ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76j08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099579:Os12g0256300 | 38 | 0.11 | 2 | AK073908:Os12g0256300 | 38 | 0.11 | 3 | AK106335:Os01g0687600 | 36 | 0.42 | 4 | AK068046:Os01g0503500 | 35 | 0.55 | 5 | Os02g0724600:Os02g0724600 | 35 | 0.72 | 6 | AK060476:Os01g0773700 | 34 | 1.6 | 7 | AK060438:Os01g0773700 | 34 | 1.6 | 8 | Os12g0226300:Os12g0226300 | 33 | 2.1 | 9 | AK119859: | 33 | 2.7 | 10 | AK058639:Os08g0105700 | 32 | 4.7 | 11 | AK067972:Os06g0114600 | 32 | 4.7 | 12 | Os08g0447600:Os08g0447600 | 32 | 6.1 | 13 | AK110130: | 32 | 6.1 | 14 | AK121602:Os01g0869000 | 32 | 6.1 | 15 | AK071635:Os01g0155600 | 32 | 6.1 | 16 | AK067351:Os01g0869000 | 32 | 6.1 | 17 | AK066896:Os03g0270200 | 32 | 6.1 | 18 | AK060171:Os01g0155600 | 32 | 6.1 | 19 | Os03g0398400:Os03g0398400 | 32 | 8.0 | 20 | AK120650:Os06g0534800 | 32 | 8.0 | 21 | AK108739:Os06g0534800 | 32 | 8.0 |
|---|
>AK099579:Os12g0256300 | Length = 759 Score = 37.7 bits (86), Expect = 0.11 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -3 Query: 349 QAGDGTKEPTRPDPTDGVRETDLGSHGIRRGKRNRWNPPSIDRSDRYPRK-RAESPASTG 173 + GD + P+R D G RR +R R +R DR+ R+ R SP+S Sbjct: 112 EGGDRRRRPSRVSDDD--------KEGGRR-RRRRSTDSDDERGDRHRRRHRRRSPSSES 162 Query: 172 SKAGEERSKNQRRFETNRDEGRERKRKETVAETR 71 S G RS+ RR E++R + ER+R E R Sbjct: 163 SDGG--RSRRHRRDESSRRQRDERRRDRGGREER 194
>AK073908:Os12g0256300 | Length = 787 Score = 37.7 bits (86), Expect = 0.11 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = -3 Query: 349 QAGDGTKEPTRPDPTDGVRETDLGSHGIRRGKRNRWNPPSIDRSDRYPRK-RAESPASTG 173 + GD + P+R D G RR +R R +R DR+ R+ R SP+S Sbjct: 112 EGGDRRRRPSRVSDDD--------KEGGRR-RRRRSTDSDDERGDRHRRRHRRRSPSSES 162 Query: 172 SKAGEERSKNQRRFETNRDEGRERKRKETVAETR 71 S G RS+ RR E++R + ER+R E R Sbjct: 163 SDGG--RSRRHRRDESSRRQRDERRRDRGGREER 194
>AK106335:Os01g0687600 | Length = 349 Score = 35.8 bits (81), Expect = 0.42 Identities = 23/92 (25%), Positives = 45/92 (48%) Frame = -2 Query: 365 KSPRDAGRRRNQGTDPTRPDRWSSRN*PRVARNQTREAKSMESPIDRSIGSLPPEAGRIP 186 +SP + R R + + P+R R SR+ R R+++RE + + A R Sbjct: 88 RSPSPSRRHRTRSSSPSRSRRHRSRSRERRRRSRSREREREDR-----------RASRRR 136 Query: 185 CEHRKQSRRGAEQKSKAIRNESR*GTRKKEEG 90 R +SR + + ++ +E+R G R++++G Sbjct: 137 SRSRSRSRSPSRRSGRSSYSENRHGDRRRDDG 168
>AK068046:Os01g0503500 | Length = 203 Score = 35.4 bits (80), Expect = 0.55 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -3 Query: 232 SIDRSDRYPRKRAESPASTGSKAGEER---SKNQRRFETNRDEGRERKRKETVAETRGGD 62 SI + PR+RA+ P +T S +G + +RR + GRE +R+E +GGD Sbjct: 130 SISLCSQRPRRRAQQPQATPSLSGPRHRTLAAGRRRRQCRGGRGREEERRERERLLKGGD 189
>Os02g0724600:Os02g0724600 | Length = 702 Score = 35.0 bits (79), Expect = 0.72 Identities = 26/108 (24%), Positives = 49/108 (45%) Frame = -1 Query: 408 RKTARATAVESKSSEITEGRRQATEPRNRPDPTRPMEFEKLTSGRTESDAGSEIDGIPHR 229 +K + V S+SS + E + +P + +P++ +K +T ++ S +DG+ Sbjct: 559 KKLSNTIPVASESSNVPEEAIEKADPSSDDPQKQPIQSKKHKDVKTTNEETSILDGVTK- 617 Query: 228 SIDRIATPGSGPNPLRAQEAKPARSGAKIKGDSKRIEMRDEKERGRKQ 85 D+ T + N + ++ S KIKGD K +E +KQ Sbjct: 618 --DKRQTHETLKNHKKGKKRNGPES-TKIKGDQKETHNEEEPTSEKKQ 662
>AK060476:Os01g0773700 | Length = 173 Score = 33.9 bits (76), Expect = 1.6 Identities = 26/87 (29%), Positives = 35/87 (40%) Frame = -3 Query: 316 PDPTDGVRETDLGSHGIRRGKRNRWNPPSIDRSDRYPRKRAESPASTGSKAGEERSKNQR 137 P P+ G ++ G R G R R + R R PR+ + A G EER + Sbjct: 6 PLPSSGKAASERSRQGNRHGHRQR-RRGDLRRCPRRPRRATWAAADEGE---EEREGEVQ 61 Query: 136 RFETNRDEGRERKRKETVAETRGGDSG 56 + D G R+ VA GGD G Sbjct: 62 LLQGGGDTGGGRQGSRRVATGDGGDGG 88
>AK060438:Os01g0773700 | Length = 186 Score = 33.9 bits (76), Expect = 1.6 Identities = 26/87 (29%), Positives = 35/87 (40%) Frame = -3 Query: 316 PDPTDGVRETDLGSHGIRRGKRNRWNPPSIDRSDRYPRKRAESPASTGSKAGEERSKNQR 137 P P+ G ++ G R G R R + R R PR+ + A G EER + Sbjct: 6 PLPSSGKAASERSRQGNRHGHRQR-RRGDLRRCPRRPRRATWAAADEGE---EEREGEVQ 61 Query: 136 RFETNRDEGRERKRKETVAETRGGDSG 56 + D G R+ VA GGD G Sbjct: 62 LLQGGGDTGGGRQGSRRVATGDGGDGG 88
>Os12g0226300:Os12g0226300 | Length = 337 Score = 33.5 bits (75), Expect = 2.1 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 2/121 (1%) Frame = -2 Query: 473 STRASKNRPRVN*YILDREPRTGRPHGRQPLNPNLLKSPRDAGRRRNQGTDPTRPDRWSS 294 + R + RP V R P P R+P P L++ AGRR P Sbjct: 210 AARRAGRRPAVR----PRAPPPRWPPPRRPRRPAALRAACRAGRR--PAAPAAAPSAAPP 263 Query: 293 RN*PRVARNQTREAKSMESPIDRSIGSLPPEAGR-IPCEHRKQSRRGAEQKSKA-IRNES 120 R PR + ++ R +G R I E RK+ R G E++ KA +R E Sbjct: 264 RGPPRRVPRRPPPRRAAPRAGCRHVGRAARRPARPIQKEERKEERAGKEERDKAGVREEE 323 Query: 119 R 117 R Sbjct: 324 R 324
>AK119859: | Length = 727 Score = 33.1 bits (74), Expect = 2.7 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Frame = -3 Query: 400 RTGDSR*IQIF*NHRGTQAGDGTKEPTRPDPTDGVRETDLGSHGIRRGKRNRWNPPSIDR 221 R SR + + + R ++ + P D R GS R G+R S D Sbjct: 523 RASRSRSRETYTSRRKSRYDSRSPPPKDDRRRDRTRSRSRGSGRRRGGRRRHSRSRSRDG 582 Query: 220 SDRY-PRKRA-ESPASTGSKAGEERSKNQRRFETNRDEGRERKRKET 86 DRY P A E+ A+ + A E K+ + RD+ R+RKR ++ Sbjct: 583 IDRYVPGGGAGETAAAASADAPTEDHKHDDSRDRKRDDSRDRKRGDS 629
>AK058639:Os08g0105700 | Length = 390 Score = 32.3 bits (72), Expect = 4.7 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 5318 LFSLLQWLINDSVCHVVQGEFYLIHG 5395 L LL W ND VCH V G+F+ G Sbjct: 208 LSELLNWFTNDIVCHAVSGKFFREEG 233
>AK067972:Os06g0114600 | Length = 412 Score = 32.3 bits (72), Expect = 4.7 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = -1 Query: 5178 SKPERSQTKKMTDFDWLPAWLALNNLQLQEGGSKKSPSMLHAKRNLDNRSFFRR 5017 S+P RS +K +T+ DWL + + ++ KKSP +L + L + FFR+ Sbjct: 365 SRPSRSFSKNLTERDWLRSSAKIWDM------VKKSPVILEYCKTLQDSGFFRK 412
>Os08g0447600:Os08g0447600 | Length = 168 Score = 32.0 bits (71), Expect = 6.1 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 15/129 (11%) Frame = -3 Query: 391 DSR*IQIF*NHRGTQAGDGTK---EPTRPDPTDGVRETDLGSHGIRRGKRNRWNPPSID- 224 DS IQ+F R T + + + + +R P R G+ R +R+R PP+ Sbjct: 9 DSPIIQVFNKSRSTSSNEERRRRRKSSRIHPARASRAAT-GTPHCRGRRRHRRTPPAWGT 67 Query: 223 ---RSDRYPRKRAESPASTGSKAG--------EERSKNQRRFETNRDEGRERKRKETVAE 77 R+ R PR+ P + G S+ + R R R+R+ Sbjct: 68 RSRRTRRTPRRGGAPPRPRSGRTGGWPPRRPLPRGSRRRPRRPRRRGRAASRRRRRGRRR 127 Query: 76 TRGGDSGGG 50 R G SGGG Sbjct: 128 ARVGRSGGG 136
>AK110130: | Length = 917 Score = 32.0 bits (71), Expect = 6.1 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = -2 Query: 473 STRASKNRPRVN*YILDREPRTGRPHGRQPLNPNLLKSPRDAGRRRNQGTDPTRPDRWSS 294 S R S + P+ +D PH + L P+ SPR AGR R Q + + W++ Sbjct: 805 SPRRSNSMPQAE---MDGAGEEAHPHVLRRLQPDASTSPRAAGRVRAQMVEDVEMEPWAA 861 Query: 293 RN*P-RVARNQTRE 255 + P V + RE Sbjct: 862 SSRPSSVVLQEARE 875
>AK121602:Os01g0869000 | Length = 830 Score = 32.0 bits (71), Expect = 6.1 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Frame = -3 Query: 328 EPTRPDPTDGVRETDLGSHGIRRGK--------RNRWNPPSIDRSDRYPRKRAESPASTG 173 +P R P R G H RR R++W P +D R R+ + G Sbjct: 7 QPPRFTPLPRRRVAGGGHHRRRRAAAPPPPLALRSQWRIPDVDADAVQERVRSWLSRARG 66 Query: 172 SKAGEERSKNQRRFETNRDEGRERKRKETVAE 77 + A + ++ EGR+++RKE + E Sbjct: 67 AIADAANAAREKGRSKEEAEGRKKRRKEALEE 98
>AK071635:Os01g0155600 | Length = 324 Score = 32.0 bits (71), Expect = 6.1 Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 9/118 (7%) Frame = -2 Query: 461 SKNRPRVN*YILDREPRTGRPHGRQPLNPNLLK----SPRDAGRRRNQGTDPTRP----- 309 S +R R Y + PR + R+ +P + SPRD+ R D P Sbjct: 174 SYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPR 233 Query: 308 DRWSSRN*PRVARNQTREAKSMESPIDRSIGSLPPEAGRIPCEHRKQSRRGAEQKSKA 135 D S R PR +R+ R A SP + S P A R P +S A+ +S A Sbjct: 234 DTQSPRGSPRDSRSPRRSA----SPPNGRNRSPTPNASRSPAPRDSRSPMRADSRSPA 287
>AK067351:Os01g0869000 | Length = 323 Score = 32.0 bits (71), Expect = 6.1 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Frame = -3 Query: 328 EPTRPDPTDGVRETDLGSHGIRRGK--------RNRWNPPSIDRSDRYPRKRAESPASTG 173 +P R P R G H RR R++W P +D R R+ + G Sbjct: 7 QPPRFTPLPRRRVAGGGHHRRRRAAAPPPPLALRSQWRIPDVDADAVQERVRSWLSRARG 66 Query: 172 SKAGEERSKNQRRFETNRDEGRERKRKETVAE 77 + A + ++ EGR+++RKE + E Sbjct: 67 AIADAANAAREKGRSKEEAEGRKKRRKEALEE 98
>AK066896:Os03g0270200 | Length = 840 Score = 32.0 bits (71), Expect = 6.1 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 8/99 (8%) Frame = -3 Query: 343 GDGTKEPTRPDPTDGVRETDLGS-HGIRRGKRNRWNPPSIDRSDR------YPRKRAESP 185 GD PD D E +L S H R R SI S R PR+R+ SP Sbjct: 165 GDAGNSRLGPDRADAEEEKELDSKHSSRTKSRESLRSRSISLSPRGRRRSVSPRRRSPSP 224 Query: 184 ASTGSKAGEERSKNQRRFETNRD-EGRERKRKETVAETR 71 + G ++ ++R R R+R + T + +R Sbjct: 225 SRNSISFGRQQRSSRRSVSPRRSFSPRKRSPRSTPSMSR 263
>AK060171:Os01g0155600 | Length = 324 Score = 32.0 bits (71), Expect = 6.1 Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 9/118 (7%) Frame = -2 Query: 461 SKNRPRVN*YILDREPRTGRPHGRQPLNPNLLK----SPRDAGRRRNQGTDPTRP----- 309 S +R R Y + PR + R+ +P + SPRD+ R D P Sbjct: 174 SYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPR 233 Query: 308 DRWSSRN*PRVARNQTREAKSMESPIDRSIGSLPPEAGRIPCEHRKQSRRGAEQKSKA 135 D S R PR +R+ R A SP + S P A R P +S A+ +S A Sbjct: 234 DTQSPRGSPRDSRSPRRSA----SPPNGRNRSPTPNASRSPAPRDSRSPMRADSRSPA 287
>Os03g0398400:Os03g0398400 | Length = 928 Score = 31.6 bits (70), Expect = 8.0 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 223 RSDRYPRKRAESPASTGSKAGEERSKNQRRFETNRDEGRERKRKETVAETRGGDSGGGAA 44 R +R RK AE G+ G R + +RR R+R A+ + + GGG A Sbjct: 43 RRNRRRRKAAEQGGDAGNGDGGRRRRRRRRL---------RRRSRAAAQAKAAEQGGGGA 93
>AK120650:Os06g0534800 | Length = 356 Score = 31.6 bits (70), Expect = 8.0 Identities = 32/118 (27%), Positives = 41/118 (34%), Gaps = 18/118 (15%) Frame = -3 Query: 349 QAGDGT----------KEPTRPDPTDGVRETDLGSHGI--------RRGKRNRWNPPSID 224 +AGDG + P R DP G +G G+ RR R + Sbjct: 12 RAGDGELQLHAAVHHHRRPRRRDPVHGDPVRPVGDVGVAPAAGRRRRRRAARRAARAELG 71 Query: 223 RSDRYPRKRAESPASTGSKAGEERSKNQRRFETNRDEGRERKRKETVAETRGGDSGGG 50 R R P G AG R R+EGR +++ E GGD GGG Sbjct: 72 RHRRAPHVHVPGARGGGVAAGRRR----------REEGRRQRQGE------GGDDGGG 113
>AK108739:Os06g0534800 | Length = 356 Score = 31.6 bits (70), Expect = 8.0 Identities = 32/118 (27%), Positives = 41/118 (34%), Gaps = 18/118 (15%) Frame = -3 Query: 349 QAGDGT----------KEPTRPDPTDGVRETDLGSHGI--------RRGKRNRWNPPSID 224 +AGDG + P R DP G +G G+ RR R + Sbjct: 12 RAGDGELQLHAAVHHHRRPRRRDPVHGDPVRPVGDVGVAPAAGRRRRRRAARRAARAELG 71 Query: 223 RSDRYPRKRAESPASTGSKAGEERSKNQRRFETNRDEGRERKRKETVAETRGGDSGGG 50 R R P G AG R R+EGR +++ E GGD GGG Sbjct: 72 RHRRAPHVHVPGARGGGVAAGRRR----------REEGRRQRQGE------GGDDGGG 113 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 187,693,814 Number of extensions: 4219954 Number of successful extensions: 9874 Number of sequences better than 10.0: 21 Number of HSP's gapped: 9837 Number of HSP's successfully gapped: 21 Length of query: 2260 Length of database: 15,399,855 Length adjustment: 117 Effective length of query: 2143 Effective length of database: 10,715,058 Effective search space: 22962369294 Effective search space used: 22962369294 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
