ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76k15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L19, full insert sequence Length = 3032 Score = 648 bits (327), Expect = 0.0 Identities = 557/634 (87%), Gaps = 11/634 (1%) Strand = Plus / Plus Query: 226 cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 279 |||||||||||||||||||| ||||||| || |||||||||||||| |||||||| Sbjct: 95 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 154 Query: 280 ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 339 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 155 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 214 Query: 340 aagtccatcaagggctttatcatgaatttctcaaacagagcacctgatccagagagagat 399 ||||||||||||||||||||| | | ||||| |||||||| ||||| || || ||| Sbjct: 215 aagtccatcaagggctttatcgtaacgttctcgaacagagctcctgaccctgaacatgat 274 Query: 400 agtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacactcct 459 ||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 275 agtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacaccccc 334 Query: 460 tgggctggcagttctgaagaagaactagagagtgccggtgagggcctcgagaagtatgtt 519 |||||||| |||||||||||||||||||| |||||||| |||| ||||| || ||| Sbjct: 335 tgggctggaagttctgaagaagaactagaaagtgccgg-----gccttgagaaatacgtt 389 Query: 520 atgacaaagctgtataatcgggtatttgcttcggtcccggaagatgtgaagagtgacgaa 579 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 390 atgacaaagctgttcaatcgggtatttgcttctgtcccggaagatgtgaagagtgatgaa 449 Query: 580 gagctttttgagaagatttctctactacagcagtttatacgtcctgaaaacttagatata 639 || |||||||||||||| ||| | |||||||||||||||| ||||||||||| ||||| Sbjct: 450 gaactttttgagaagatgtctttgttacagcagtttatacggcctgaaaacttggatatc 509 Query: 640 aaaccagaatatcagaatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagata 699 |||||||||||||| | ||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 510 aaaccagaatatcaaagtgaaacatcatggctgcttgcacagaaggagctgcagaagata 569 Query: 700 aacatgtataaggctccaagggataagcttgcttgcattctgaactgttgtaaagtcatc 759 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 570 aacatgtataaggctccaagggataagcttgcttgcatcctgaactgctgtaaagtcatc 629 Query: 760 aataacttacttatgaatgcttctcatatgtcacatgataacccccctggagctgacgaa 819 || ||| ||||| | ||||| ||| | | ||| |||| || ||||| |||||||| ||| Sbjct: 630 aacaacctacttctaaatgcgtctattgtatcaaatgaaaatcccccgggagctgatgaa 689 Query: 820 tttcttccagtcctcatctatgtcaccataaagg 853 || |||||||||||||||||||| |||||||||| Sbjct: 690 ttccttccagtcctcatctatgttaccataaagg 723 Score = 377 bits (190), Expect = e-100 Identities = 543/663 (81%) Strand = Plus / Plus Query: 851 aggctaatcctccacagttacactcaaatcttttatacatacaaagatacaggtgtcaat 910 |||| |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||| Sbjct: 1645 aggcaaatcctccacagttacactcaaatctattatatatacagcgatacagacgtcaat 1704 Query: 911 cacgactggtgtcagaggcccaatannnnnnnacaaacatcctatctgcggagtcttttg 970 |||| |||||||||| || || || ||||||||| |||| || |||||||| Sbjct: 1705 cacggttggtgtcagaagctcagtatttctttacaaacatcttatccgctgagtctttca 1764 Query: 971 tttggaacattgaggcggagtctttatccatggatgaacgagatttccaaaagaagatgg 1030 | ||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 1765 tctggaacattgatggggaatcattatcaatggatgaacgagatttccaaaagaagatgg 1824 Query: 1031 atttggcaagggaacgcttgttaggattatcagttggctcagataaccaggagaatcaga 1090 | ||||||||||||||| |||| |||||||||| | ||||||| || ||||| || || | Sbjct: 1825 acttggcaagggaacgcatgttgggattatcagctagctcagagaatcaggacaaccaaa 1884 Query: 1091 ccaatcttgatgtgggggagcatggatcacaaacgctaaaggctagtggaaattccgatg 1150 |||||||||||| ||||||| ||||||||| || || ||||| | |||| |||| Sbjct: 1885 acaatcttgatgtacgggagcaaaaatcacaaacactgaaagctagcagggattctgatg 1944 Query: 1151 ccaacctacctttgaaagatcatgtccaaggtccagttcaggacatgaaaagggcaagtg 1210 ||| || ||||||||||| || |||||||||| | | ||| |||| ||||| |||| Sbjct: 1945 tcaatctctctttgaaagataatttccaaggtcctggactggaaatgagaagggacagtg 2004 Query: 1211 atgtgagtagtaaatcagttgagcgggtgcaatctatatctgatttagagaagaagggag 1270 ||| |||||||| |||||||||| |||||||| || |||||||| |||||||| |||| Sbjct: 2005 atgcaagtagtaacccagttgagcgtgtgcaatcgatttctgatttggagaagaaaggag 2064 Query: 1271 ctacagagcttgtcaaggatgacgacttgagcaaaatattccaggaatacccatttctgt 1330 | | |||||| |||||||||| ||||||| ||||| | | || || |||||||| || | Sbjct: 2065 cagccgagcttctcaaggatgatgacttgaacaaaaaaattcaagagtacccattccttt 2124 Query: 1331 ttgcccgtgctggtgatctgacagttgctgatgtagatacccttttaaactcttacaagc 1390 ||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||||||| Sbjct: 2125 ttgcccgctctggtgatctgactgttgctgatgtagaaaaccttttaaactcctacaagc 2184 Query: 1391 aactagtacttaagtatgtagcactctccaaggggatgggtgtcacccctgaaactcctc 1450 | |||||||| ||||||||||| || || | ||||||||| ||| || ||||| |||| Sbjct: 2185 agctagtactaaagtatgtagcgctttcgcaagggatgggtatcaaccttgaaaaccctc 2244 Query: 1451 ttgttcagaacatgcaaactgcatccgatcttcagatatccgaggagcctgagaatgtga 1510 |||||||| ||||||||||| || |||||| | ||| ||||||||| | ||||||| Sbjct: 2245 ctgttcagagcatgcaaactgtttctgatcttgtggaatctgaggagcctaaaaatgtga 2304 Query: 1511 aga 1513 ||| Sbjct: 2305 aga 2307
>ref|NM_001056166.1| Oryza sativa (japonica cultivar-group) Os03g0262900 (Os03g0262900) mRNA, complete cds Length = 2065 Score = 646 bits (326), Expect = 0.0 Identities = 556/633 (87%), Gaps = 11/633 (1%) Strand = Plus / Plus Query: 226 cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 279 |||||||||||||||||||| ||||||| || |||||||||||||| |||||||| Sbjct: 94 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 153 Query: 280 ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 339 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 154 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 213 Query: 340 aagtccatcaagggctttatcatgaatttctcaaacagagcacctgatccagagagagat 399 ||||||||||||||||||||| | | ||||| |||||||| ||||| || || ||| Sbjct: 214 aagtccatcaagggctttatcgtaacgttctcgaacagagctcctgaccctgaacatgat 273 Query: 400 agtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacactcct 459 ||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 274 agtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacaccccc 333 Query: 460 tgggctggcagttctgaagaagaactagagagtgccggtgagggcctcgagaagtatgtt 519 |||||||| |||||||||||||||||||| |||||||| |||| ||||| || ||| Sbjct: 334 tgggctggaagttctgaagaagaactagaaagtgccgg-----gccttgagaaatacgtt 388 Query: 520 atgacaaagctgtataatcgggtatttgcttcggtcccggaagatgtgaagagtgacgaa 579 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 389 atgacaaagctgttcaatcgggtatttgcttctgtcccggaagatgtgaagagtgatgaa 448 Query: 580 gagctttttgagaagatttctctactacagcagtttatacgtcctgaaaacttagatata 639 || |||||||||||||| ||| | |||||||||||||||| ||||||||||| ||||| Sbjct: 449 gaactttttgagaagatgtctttgttacagcagtttatacggcctgaaaacttggatatc 508 Query: 640 aaaccagaatatcagaatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagata 699 |||||||||||||| | ||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 509 aaaccagaatatcaaagtgaaacatcatggctgcttgcacagaaggagctgcagaagata 568 Query: 700 aacatgtataaggctccaagggataagcttgcttgcattctgaactgttgtaaagtcatc 759 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 569 aacatgtataaggctccaagggataagcttgcttgcatcctgaactgctgtaaagtcatc 628 Query: 760 aataacttacttatgaatgcttctcatatgtcacatgataacccccctggagctgacgaa 819 || ||| ||||| | ||||| ||| | | ||| |||| || ||||| |||||||| ||| Sbjct: 629 aacaacctacttctaaatgcgtctattgtatcaaatgaaaatcccccgggagctgatgaa 688 Query: 820 tttcttccagtcctcatctatgtcaccataaag 852 || |||||||||||||||||||| ||||||||| Sbjct: 689 ttccttccagtcctcatctatgttaccataaag 721 Score = 331 bits (167), Expect = 6e-87 Identities = 470/571 (82%) Strand = Plus / Plus Query: 943 acaaacatcctatctgcggagtcttttgtttggaacattgaggcggagtctttatccatg 1002 ||||||||| |||| || |||||||| | ||||||||||| | ||| || ||||| ||| Sbjct: 770 acaaacatcttatccgctgagtctttcatctggaacattgatggggaatcattatcaatg 829 Query: 1003 gatgaacgagatttccaaaagaagatggatttggcaagggaacgcttgttaggattatca 1062 ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||| Sbjct: 830 gatgaacgagatttccaaaagaagatggacttggcaagggaacgcatgttgggattatca 889 Query: 1063 gttggctcagataaccaggagaatcagaccaatcttgatgtgggggagcatggatcacaa 1122 | | ||||||| || ||||| || || | |||||||||||| ||||||| ||||||| Sbjct: 890 gctagctcagagaatcaggacaaccaaaacaatcttgatgtacgggagcaaaaatcacaa 949 Query: 1123 acgctaaaggctagtggaaattccgatgccaacctacctttgaaagatcatgtccaaggt 1182 || || || ||||| | |||| |||| ||| || ||||||||||| || |||||||| Sbjct: 950 acactgaaagctagcagggattctgatgtcaatctctctttgaaagataatttccaaggt 1009 Query: 1183 ccagttcaggacatgaaaagggcaagtgatgtgagtagtaaatcagttgagcgggtgcaa 1242 || | | ||| |||| ||||| ||||||| |||||||| |||||||||| |||||| Sbjct: 1010 cctggactggaaatgagaagggacagtgatgcaagtagtaacccagttgagcgtgtgcaa 1069 Query: 1243 tctatatctgatttagagaagaagggagctacagagcttgtcaaggatgacgacttgagc 1302 || || |||||||| |||||||| ||||| | |||||| |||||||||| ||||||| | Sbjct: 1070 tcgatttctgatttggagaagaaaggagcagccgagcttctcaaggatgatgacttgaac 1129 Query: 1303 aaaatattccaggaatacccatttctgtttgcccgtgctggtgatctgacagttgctgat 1362 |||| | | || || |||||||| || |||||||| ||||||||||||| ||||||||| Sbjct: 1130 aaaaaaattcaagagtacccattcctttttgcccgctctggtgatctgactgttgctgat 1189 Query: 1363 gtagatacccttttaaactcttacaagcaactagtacttaagtatgtagcactctccaag 1422 ||||| | |||||||||||| |||||||| |||||||| ||||||||||| || || | Sbjct: 1190 gtagaaaaccttttaaactcctacaagcagctagtactaaagtatgtagcgctttcgcaa 1249 Query: 1423 gggatgggtgtcacccctgaaactcctcttgttcagaacatgcaaactgcatccgatctt 1482 ||||||||| ||| || ||||| |||| |||||||| ||||||||||| || |||||| Sbjct: 1250 gggatgggtatcaaccttgaaaaccctcctgttcagagcatgcaaactgtttctgatctt 1309 Query: 1483 cagatatccgaggagcctgagaatgtgaaga 1513 | ||| ||||||||| | |||||||||| Sbjct: 1310 gtggaatctgaggagcctaaaaatgtgaaga 1340
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 377 bits (190), Expect = e-100 Identities = 543/663 (81%) Strand = Plus / Plus Query: 851 aggctaatcctccacagttacactcaaatcttttatacatacaaagatacaggtgtcaat 910 |||| |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||| Sbjct: 8603881 aggcaaatcctccacagttacactcaaatctattatatatacagcgatacagacgtcaat 8603940 Query: 911 cacgactggtgtcagaggcccaatannnnnnnacaaacatcctatctgcggagtcttttg 970 |||| |||||||||| || || || ||||||||| |||| || |||||||| Sbjct: 8603941 cacggttggtgtcagaagctcagtatttctttacaaacatcttatccgctgagtctttca 8604000 Query: 971 tttggaacattgaggcggagtctttatccatggatgaacgagatttccaaaagaagatgg 1030 | ||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 8604001 tctggaacattgatggggaatcattatcaatggatgaacgagatttccaaaagaagatgg 8604060 Query: 1031 atttggcaagggaacgcttgttaggattatcagttggctcagataaccaggagaatcaga 1090 | ||||||||||||||| |||| |||||||||| | ||||||| || ||||| || || | Sbjct: 8604061 acttggcaagggaacgcatgttgggattatcagctagctcagagaatcaggacaaccaaa 8604120 Query: 1091 ccaatcttgatgtgggggagcatggatcacaaacgctaaaggctagtggaaattccgatg 1150 |||||||||||| ||||||| ||||||||| || || ||||| | |||| |||| Sbjct: 8604121 acaatcttgatgtacgggagcaaaaatcacaaacactgaaagctagcagggattctgatg 8604180 Query: 1151 ccaacctacctttgaaagatcatgtccaaggtccagttcaggacatgaaaagggcaagtg 1210 ||| || ||||||||||| || |||||||||| | | ||| |||| ||||| |||| Sbjct: 8604181 tcaatctctctttgaaagataatttccaaggtcctggactggaaatgagaagggacagtg 8604240 Query: 1211 atgtgagtagtaaatcagttgagcgggtgcaatctatatctgatttagagaagaagggag 1270 ||| |||||||| |||||||||| |||||||| || |||||||| |||||||| |||| Sbjct: 8604241 atgcaagtagtaacccagttgagcgtgtgcaatcgatttctgatttggagaagaaaggag 8604300 Query: 1271 ctacagagcttgtcaaggatgacgacttgagcaaaatattccaggaatacccatttctgt 1330 | | |||||| |||||||||| ||||||| ||||| | | || || |||||||| || | Sbjct: 8604301 cagccgagcttctcaaggatgatgacttgaacaaaaaaattcaagagtacccattccttt 8604360 Query: 1331 ttgcccgtgctggtgatctgacagttgctgatgtagatacccttttaaactcttacaagc 1390 ||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||||||| Sbjct: 8604361 ttgcccgctctggtgatctgactgttgctgatgtagaaaaccttttaaactcctacaagc 8604420 Query: 1391 aactagtacttaagtatgtagcactctccaaggggatgggtgtcacccctgaaactcctc 1450 | |||||||| ||||||||||| || || | ||||||||| ||| || ||||| |||| Sbjct: 8604421 agctagtactaaagtatgtagcgctttcgcaagggatgggtatcaaccttgaaaaccctc 8604480 Query: 1451 ttgttcagaacatgcaaactgcatccgatcttcagatatccgaggagcctgagaatgtga 1510 |||||||| ||||||||||| || |||||| | ||| ||||||||| | ||||||| Sbjct: 8604481 ctgttcagagcatgcaaactgtttctgatcttgtggaatctgaggagcctaaaaatgtga 8604540 Query: 1511 aga 1513 ||| Sbjct: 8604541 aga 8604543 Score = 208 bits (105), Expect = 6e-50 Identities = 156/173 (90%) Strand = Plus / Plus Query: 500 agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttcggtcccgg 559 ||||||| ||||| || |||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 8602224 agggccttgagaaatacgttatgacaaagctgttcaatcgggtatttgcttctgtcccgg 8602283 Query: 560 aagatgtgaagagtgacgaagagctttttgagaagatttctctactacagcagtttatac 619 |||||||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 8602284 aagatgtgaagagtgatgaagaactttttgagaagatgtctttgttacagcagtttatac 8602343 Query: 620 gtcctgaaaacttagatataaaaccagaatatcagaatgaaacatcatggctg 672 | ||||||||||| ||||| |||||||||||||| | |||||||||||||||| Sbjct: 8602344 ggcctgaaaacttggatatcaaaccagaatatcaaagtgaaacatcatggctg 8602396 Score = 194 bits (98), Expect = 9e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 672 gcttgcgcaaaaggagctgcaaaagataaacatgtataaggctccaagggataagcttgc 731 |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 8602778 gcttgcacagaaggagctgcagaagataaacatgtataaggctccaagggataagcttgc 8602837 Query: 732 ttgcattctgaactgttgtaaagtcatcaataacttacttatgaatgcttctcatatgtc 791 |||||| |||||||| |||||||||||||| ||| ||||| | ||||| ||| | | || Sbjct: 8602838 ttgcatcctgaactgctgtaaagtcatcaacaacctacttctaaatgcgtctattgtatc 8602897 Query: 792 acatgataacccccctggagctgacgaatttcttccagtcctcatctatgtcaccataaa 851 | |||| || ||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 8602898 aaatgaaaatcccccgggagctgatgaattccttccagtcctcatctatgttaccataaa 8602957 Query: 852 gg 853 || Sbjct: 8602958 gg 8602959 Score = 165 bits (83), Expect = 8e-37 Identities = 121/134 (90%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 226 cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 279 |||||||||||||||||||| ||||||| || |||||||||||||| |||||||| Sbjct: 8600063 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 8600122 Query: 280 ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 339 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 8600123 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 8600182 Query: 340 aagtccatcaaggg 353 |||||||||||||| Sbjct: 8600183 aagtccatcaaggg 8600196 Score = 139 bits (70), Expect = 5e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 397 gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 456 |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 8601137 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 8601196 Query: 457 ccttgggctggcagttctgaagaagaactagagagtgccggtgagg 502 || |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 8601197 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagg 8601242
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 377 bits (190), Expect = e-100 Identities = 543/663 (81%) Strand = Plus / Plus Query: 851 aggctaatcctccacagttacactcaaatcttttatacatacaaagatacaggtgtcaat 910 |||| |||||||||||||||||||||||||| ||||| ||||| ||||||| |||||| Sbjct: 87018 aggcaaatcctccacagttacactcaaatctattatatatacagcgatacagacgtcaat 87077 Query: 911 cacgactggtgtcagaggcccaatannnnnnnacaaacatcctatctgcggagtcttttg 970 |||| |||||||||| || || || ||||||||| |||| || |||||||| Sbjct: 87078 cacggttggtgtcagaagctcagtatttctttacaaacatcttatccgctgagtctttca 87137 Query: 971 tttggaacattgaggcggagtctttatccatggatgaacgagatttccaaaagaagatgg 1030 | ||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 87138 tctggaacattgatggggaatcattatcaatggatgaacgagatttccaaaagaagatgg 87197 Query: 1031 atttggcaagggaacgcttgttaggattatcagttggctcagataaccaggagaatcaga 1090 | ||||||||||||||| |||| |||||||||| | ||||||| || ||||| || || | Sbjct: 87198 acttggcaagggaacgcatgttgggattatcagctagctcagagaatcaggacaaccaaa 87257 Query: 1091 ccaatcttgatgtgggggagcatggatcacaaacgctaaaggctagtggaaattccgatg 1150 |||||||||||| ||||||| ||||||||| || || ||||| | |||| |||| Sbjct: 87258 acaatcttgatgtacgggagcaaaaatcacaaacactgaaagctagcagggattctgatg 87317 Query: 1151 ccaacctacctttgaaagatcatgtccaaggtccagttcaggacatgaaaagggcaagtg 1210 ||| || ||||||||||| || |||||||||| | | ||| |||| ||||| |||| Sbjct: 87318 tcaatctctctttgaaagataatttccaaggtcctggactggaaatgagaagggacagtg 87377 Query: 1211 atgtgagtagtaaatcagttgagcgggtgcaatctatatctgatttagagaagaagggag 1270 ||| |||||||| |||||||||| |||||||| || |||||||| |||||||| |||| Sbjct: 87378 atgcaagtagtaacccagttgagcgtgtgcaatcgatttctgatttggagaagaaaggag 87437 Query: 1271 ctacagagcttgtcaaggatgacgacttgagcaaaatattccaggaatacccatttctgt 1330 | | |||||| |||||||||| ||||||| ||||| | | || || |||||||| || | Sbjct: 87438 cagccgagcttctcaaggatgatgacttgaacaaaaaaattcaagagtacccattccttt 87497 Query: 1331 ttgcccgtgctggtgatctgacagttgctgatgtagatacccttttaaactcttacaagc 1390 ||||||| ||||||||||||| |||||||||||||| | |||||||||||| ||||||| Sbjct: 87498 ttgcccgctctggtgatctgactgttgctgatgtagaaaaccttttaaactcctacaagc 87557 Query: 1391 aactagtacttaagtatgtagcactctccaaggggatgggtgtcacccctgaaactcctc 1450 | |||||||| ||||||||||| || || | ||||||||| ||| || ||||| |||| Sbjct: 87558 agctagtactaaagtatgtagcgctttcgcaagggatgggtatcaaccttgaaaaccctc 87617 Query: 1451 ttgttcagaacatgcaaactgcatccgatcttcagatatccgaggagcctgagaatgtga 1510 |||||||| ||||||||||| || |||||| | ||| ||||||||| | ||||||| Sbjct: 87618 ctgttcagagcatgcaaactgtttctgatcttgtggaatctgaggagcctaaaaatgtga 87677 Query: 1511 aga 1513 ||| Sbjct: 87678 aga 87680 Score = 208 bits (105), Expect = 6e-50 Identities = 156/173 (90%) Strand = Plus / Plus Query: 500 agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttcggtcccgg 559 ||||||| ||||| || |||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 85361 agggccttgagaaatacgttatgacaaagctgttcaatcgggtatttgcttctgtcccgg 85420 Query: 560 aagatgtgaagagtgacgaagagctttttgagaagatttctctactacagcagtttatac 619 |||||||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 85421 aagatgtgaagagtgatgaagaactttttgagaagatgtctttgttacagcagtttatac 85480 Query: 620 gtcctgaaaacttagatataaaaccagaatatcagaatgaaacatcatggctg 672 | ||||||||||| ||||| |||||||||||||| | |||||||||||||||| Sbjct: 85481 ggcctgaaaacttggatatcaaaccagaatatcaaagtgaaacatcatggctg 85533 Score = 194 bits (98), Expect = 9e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 672 gcttgcgcaaaaggagctgcaaaagataaacatgtataaggctccaagggataagcttgc 731 |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 85915 gcttgcacagaaggagctgcagaagataaacatgtataaggctccaagggataagcttgc 85974 Query: 732 ttgcattctgaactgttgtaaagtcatcaataacttacttatgaatgcttctcatatgtc 791 |||||| |||||||| |||||||||||||| ||| ||||| | ||||| ||| | | || Sbjct: 85975 ttgcatcctgaactgctgtaaagtcatcaacaacctacttctaaatgcgtctattgtatc 86034 Query: 792 acatgataacccccctggagctgacgaatttcttccagtcctcatctatgtcaccataaa 851 | |||| || ||||| |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 86035 aaatgaaaatcccccgggagctgatgaattccttccagtcctcatctatgttaccataaa 86094 Query: 852 gg 853 || Sbjct: 86095 gg 86096 Score = 165 bits (83), Expect = 8e-37 Identities = 121/134 (90%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 226 cccgatccggcgacgatggagggcggcgccg------acgccttcgggtcctcgaccgcg 279 |||||||||||||||||||| ||||||| || |||||||||||||| |||||||| Sbjct: 83200 cccgatccggcgacgatggatggcggcggcggaggcgacgccttcgggtccgcgaccgcg 83259 Query: 280 ccgctggcctggcacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtc 339 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 83260 ccgctggcctggcacgacttcctggagcgcatgcgccagccctccgccgccgacttcgtc 83319 Query: 340 aagtccatcaaggg 353 |||||||||||||| Sbjct: 83320 aagtccatcaaggg 83333 Score = 139 bits (70), Expect = 5e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 397 gatagtgcagctgttcaagagttccttgaaaatatggaaggtgctttcagagcccacact 456 |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 84274 gatagtgcggctgttcaagaattcctggaaaatatggaaggtgctttcagggctcacacc 84333 Query: 457 ccttgggctggcagttctgaagaagaactagagagtgccggtgagg 502 || |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 84334 ccctgggctggaagttctgaagaagaactagaaagtgccggtgagg 84379
>gb|AY110141.1| Zea mays CL39723_1 mRNA sequence Length = 1080 Score = 147 bits (74), Expect = 2e-31 Identities = 170/204 (83%) Strand = Plus / Plus Query: 1212 tgtgagtagtaaatcagttgagcgggtgcaatctatatctgatttagagaagaagggagc 1271 ||||||| ||||| |||||||| |||||||||||| ||||||||||||||||| ||| | Sbjct: 321 tgtgagtggtaaacaagttgagcaggtgcaatctatttctgatttagagaagaaaggaac 380 Query: 1272 tacagagcttgtcaaggatgacgacttgagcaaaatattccaggaatacccatttctgtt 1331 | | || || |||| || || ||||||| | |||||||| ||||| |||||||| Sbjct: 381 tgcggaactcctcaatgaggatgacttgaacnnnnnnttccaggagtacccgtttctgtt 440 Query: 1332 tgcccgtgctggtgatctgacagttgctgatgtagatacccttttaaactcttacaagca 1391 ||||||||||||||||||||| ||||||||||||| | ||| || || || |||||||| Sbjct: 441 tgcccgtgctggtgatctgactattgctgatgtagagagcctattgaattcgtacaagca 500 Query: 1392 actagtacttaagtatgtagcact 1415 |||||||||| |||||||||||| Sbjct: 501 actagtacttcggtatgtagcact 524 Score = 44.1 bits (22), Expect = 2.0 Identities = 150/187 (80%) Strand = Plus / Plus Query: 917 tggtgtcagaggcccaatannnnnnnacaaacatcctatctgcggagtcttttgtttgga 976 ||||||||||||| ||||| |||||||||||||| | ||||| |||||||| | |||| Sbjct: 20 tggtgtcagaggctcaatacnnnnnnacaaacatattgtctgctgagtctttcatatgga 79 Query: 977 acattgaggcggagtctttatccatggatgaacgagatttccaaaagaagatggatttgg 1036 ||||||| | ||| || ||||| ||| ||||| |||||| |||| || |||| | | Sbjct: 80 acattgatggggaatcattatcgatgaatgaattagattttcaaaggagaatgggtggag 139 Query: 1037 caagggaacgcttgttaggattatcagttggctcagataaccaggagaatcagaccaatc 1096 ||||||||| | |||| || ||||||| || |||||| ||||||| ||||| |||||| Sbjct: 140 caagggaacacatgttggggttatcagctgactcagaggaccaggataatcaagccaatc 199 Query: 1097 ttgatgt 1103 |||||| Sbjct: 200 ctgatgt 206
>ref|NM_120968.1| Arabidopsis thaliana unknown protein (AT5G09320) mRNA, complete cds Length = 2473 Score = 85.7 bits (43), Expect = 6e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||||||| |||||||||| || ||||| ||||| ||||| |||||||| ||||| Sbjct: 535 cctggagctgaccaatttcttcctgttctcatatatgttaccattaaggctaaccctccc 594 Query: 865 cagttacactcaaatcttttatacatacaaagatacaggtgtcaatc 911 ||||| |||||||| | || || ||||||||||| ||| ||||||| Sbjct: 595 cagtttcactcaaacttgttgtatatacaaagatataggcgtcaatc 641 Score = 44.1 bits (22), Expect = 2.0 Identities = 127/162 (78%) Strand = Plus / Plus Query: 621 tcctgaaaacttagatataaaaccagaatatcagaatgaaacatcatggctgcttgcgca 680 |||||||||||| |||||| ||||| | ||| || ||||||| ||||| || || || Sbjct: 351 tcctgaaaacttggatatacaaccaacttttcaaaaccaaacatcttggcttctagctca 410 Query: 681 aaaggagctgcaaaagataaacatgtataaggctccaagggataagcttgcttgcattct 740 ||| ||||| || |||||||| ||||| || ||||| | ||||||||| || || || Sbjct: 411 aaaagagctccagaagataaatatgtacaatgctcctcgtgataagcttatgtgtatcct 470 Query: 741 gaactgttgtaaagtcatcaataacttacttatgaatgcttc 782 | || || |||||||| |||||||||||| | |||||||| Sbjct: 471 taggtgctgcaaagtcattaataacttacttctaaatgcttc 512
>ref|NM_112867.3| Arabidopsis thaliana unknown protein (AT3G19770) mRNA, complete cds Length = 2010 Score = 71.9 bits (36), Expect = 9e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 655 aatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagataaacatgtataaggct 714 |||||| | ||||||||||| || ||||| ||||| || |||||||||||||| || ||| Sbjct: 480 aatgaatcgtcatggctgctagctcaaaaagagctccagaagataaacatgtacaaagct 539 Query: 715 ccaagggataagcttgcttgcattctgaactgttgtaaagtcatcaataacttact 770 || | |||||||||| || || || |||||||| ||||| || ||||||||||| Sbjct: 540 cctcgtgataagcttgtgtgtatccttaactgttgcaaagtgattaataacttact 595 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 502 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 327 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 376 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||| |||||||||||||| || | || ||||| || ||||||||||| |||||| Sbjct: 630 cctggagcagacgaatttcttcctgttttgatatatgtaacaataaaggctaaccctcca 689 Query: 865 ca 866 || Sbjct: 690 ca 691
>gb|AY079338.1| Arabidopsis thaliana unknown protein (At3g19770) mRNA, complete cds Length = 1594 Score = 71.9 bits (36), Expect = 9e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 655 aatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagataaacatgtataaggct 714 |||||| | ||||||||||| || ||||| ||||| || |||||||||||||| || ||| Sbjct: 394 aatgaatcgtcatggctgctagctcaaaaagagctccagaagataaacatgtacaaagct 453 Query: 715 ccaagggataagcttgcttgcattctgaactgttgtaaagtcatcaataacttact 770 || | |||||||||| || || || |||||||| ||||| || ||||||||||| Sbjct: 454 cctcgtgataagcttgtgtgtatccttaactgttgcaaagtgattaataacttact 509 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 502 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 241 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 290 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||| |||||||||||||| || | || ||||| || ||||||||||| |||||| Sbjct: 544 cctggagcagacgaatttcttcctgttttgatatatgtaacaataaaggctaaccctcca 603 Query: 865 ca 866 || Sbjct: 604 ca 605
>gb|AY045810.1| Arabidopsis thaliana unknown protein (At3g19770) mRNA, complete cds Length = 2013 Score = 71.9 bits (36), Expect = 9e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 655 aatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagataaacatgtataaggct 714 |||||| | ||||||||||| || ||||| ||||| || |||||||||||||| || ||| Sbjct: 473 aatgaatcgtcatggctgctagctcaaaaagagctccagaagataaacatgtacaaagct 532 Query: 715 ccaagggataagcttgcttgcattctgaactgttgtaaagtcatcaataacttact 770 || | |||||||||| || || || |||||||| ||||| || ||||||||||| Sbjct: 533 cctcgtgataagcttgtgtgtatccttaactgttgcaaagtgattaataacttact 588 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 502 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 320 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 369 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||| |||||||||||||| || | || ||||| || ||||||||||| |||||| Sbjct: 623 cctggagcagacgaatttcttcctgttttgatatatgtaacaataaaggctaaccctcca 682 Query: 865 ca 866 || Sbjct: 683 ca 684
>gb|DQ099168.1| Arachis hypogaea clone Ah1TC3B04 microsatellite sequence Length = 288 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 292 cacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtcaagtccatcaag 351 ||||||||||||||||| |||||||| || ||||||||||| || ||||| |||||||| Sbjct: 81 cacgacttcctcgagcggatgcgccaaccctccgccgccgatttcgtcaaagccatcaag 140
>dbj|AB025631.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MPN9 Length = 81035 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 500 agggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 351 agggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 402 Score = 56.0 bits (28), Expect = 5e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 679 caaaaggagctgcaaaagataaacatgtataaggctccaagggataagcttgcttgcatt 738 ||||| ||||| || |||||||||||||| || ||||| | |||||||||| || || Sbjct: 620 caaaaagagctccagaagataaacatgtacaaagctcctcgtgataagcttgtgtgtatc 679 Query: 739 ctgaactgttgtaaagtcatcaataacttact 770 || |||||||| ||||| || ||||||||||| Sbjct: 680 cttaactgttgcaaagtgattaataacttact 711
>emb|BX823509.1|CNS0A4QU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZG02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1988 Score = 63.9 bits (32), Expect = 2e-06 Identities = 96/116 (82%), Gaps = 1/116 (0%) Strand = Plus / Plus Query: 655 aatgaaacatcatggctgcttgcgcaaaaggagctgcaaaagataaacatgtataaggct 714 |||||| | ||||||||||| || |||||| |||| || |||||||||||||| || ||| Sbjct: 458 aatgaatcgtcatggctgctagctcaaaag-agctccagaagataaacatgtacaaagct 516 Query: 715 ccaagggataagcttgcttgcattctgaactgttgtaaagtcatcaataacttact 770 || | |||||||||| || || || |||||||| ||||| || ||||||||||| Sbjct: 517 cctcgtgataagcttgtgtgtatccttaactgttgcaaagtgattaataacttact 572 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 502 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 305 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 354 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||| |||||||||||||| || | || ||||| || ||||||||||| |||||| Sbjct: 607 cctggagcagacgaatttcttcctgttttgatatatgtaacaataaaggctaaccctcca 666 Query: 865 ca 866 || Sbjct: 667 ca 668
>gb|DQ099140.1| Arachis hypogaea clone AH2TC7A02 microsatellite sequence Length = 401 Score = 61.9 bits (31), Expect = 9e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 292 cacgacttcctcgagcgcatgcgccagccttccgccgccgaatttgtcaag 342 ||||||||||||||||| |||||||| || ||||||||||| || |||||| Sbjct: 291 cacgacttcctcgagcggatgcgccaaccctccgccgccgatttcgtcaag 241
>ref|NM_001035651.1| Arabidopsis thaliana unknown protein (AT3G19770) mRNA, complete cds Length = 2010 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 502 ggcctcgagaagtatgttatgacaaagctgtataatcgggtatttgcttc 551 ||||| ||||||||||||||||||||||| | || |||||| |||||||| Sbjct: 327 ggcctggagaagtatgttatgacaaagctatttactcgggtgtttgcttc 376 Score = 56.0 bits (28), Expect = 5e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 679 caaaaggagctgcaaaagataaacatgtataaggctccaagggataagcttgcttgcatt 738 ||||| ||||| || |||||||||||||| || ||||| | |||||||||| || || Sbjct: 500 caaaaagagctccagaagataaacatgtacaaagctcctcgtgataagcttgtgtgtatc 559 Query: 739 ctgaactgttgtaaagtcatcaataacttact 770 || |||||||| ||||| || ||||||||||| Sbjct: 560 cttaactgttgcaaagtgattaataacttact 591 Score = 52.0 bits (26), Expect = 0.008 Identities = 53/62 (85%) Strand = Plus / Plus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaaggctaatcctcca 864 |||||||| |||||||||||||| || | || ||||| || ||||||||||| |||||| Sbjct: 626 cctggagcagacgaatttcttcctgttttgatatatgtaacaataaaggctaaccctcca 685 Query: 865 ca 866 || Sbjct: 686 ca 687
>gb|AC189313.1| Brassica rapa subsp. pekinensis clone KBrB034N10, complete sequence Length = 130281 Score = 50.1 bits (25), Expect = 0.033 Identities = 43/49 (87%) Strand = Plus / Minus Query: 851 aggctaatcctccacagttacactcaaatcttttatacatacaaagata 899 ||||||| ||||||||||| |||||||| | ||||| ||||||||||| Sbjct: 50316 aggctaaccctccacagtttcactcaaacttgttatatatacaaagata 50268
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project) Length = 103534 Score = 50.1 bits (25), Expect = 0.033 Identities = 43/49 (87%) Strand = Plus / Minus Query: 805 cctggagctgacgaatttcttccagtcctcatctatgtcaccataaagg 853 |||||||||||| |||||||||| || ||||| ||||| ||||| |||| Sbjct: 31820 cctggagctgaccaatttcttcctgttctcatatatgttaccattaagg 31772 Score = 42.1 bits (21), Expect = 8.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 851 aggctaatcctccacagttacactcaaatcttttatacatacaaagatacaggtgtcaat 910 ||||||| ||||| ||||| |||||||| | || || ||||||||||| ||| |||||| Sbjct: 31653 aggctaaccctccccagtttcactcaaacttgttgtatatacaaagatataggcgtcaat 31594 Query: 911 c 911 | Sbjct: 31593 c 31593 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 500 agggcctcgagaagtatgttatgacaaag 528 ||||||| ||||||||||| ||||||||| Sbjct: 32212 agggcctggagaagtatgtcatgacaaag 32184
>gb|AE006031.1| Caulobacter crescentus CB15 section 357 of 359 of the complete genome Length = 10388 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 247 ggcggcgccgacgccttcgggtcc 270 |||||||||||||||||||||||| Sbjct: 4401 ggcggcgccgacgccttcgggtcc 4424
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1309 ttccaggaatacccatttctgtttgccc 1336 |||||| ||||||||||||||||||||| Sbjct: 32306 ttccagtaatacccatttctgtttgccc 32279
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1646 agaaaacactgaaaaatgaatca 1668 ||||||||||||||||||||||| Sbjct: 159913 agaaaacactgaaaaatgaatca 159891
>gb|AC157017.3| Mus musculus 10 BAC RP24-559D16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170093 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1646 agaaaacactgaaaaatgaatca 1668 ||||||||||||||||||||||| Sbjct: 61792 agaaaacactgaaaaatgaatca 61770
>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence Length = 159578 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1585 gactcagaagaagtaggcaatg 1606 |||||||||||||||||||||| Sbjct: 124617 gactcagaagaagtaggcaatg 124596
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1585 gactcagaagaagtaggcaatg 1606 |||||||||||||||||||||| Sbjct: 31997 gactcagaagaagtaggcaatg 31976
>emb|BX000484.12| Zebrafish DNA sequence from clone CH211-12E1 in linkage group 2, complete sequence Length = 158932 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 aatatcagaatgaaacatcatg 668 |||||||||||||||||||||| Sbjct: 15759 aatatcagaatgaaacatcatg 15738
>gb|U33425.1|PMU33425 Plasmodium malariae cysteine proteinase gene, partial cds Length = 519 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1970 tttttgtaaactgttactacta 1991 |||||||||||||||||||||| Sbjct: 477 tttttgtaaactgttactacta 456
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2013 ggcaggtattattcgtgccaatattc 2038 |||||||||||| ||||||||||||| Sbjct: 103575 ggcaggtattatgcgtgccaatattc 103600
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 cgacttcctcgagcgcatgcgccagcctt 322 ||||||||||| |||||||| |||||||| Sbjct: 1378100 cgacttcctcgcgcgcatgctccagcctt 1378128
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 631 ttagatataaaaccagaatatcaga 655 ||||||||||||| ||||||||||| Sbjct: 6264445 ttagatataaaacaagaatatcaga 6264469
>emb|BX950218.13| Zebrafish DNA sequence from clone DKEY-276J7 in linkage group 6, complete sequence Length = 93848 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1884 atggcattttattctgctgaa 1904 ||||||||||||||||||||| Sbjct: 48417 atggcattttattctgctgaa 48397
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 tcctcgagcgcatgcgccagc 319 ||||||||||||||||||||| Sbjct: 890505 tcctcgagcgcatgcgccagc 890525
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 gacgatggagggcggcgccga 257 ||||||||||||||||||||| Sbjct: 2640282 gacgatggagggcggcgccga 2640262
>gb|AY292785.1| Romerolagus diazi PRKC1 gene, partial cds Length = 532 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1275 agagcttgtcaaggatgacga 1295 ||||||||||||||||||||| Sbjct: 54 agagcttgtcaaggatgacga 74
>gb|AC002044.1|HUAC002044 Human Chromosome 16 BAC clone CIT987SK-A-418G10, complete sequence Length = 218074 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cctttgacctcccccacccccatct 171 ||||||| ||||||||||||||||| Sbjct: 155267 cctttgatctcccccacccccatct 155243
>gb|AC116096.3| Homo sapiens chromosome 3 clone RP11-669C19, complete sequence Length = 164379 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1888 cattttattctgctgaagcta 1908 ||||||||||||||||||||| Sbjct: 160308 cattttattctgctgaagcta 160328
>gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, complete sequence Length = 153582 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1888 cattttattctgctgaagcta 1908 ||||||||||||||||||||| Sbjct: 131211 cattttattctgctgaagcta 131191
>gb|BC097561.1| Xenopus laevis hypothetical protein MGC114699, mRNA (cDNA clone MGC:114699 IMAGE:6631833), complete cds Length = 2420 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 ggaagatgtgaagagtgacgaagag 582 |||||||||||||||||| |||||| Sbjct: 438 ggaagatgtgaagagtgaggaagag 462
>emb|AJ243059.1|SPN243059 Streptococcus pneumoniae partial pbp2b, recR, ddl and partial murF genes, strain 29044 Length = 3557 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1628 tcgatccaagtcgtgaccaga 1648 ||||||||||||||||||||| Sbjct: 1668 tcgatccaagtcgtgaccaga 1688
>emb|BX470105.10| Zebrafish DNA sequence from clone CH211-252D21 in linkage group 8, complete sequence Length = 155300 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1884 atggcattttattctgctgaa 1904 ||||||||||||||||||||| Sbjct: 16048 atggcattttattctgctgaa 16028
>gb|AC132068.2| Homo sapiens chromosome 16 clone CTD-2326C4, complete sequence Length = 142641 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 cctttgacctcccccacccccatct 171 ||||||| ||||||||||||||||| Sbjct: 63384 cctttgatctcccccacccccatct 63360
>ref|XM_951297.1| Neurospora crassa OR74A hypothetical protein (NCU00080.1) partial mRNA Length = 1089 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1178 aaggtccagttcaggacatgaaaag 1202 |||||||||||||||| |||||||| Sbjct: 500 aaggtccagttcaggatatgaaaag 476
>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete sequence Length = 226471 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 686 agctgcaaaagataaacatgt 706 ||||||||||||||||||||| Sbjct: 212554 agctgcaaaagataaacatgt 212574 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 396,132,417 Number of extensions: 20935667 Number of successful extensions: 111682 Number of sequences better than 10.0: 40 Number of HSP's gapped: 111672 Number of HSP's successfully gapped: 72 Length of query: 2111 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2088 Effective length of database: 18,503,978,556 Effective search space: 38636307224928 Effective search space used: 38636307224928 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
