ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73e14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein 107 e-107
2LOC_Os11g22680:12011.t01938:unspliced-genomic retrotransposo... 31 0.99
3LOC_Os01g51650:12001.t04596:unspliced-genomic retrotransposo... 34 2.2
4LOC_Os04g25400:12004.t02249:unspliced-genomic coenzyme F420 ... 25 2.8
5LOC_Os12g26370:12012.t02351:unspliced-genomic retrotransposo... 34 3.0
6LOC_Os03g34300:12003.t03018:unspliced-genomic serine incorpo... 33 4.2
7LOC_Os11g38780:12011.t03420:unspliced-genomic calcium ion bi... 33 4.2
8LOC_Os11g29970:12011.t02601:unspliced-genomic NB-ARC domain ... 33 4.2
9LOC_Os06g34060:12006.t03102:unspliced-genomic expressed protein 33 4.2
10LOC_Os01g57780:12001.t05180:unspliced-genomic retrotransposo... 26 5.3
11LOC_Os04g10320:12004.t00865:unspliced-genomic hypothetical p... 25 5.4
12LOC_Os10g09740:12010.t00787:unspliced-genomic hypothetical p... 33 5.7
13LOC_Os09g27160:12009.t02395:unspliced-genomic expressed protein 33 5.7
14LOC_Os04g20960:12004.t005550:unspliced-genomic expressed pro... 33 5.7
15LOC_Os03g61270:12003.t05360:unspliced-genomic 1,4-beta-D-man... 33 5.7
16LOC_Os01g72940:12001.t06579:unspliced-genomic phosphatidylse... 33 5.7
17LOC_Os11g29274:12011.t02533:unspliced-genomic conserved hypo... 30 7.2
18LOC_Os07g24140:12007.t02111:unspliced-genomic hypothetical p... 26 7.6
19LOC_Os09g20380:12009.t01772:unspliced-genomic transposon pro... 32 7.8
20LOC_Os01g67000:12001.t06058:unspliced-genomic membrane-assoc... 27 9.3

>LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein|
          Length = 14375
 Score =  107 bits (228), Expect(9) = e-107
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +1 / +2

                                                                
Query: 673   RKYKLPMSYIIPFPKKGDPSSAQDFGQGRLVLAVYPGTTALYRATVASHRK 825
             RKYKLPMS IIPFPK+GDPSSA DFGQGR VLAVYP TTALYRATVAS+RK
Sbjct: 10424 RKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRATVASNRK 10576



 Score = 85.4 bits (180), Expect(9) = e-107
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = +1 / +1

                                                    
Query: 418  EISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLKGEQVA 537
            E+ EQKKKRMKSDTDTTRFSSASMRSQLDQA NLKGEQV+
Sbjct: 5830 EVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVS 5949



 Score = 83.5 bits (176), Expect(9) = e-107
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +1 / +2

                                                    
Query: 841   YNLLFDDDEEDGNLPERAVPFYRVVALPEGHRQ*KTSVD 957
             Y LLFDDDEEDGNLP+RAVPFYRVV LPEGHRQ*K+ +D
Sbjct: 13874 YLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ*KSQLD 13990



 Score = 70.3 bits (147), Expect(9) = e-107
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +1 / +3

                                          
Query: 529  QVAARVKSDDEKDEWFVVKVIHFDKETKEF 618
            QVAA+VKSD+EKDEWFVVKVIHFDKETKE+
Sbjct: 7176 QVAAKVKSDEEKDEWFVVKVIHFDKETKEY 7265



 Score = 67.5 bits (141), Expect(9) = e-107
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3 / +3

                                       
Query: 339  QCFICFGWTIRWFVAIWSFSCTKKKDR 419
            QC +CFGWTI WFVAIW+FSCT KKDR
Sbjct: 5664 QCIVCFGWTIGWFVAIWNFSCTTKKDR 5744



 Score = 57.9 bits (120), Expect(9) = e-107
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +1 / +1

                                       
Query: 163 KAKELDQLRKEQDDVASEINKIHKKIIS 246
           KAKELDQLRKEQD+V +EINK+HKKI+S
Sbjct: 283 KAKELDQLRKEQDEVVTEINKMHKKILS 366



 Score = 41.4 bits (84), Expect(9) = e-107
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1 / +2

                                             
Query: 220  NKIHKKIISSPEMVDKSVDAMMARLRGFYVQAR 318
            N +H     +PEMVDK VDA + RLR  Y +A+
Sbjct: 3257 NSLHLVCFVAPEMVDKQVDATLIRLRALYTRAK 3355



 Score = 33.1 bits (66), Expect(9) = e-107
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2 / +2

                            
Query: 137 EGTSLAFWTRPRSWTSC 187
           E T  A W RPRSWTSC
Sbjct: 257 ERTLRACWIRPRSWTSC 307



 Score = 31.8 bits (63), Expect(9) = e-107
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2 / +3

                                
Query: 614  NLKYWMRSLVMMKRAPKSLR 673
            +++Y MRS V MKR PKS+R
Sbjct: 8286 DMRYLMRSQVTMKRVPKSMR 8345



 Score =  100 bits (213), Expect(7) = 5e-65
 Identities = 45/54 (83%), Positives = 46/54 (85%)
 Frame = -2 / -3

                                                                   
Query: 833   DFLLR*EATVALYSAVVPG*TAKTSRPCPKS*ALDGSPFFGNGIIYDIGNLYFL 672
             D  LR EATVALYSAVV G*TAKT RPCPKS AL+GSP FGNGII DIGNLYFL
Sbjct: 10584 DVTLRLEATVALYSAVVLG*TAKTCRPCPKSGALEGSPLFGNGIISDIGNLYFL 10423



 Score = 74.4 bits (156), Expect(7) = 5e-65
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -1 / -3

                                                   
Query: 534  NLLSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFTDF 418
            NL SF+VCSLVKLAPHRCR +SC I I LHPLLFL T+F
Sbjct: 5946 NLFSFQVCSLVKLAPHRCRGESCSICIRLHPLLFLLTNF 5830



 Score = 57.0 bits (118), Expect(7) = 5e-65
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = -2 / -3

                                     
Query: 944   FHCRWPSGSATTL*NGTALSGRFP 873
             FHCRWPSG  TTL*NGTAL GRFP
Sbjct: 13977 FHCRWPSGRGTTL*NGTALCGRFP 13906



 Score = 50.1 bits (103), Expect(7) = 5e-65
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -1 / -1

                                        
Query: 612  FCFLIEMYDLHHKPLVFFIIRLYPRCNL 529
            FCFLIEMY LHHKP +FF +     CNL
Sbjct: 7259 FCFLIEMYHLHHKPFIFFFV*FDLSCNL 7176



 Score = 46.0 bits (94), Expect(7) = 5e-65
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2 / -1

                              
Query: 401  AAETPDCNKPSNSPTKAD 348
            AAE PDCNKPSNSPTKAD
Sbjct: 5726 AAEVPDCNKPSNSPTKAD 5673



 Score = 34.5 bits (69), Expect(7) = 5e-65
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = -3 / -1

                                   
Query: 673  SQTFGRSLHHHQAPHPVLQILLF 605
            S TFG SLH H APH V  I  F
Sbjct: 8345 SHTFGHSLHRHLAPHQVPHICKF 8277



 Score = 29.0 bits (57), Expect(7) = 5e-65
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3 / -1

                                          
Query: 340  *FHSQRVLLLAHKIHEA*PSWHQLIYPPSL 251
            * HS +VL   +  HEA  + HQ +Y PSL
Sbjct: 3377 *LHSHKVLWHVYIKHEAEST*HQPVYQPSL 3288



 Score = 75.3 bits (158), Expect(7) = 3e-52
 Identities = 38/58 (65%), Positives = 40/58 (68%)
 Frame = +3 / +1

                                                                       
Query: 660   PKV*EEVQVTYVIYYSISKERRSV*CSGFWTGSASLSCLSWHNSTI*GHRSLSS*EEI 833
             P +* EVQV YV YYSISKER S  C  FW GS SLSCLS HNSTI* +  L S*  I
Sbjct: 10411 PLL**EVQVAYVRYYSISKERGSFQCPRFWAGSTSLSCLS*HNSTI*SYCCL*S*GNI 10584



 Score = 60.2 bits (125), Expect(7) = 3e-52
 Identities = 27/39 (69%), Positives = 28/39 (71%)
 Frame = +3 / +3

                                                   
Query: 417  RNQ*TEKEEDEVRYGYNKIFFCIYEEPT*PSCKP*RRAG 533
            R+ * EKEEDEV Y Y  I  CIYEEPT*PS KP RR G
Sbjct: 5829 RSW*AEKEEDEV*YRYYTILLCIYEEPT*PSYKPERRTG 5945



 Score = 54.7 bits (113), Expect(7) = 3e-52
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +2 / +2

                                            
Query: 338  SVLHLLWLDY*MVCCNLEFQLHQEKR*KSVNR 433
            +V  LLWLDY MVCCNLE QLH EKR* S  +
Sbjct: 5663 AVHRLLWLDYWMVCCNLELQLHNEKR*VSTRK 5758



 Score = 48.3 bits (99), Expect(7) = 3e-52
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +3 / +1

                                                
Query: 840   LQSLI***RRGWESTRESCSILQSGCAPRGPSAMK 944
             L +L+***R GW+ST +SC++L SG +P GP A+K
Sbjct: 13873 LSTLV***RGGWKSTTKSCAVL*SGSSPGGPPAVK 13977



 Score = 46.0 bits (94), Expect(7) = 3e-52
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +3 / +2

                                          
Query: 528  AGCSEGKVG**KRRVVCGEGHTFR*GNKRI 617
            +GCS G++   KR +VCGEG TFR*GNKR+
Sbjct: 7175 SGCS*GQIRRRKR*MVCGEGDTFR*GNKRV 7264



 Score = 36.8 bits (74), Expect(7) = 3e-52
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1 / +1

                                    
Query: 163  KAKELDQLRKEQDDVASEINKIHK 234
            K   LDQL+K+QD +  +IN+IHK
Sbjct: 2245 KLNHLDQLQKDQDSITEKINEIHK 2316



 Score = 25.8 bits (50), Expect(7) = 3e-52
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3 / +1

                                          
Query: 252  RDGG*IS*CHDG*ASWILCASKRTL*E*NQ 341
            RDG *  *C+   AS  +   +RTL*E*+Q
Sbjct: 3289 RDG**TG*CYVDSASCFIYTCQRTL*E*SQ 3378



 Score = 79.0 bits (166), Expect(6) = 1e-44
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -1 / -2

                                                                
Query: 840   IIRFPLTMRGYGGPI*CCCARINS*D*PTLSKILSTRRISFLWKWNNI*HR 688
             I+R  LT+RG    I*CCCARINS*D  TL KI  T RI  LWKWNNI*HR
Sbjct: 10591 ILRCYLTIRGNSSSI*CCCARINS*DLSTLPKIWGTGRIPSLWKWNNI*HR 10439



 Score = 58.8 bits (122), Expect(6) = 1e-44
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = -2 / -1

                                      
Query: 533  TCSPLRFAAWSSWLLIDAEENLVVSV 456
            TCSP RF AWSSWLLIDAEEN VVSV
Sbjct: 5945 TCSPFRFVAWSSWLLIDAEENRVVSV 5868



 Score = 53.3 bits (110), Expect(6) = 1e-44
 Identities = 24/33 (72%), Positives = 28/33 (84%)
 Frame = -1 / -2

                                              
Query: 945   FSLPMALWERNHSVKWNSSLW*IPILFVIIK*E 847
             FSLP+AL ERNHS++ +SSLW*I IL VIIK E
Sbjct: 13978 FSLPVALRERNHSIERHSSLW*ISILLVIIKQE 13880



 Score = 42.8 bits (87), Expect(6) = 1e-44
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -1 / -3

                                   
Query: 417  YLFSWCS*NSRLQQTI**SNQSR 349
            YLFS CS*+SRLQQTI *SNQSR
Sbjct: 5742 YLFSLCS*SSRLQQTIQ*SNQSR 5674



 Score = 37.7 bits (76), Expect(6) = 1e-44
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = -3 / -3

                              
Query: 613  LLFPYRNV*PSPQTTRLF 560
            LLFPYRNV PSPQT  LF
Sbjct: 7260 LLFPYRNVSPSPQTIHLF 7207



 Score = 28.6 bits (56), Expect(6) = 1e-44
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1 / -2

                                      
Query: 339  DFTLREFSCLHIKSTKPSHHGIN*FI 262
            DFTL +F    I STKP+   IN FI
Sbjct: 3376 DFTLTKFFGTCI*STKPNQRSINLFI 3299



 Score = 73.0 bits (153), Expect(6) = 5e-42
 Identities = 39/61 (63%), Positives = 43/61 (70%)
 Frame = +2 / +3

                                                                         
Query: 659   PKSLRGSTSYLCHILFHFQRKEIRLVLRILDRVG*S*LFILAQQHYIGPP*PLIVRGNLM 838
             P  + GSTS LC ILFHFQR+ I  V +IL RV  S*LFILAQQHYI    PLIVR +L 
Sbjct: 10410 PPFVIGSTSCLCQILFHFQREGILPVPQILGRVDKS*LFILAQQHYIELLLPLIVR*HLK 10589

              
Query: 839   I 841
             I
Sbjct: 10590 I 10592



 Score = 58.8 bits (122), Expect(6) = 5e-42
 Identities = 29/40 (72%), Positives = 32/40 (80%)
 Frame = +2 / +2

                                                    
Query: 419  KSVNRKRRG*SPIRIQQDFLLHL*GANLTKLQTLKESRLQ 538
            K V+RKRRG*S I+I  D  LHL*GANLTKLQT KE+R Q
Sbjct: 5831 KLVSRKRRG*SLIQILHDSPLHL*GANLTKLQT*KENRFQ 5950



 Score = 47.8 bits (98), Expect(6) = 5e-42
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +2 / +3

                                                      
Query: 833   LMITISYLMMTKRMGIYQRELFHFTEWLRSQRAIGNEKPRW 955
             L +  S LMMT+RM IY +EL    EW  S+RA G+E   W
Sbjct: 13866 LAVIYSCLMMTRRMEIYHKELCRSIEWFLSRRATGSENLSW 13988



 Score = 43.2 bits (88), Expect(6) = 5e-42
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +2 / +1

                                            
Query: 530  RLQRG*SRMMKKTSGLW*RSYISIRKQKNLKY 625
            RLQ   ++  KK +GLW*R YISIRKQK++ Y
Sbjct: 7177 RLQLRSNQTKKKMNGLW*R*YISIRKQKSMSY 7272



 Score = 40.9 bits (83), Expect(6) = 5e-42
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +1 / +1

                                
Query: 358  VGLLDGLLQSGVSAAPRKKI 417
            VGLLDGLLQSG SAA RKKI
Sbjct: 5683 VGLLDGLLQSGTSAAQRKKI 5742



 Score = 27.2 bits (53), Expect(6) = 5e-42
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +3 / +3

                           
Query: 201 RCGLRDQQDPQEDHLL 248
           R G RDQQD QED LL
Sbjct: 321 RGGHRDQQDAQEDPLL 368



 Score = 73.9 bits (155), Expect(3) = 1e-23
 Identities = 36/56 (64%), Positives = 39/56 (69%)
 Frame = -3 / -1

                                                                     
Query: 823   YDERLRWPYIVLLCQDKQLRLADPVQNPEH*TDLLSLEME*YMT*VTCTSSQTFGR 656
             YD R +  YIVLLC DKQLRL DP QN  H  D LSLEME*Y+T* TCTS    G+
Sbjct: 10574 YD*RQQ*LYIVLLC*DKQLRLVDPAQNLGHWKDPLSLEME*YLT*ATCTSYYKRGK 10407



 Score = 48.7 bits (100), Expect(3) = 1e-23
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = -3 / -1

                                                      
Query: 955   PPRFFIADGPLGAQPLCKMEQLSLVDSHPLRHHQIRDCNHQ 833
             P   F A GP G +PL +  QL +VD HP RHHQ R  N Q
Sbjct: 13988 PTEIFTAGGPPGEEPLYRTAQLFVVDFHPPRHHQTRVDNCQ 13866



 Score = 39.1 bits (79), Expect(3) = 1e-23
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -3 / -2

                                
Query: 400  QLKLQIATNHLIVQPKQMKH 341
            QLK QIATNH IVQPKQ  H
Sbjct: 5725 QLKFQIATNHPIVQPKQTMH 5666



 Score = 46.9 bits (96), Expect = 3e-04
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1 / +2

                                            
Query: 616  FEVLDEEPGDDEESAQKFERKYKLPMSYIIPF 711
            +EVLDEEPGDDEESAQK+E    L   +++ F
Sbjct: 8288 YEVLDEEPGDDEESAQKYEISPGLSFWFLVCF 8383



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>LOC_Os11g22680:12011.t01938:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4106

 Score = 31.3 bits (62), Expect(2) = 0.99
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = +2 / -3

                                                      
Query: 1052 WRSSYYSTTIVCIYIES*SWLACHVCTYISS*EL*WKLIEGC 1177
            W+  +Y   I+ +Y+    W+ CH+ + ++   + + L + C
Sbjct: 2238 WQIRFYPCKIIIMYLICAMWITCHLLSKMNKSMICYSLAQSC 2113



 Score = 26.7 bits (52), Expect(2) = 0.99
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = +3 / -1

                                        
Query: 888  ESCSILQSGCAPRGPSAMKNLGGHLPCT 971
            E C     G AP GP +   L  H P T
Sbjct: 3878 EGCRPSVCGAAPLGPGSQTKLQAHRPIT 3795



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>LOC_Os01g51650:12001.t04596:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6719

 Score = 34.1 bits (68), Expect = 2.2
 Identities = 13/39 (33%), Positives = 26/39 (66%)
 Frame = +3 / -2

                                                   
Query: 999  QFSSLMMR*SYFTCSPLDGAVHIILLPLYVYISRVRVGL 1115
            QFSS+ +  +  T SP+   VH+ ++P   +I+R+++G+
Sbjct: 475  QFSSISISKNVPTSSPIAFPVHLFIIPQGNFITRIQIGI 359



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>LOC_Os04g25400:12004.t02249:unspliced-genomic coenzyme F420 hydrogenase/dehydrogenase beta subunit, putative,|
            expressed
          Length = 5424

 Score = 25.4 bits (49), Expect(2) = 2.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1 / -3

                                 
Query: 1033 LPAAH*MAQFILFYYHCMYIY 1095
            +P +H  +  ++  +HC+YIY
Sbjct: 862  IPPSHLNSTIVI*NHHCLYIY 800



 Score = 25.4 bits (49), Expect(2) = 2.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2 / -1

                                  
Query: 1073 TTIVCIYIES*SWLACHVCTYI 1138
            TT VCIY+  *S L    C YI
Sbjct: 822  TTTVCIYMML*SNLLSSSCCYI 757



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>LOC_Os12g26370:12012.t02351:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 2185

 Score = 33.6 bits (67), Expect = 3.0
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2 / +3

                                  
Query: 32   APSVRPQVDWALPSDPSRVCRP 97
            AP  R +V WALPS P  +CRP
Sbjct: 1029 APWQRCRVAWALPSSPHGLCRP 1094



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>LOC_Os03g34300:12003.t03018:unspliced-genomic serine incorporator 3, putative, expressed|
          Length = 7078

 Score = 33.1 bits (66), Expect = 4.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3 / +1

                                  
Query: 850 RDCNHQISSYDERLRWPYIVLLC 782
           R C H I+ Y  +LR+P+++++C
Sbjct: 607 RSCQHVITFYKLKLRYPHVIVIC 675



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>LOC_Os11g38780:12011.t03420:unspliced-genomic calcium ion binding protein, putative|
          Length = 576

 Score = 33.1 bits (66), Expect = 4.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1 / -1

                                                  
Query: 540 RCNLLSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFT 424
           R NLL     S++K+ PH C  +       L+P++F+ T
Sbjct: 321 RTNLLVNHSFSVIKIRPHLCHHRLNIFMCHLYPIIFMLT 205



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>LOC_Os11g29970:12011.t02601:unspliced-genomic NB-ARC domain containing protein, expressed|
          Length = 5534

 Score = 33.1 bits (66), Expect = 4.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1 / +2

                                                                  
Query: 564  FFIIRLYPRCNLLSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFTDFYLFSW 403
            F+I  +  +  ++ F   S + +    CR+ S  I + L PL+FLF   +  SW
Sbjct: 1712 FYIYPMPSKFLIIKFANISYIPILAAACRKSSSYI*LSLFPLVFLFG*CFHESW 1873



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>LOC_Os06g34060:12006.t03102:unspliced-genomic expressed protein|
          Length = 3342

 Score = 33.1 bits (66), Expect = 4.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1 / -1

                                             
Query: 1066 LFYYHCMYIYRELELACMPCMHIYLELRVVMEV 1164
            ++ Y CMYIY  + +    CM+IY+ + + M V
Sbjct: 2649 IYIYVCMYIYIYIYIYIYICMYIYIYIYICMYV 2551



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>LOC_Os01g57780:12001.t05180:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3218

 Score = 26.3 bits (51), Expect(2) = 5.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1 / -1

                                 
Query: 820  RKRKSDDYNLLFDDDEEDGNL 882
            R R SDD +   DDD++DG+L
Sbjct: 1517 RGRLSDDVDEDDDDDDDDGSL 1455



 Score = 23.5 bits (45), Expect(2) = 5.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1 / -2

                                           
Query: 682  KLPMSYIIPFPKKGDPSSAQDFGQGRLVLAV 774
            +LP  +I+P+ + G     Q F +  L+L V
Sbjct: 1705 RLPQQHILPWSRLGGIPQGQYFHRTSLLLRV 1613



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>LOC_Os04g10320:12004.t00865:unspliced-genomic hypothetical protein|
          Length = 2727

 Score = 25.4 bits (49), Expect(2) = 5.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3 / +1

                                             
Query: 876 ESTRESCSILQSGCAPRGPSAMKNLGGHLPCTSK 977
           + TR +   ++  C PRG  + K+   H P +++
Sbjct: 232 QMTRRTLPRVRPTCTPRGACSRKSSSSHRPPSAR 333



 Score = 24.4 bits (47), Expect(2) = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3 / +1

                       
Query: 759 ASLSCLSWHNST 794
           AS+SC+ WH  T
Sbjct: 205 ASISCIPWHQMT 240



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>LOC_Os10g09740:12010.t00787:unspliced-genomic hypothetical protein|
          Length = 1639

 Score = 32.7 bits (65), Expect = 5.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3 / -1

                                              
Query: 384 IWSFSCTKKKDRNQ*TEKEEDEVRYGYNKIFFCIY 488
           IW+F+C   +++ +  +KE+  V YG   IFF  Y
Sbjct: 622 IWAFACHLIREKIKRKKKEKGRVPYGTAAIFFAPY 518



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>LOC_Os09g27160:12009.t02395:unspliced-genomic expressed protein|
          Length = 1780

 Score = 32.7 bits (65), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3 / -2

                            
Query: 735 CSGFWTGSASLSCLSWH 785
           C G W+G  S SC+ WH
Sbjct: 456 CRGEWSGGGSCSCMRWH 406



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>LOC_Os04g20960:12004.t005550:unspliced-genomic expressed protein|
          Length = 33278

 Score = 32.7 bits (65), Expect = 5.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2 / -2

                                                      
Query: 1016  DAVILFYLQPTRWRSSYYSTTIVCIYIES*SWLACHVCTYI 1138
             D  I ++   T+ +S  Y   +  IYI S SWL  + CT +
Sbjct: 20056 DGAIFWFSSFTKHKSHTYPRKVGYIYIYSHSWLLAYCCTLL 19934



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>LOC_Os03g61270:12003.t05360:unspliced-genomic 1,4-beta-D-mannan endohydrolase precursor, putative, expressed|
          Length = 1819

 Score = 32.7 bits (65), Expect = 5.7
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -1 / +3

                                                                        
Query: 585  LHHKPLVFFIIRLYPRCNLLSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFTDFYLFS 406
            LH    + F   LY  C LL    CSL  LA   CR      R+ +  +  L+  F    
Sbjct: 1626 LHLFKTILFFSSLYIACILLLRYSCSLAHLATVTCRNHQERFRMAVLTMYVLYHSFLYKV 1805

               
Query: 405  WCS 397
            +C+
Sbjct: 1806 FCN 1814



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>LOC_Os01g72940:12001.t06579:unspliced-genomic phosphatidylserine decarboxylase, putative, expressed|
          Length = 7724

 Score = 32.7 bits (65), Expect = 5.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1 / +1

                                                  
Query: 528  LSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFTDFY 415
            L   +CSLV L  H    +S    IGL P + +FTD++
Sbjct: 5164 LVLPICSLVGLYLHST*VRSLSFAIGL*PCVHIFTDYF 5277



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>LOC_Os11g29274:12011.t02533:unspliced-genomic conserved hypothetical protein|
          Length = 2654

 Score = 29.9 bits (59), Expect(2) = 7.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1 / +1

                                        
Query: 1081 CMYIYRELELACMPCMHIYLELRVVMEV 1164
            CMY+Y  + +    CM+IY+ + V M V
Sbjct: 1348 CMYVYMYIYVCMYVCMYIYVCMYVCMYV 1431



 Score = 24.4 bits (47), Expect(2) = 7.2
 Identities = 7/20 (35%), Positives = 8/20 (40%)
 Frame = +2 / +3

                               
Query: 128 LWPEGTSLAFWTRPRSWTSC 187
           +WP     A W R   W  C
Sbjct: 345 IWPADNGDAVWRRSSPWRRC 404



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>LOC_Os07g24140:12007.t02111:unspliced-genomic hypothetical protein|
          Length = 1541

 Score = 26.3 bits (51), Expect(2) = 7.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1 / -3

                                 
Query: 582  HHKPLVFFIIRLYPRCNLLSF 520
            HHKP   F      RCN+L F
Sbjct: 1065 HHKPKKIFSCGPETRCNILKF 1003



 Score = 23.1 bits (44), Expect(2) = 7.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1 / -3

                          
Query: 606  FLIEMYDLHHKPLV 565
            FL  MYD++H PL+
Sbjct: 1131 FLHVMYDVNHHPLL 1090



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>LOC_Os09g20380:12009.t01772:unspliced-genomic transposon protein, putative, Mutator sub-class|
          Length = 3419

 Score = 32.2 bits (64), Expect = 7.8
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -3 / +2

                                
Query: 1021 RIIRLENCHLRTLYHLLVQG 962
            R+I+++NC +  +Y+LLV+G
Sbjct: 2609 RLIKMQNCQIHAIYYLLVKG 2668



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>LOC_Os01g67000:12001.t06058:unspliced-genomic membrane-associated 30 kDa protein, chloroplast precursor, putative,|
            expressed
          Length = 4501

 Score = 26.7 bits (52), Expect(2) = 9.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1 / +1

                                                    
Query: 1194 HLIVLKQPSINFHYNS*LEIYVHTWHASQL*LSIYIHTMV 1075
            HL+V+   SI F++     + +HTW    L  S  +  M+
Sbjct: 2623 HLLVVDYSSITFYFGCSEPLTLHTWTFFSLRTSTKVSEML 2742



 Score = 22.1 bits (42), Expect(2) = 9.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3 / +3

                        
Query: 985  LYHLLVQGRCPP 950
            LYHL VQ   PP
Sbjct: 2868 LYHLFVQWALPP 2903


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 485,787,957
Number of extensions: 7632558
Number of successful extensions: 28489
Number of sequences better than 10.0: 20
Length of query: 424
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 374
Effective length of database: 52,799,986
Effective search space: 19747194764
Effective search space used: 19747194764
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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