ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73e14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073696:Os12g0290600 414 e-116
2AK064188:Os12g0485300 36 0.067
3AK070973:Os07g0164800 32 0.96
4AY644645:Os08g0192900 32 1.3
5AK103422:Os08g0192900 32 1.3
6AK120856:Os07g0645700 30 4.8
7AK101403:Os09g0520700 29 6.3

>AK073696:Os12g0290600 |
          Length = 336
 Score =  414 bits (1064), Expect = e-116
 Identities = 212/259 (81%), Positives = 226/259 (87%)
 Frame = +1

Query: 163 KAKELDQLRKEQDDVASEINKIHKKIISSPEMVDKSVDAMMARLRGFYVQARXXXXXXXX 342
           KAKELDQLRKEQD+V +EINK+HKKI+SSPEMVDK VDA + RLR  Y +A+        
Sbjct: 81  KAKELDQLRKEQDEVVTEINKMHKKILSSPEMVDKQVDATLIRLRALYTRAKELCESEVS 140

Query: 343 XXXXXVGLLDGLLQSGVSAAPRKKIEISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLK 522
                VGLLDGLLQSG SAA RKKIE+ EQKKKRMKSDTDTTRFSSASMRSQLDQA NLK
Sbjct: 141 ASSALVGLLDGLLQSGTSAAQRKKIEVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLK 200

Query: 523 GEQVAARVKSDDEKDEWFVVKVIHFDKETKEFEVLDEEPGDDEESAQKFERKYKLPMSYI 702
           GEQVAA+VKSD+EKDEWFVVKVIHFDKETKE+EVLDEEPGDDEESAQK   KYKLPMS I
Sbjct: 201 GEQVAAKVKSDEEKDEWFVVKVIHFDKETKEYEVLDEEPGDDEESAQK---KYKLPMSDI 257

Query: 703 IPFPKKGDPSSAQDFGQGRLVLAVYPGTTALYRATVASHRKRKSDDYNLLFDDDEEDGNL 882
           IPFPK+GDPSSA DFGQGR VLAVYP TTALYRATVAS+RKRKSDDY LLFDDDEEDGNL
Sbjct: 258 IPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRATVASNRKRKSDDYLLLFDDDEEDGNL 317

Query: 883 PERAVPFYRVVALPEGHRQ 939
           P+RAVPFYRVV LPEGHRQ
Sbjct: 318 PQRAVPFYRVVPLPEGHRQ 336



to top

>AK064188:Os12g0485300 |
          Length = 101

 Score = 35.8 bits (81), Expect = 0.067
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = -3

Query: 1027 DYRIIRLENC-HLRTLYHLLVQGRCPPRFFIADGPLGAQPLCKMEQLSLVDSH--PLRHH 857
            +Y+  RL  C H RTL H L     PP    +  P+ +  +CK+ + + ++ H   +R  
Sbjct: 8    NYQEQRLIVCLHHRTLVHPLALDPLPPPLIASHPPVASTSICKITRCTCLNHHRRHIRAE 67

Query: 856  QIRDCNH 836
             +R C+H
Sbjct: 68   SVRQCHH 74



to top

>AK070973:Os07g0164800 |
          Length = 275

 Score = 32.0 bits (71), Expect = 0.96
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
 Frame = +1

Query: 406 RKKIEISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLK---GEQVAARVKSDDEKDEWF 576
           +++I +  + K +   D D  +     +++++     +K    +   + VKS D K    
Sbjct: 25  KEEIHLKIKSKDKSSGDEDEKKEIEIEVKAKIVDKEEVKLDSDDGAKSAVKSKDSKK--- 81

Query: 577 VVKVIHFDKETKEFEVLDEEPGDDEESAQKFERKYKLPMSYIIPFPKKGDPSSAQDFGQ 753
                  DKE K+ +  D+E  D++E  +K E++ K          KK D S  ++ G+
Sbjct: 82  -------DKENKKSDKKDDEHDDEDEEGKKKEKEMK---------EKKKDKSDKKEEGK 124



to top

>AY644645:Os08g0192900 |
          Length = 572

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +1

Query: 397 AAPRKKIEISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLKGEQVAARVKSDDEKD 567
           AAP KK  ++ QKK   K D+D++   S S  S  D+    K +  A   K+DD  D
Sbjct: 159 AAPVKKTSVTAQKK---KDDSDSS--ESESDESDSDEDVPTKSKAPAVAAKNDDSTD 210



to top

>AK103422:Os08g0192900 |
          Length = 572

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +1

Query: 397 AAPRKKIEISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLKGEQVAARVKSDDEKD 567
           AAP KK  ++ QKK   K D+D++   S S  S  D+    K +  A   K+DD  D
Sbjct: 159 AAPVKKTSVTAQKK---KDDSDSS--ESESDESDSDEDVPTKSKAPAVAAKNDDSTD 210



to top

>AK120856:Os07g0645700 |
          Length = 848

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -3

Query: 925 LGAQPLCKMEQ-LSLVDSHPLRHHQIRD---CNHQISSYDERLRWPYIVLLCQDKQLRLA 758
           LG QP CKMEQ LS    HP   HQ+ D       +S  D+R+  P ++    +K+ +  
Sbjct: 4   LGRQP-CKMEQELSWEGFHPSIAHQLLDGMPSQPGMSKEDQRISEPVLINTTMNKEEKWL 62

Query: 757 D 755
           D
Sbjct: 63  D 63



to top

>AK101403:Os09g0520700 |
          Length = 696

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 22/85 (25%), Positives = 40/85 (47%)
 Frame = +1

Query: 391 VSAAPRKKIEISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLKGEQVAARVKSDDEKDE 570
           V A+ RKK    E+K+K+ K+   +   SS+S   +    ++ +    A + K +  K++
Sbjct: 33  VEASSRKK----EKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEK 88

Query: 571 WFVVKVIHFDKETKEFEVLDEEPGD 645
             V +    D E +     DE+P D
Sbjct: 89  VVVEEEEEDDDEGELTASGDEDPAD 113


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 33,668,983
Number of extensions: 723742
Number of successful extensions: 1913
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1909
Number of HSP's successfully gapped: 7
Length of query: 424
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 321
Effective length of database: 11,275,632
Effective search space: 3619477872
Effective search space used: 3619477872
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top