||||||||||||||||| Sbjct: 191708 acctgggccagggccagggcc 191728
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tcgacggcagctgggtgcggg 671 ||||||||||||||||||||| Sbjct: 1249383 tcgacggcagctgggtgcggg 1249403
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cgtctccttcctcggctcctc 25 ||||||||||||||||||||| Sbjct: 979893 cgtctccttcctcggctcctc 979873
>gb|AE005685.1| Caulobacter crescentus CB15 section 11 of 359 of the complete genome Length = 10290 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 gccagggccagggccgcgcgg 608 ||||||||||||||||||||| Sbjct: 7763 gccagggccagggccgcgcgg 7783
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 651 tcgacggcagctgggtgcggg 671 ||||||||||||||||||||| Sbjct: 3583248 tcgacggcagctgggtgcggg 3583228
>ref|XM_742734.1| Aspergillus fumigatus Af293 chitin biosynthesis protein (Afu6g02510) partial mRNA Length = 1374 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1047 agacccctgcccctcctgtcc 1067 ||||||||||||||||||||| Sbjct: 284 agacccctgcccctcctgtcc 304
>emb|AL954360.3| Human DNA sequence from clone RP11-98I6 on chromosome 10 Contains a novel protein similar to KIAA0592, solute carrier family 9 member 3 (SLC9A3) pseudogene and novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), complete sequence Length = 163231 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1947 tgcaattttggaaattcatct 1967 ||||||||||||||||||||| Sbjct: 96787 tgcaattttggaaattcatct 96767
>emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chromosome 10 Contains the 3' end of the gene for apobec-1 complementation factor (ACF) (ASP), the gene for a novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), the cathepsin L-like 2 (CTSLL2) pseudogene, three novel pseudogenes (KIAA1553), a novel gene, a protein geranylgeranyltransferase type I beta subunit (PGGT1B) pseudogene and a CpG island, complete sequence Length = 178899 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1947 tgcaattttggaaattcatct 1967 ||||||||||||||||||||| Sbjct: 127204 tgcaattttggaaattcatct 127224
>emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chromosome 10 Contains part of gene FLJ10824, a solute carrier family 9 (sodium/hydrogen exchanger) isoform 5 (SLC9A5) pseudogene, the ASAH2 gene for N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 and a dynein cytoplasmic intermediate polypeptide 2 (DNCI2) pseudogene, complete sequence Length = 162228 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1947 tgcaattttggaaattcatct 1967 ||||||||||||||||||||| Sbjct: 50072 tgcaattttggaaattcatct 50052
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 cccgggtctcgtcgtccgcgc 470 ||||||||||||||||||||| Sbjct: 7294790 cccgggtctcgtcgtccgcgc 7294770
>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene Length = 404123 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 130701 agctcctgggttggggcaggc 130721
>gb|AC000377.2| Homo sapiens chromosome 11 clone BAC 70i6, complete sequence Length = 111293 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 83664 agctcctgggttggggcaggc 83684
>gb|DQ020486.1| Sus scrofa clone BAC KNP_290F2, complete sequence Length = 123277 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 gggccagggccagggccgcgc 606 ||||||||||||||||||||| Sbjct: 54421 gggccagggccagggccgcgc 54441
>dbj|AP006236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0029L04 Length = 117192 Score = 42.1 bits (21), Expect = 7.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1139 gccgacgtgcttattttcaattcagggcattggtgga 1175 ||||||||||| | |||||| ||||||||||||||| Sbjct: 25193 gccgacgtgctcgtgttcaatacagggcattggtgga 25229
>dbj|AK071067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081G06, full insert sequence Length = 1622 Score = 42.1 bits (21), Expect = 7.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1139 gccgacgtgcttattttcaattcagggcattggtgga 1175 ||||||||||| | |||||| ||||||||||||||| Sbjct: 735 gccgacgtgctcgtgttcaatacagggcattggtgga 771
>dbj|AP006463.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-847E17, complete sequence Length = 165857 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 126057 agctcctgggttggggcaggc 126077
>emb|AJ504723.1|RNO504723 Rattus norvegicus partial mRNA for brahma-related protein 1 (brg-1 gene) Length = 4842 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 acctgggccagggccagggcc 602 ||||||||||||||||||||| Sbjct: 723 acctgggccagggccagggcc 703
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tcgacggcagctgggtgcggg 671 ||||||||||||||||||||| Sbjct: 1273147 tcgacggcagctgggtgcggg 1273167
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1562 tgcagccattggtgtcttcccggagttccagatgcttggaa 1602 |||||||||||||| || || ||||| ||||| |||||||| Sbjct: 73406 tgcagccattggtgcctccctggagtcccagacgcttggaa 73366
>emb|AL772199.11| Mouse DNA sequence from clone RP23-86J22 on chromosome 4, complete sequence Length = 228292 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1609 aatattttctcaccttttgac 1629 ||||||||||||||||||||| Sbjct: 36439 aatattttctcaccttttgac 36459
>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence Length = 132960 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 123218 agctcctgggttggggcaggc 123198
>emb|AL353939.1|HSM802644 Homo sapiens mRNA; cDNA DKFZp761H0610 (from clone DKFZp761H0610) Length = 6394 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 agctcctgggttggggcaggc 276 ||||||||||||||||||||| Sbjct: 160 agctcctgggttggggcaggc 140 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 327,146,274 Number of extensions: 16429622 Number of successful extensions: 93147 Number of sequences better than 10.0: 89 Number of HSP's gapped: 93110 Number of HSP's successfully gapped: 129 Length of query: 1989 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1966 Effective length of database: 18,503,978,556 Effective search space: 36378821841096 Effective search space used: 36378821841096 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)