ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76i22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071737:Os09g0323500 | 519 | e-147 | 2 | Os04g0564500:Os04g0564500 | 301 | 5e-82 | 3 | AK119391:Os07g0191600 | 39 | 0.008 | 4 | AK102563:Os07g0191600 | 39 | 0.008 | 5 | AK071418:Os07g0191600 | 39 | 0.008 | 6 | AK060528: | 32 | 1.3 | 7 | AK106307:Os07g0563400 | 32 | 1.3 | 8 | AK120019:Os01g0862500 | 31 | 1.7 | 9 | AK069258:Os10g0564100 | 31 | 2.3 | 10 | Os03g0141900:Os03g0141900 | 30 | 5.0 | 11 | AK110126: | 29 | 6.6 | 12 | AK120760:Os01g0930200 | 29 | 8.5 | 13 | AK101182:Os09g0456800 | 29 | 8.5 | 14 | AK061433:Os09g0456800 | 29 | 8.5 | 15 | AK108228:Os09g0244600 | 29 | 8.6 |
|---|
>AK071737:Os09g0323500 | Length = 266 Score = 519 bits (1337), Expect = e-147 Identities = 247/266 (92%), Positives = 254/266 (95%) Frame = +2 Query: 98 MCIAAWIWQAHPQHQXXXXXNRDEFHSRPTKAVGWWGEGSMKILGGRDVLGGGTWMGSTK 277 MCIAAW+WQAHPQHQ NRDEFHSRPTKAVGWWGEGS KILGGRDVLGGGTWMG TK Sbjct: 1 MCIAAWVWQAHPQHQLLLLLNRDEFHSRPTKAVGWWGEGSKKILGGRDVLGGGTWMGCTK 60 Query: 278 DGRLAFLTNVLEPDAMPGARTRGDLPLRFLQGNKSPLEVATEVAKEADEYNGFNLILADL 457 DGRLAFLTNVLEPDAMPGARTRGDLPLRFLQ NKSPLEVATEVAKEADEYNGFNL+LADL Sbjct: 61 DGRLAFLTNVLEPDAMPGARTRGDLPLRFLQSNKSPLEVATEVAKEADEYNGFNLVLADL 120 Query: 458 TRNVMVYVSNRPKGQPATIQLVSPGLHVLSNARLDSPWQKAIRLGKNFREFIRKHGDDEV 637 T NVMVYVSNRPKGQPATIQLVSPGLHVLSNARLDSPWQKAIRLGKNFRE +RKHGDDEV Sbjct: 121 TTNVMVYVSNRPKGQPATIQLVSPGLHVLSNARLDSPWQKAIRLGKNFREHLRKHGDDEV 180 Query: 638 EAKDIADRLMTDTTRADKDRLPNTGCDPTWEHGLSSIFIEVQTDEGLYGTRSTAVLSVNY 817 EAKDI +RLMTDTT+ADKDRLPNTGCDP WEHGLSSIFIEVQTD+GLYGTRSTAVLSVNY Sbjct: 181 EAKDIVERLMTDTTKADKDRLPNTGCDPNWEHGLSSIFIEVQTDQGLYGTRSTAVLSVNY 240 Query: 818 DGEASLYEKYLESGIWKNHTVHYQIE 895 DGEASLYEKYLESGIWK+HTVHYQIE Sbjct: 241 DGEASLYEKYLESGIWKDHTVHYQIE 266
>Os04g0564500:Os04g0564500 | Length = 314 Score = 301 bits (772), Expect = 5e-82 Identities = 144/297 (48%), Positives = 189/297 (63%), Gaps = 31/297 (10%) Frame = +2 Query: 98 MCIAAWIWQAHPQHQXXXXXNRDEFHSR----------------------------PTKA 193 MCIAAW WQ+ P H+ NRDE+HSR PT+ Sbjct: 1 MCIAAWAWQSQPAHRLLLLFNRDEYHSRCAPCSVPSIPTPYNSHLLTRARRDFLSRPTQP 60 Query: 194 VGWWGEGSMK---ILGGRDVLGGGTWMGSTKDGRLAFLTNVLEPDAMPGARTRGDLPLRF 364 GWW G + ILGGRD LGGGTW+G T+DG+LAFLTNV EP + G RG+LP+RF Sbjct: 61 AGWWAAGKAEVKLILGGRDELGGGTWLGCTRDGKLAFLTNVREPGTLVGPNVRGELPVRF 120 Query: 365 LQGNKSPLEVATEVAKEADEYNGFNLILADLTRNVMVYVSNRPKGQPATIQLVSPGLHVL 544 LQGN+ PLE A E+AKEAD+YNGFNL+LAD+ M Y+SNRP+G P +Q V PG HVL Sbjct: 121 LQGNQCPLEYAEEIAKEADQYNGFNLVLADVQSGNMAYISNRPEGDP-VVQKVLPGFHVL 179 Query: 545 SNARLDSPWQKAIRLGKNFREFIRKHGDDEVEAKDIADRLMTDTTRADKDRLPNTGCDPT 724 SNA +D PW K +RLG++F F+ EV + + + LM D +ADK +P+TG DP Sbjct: 180 SNAAIDCPWPKMLRLGQSFNRFLATQDGAEVSLQQMVEELMMDPVKADKSAVPDTGVDPD 239 Query: 725 WEHGLSSIFIEVQTDEGLYGTRSTAVLSVNYDGEASLYEKYLESGIWKNHTVHYQIE 895 WE+ LSSIFI+ + + YGTRS L+V ++GE + YE+YLES +WK + + +++E Sbjct: 240 WEYQLSSIFIDTEKGQARYGTRSMTALAVKFNGEVTFYERYLESNLWKENLMQFELE 296
>AK119391:Os07g0191600 | Length = 333 Score = 38.9 bits (89), Expect = 0.008 Identities = 24/55 (43%), Positives = 28/55 (50%) Frame = -1 Query: 357 RGRSPLVRAPGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSPHHPT 193 RG SP V P +A S R AS PS + PPP PP+ +IEP P PT Sbjct: 173 RGPSP-VPTPALAPASPPRHRPASPPSYLARPPPPPPGYIEPPQGYIEPPPPEPT 226
>AK102563:Os07g0191600 | Length = 333 Score = 38.9 bits (89), Expect = 0.008 Identities = 24/55 (43%), Positives = 28/55 (50%) Frame = -1 Query: 357 RGRSPLVRAPGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSPHHPT 193 RG SP V P +A S R AS PS + PPP PP+ +IEP P PT Sbjct: 173 RGPSP-VPTPALAPASPPRHRPASPPSYLARPPPPPPGYIEPPQGYIEPPPPEPT 226
>AK071418:Os07g0191600 | Length = 333 Score = 38.9 bits (89), Expect = 0.008 Identities = 24/55 (43%), Positives = 28/55 (50%) Frame = -1 Query: 357 RGRSPLVRAPGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSPHHPT 193 RG SP V P +A S R AS PS + PPP PP+ +IEP P PT Sbjct: 173 RGPSP-VPTPALAPASPPRHRPASPPSYLARPPPPPPGYIEPPQGYIEPPPPEPT 226
>AK060528: | Length = 100 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 7 HTHTHTHTQGARLQNKGVIFRSRE 78 +THTHTHT R+Q V++RS E Sbjct: 7 YTHTHTHTHTPRIQAALVLYRSSE 30
>AK106307:Os07g0563400 | Length = 333 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -1 Query: 330 PGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSP 205 P AS ++LVR A +P V + VP P+ ++P + + P P Sbjct: 76 PQAASADASLVRPAPVPVPVPVVAVPAPAVTMPMEVPVVPVP 117
>AK120019:Os01g0862500 | Length = 251 Score = 31.2 bits (69), Expect = 1.7 Identities = 21/54 (38%), Positives = 29/54 (53%) Frame = -1 Query: 357 RGRSPLVRAPGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSPHHP 196 R SPL+ A G ASG A+ S +LP ++P + + PPRI + S H P Sbjct: 171 RASSPLLDA-GCASGGEEWC--ANSMSSLLPCYLPGGAAAPPPRIAVPTSRHFP 221
>AK069258:Os10g0564100 | Length = 202 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -1 Query: 333 APGIASGSSTLVRKASLPSLVLPIHVPPPSTSLPPRIFIEPSPHHPTAFVG 181 AP A +T+ A +PS V+P V PS+SLPP S P F G Sbjct: 127 APAPAPAPATVPPAAPVPSTVVP-PVAAPSSSLPPMSAAGASAMSPMQFAG 176
>Os03g0141900:Os03g0141900 | Length = 623 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -1 Query: 330 PGIASGSSTLVRKASLP-SLVLPIHVPPPSTSLPPRIFIEPSP 205 PG +S SLP SL L + +PPP+ S PP +P P Sbjct: 394 PGFDGPNSARPISVSLPGSLSLSLSLPPPARSFPPPPPAQPRP 436
>AK110126: | Length = 905 Score = 29.3 bits (64), Expect = 6.6 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 5/27 (18%) Frame = -1 Query: 267 PIHV-----PPPSTSLPPRIFIEPSPH 202 P HV PPP+ LPP + PSPH Sbjct: 145 PFHVSDLDQPPPAIILPPNSSVTPSPH 171
>AK120760:Os01g0930200 | Length = 172 Score = 28.9 bits (63), Expect = 8.5 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -2 Query: 314 ARAHWSGRQACHLWCSPSMFLHRVHPCHQESSLSPRPTIL 195 A A SGR+A L C+P +VHPC + L P P +L Sbjct: 17 AAASNSGREAAVL-CAPRPRRVQVHPCSADLILGPPPFLL 55
>AK101182:Os09g0456800 | Length = 302 Score = 28.9 bits (63), Expect = 8.5 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 1163 LYYRHCTFSSSIQ*ISTLMFTKCIP 1237 L+++HC FSS ++ ++T F K +P Sbjct: 72 LHFKHCNFSSFVRQLNTYGFRKVVP 96
>AK061433:Os09g0456800 | Length = 302 Score = 28.9 bits (63), Expect = 8.5 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 1163 LYYRHCTFSSSIQ*ISTLMFTKCIP 1237 L+++HC FSS ++ ++T F K +P Sbjct: 72 LHFKHCNFSSFVRQLNTYGFRKVVP 96
>AK108228:Os09g0244600 | Length = 174 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = -1 Query: 360 LRGRSPLVRAPGIASGSSTLVRKASL--PSLVLPIHVPPPSTSLPP 229 LR RSP+ +P + + P LV P+ PPPS+S PP Sbjct: 96 LRPRSPVASSPPSRAPGHQIRSLCGWGPPDLVTPMLRPPPSSSTPP 141 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,976,773 Number of extensions: 896574 Number of successful extensions: 3094 Number of sequences better than 10.0: 15 Number of HSP's gapped: 3057 Number of HSP's successfully gapped: 15 Length of query: 442 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 338 Effective length of database: 11,235,591 Effective search space: 3797629758 Effective search space used: 3797629758 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
