ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76i22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001069406.1| Oryza sativa (japonica cultivar-group) Os09g... 803 0.0
2dbj|AK071737.1| Oryza sativa (japonica cultivar-group) cDNA clon... 803 0.0
3gb|AY112206.1| Zea mays CL9766_1 mRNA sequence 484 e-133
4gb|BT023985.1| Zea mays clone EL01N0413G11 mRNA sequence 444 e-121
5emb|CT828596.1| Oryza sativa (indica cultivar-group) cDNA clone:... 305 2e-79
6emb|CT828597.1| Oryza sativa (indica cultivar-group) cDNA clone:... 272 3e-69
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 226 2e-55
8dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic D... 226 2e-55
9dbj|AB108267.1| Phleum pratense DNA, SSR, microsatellite A16-A08 46 0.32
10emb|BX511019.6| Zebrafish DNA sequence from clone CH211-89O9 in ... 46 0.32
11ref|NM_124968.1| Arabidopsis thaliana unknown protein (AT5G55860... 44 1.3
12gb|AY735732.1| Arabidopsis thaliana hypothetical protein AT5G558... 44 1.3
13gb|DQ056724.1| Arabidopsis thaliana hypothetical protein (At5g55... 44 1.3
14dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 1.3
15gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 42 5.0
16ref|XM_001054775.1| PREDICTED: Rattus norvegicus similar to bone... 42 5.0
17ref|XM_657725.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 5.0
18gb|AC112153.4| Mus musculus BAC clone RP24-93G11 from chromosome... 42 5.0
19gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, comple... 42 5.0
20ref|NM_079317.2| Drosophila melanogaster twin of eyg CG10704-RA ... 42 5.0
21gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 42 5.0
22gb|AC125618.1| Homo sapiens 3 BAC RP11-510K16 (Roswell Park Canc... 42 5.0
23gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 42 5.0
24gb|AC087710.8| Homo sapiens chromosome 8, clone RP11-11A18, comp... 42 5.0
25gb|AC006161.3| Arabidopsis thaliana chromosome 2 clone T14A4 map... 42 5.0
26gb|AY069177.1| Drosophila melanogaster GH22493 full length cDNA 42 5.0
27gb|AC024996.6| Homo sapiens chromosome 8, clone RP11-697C18, com... 42 5.0
28emb|AL139247.12| Human DNA sequence from clone RP1-52J10 on chro... 42 5.0
29gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, com... 42 5.0
30emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4... 42 5.0
31gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Can... 42 5.0
32gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, com... 42 5.0
33dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 5.0
34dbj|BS000073.1| Pan troglodytes chromosome 22 clone:RP43-040P11,... 42 5.0
35emb|AJ871176.1| Bos taurus ABCG2 gene, PKD2 gene and SPP1 gene, ... 42 5.0
36gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, comple... 42 5.0
37emb|AL713968.9| Mouse DNA sequence from clone RP23-387L21 on chr... 42 5.0

>ref|NM_001069406.1| Oryza sativa (japonica cultivar-group) Os09g0323500 (Os09g0323500)
           mRNA, complete cds
          Length = 1102
 Score =  803 bits (405), Expect = 0.0
 Identities = 708/809 (87%)
 Strand = Plus / Plus

                                                                       
Query: 90  ctgaagccatgtgtatcgctgcatggatttggcaggctcacccacagcatcagctcctgc 149
           |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
Sbjct: 53  ctgaagccatgtgtatagctgcatgggtttggcaagctcacccacagcaccagctcctcc 112

                                                                       
Query: 150 tgctgctcaacagagatgagttccatagcaggcctacaaaggcagtaggatggtggggcg 209
           ||||||||||| | |||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 113 tgctgctcaaccgggatgagttccatagcaggccaaccaaggcagtaggatggtgggggg 172

                                                                       
Query: 210 agggctcaatgaagattcttggtggcagggatgtactcggtggaggaacatggatgggga 269
           ||||||| | ||||||||||||||| || ||||| || |||||||| |||||||||||  
Sbjct: 173 agggctcgaagaagattcttggtggtagagatgttcttggtggagggacatggatgggtt 232

                                                                       
Query: 270 gcaccaaagatggcaggcttgccttcctgaccaatgtgctcgagcctgatgcaatgcccg 329
           |||| || ||||||||||| |||||||| ||||||||||||||||| || || ||||| |
Sbjct: 233 gcacaaaggatggcaggctcgccttcctcaccaatgtgctcgagccggacgccatgccgg 292

                                                                       
Query: 330 gcgcacgcactaggggagacctgcccctcaggttcctgcagggaaacaagagcccactgg 389
           | || ||||| |||||||| || |||||||||||||||||| | |||||||||||||| |
Sbjct: 293 gggcgcgcacaaggggagatctccccctcaggttcctgcagagcaacaagagcccacttg 352

                                                                       
Query: 390 aggttgcgactgaagtggcaaaagaagctgatgagtacaatggcttcaaccttatactag 449
           | ||||| ||||| ||||||||||||||||| |||||||| |||||||||||| |||| |
Sbjct: 353 aagttgcaactgaggtggcaaaagaagctgacgagtacaacggcttcaaccttgtactgg 412

                                                                       
Query: 450 ctgatctaaccaggaatgtcatggtctacgtgtcaaaccggccaaaggggcagcctgcga 509
           ||||||| ||||  || |||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 413 ctgatctgaccacaaacgtcatggtttatgtgtcaaatcggccaaaggggcagcctgcaa 472

                                                                       
Query: 510 caattcagctcgtctcaccaggactccatgtgttgtccaatgcaaggcttgatagccctt 569
           | || || || ||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct: 473 cgatccaacttgtctcaccagggctccatgtgttgtccaatgcaaggctagacagccctt 532

                                                                       
Query: 570 ggcagaaggcaattcgccttggtaaaaacttcagggagtttataaggaagcatggtgatg 629
           |||||||||| |||||||| ||||| ||||||||||||  | | ||||||||||||||||
Sbjct: 533 ggcagaaggcgattcgcctcggtaagaacttcagggagcatcttaggaagcatggtgatg 592

                                                                       
Query: 630 atgaagttgaagcgaaggatatagctgacagactaatgactgacacgacgagggctgata 689
           |||| |||||||| ||||| |||| ||| || |||||||||||||| || | |||||| |
Sbjct: 593 atgaggttgaagccaaggacatagttgagaggctaatgactgacaccacaaaggctgaca 652

                                                                       
Query: 690 aagataggctgccaaacaccggttgtgatcccacctgggagcacggtctgagctccatct 749
           ||||||||||||||||||| || |||||||| | |||||||||||| ||||||||||| |
Sbjct: 653 aagataggctgccaaacactggctgtgatccaaactgggagcacggcctgagctccattt 712

                                                                       
Query: 750 tcatcgaggtgcaaactgacgaagggctctatgggacaaggagcacagcagttctttcag 809
           |||| |||||||| |||||| | || ||||| |||||| ||||||| || ||||| ||||
Sbjct: 713 tcattgaggtgcagactgaccagggactctacgggacacggagcacggccgttctatcag 772

                                                                       
Query: 810 tgaactatgatggagaagctagcttatatgaaaagtacctcgagagtggtatatggaaga 869
           ||||||| || || ||||||||||| || || || ||||| |||||||||||||||||| 
Sbjct: 773 tgaactacgacggtgaagctagcttgtacgagaaatacctggagagtggtatatggaagg 832

                                        
Query: 870 accacacagtgcattaccagatagagtag 898
           | ||||| |||||||||||||||||||||
Sbjct: 833 atcacacggtgcattaccagatagagtag 861



to top

>dbj|AK071737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109A10, full
           insert sequence
          Length = 1103

 Score =  803 bits (405), Expect = 0.0
 Identities = 708/809 (87%)
 Strand = Plus / Plus

                                                                       
Query: 90  ctgaagccatgtgtatcgctgcatggatttggcaggctcacccacagcatcagctcctgc 149
           |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
Sbjct: 54  ctgaagccatgtgtatagctgcatgggtttggcaagctcacccacagcaccagctcctcc 113

                                                                       
Query: 150 tgctgctcaacagagatgagttccatagcaggcctacaaaggcagtaggatggtggggcg 209
           ||||||||||| | |||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 114 tgctgctcaaccgggatgagttccatagcaggccaaccaaggcagtaggatggtgggggg 173

                                                                       
Query: 210 agggctcaatgaagattcttggtggcagggatgtactcggtggaggaacatggatgggga 269
           ||||||| | ||||||||||||||| || ||||| || |||||||| |||||||||||  
Sbjct: 174 agggctcgaagaagattcttggtggtagagatgttcttggtggagggacatggatgggtt 233

                                                                       
Query: 270 gcaccaaagatggcaggcttgccttcctgaccaatgtgctcgagcctgatgcaatgcccg 329
           |||| || ||||||||||| |||||||| ||||||||||||||||| || || ||||| |
Sbjct: 234 gcacaaaggatggcaggctcgccttcctcaccaatgtgctcgagccggacgccatgccgg 293

                                                                       
Query: 330 gcgcacgcactaggggagacctgcccctcaggttcctgcagggaaacaagagcccactgg 389
           | || ||||| |||||||| || |||||||||||||||||| | |||||||||||||| |
Sbjct: 294 gggcgcgcacaaggggagatctccccctcaggttcctgcagagcaacaagagcccacttg 353

                                                                       
Query: 390 aggttgcgactgaagtggcaaaagaagctgatgagtacaatggcttcaaccttatactag 449
           | ||||| ||||| ||||||||||||||||| |||||||| |||||||||||| |||| |
Sbjct: 354 aagttgcaactgaggtggcaaaagaagctgacgagtacaacggcttcaaccttgtactgg 413

                                                                       
Query: 450 ctgatctaaccaggaatgtcatggtctacgtgtcaaaccggccaaaggggcagcctgcga 509
           ||||||| ||||  || |||||||| || |||||||| |||||||||||||||||||| |
Sbjct: 414 ctgatctgaccacaaacgtcatggtttatgtgtcaaatcggccaaaggggcagcctgcaa 473

                                                                       
Query: 510 caattcagctcgtctcaccaggactccatgtgttgtccaatgcaaggcttgatagccctt 569
           | || || || ||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct: 474 cgatccaacttgtctcaccagggctccatgtgttgtccaatgcaaggctagacagccctt 533

                                                                       
Query: 570 ggcagaaggcaattcgccttggtaaaaacttcagggagtttataaggaagcatggtgatg 629
           |||||||||| |||||||| ||||| ||||||||||||  | | ||||||||||||||||
Sbjct: 534 ggcagaaggcgattcgcctcggtaagaacttcagggagcatcttaggaagcatggtgatg 593

                                                                       
Query: 630 atgaagttgaagcgaaggatatagctgacagactaatgactgacacgacgagggctgata 689
           |||| |||||||| ||||| |||| ||| || |||||||||||||| || | |||||| |
Sbjct: 594 atgaggttgaagccaaggacatagttgagaggctaatgactgacaccacaaaggctgaca 653

                                                                       
Query: 690 aagataggctgccaaacaccggttgtgatcccacctgggagcacggtctgagctccatct 749
           ||||||||||||||||||| || |||||||| | |||||||||||| ||||||||||| |
Sbjct: 654 aagataggctgccaaacactggctgtgatccaaactgggagcacggcctgagctccattt 713

                                                                       
Query: 750 tcatcgaggtgcaaactgacgaagggctctatgggacaaggagcacagcagttctttcag 809
           |||| |||||||| |||||| | || ||||| |||||| ||||||| || ||||| ||||
Sbjct: 714 tcattgaggtgcagactgaccagggactctacgggacacggagcacggccgttctatcag 773

                                                                       
Query: 810 tgaactatgatggagaagctagcttatatgaaaagtacctcgagagtggtatatggaaga 869
           ||||||| || || ||||||||||| || || || ||||| |||||||||||||||||| 
Sbjct: 774 tgaactacgacggtgaagctagcttgtacgagaaatacctggagagtggtatatggaagg 833

                                        
Query: 870 accacacagtgcattaccagatagagtag 898
           | ||||| |||||||||||||||||||||
Sbjct: 834 atcacacggtgcattaccagatagagtag 862



to top

>gb|AY112206.1| Zea mays CL9766_1 mRNA sequence
          Length = 674

 Score =  484 bits (244), Expect = e-133
 Identities = 415/474 (87%)
 Strand = Plus / Minus

                                                                       
Query: 425 tacaatggcttcaaccttatactagctgatctaaccaggaatgtcatggtctacgtgtca 484
           ||||||||||||||||| ||||||||||||||| | |  ||| ||||||| || ||||||
Sbjct: 657 tacaatggcttcaacctcatactagctgatctancaacaaatatcatggtttatgtgtca 598

                                                                       
Query: 485 aaccggccaaaggggcagcctgcgacaattcagctcgtctcaccaggactccatgtgttg 544
           |||||||| ||||| ||||||||  ||||||| ||||| |||||||||||||||||| ||
Sbjct: 597 aaccggcctaagggtcagcctgcaccaattcaactcgtgtcaccaggactccatgtgctg 538

                                                                       
Query: 545 tccaatgcaaggcttgatagcccttggcagaaggcaattcgccttggtaaaaacttcagg 604
           |||||||||||||| ||||||||||||||||||||||||| ||| |||     |||||||
Sbjct: 537 tccaatgcaaggctagatagcccttggcagaaggcaattctcctcggtnnnnncttcagg 478

                                                                       
Query: 605 gagtttataaggaagcatggtgatgatgaagttgaagcgaaggatatagctgacagacta 664
           ||| || | ||| ||||||||| |||||| ||||||| ||||||||||| ||| || |||
Sbjct: 477 gagcttcttagggagcatggtgctgatgaggttgaagtgaaggatatagttgagaggcta 418

                                                                       
Query: 665 atgactgacacgacgagggctgataaagataggctgccaaacaccggttgtgatcccacc 724
           |||||||||||  | | |||||| |||||||| ||||||||||| ||||||||||||| |
Sbjct: 417 atgactgacaccccaaaggctgacaaagatagactgccaaacactggttgtgatcccaac 358

                                                                       
Query: 725 tgggagcacggtctgagctccatcttcatcgaggtgcaaactgacgaagggctctatggg 784
           |||||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||
Sbjct: 357 tgggagcatggtctgagctccatcttcattgaggtgcaaactgaccaagggccctatggg 298

                                                                       
Query: 785 acaaggagcacagcagttctttcagtgaactatgatggagaagctagcttatatgaaaag 844
           ||| |||||||||| ||| | ||||||||||||||||| ||||||||||| || || |||
Sbjct: 297 acacggagcacagccgttttatcagtgaactatgatggcgaagctagcttgtacgagaag 238

                                                                 
Query: 845 tacctcgagagtggtatatggaagaaccacacagtgcattaccagatagagtag 898
           || || |||||||||||||||||| | |||||||||  ||||||||||||||||
Sbjct: 237 tatcttgagagtggtatatggaaggatcacacagtgagttaccagatagagtag 184



to top

>gb|BT023985.1| Zea mays clone EL01N0413G11 mRNA sequence
          Length = 1591

 Score =  444 bits (224), Expect = e-121
 Identities = 361/404 (89%), Gaps = 2/404 (0%)
 Strand = Plus / Plus

                                                                       
Query: 177 gcaggcctacaaaggcagtaggatggtggggcgagggctcaatgaagattcttggtggca 236
           ||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||
Sbjct: 88  gcaggcctacaaaagcagtaggatggtggggtgaaggctcaaagaagatccttggtggca 147

                                                                       
Query: 237 gggatgtactcggtggaggaacatggatggggagcaccaaagatggcaggcttgccttcc 296
           ||||||| || ||||||||||||||| ||||| ||||||| ||||| |||||||||||||
Sbjct: 148 gggatgtgcttggtggaggaacatgggtggggtgcaccaaggatggaaggcttgccttcc 207

                                                                       
Query: 297 tgaccaatgtgctcgagcctgatgcaatgcccggcgcacgcactaggggagacctgcccc 356
           ||||||||||||| || || ||||| |||||||| ||||| ||||||||||| ||||| |
Sbjct: 208 tgaccaatgtgcttgaaccagatgccatgcccggtgcacggactaggggagatctgcctc 267

                                                                       
Query: 357 tcaggttcctgcagggaaacaagagcccactggaggttgcgactgaagtggcaaaagaag 416
           |||  ||||||||| | |||||||||||||| || ||||| |||||||||||| ||||||
Sbjct: 268 tcaaattcctgcagagcaacaagagcccactcgaagttgcaactgaagtggcagaagaag 327

                                                                       
Query: 417 ctgatgagtacaatggcttcaaccttatactagctgatctaaccaggaatgtcatggtct 476
           ||||||| ||||||||||||||||| ||||||||||||||||| |  ||| ||||||| |
Sbjct: 328 ctgatgaatacaatggcttcaacctcatactagctgatctaacaacaaatatcatggttt 387

                                                                       
Query: 477 acgtgtcaaaccggcc-aaaggggcagcctgcgacaattcagctcgtctcaccaggactc 535
           | |||||||||||||| |||||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 388 atgtgtcaaaccggcctaaagggtcagcctgcaacaattcaactcgtgtcaccaggactc 447

                                                       
Query: 536 catgtgttgtccaatgcaa-ggcttgatagcccttggcagaagg 578
           |||||| |||||||||||| |||| |||||||||||||||||||
Sbjct: 448 catgtgctgtccaatgcaagggctagatagcccttggcagaagg 491



 Score =  218 bits (110), Expect = 4e-53
 Identities = 173/194 (89%)
 Strand = Plus / Plus

                                                                        
Query: 576  aggcaattcgccttggtaaaaacttcagggagtttataaggaagcatggtgatgatgaag 635
            ||||||||| ||| |||||||||||||||||| || | ||| ||||||||| |||||| |
Sbjct: 963  aggcaattctcctcggtaaaaacttcagggagcttcttagggagcatggtgctgatgagg 1022

                                                                        
Query: 636  ttgaagcgaaggatatagctgacagactaatgactgacacgacgagggctgataaagata 695
            |||||| ||||||||||| ||| || |||||||||||||| || | |||||| |||||||
Sbjct: 1023 ttgaagtgaaggatatagttgagaggctaatgactgacaccacaaaggctgacaaagata 1082

                                                                        
Query: 696  ggctgccaaacaccggttgtgatcccacctgggagcacggtctgagctccatcttcatcg 755
            | ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |
Sbjct: 1083 gactgccaaacactggttgtgatcccaactgggagcatggtctgagctccatcttcattg 1142

                          
Query: 756  aggtgcaaactgac 769
            ||||||||||||||
Sbjct: 1143 aggtgcaaactgac 1156



 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 105/127 (82%), Gaps = 1/127 (0%)
 Strand = Plus / Plus

                                                                        
Query: 773  gggctctatgggacaaggagcacagcagttctttc-agtgaactatgatggagaagctag 831
            |||| |||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||
Sbjct: 1297 gggccctatgggacagggagcacagccgttttctccagtgaactatgatggcgaagctag 1356

                                                                        
Query: 832  cttatatgaaaagtacctcgagagtggtatatggaagaaccacacagtgcattaccagat 891
            ||| || || ||||| ||     |||||||||||||| | | | |||||  |||||||||
Sbjct: 1357 cttgtacgagaagtatcttccacgtggtatatggaaggatcccccagtgagttaccagat 1416

                   
Query: 892  agagtag 898
            |||||||
Sbjct: 1417 agagtag 1423



to top

>emb|CT828596.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI008B22, full
           insert sequence
          Length = 719

 Score =  305 bits (154), Expect = 2e-79
 Identities = 250/282 (88%)
 Strand = Plus / Plus

                                                                       
Query: 90  ctgaagccatgtgtatcgctgcatggatttggcaggctcacccacagcatcagctcctgc 149
           |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
Sbjct: 54  ctgaagccatgtgtatagctgcatgggtttggcaagctcacccacagcaccagctcctcc 113

                                                                       
Query: 150 tgctgctcaacagagatgagttccatagcaggcctacaaaggcagtaggatggtggggcg 209
           ||||||||||| | |||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 114 tgctgctcaaccgggatgagttccatagcaggccaaccaaggcagtaggatggtgggggg 173

                                                                       
Query: 210 agggctcaatgaagattcttggtggcagggatgtactcggtggaggaacatggatgggga 269
           ||||||| | ||||||||||||||| || ||||| || |||||||| |||||||||||  
Sbjct: 174 agggctcgaagaagattcttggtggtagagatgttcttggtggagggacatggatgggtt 233

                                                                       
Query: 270 gcaccaaagatggcaggcttgccttcctgaccaatgtgctcgagcctgatgcaatgcccg 329
           |||| || ||||||||||| |||||||| ||||||||||||||||| || || ||||| |
Sbjct: 234 gcacaaaggatggcaggctcgccttcctcaccaatgtgctcgagccggacgccatgccgg 293

                                                     
Query: 330 gcgcacgcactaggggagacctgcccctcaggttcctgcagg 371
           | || ||||| |||||||| || |||||||||||||||||||
Sbjct: 294 gggcgcgcacaaggggagatctccccctcaggttcctgcagg 335



to top

>emb|CT828597.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009J13, full
           insert sequence
          Length = 738

 Score =  272 bits (137), Expect = 3e-69
 Identities = 248/285 (87%)
 Strand = Plus / Plus

                                                                       
Query: 614 aggaagcatggtgatgatgaagttgaagcgaaggatatagctgacagactaatgactgac 673
           |||||||||||||||||||| |||||||| ||||| |||| ||| || ||||||||||||
Sbjct: 215 aggaagcatggtgatgatgaggttgaagccaaggacatagttgagaggctaatgactgac 274

                                                                       
Query: 674 acgacgagggctgataaagataggctgccaaacaccggttgtgatcccacctgggagcac 733
           || || | |||||| |||||||||||||||||||| || |||||||| | ||||||||||
Sbjct: 275 accacaaaggctgacaaagataggctgccaaacactggctgtgatccaaactgggagcac 334

                                                                       
Query: 734 ggtctgagctccatcttcatcgaggtgcaaactgacgaagggctctatgggacaaggagc 793
           || ||||||||||| ||||| |||||||| |||||| | || ||||| |||||| |||||
Sbjct: 335 ggcctgagctccattttcattgaggtgcagactgaccagggactctacgggacacggagc 394

                                                                       
Query: 794 acagcagttctttcagtgaactatgatggagaagctagcttatatgaaaagtacctcgag 853
           || || ||||| ||||||||||| || || ||||||||||| || || || ||||| |||
Sbjct: 395 acggccgttctatcagtgaactacgacggtgaagctagcttgtacgagaaatacctggag 454

                                                        
Query: 854 agtggtatatggaagaaccacacagtgcattaccagatagagtag 898
           ||||||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 455 agtggtatatggaaggatcacacggtgcattaccagatagagtag 499



 Score =  224 bits (113), Expect = 6e-55
 Identities = 182/205 (88%)
 Strand = Plus / Plus

                                                                       
Query: 374 aacaagagcccactggaggttgcgactgaagtggcaaaagaagctgatgagtacaatggc 433
           |||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| |||
Sbjct: 1   aacaagagcccacttgaagttgcaactgaggtggcaaaagaagctgacgagtacaacggc 60

                                                                       
Query: 434 ttcaaccttatactagctgatctaaccaggaatgtcatggtctacgtgtcaaaccggcca 493
           ||||||||| |||| |||||||| ||||  || |||||||| || |||||||| ||||||
Sbjct: 61  ttcaaccttgtactggctgatctgaccacaaacgtcatggtttatgtgtcaaatcggcca 120

                                                                       
Query: 494 aaggggcagcctgcgacaattcagctcgtctcaccaggactccatgtgttgtccaatgca 553
           |||||||||||||| || || || || ||||||||||| |||||||||||||||||||||
Sbjct: 121 aaggggcagcctgcaacgatccaacttgtctcaccagggctccatgtgttgtccaatgca 180

                                    
Query: 554 aggcttgatagcccttggcagaagg 578
           ||||| || ||||||||||||||||
Sbjct: 181 aggctagacagcccttggcagaagg 205



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  226 bits (114), Expect = 2e-55
 Identities = 186/210 (88%)
 Strand = Plus / Minus

                                                                           
Query: 374     aacaagagcccactggaggttgcgactgaagtggcaaaagaagctgatgagtacaatggc 433
               |||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| |||
Sbjct: 9425088 aacaagagcccacttgaagttgcaactgaggtggcaaaagaagctgacgagtacaacggc 9425029

                                                                           
Query: 434     ttcaaccttatactagctgatctaaccaggaatgtcatggtctacgtgtcaaaccggcca 493
               ||||||||| |||| |||||||| ||||  || |||||||| || |||||||| ||||||
Sbjct: 9425028 ttcaaccttgtactggctgatctgaccacaaacgtcatggtttatgtgtcaaatcggcca 9424969

                                                                           
Query: 494     aaggggcagcctgcgacaattcagctcgtctcaccaggactccatgtgttgtccaatgca 553
               |||||||||||||| || || || || ||||||||||| |||||||||||||||||||||
Sbjct: 9424968 aaggggcagcctgcaacgatccaacttgtctcaccagggctccatgtgttgtccaatgca 9424909

                                             
Query: 554     aggcttgatagcccttggcagaaggcaatt 583
               ||||| || |||||||||||||||| ||||
Sbjct: 9424908 aggctagacagcccttggcagaaggtaatt 9424879



 Score =  188 bits (95), Expect = 3e-44
 Identities = 170/195 (87%)
 Strand = Plus / Minus

                                                                           
Query: 177     gcaggcctacaaaggcagtaggatggtggggcgagggctcaatgaagattcttggtggca 236
               ||||||| || |||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 9425711 gcaggccaaccaaggcagtaggatggtggggggagggctcgaagaagattcttggtggta 9425652

                                                                           
Query: 237     gggatgtactcggtggaggaacatggatggggagcaccaaagatggcaggcttgccttcc 296
               | ||||| || |||||||| |||||||||||  |||| || ||||||||||| |||||||
Sbjct: 9425651 gagatgttcttggtggagggacatggatgggttgcacaaaggatggcaggctcgccttcc 9425592

                                                                           
Query: 297     tgaccaatgtgctcgagcctgatgcaatgcccggcgcacgcactaggggagacctgcccc 356
               | ||||||||||||||||| || || ||||| || || ||||| |||||||| || ||||
Sbjct: 9425591 tcaccaatgtgctcgagccggacgccatgccgggggcgcgcacaaggggagatctccccc 9425532

                              
Query: 357     tcaggttcctgcagg 371
               |||||||||||||||
Sbjct: 9425531 tcaggttcctgcagg 9425517



 Score =  186 bits (94), Expect = 1e-43
 Identities = 169/194 (87%)
 Strand = Plus / Minus

                                                                           
Query: 576     aggcaattcgccttggtaaaaacttcagggagtttataaggaagcatggtgatgatgaag 635
               |||| |||||||| ||||| ||||||||||||  | | |||||||||||||||||||| |
Sbjct: 9424395 aggcgattcgcctcggtaagaacttcagggagcatcttaggaagcatggtgatgatgagg 9424336

                                                                           
Query: 636     ttgaagcgaaggatatagctgacagactaatgactgacacgacgagggctgataaagata 695
               ||||||| ||||| |||| ||| || |||||||||||||| || | |||||| |||||||
Sbjct: 9424335 ttgaagccaaggacatagttgagaggctaatgactgacaccacaaaggctgacaaagata 9424276

                                                                           
Query: 696     ggctgccaaacaccggttgtgatcccacctgggagcacggtctgagctccatcttcatcg 755
               ||||||||||||| || |||||||| | |||||||||||| ||||||||||| ||||| |
Sbjct: 9424275 ggctgccaaacactggctgtgatccaaactgggagcacggcctgagctccattttcattg 9424216

                             
Query: 756     aggtgcaaactgac 769
               ||||||| ||||||
Sbjct: 9424215 aggtgcagactgac 9424202



 Score =  127 bits (64), Expect = 1e-25
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                           
Query: 90      ctgaagccatgtgtatcgctgcatggatttggcaggctcacccacagcatcagctcctgc 149
               |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
Sbjct: 9425939 ctgaagccatgtgtatagctgcatgggtttggcaagctcacccacagcaccagctcctcc 9425880

                                               
Query: 150     tgctgctcaacagagatgagttccatagcagg 181
               ||||||||||| | ||||||||||||||||||
Sbjct: 9425879 tgctgctcaaccgggatgagttccatagcagg 9425848



 Score =  117 bits (59), Expect = 1e-22
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                           
Query: 776     ctctatgggacaaggagcacagcagttctttcagtgaactatgatggagaagctagctta 835
               ||||| |||||| ||||||| || ||||| ||||||||||| || || ||||||||||| 
Sbjct: 9423996 ctctacgggacacggagcacggccgttctatcagtgaactacgacggtgaagctagcttg 9423937

                                                                           
Query: 836     tatgaaaagtacctcgagagtggtatatggaagaaccacacagtgcattaccagatagag 895
               || || || ||||| |||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 9423936 tacgagaaatacctggagagtggtatatggaaggatcacacggtgcattaccagatagag 9423877

                  
Query: 896     tag 898
               |||
Sbjct: 9423876 tag 9423874



to top

>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0024J13
          Length = 127614

 Score =  226 bits (114), Expect = 2e-55
 Identities = 186/210 (88%)
 Strand = Plus / Minus

                                                                          
Query: 374    aacaagagcccactggaggttgcgactgaagtggcaaaagaagctgatgagtacaatggc 433
              |||||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| |||
Sbjct: 108502 aacaagagcccacttgaagttgcaactgaggtggcaaaagaagctgacgagtacaacggc 108443

                                                                          
Query: 434    ttcaaccttatactagctgatctaaccaggaatgtcatggtctacgtgtcaaaccggcca 493
              ||||||||| |||| |||||||| ||||  || |||||||| || |||||||| ||||||
Sbjct: 108442 ttcaaccttgtactggctgatctgaccacaaacgtcatggtttatgtgtcaaatcggcca 108383

                                                                          
Query: 494    aaggggcagcctgcgacaattcagctcgtctcaccaggactccatgtgttgtccaatgca 553
              |||||||||||||| || || || || ||||||||||| |||||||||||||||||||||
Sbjct: 108382 aaggggcagcctgcaacgatccaacttgtctcaccagggctccatgtgttgtccaatgca 108323

                                            
Query: 554    aggcttgatagcccttggcagaaggcaatt 583
              ||||| || |||||||||||||||| ||||
Sbjct: 108322 aggctagacagcccttggcagaaggtaatt 108293



 Score =  188 bits (95), Expect = 3e-44
 Identities = 170/195 (87%)
 Strand = Plus / Minus

                                                                          
Query: 177    gcaggcctacaaaggcagtaggatggtggggcgagggctcaatgaagattcttggtggca 236
              ||||||| || |||||||||||||||||||| |||||||| | ||||||||||||||| |
Sbjct: 109125 gcaggccaaccaaggcagtaggatggtggggggagggctcgaagaagattcttggtggta 109066

                                                                          
Query: 237    gggatgtactcggtggaggaacatggatggggagcaccaaagatggcaggcttgccttcc 296
              | ||||| || |||||||| |||||||||||  |||| || ||||||||||| |||||||
Sbjct: 109065 gagatgttcttggtggagggacatggatgggttgcacaaaggatggcaggctcgccttcc 109006

                                                                          
Query: 297    tgaccaatgtgctcgagcctgatgcaatgcccggcgcacgcactaggggagacctgcccc 356
              | ||||||||||||||||| || || ||||| || || ||||| |||||||| || ||||
Sbjct: 109005 tcaccaatgtgctcgagccggacgccatgccgggggcgcgcacaaggggagatctccccc 108946

                             
Query: 357    tcaggttcctgcagg 371
              |||||||||||||||
Sbjct: 108945 tcaggttcctgcagg 108931



 Score =  186 bits (94), Expect = 1e-43
 Identities = 169/194 (87%)
 Strand = Plus / Minus

                                                                          
Query: 576    aggcaattcgccttggtaaaaacttcagggagtttataaggaagcatggtgatgatgaag 635
              |||| |||||||| ||||| ||||||||||||  | | |||||||||||||||||||| |
Sbjct: 107809 aggcgattcgcctcggtaagaacttcagggagcatcttaggaagcatggtgatgatgagg 107750

                                                                          
Query: 636    ttgaagcgaaggatatagctgacagactaatgactgacacgacgagggctgataaagata 695
              ||||||| ||||| |||| ||| || |||||||||||||| || | |||||| |||||||
Sbjct: 107749 ttgaagccaaggacatagttgagaggctaatgactgacaccacaaaggctgacaaagata 107690

                                                                          
Query: 696    ggctgccaaacaccggttgtgatcccacctgggagcacggtctgagctccatcttcatcg 755
              ||||||||||||| || |||||||| | |||||||||||| ||||||||||| ||||| |
Sbjct: 107689 ggctgccaaacactggctgtgatccaaactgggagcacggcctgagctccattttcattg 107630

                            
Query: 756    aggtgcaaactgac 769
              ||||||| ||||||
Sbjct: 107629 aggtgcagactgac 107616



 Score =  127 bits (64), Expect = 1e-25
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                          
Query: 90     ctgaagccatgtgtatcgctgcatggatttggcaggctcacccacagcatcagctcctgc 149
              |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| |
Sbjct: 109353 ctgaagccatgtgtatagctgcatgggtttggcaagctcacccacagcaccagctcctcc 109294

                                              
Query: 150    tgctgctcaacagagatgagttccatagcagg 181
              ||||||||||| | ||||||||||||||||||
Sbjct: 109293 tgctgctcaaccgggatgagttccatagcagg 109262



 Score =  117 bits (59), Expect = 1e-22
 Identities = 107/123 (86%)
 Strand = Plus / Minus

                                                                          
Query: 776    ctctatgggacaaggagcacagcagttctttcagtgaactatgatggagaagctagctta 835
              ||||| |||||| ||||||| || ||||| ||||||||||| || || ||||||||||| 
Sbjct: 107410 ctctacgggacacggagcacggccgttctatcagtgaactacgacggtgaagctagcttg 107351

                                                                          
Query: 836    tatgaaaagtacctcgagagtggtatatggaagaaccacacagtgcattaccagatagag 895
              || || || ||||| |||||||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 107350 tacgagaaatacctggagagtggtatatggaaggatcacacggtgcattaccagatagag 107291

                 
Query: 896    tag 898
              |||
Sbjct: 107290 tag 107288



to top

>dbj|AB108267.1| Phleum pratense DNA, SSR, microsatellite A16-A08
          Length = 534

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 183 ctacaaaggcagtaggatggtgg 205
           |||||||||||||||||||||||
Sbjct: 147 ctacaaaggcagtaggatggtgg 169



 Score = 42.1 bits (21), Expect = 5.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 237 gggatgtactcggtggaggaacatggatggggagcaccaaagatg 281
           ||||||| || ||||||||||||||||  | ||||||||| ||||
Sbjct: 224 gggatgtgcttggtggaggaacatggaatgtgagcaccaacgatg 268



to top

>emb|BX511019.6| Zebrafish DNA sequence from clone CH211-89O9 in linkage group 1,
             complete sequence
          Length = 180744

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 922   gcccaaaataggaagaaagaatg 944
             |||||||||||||||||||||||
Sbjct: 73790 gcccaaaataggaagaaagaatg 73812



to top

>ref|NM_124968.1| Arabidopsis thaliana unknown protein (AT5G55860) mRNA, complete cds
          Length = 1950

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 627  atgatgaagttgaagcgaagga 648
            ||||||||||||||||||||||
Sbjct: 1028 atgatgaagttgaagcgaagga 1049



to top

>gb|AY735732.1| Arabidopsis thaliana hypothetical protein AT5G55860 mRNA, complete
            cds
          Length = 2498

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 627  atgatgaagttgaagcgaagga 648
            ||||||||||||||||||||||
Sbjct: 1320 atgatgaagttgaagcgaagga 1341



to top

>gb|DQ056724.1| Arabidopsis thaliana hypothetical protein (At5g55860) mRNA, complete
            cds
          Length = 1950

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 627  atgatgaagttgaagcgaagga 648
            ||||||||||||||||||||||
Sbjct: 1028 atgatgaagttgaagcgaagga 1049



to top

>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3
          Length = 42356

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 627   atgatgaagttgaagcgaagga 648
             ||||||||||||||||||||||
Sbjct: 16127 atgatgaagttgaagcgaagga 16148



to top

>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 126      ctcacccacagcatcagctcc 146
                |||||||||||||||||||||
Sbjct: 12416023 ctcacccacagcatcagctcc 12416003



to top

>ref|XM_001054775.1| PREDICTED: Rattus norvegicus similar to bone morphogenetic protein 8b
            (LOC679119), mRNA
          Length = 1676

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 807  cagtgaactatgatggagaag 827
            |||||||||||||||||||||
Sbjct: 1621 cagtgaactatgatggagaag 1641



to top

>ref|XM_657725.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5213.2), mRNA
          Length = 981

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 137 catcagctcctgctgctgctc 157
           |||||||||||||||||||||
Sbjct: 774 catcagctcctgctgctgctc 794



to top

>gb|AC112153.4| Mus musculus BAC clone RP24-93G11 from chromosome 19, complete sequence
          Length = 180944

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 926    aaaataggaagaaagaatgaa 946
              |||||||||||||||||||||
Sbjct: 100216 aaaataggaagaaagaatgaa 100236



to top

>gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, complete sequence
          Length = 228400

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   tgctgctgctcaacagagatg 167
             |||||||||||||||||||||
Sbjct: 59353 tgctgctgctcaacagagatg 59373



to top

>ref|NM_079317.2| Drosophila melanogaster twin of eyg CG10704-RA (toe), mRNA
          Length = 2402

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 126  ctcacccacagcatcagctcc 146
            |||||||||||||||||||||
Sbjct: 1987 ctcacccacagcatcagctcc 2007



to top

>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 365    ctgcagggaaacaagagccca 385
              |||||||||||||||||||||
Sbjct: 124824 ctgcagggaaacaagagccca 124804



to top

>gb|AC125618.1| Homo sapiens 3 BAC RP11-510K16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 58110

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 863   tggaagaaccacacagtgcattacc 887
             ||||||||||| |||||||||||||
Sbjct: 42399 tggaagaaccatacagtgcattacc 42423



to top

>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 126    ctcacccacagcatcagctcc 146
              |||||||||||||||||||||
Sbjct: 100805 ctcacccacagcatcagctcc 100785



to top

>gb|AC087710.8| Homo sapiens chromosome 8, clone RP11-11A18, complete sequence
          Length = 167139

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 927   aaataggaagaaagaatgaat 947
             |||||||||||||||||||||
Sbjct: 31976 aaataggaagaaagaatgaat 31996



to top

>gb|AC006161.3| Arabidopsis thaliana chromosome 2 clone T14A4 map mi310, complete
             sequence
          Length = 99761

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 621   atggtgatgatgaagttgaag 641
             |||||||||||||||||||||
Sbjct: 86875 atggtgatgatgaagttgaag 86895



to top

>gb|AY069177.1| Drosophila melanogaster GH22493 full length cDNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 126  ctcacccacagcatcagctcc 146
            |||||||||||||||||||||
Sbjct: 1987 ctcacccacagcatcagctcc 2007



to top

>gb|AC024996.6| Homo sapiens chromosome 8, clone RP11-697C18, complete sequence
          Length = 177864

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 927   aaataggaagaaagaatgaat 947
             |||||||||||||||||||||
Sbjct: 48986 aaataggaagaaagaatgaat 48966



to top

>emb|AL139247.12| Human DNA sequence from clone RP1-52J10 on chromosome 1 Contains the
            SPRL3A gene for small proline rich-like (epidermal
            differentiation complex) 3A, the LEP14 gene for late
            envelope protein 14, the LEP13 gene for late envelope
            protein 13, a small proline rich-like (epidermal
            differentiation complex) 1B (SPRL1B) pseudogene, a novel
            gene, the SPRL1A gene for small proline rich-like
            (epidermal differentiation complex) 1A, the LEP11 gene
            for late envelope protein 11 and the SPRL1B gene for
            small proline rich-like (epidermal differentiation
            complex) 1B, complete sequence
          Length = 117084

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1018 gattaaattatttactgtatg 1038
            |||||||||||||||||||||
Sbjct: 4615 gattaaattatttactgtatg 4595



to top

>gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, complete sequence
          Length = 163998

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 872    cacacagtgcattaccagata 892
              |||||||||||||||||||||
Sbjct: 127442 cacacagtgcattaccagata 127422



to top

>emb|AJ508355.1|BMA508355 Brugia malayi ORF1, ORF2, ORF3 and ORF4 DNA and alt-1 gene
          Length = 32442

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1019  attaaattatttactgtatgc 1039
             |||||||||||||||||||||
Sbjct: 21810 attaaattatttactgtatgc 21830



to top

>gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 190789

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 926   aaaataggaagaaagaatgaa 946
             |||||||||||||||||||||
Sbjct: 59423 aaaataggaagaaagaatgaa 59443



to top

>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence
          Length = 163976

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 872    cacacagtgcattaccagata 892
              |||||||||||||||||||||
Sbjct: 149821 cacacagtgcattaccagata 149841



to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 114     ggatttggcaggctcacccacagca 138
               ||||||||||||| |||||||||||
Sbjct: 4298897 ggatttggcaggcccacccacagca 4298873



to top

>dbj|BS000073.1| Pan troglodytes chromosome 22 clone:RP43-040P11, map 22, complete
             sequences
          Length = 148593

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1275  tataaagaaaaagctctgtgc 1295
             |||||||||||||||||||||
Sbjct: 92649 tataaagaaaaagctctgtgc 92669



to top

>emb|AJ871176.1| Bos taurus ABCG2 gene, PKD2 gene and SPP1 gene, clone RPCI42_5K14
          Length = 171712

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 65    ttagaagcagggagtaaggaaccac 89
             |||||||||||||| ||||||||||
Sbjct: 56136 ttagaagcagggagaaaggaaccac 56160



to top

>gb|AC138621.4| Mus musculus BAC clone RP23-273E16 from 6, complete sequence
          Length = 225376

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   tgctgctgctcaacagagatg 167
             |||||||||||||||||||||
Sbjct: 42861 tgctgctgctcaacagagatg 42841



to top

>emb|AL713968.9| Mouse DNA sequence from clone RP23-387L21 on chromosome X, complete
             sequence
          Length = 100240

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 945   aatagctacaattgtgcatgctgttattt 973
             |||||||| |||||| |||||||||||||
Sbjct: 13321 aatagctaaaattgtacatgctgttattt 13349


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 237,475,786
Number of extensions: 13125095
Number of successful extensions: 284413
Number of sequences better than 10.0: 37
Number of HSP's gapped: 284410
Number of HSP's successfully gapped: 49
Length of query: 1326
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1303
Effective length of database: 18,503,978,556
Effective search space: 24110684058468
Effective search space used: 24110684058468
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top