>LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein|
Length = 14375
Score = 107 bits (228), Expect(9) = e-107
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +1 / +2
Query: 673 RKYKLPMSYIIPFPKKGDPSSAQDFGQGRLVLAVYPGTTALYRATVASHRK 825
RKYKLPMS IIPFPK+GDPSSA DFGQGR VLAVYP TTALYRATVAS+RK
Sbjct: 10424 RKYKLPMSDIIPFPKRGDPSSAPDFGQGRQVLAVYPSTTALYRATVASNRK 10576
Score = 85.4 bits (180), Expect(9) = e-107
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = +1 / +1
Query: 418 EISEQKKKRMKSDTDTTRFSSASMRSQLDQAANLKGEQVA 537
E+ EQKKKRMKSDTDTTRFSSASMRSQLDQA NLKGEQV+
Sbjct: 5830 EVGEQKKKRMKSDTDTTRFSSASMRSQLDQATNLKGEQVS 5949
Score = 83.5 bits (176), Expect(9) = e-107
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1 / +2
Query: 841 YNLLFDDDEEDGNLPERAVPFYRVVALPEGHRQ*KTSVD 957
Y LLFDDDEEDGNLP+RAVPFYRVV LPEGHRQ*K+ +D
Sbjct: 13874 YLLLFDDDEEDGNLPQRAVPFYRVVPLPEGHRQ*KSQLD 13990
Score = 70.3 bits (147), Expect(9) = e-107
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +1 / +3
Query: 529 QVAARVKSDDEKDEWFVVKVIHFDKETKEF 618
QVAA+VKSD+EKDEWFVVKVIHFDKETKE+
Sbjct: 7176 QVAAKVKSDEEKDEWFVVKVIHFDKETKEY 7265
Score = 67.5 bits (141), Expect(9) = e-107
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / +3
Query: 339 QCFICFGWTIRWFVAIWSFSCTKKKDR 419
QC +CFGWTI WFVAIW+FSCT KKDR
Sbjct: 5664 QCIVCFGWTIGWFVAIWNFSCTTKKDR 5744
Score = 57.9 bits (120), Expect(9) = e-107
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1 / +1
Query: 163 KAKELDQLRKEQDDVASEINKIHKKIIS 246
KAKELDQLRKEQD+V +EINK+HKKI+S
Sbjct: 283 KAKELDQLRKEQDEVVTEINKMHKKILS 366
Score = 41.4 bits (84), Expect(9) = e-107
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1 / +2
Query: 220 NKIHKKIISSPEMVDKSVDAMMARLRGFYVQAR 318
N +H +PEMVDK VDA + RLR Y +A+
Sbjct: 3257 NSLHLVCFVAPEMVDKQVDATLIRLRALYTRAK 3355
Score = 33.1 bits (66), Expect(9) = e-107
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 137 EGTSLAFWTRPRSWTSC 187
E T A W RPRSWTSC
Sbjct: 257 ERTLRACWIRPRSWTSC 307
Score = 31.8 bits (63), Expect(9) = e-107
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 614 NLKYWMRSLVMMKRAPKSLR 673
+++Y MRS V MKR PKS+R
Sbjct: 8286 DMRYLMRSQVTMKRVPKSMR 8345
Score = 100 bits (213), Expect(7) = 5e-65
Identities = 45/54 (83%), Positives = 46/54 (85%)
Frame = -2 / -3
Query: 833 DFLLR*EATVALYSAVVPG*TAKTSRPCPKS*ALDGSPFFGNGIIYDIGNLYFL 672
D LR EATVALYSAVV G*TAKT RPCPKS AL+GSP FGNGII DIGNLYFL
Sbjct: 10584 DVTLRLEATVALYSAVVLG*TAKTCRPCPKSGALEGSPLFGNGIISDIGNLYFL 10423
Score = 74.4 bits (156), Expect(7) = 5e-65
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -1 / -3
Query: 534 NLLSFKVCSLVKLAPHRCRRKSCCIRIGLHPLLFLFTDF 418
NL SF+VCSLVKLAPHRCR +SC I I LHPLLFL T+F
Sbjct: 5946 NLFSFQVCSLVKLAPHRCRGESCSICIRLHPLLFLLTNF 5830
Score = 57.0 bits (118), Expect(7) = 5e-65
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 944 FHCRWPSGSATTL*NGTALSGRFP 873
FHCRWPSG TTL*NGTAL GRFP
Sbjct: 13977 FHCRWPSGRGTTL*NGTALCGRFP 13906
Score = 50.1 bits (103), Expect(7) = 5e-65
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 612 FCFLIEMYDLHHKPLVFFIIRLYPRCNL 529
FCFLIEMY LHHKP +FF + CNL
Sbjct: 7259 FCFLIEMYHLHHKPFIFFFV*FDLSCNL 7176
Score = 46.0 bits (94), Expect(7) = 5e-65
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 401 AAETPDCNKPSNSPTKAD 348
AAE PDCNKPSNSPTKAD
Sbjct: 5726 AAEVPDCNKPSNSPTKAD 5673
Score = 34.5 bits (69), Expect(7) = 5e-65
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -3 / -1
Query: 673 SQTFGRSLHHHQAPHPVLQILLF 605
S TFG SLH H APH V I F
Sbjct: 8345 SHTFGHSLHRHLAPHQVPHICKF 8277
Score = 29.0 bits (57), Expect(7) = 5e-65
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3 / -1
Query: 340 *FHSQRVLLLAHKIHEA*PSWHQLIYPPSL 251
* HS +VL + HEA + HQ +Y PSL
Sbjct: 3377 *LHSHKVLWHVYIKHEAEST*HQPVYQPSL 3288
Score = 75.3 bits (158), Expect(7) = 3e-52
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +3 / +1
Query: 660 PKV*EEVQVTYVIYYSISKERRSV*CSGFWTGSASLSCLSWHNSTI*GHRSLSS*EEI 833
P +* EVQV YV YYSISKER S C FW GS SLSCLS HNSTI* + L S* I
Sbjct: 10411 PLL**EVQVAYVRYYSISKERGSFQCPRFWAGSTSLSCLS*HNSTI*SYCCL*S*GNI 10584
Score = 60.2 bits (125), Expect(7) = 3e-52
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 417 RNQ*TEKEEDEVRYGYNKIFFCIYEEPT*PSCKP*RRAG 533
R+ * EKEEDEV Y Y I CIYEEPT*PS KP RR G
Sbjct: 5829 RSW*AEKEEDEV*YRYYTILLCIYEEPT*PSYKPERRTG 5945
Score = 54.7 bits (113), Expect(7) = 3e-52
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +2 / +2
Query: 338 SVLHLLWLDY*MVCCNLEFQLHQEKR*KSVNR 433
+V LLWLDY MVCCNLE QLH EKR* S +
Sbjct: 5663 AVHRLLWLDYWMVCCNLELQLHNEKR*VSTRK 5758
Score = 48.3 bits (99), Expect(7) = 3e-52
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3 / +1
Query: 840 LQSLI***RRGWESTRESCSILQSGCAPRGPSAMK 944
L +L+***R GW+ST +SC++L SG +P GP A+K
Sbjct: 13873 LSTLV***RGGWKSTTKSCAVL*SGSSPGGPPAVK 13977
Score = 46.0 bits (94), Expect(7) = 3e-52
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3 / +2
Query: 528 AGCSEGKVG**KRRVVCGEGHTFR*GNKRI 617
+GCS G++ KR +VCGEG TFR*GNKR+
Sbjct: 7175 SGCS*GQIRRRKR*MVCGEGDTFR*GNKRV 7264
Score = 36.8 bits (74), Expect(7) = 3e-52
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1 / +1
Query: 163 KAKELDQLRKEQDDVASEINKIHK 234
K LDQL+K+QD + +IN+IHK
Sbjct: 2245 KLNHLDQLQKDQDSITEKINEIHK 2316
Score = 25.8 bits (50), Expect(7) = 3e-52
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 252 RDGG*IS*CHDG*ASWILCASKRTL*E*NQ 341
RDG * *C+ AS + +RTL*E*+Q
Sbjct: 3289 RDG**TG*CYVDSASCFIYTCQRTL*E*SQ 3378
Score = 79.0 bits (166), Expect(6) = 1e-44
Identities = 35/51 (68%), Positives = 37/51 (72%)
Frame = -1 / -2
Query: 840 IIRFPLTMRGYGGPI*CCCARINS*D*PTLSKILSTRRISFLWKWNNI*HR 688
I+R LT+RG I*CCCARINS*D TL KI T RI LWKWNNI*HR
Sbjct: 10591 ILRCYLTIRGNSSSI*CCCARINS*DLSTLPKIWGTGRIPSLWKWNNI*HR 10439
Score = 58.8 bits (122), Expect(6) = 1e-44
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = -2 / -1
Query: 533 TCSPLRFAAWSSWLLIDAEENLVVSV 456
TCSP RF AWSSWLLIDAEEN VVSV
Sbjct: 5945 TCSPFRFVAWSSWLLIDAEENRVVSV 5868
Score = 53.3 bits (110), Expect(6) = 1e-44
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -1 / -2
Query: 945 FSLPMALWERNHSVKWNSSLW*IPILFVIIK*E 847
FSLP+AL ERNHS++ +SSLW*I IL VIIK E
Sbjct: 13978 FSLPVALRERNHSIERHSSLW*ISILLVIIKQE 13880
Score = 42.8 bits (87), Expect(6) = 1e-44
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / -3
Query: 417 YLFSWCS*NSRLQQTI**SNQSR 349
YLFS CS*+SRLQQTI *SNQSR
Sbjct: 5742 YLFSLCS*SSRLQQTIQ*SNQSR 5674
Score = 37.7 bits (76), Expect(6) = 1e-44
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / -3
Query: 613 LLFPYRNV*PSPQTTRLF 560
LLFPYRNV PSPQT LF
Sbjct: 7260 LLFPYRNVSPSPQTIHLF 7207
Score = 28.6 bits (56), Expect(6) = 1e-44
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1 / -2
Query: 339 DFTLREFSCLHIKSTKPSHHGIN*FI 262
DFTL +F I STKP+ IN FI
Sbjct: 3376 DFTLTKFFGTCI*STKPNQRSINLFI 3299
Score = 73.0 bits (153), Expect(6) = 5e-42
Identities = 39/61 (63%), Positives = 43/61 (70%)
Frame = +2 / +3
Query: 659 PKSLRGSTSYLCHILFHFQRKEIRLVLRILDRVG*S*LFILAQQHYIGPP*PLIVRGNLM 838
P + GSTS LC ILFHFQR+ I V +IL RV S*LFILAQQHYI PLIVR +L
Sbjct: 10410 PPFVIGSTSCLCQILFHFQREGILPVPQILGRVDKS*LFILAQQHYIELLLPLIVR*HLK 10589
Query: 839 I 841
I
Sbjct: 10590 I 10592
Score = 58.8 bits (122), Expect(6) = 5e-42
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +2 / +2
Query: 419 KSVNRKRRG*SPIRIQQDFLLHL*GANLTKLQTLKESRLQ 538
K V+RKRRG*S I+I D LHL*GANLTKLQT KE+R Q
Sbjct: 5831 KLVSRKRRG*SLIQILHDSPLHL*GANLTKLQT*KENRFQ 5950
Score = 47.8 bits (98), Expect(6) = 5e-42
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 833 LMITISYLMMTKRMGIYQRELFHFTEWLRSQRAIGNEKPRW 955
L + S LMMT+RM IY +EL EW S+RA G+E W
Sbjct: 13866 LAVIYSCLMMTRRMEIYHKELCRSIEWFLSRRATGSENLSW 13988
Score = 43.2 bits (88), Expect(6) = 5e-42
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 530 RLQRG*SRMMKKTSGLW*RSYISIRKQKNLKY 625
RLQ ++ KK +GLW*R YISIRKQK++ Y
Sbjct: 7177 RLQLRSNQTKKKMNGLW*R*YISIRKQKSMSY 7272
Score = 40.9 bits (83), Expect(6) = 5e-42
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1 / +1
Query: 358 VGLLDGLLQSGVSAAPRKKI 417
VGLLDGLLQSG SAA RKKI
Sbjct: 5683 VGLLDGLLQSGTSAAQRKKI 5742
Score = 27.2 bits (53), Expect(6) = 5e-42
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 201 RCGLRDQQDPQEDHLL 248
R G RDQQD QED LL
Sbjct: 321 RGGHRDQQDAQEDPLL 368
Score = 73.9 bits (155), Expect(3) = 1e-23
Identities = 36/56 (64%), Positives = 39/56 (69%)
Frame = -3 / -1
Query: 823 YDERLRWPYIVLLCQDKQLRLADPVQNPEH*TDLLSLEME*YMT*VTCTSSQTFGR 656
YD R + YIVLLC DKQLRL DP QN H D LSLEME*Y+T* TCTS G+
Sbjct: 10574 YD*RQQ*LYIVLLC*DKQLRLVDPAQNLGHWKDPLSLEME*YLT*ATCTSYYKRGK 10407
Score = 48.7 bits (100), Expect(3) = 1e-23
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -3 / -1
Query: 955 PPRFFIADGPLGAQPLCKMEQLSLVDSHPLRHHQIRDCNHQ 833
P F A GP G +PL + QL +VD HP RHHQ R N Q
Sbjct: 13988 PTEIFTAGGPPGEEPLYRTAQLFVVDFHPPRHHQTRVDNCQ 13866
Score = 39.1 bits (79), Expect(3) = 1e-23
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -3 / -2
Query: 400 QLKLQIATNHLIVQPKQMKH 341
QLK QIATNH IVQPKQ H
Sbjct: 5725 QLKFQIATNHPIVQPKQTMH 5666
Score = 46.9 bits (96), Expect = 3e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1 / +2
Query: 616 FEVLDEEPGDDEESAQKFERKYKLPMSYIIPF 711
+EVLDEEPGDDEESAQK+E L +++ F
Sbjct: 8288 YEVLDEEPGDDEESAQKYEISPGLSFWFLVCF 8383
>LOC_Os01g67000:12001.t06058:unspliced-genomic membrane-associated 30 kDa protein, chloroplast precursor, putative,|
expressed
Length = 4501
Score = 26.7 bits (52), Expect(2) = 9.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1 / +1
Query: 1194 HLIVLKQPSINFHYNS*LEIYVHTWHASQL*LSIYIHTMV 1075
HL+V+ SI F++ + +HTW L S + M+
Sbjct: 2623 HLLVVDYSSITFYFGCSEPLTLHTWTFFSLRTSTKVSEML 2742
Score = 22.1 bits (42), Expect(2) = 9.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3 / +3
Query: 985 LYHLLVQGRCPP 950
LYHL VQ PP
Sbjct: 2868 LYHLFVQWALPP 2903
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 485,787,957
Number of extensions: 7632558
Number of successful extensions: 28489
Number of sequences better than 10.0: 20
Length of query: 424
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 374
Effective length of database: 52,799,986
Effective search space: 19747194764
Effective search space used: 19747194764
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)