ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf73e13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | D10962:Os07g0184300 | 39 | 0.005 | 2 | AK121716:Os03g0798600 | 39 | 0.005 | 3 | AY332479:Os01g0342700 | 32 | 0.48 | 4 | AK106603:Os01g0342700 | 32 | 0.48 | 5 | Os01g0790200:Os01g0790200 | 31 | 1.4 | 6 | AK121722:Os01g0609900 | 31 | 1.4 | 7 | AK065988:Os01g0609900 | 31 | 1.4 | 8 | Os06g0729900:Os06g0729900 | 29 | 5.3 | 9 | Os02g0208300:Os02g0208300 | 29 | 5.3 | 10 | AK121545:Os02g0163400 | 29 | 5.3 | 11 | AK099687:Os03g0162900 | 28 | 6.9 | 12 | AK121357:Os02g0793100 | 28 | 9.0 | 13 | AK099688:Os05g0215600 | 28 | 9.0 | 14 | AK066642:Os05g0215600 | 28 | 9.0 |
|---|
>D10962:Os07g0184300 | Length = 118 Score = 38.9 bits (89), Expect = 0.005 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +2 Query: 260 LQRIKK---SGESLNGRKIWSRRSSILPEFVGSSALIYNGKTHVRCRITEGKVGHKFGEF 430 L++ KK +GE + R I+PE +GS +YNGKT + I +GH EF Sbjct: 33 LRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 92 Query: 431 AFTRKRRPH 457 + + K H Sbjct: 93 SISYKPVKH 101
>AK121716:Os03g0798600 | Length = 154 Score = 38.9 bits (89), Expect = 0.005 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +2 Query: 260 LQRIKK---SGESLNGRKIWSRRSSILPEFVGSSALIYNGKTHVRCRITEGKVGHKFGEF 430 L++ KK +GE + R I+PE +GS +YNGKT + I +GH EF Sbjct: 69 LRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 128 Query: 431 AFTRKRRPH 457 + + K H Sbjct: 129 SISYKPVKH 137
>AY332479:Os01g0342700 | Length = 1451 Score = 32.3 bits (72), Expect = 0.48 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 9/42 (21%) Frame = +2 Query: 611 YSRSYFVLCLLC*WFQHNL---------RVHLLFTEAIALIF 709 YSRS+F C+ C W +H L V LLFT IAL+F Sbjct: 1172 YSRSFFTQCIACLW-KHKLSYWRNPSYTAVRLLFTIIIALLF 1212
>AK106603:Os01g0342700 | Length = 701 Score = 32.3 bits (72), Expect = 0.48 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 9/42 (21%) Frame = +2 Query: 611 YSRSYFVLCLLC*WFQHNL---------RVHLLFTEAIALIF 709 YSRS+F C+ C W +H L V LLFT IAL+F Sbjct: 422 YSRSFFTQCIACLW-KHKLSYWRNPSYTAVRLLFTIIIALLF 462
>Os01g0790200:Os01g0790200 | Length = 519 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +1 Query: 217 QLKASMEGSVR----RRVPAENKEERGEPERQEDLVSQVFDPAGVRR 345 Q K EG VR VPAE +E+ GEPE E+ D G+RR Sbjct: 440 QAKIQGEGIVRCLPDMAVPAEEEEKEGEPEADEEPTDDQ-DSEGIRR 485
>AK121722:Os01g0609900 | Length = 1450 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Frame = +2 Query: 611 YSRSYFVLCLLC*WFQH--------NLRVHLLFTEAIALIF 709 YSRS+ CL C W Q+ V LLFT IAL+F Sbjct: 1171 YSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMF 1211
>AK065988:Os01g0609900 | Length = 1388 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Frame = +2 Query: 611 YSRSYFVLCLLC*WFQH--------NLRVHLLFTEAIALIF 709 YSRS+ CL C W Q+ V LLFT IAL+F Sbjct: 1109 YSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMF 1149
>Os06g0729900:Os06g0729900 | Length = 323 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +1 Query: 178 SAAFGVRISGSCFQLKASMEGSVRRRVPAENKEERGEPERQEDLVSQVFDPAGVRRLLRA 357 + A G +I+G+ KA +GS+RRR E + + Q+D+ + DP + + L Sbjct: 185 NGASGAKINGTA---KAKQDGSIRRRQKVEADQVSNTTDTQDDVFT---DPIKMTKSLL- 237 Query: 358 HLQRQDPRPLQDHRR 402 PRP+ R+ Sbjct: 238 ------PRPISSIRQ 246
>Os02g0208300:Os02g0208300 | Length = 1444 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Frame = +2 Query: 611 YSRSYFVLCLLC*WFQHN--------LRVHLLFTEAIALIF 709 +S+ +F C+ C W QH + FT IALIF Sbjct: 1165 FSQPFFTQCMACLWKQHKSYWRNPSYTATRIFFTTVIALIF 1205
>AK121545:Os02g0163400 | Length = 108 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Frame = +1 Query: 244 VRRRVPAENKEERGEPERQEDLVSQVFDPAG--VRRLL---RAHLQRQDPR 381 ++RR PA + P R+ ++ + P+G + R+L RAHL+RQ+ + Sbjct: 18 LKRRPPASGAADTMSPVRKIQMLEEELRPSGGEISRILQRARAHLERQEEK 68
>AK099687:Os03g0162900 | Length = 823 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 566 CLCFNHALIPPSLNPPFMLLTSSP 495 C CF HA PP LNPP L ++P Sbjct: 5 CDCFLHATAPP-LNPPSSLAAAAP 27
>AK121357:Os02g0793100 | Length = 1154 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/76 (23%), Positives = 38/76 (50%) Frame = +1 Query: 163 PARRVSAAFGVRISGSCFQLKASMEGSVRRRVPAENKEERGEPERQEDLVSQVFDPAGVR 342 P V +A R+ S ++ A ++ + + PA+ KEE E +++++ + + +P G Sbjct: 1061 PEEEVKSAAAERLKVSMERI-ALLKAAKPKVPPAKTKEEEEEEKKEQEDLDEFGNPKGPS 1119 Query: 343 RLLRAHLQRQDPRPLQ 390 L + + + R LQ Sbjct: 1120 TLSKLTAEEAEHRALQ 1135
>AK099688:Os05g0215600 | Length = 148 Score = 28.1 bits (61), Expect = 9.0 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Frame = +1 Query: 166 ARRVSAAFGVRIS--GSCFQLKASMEGS-VRRRVPAENKEERGEPERQEDLVSQVFDPAG 336 ARR S G R + G+ F + A+ G V+ E +EE +E +V +V DP Sbjct: 13 ARRPSPCGGHRRARGGARFSVSAAAPGGGVKEEEEEEEEEEEKGTRGKERIVIRVSDPVR 72 Query: 337 VRRLLRAHLQRQD-PRPLQDHRR 402 RRL D P P RR Sbjct: 73 ERRLPPPLFSSPDAPSPAAGRRR 95
>AK066642:Os05g0215600 | Length = 300 Score = 28.1 bits (61), Expect = 9.0 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Frame = +1 Query: 166 ARRVSAAFGVRIS--GSCFQLKASMEGS-VRRRVPAENKEERGEPERQEDLVSQVFDPAG 336 ARR S G R + G+ F + A+ G V+ E +EE +E +V +V DP Sbjct: 13 ARRPSPCGGHRRARGGARFSVSAAAPGGGVKEEEEEEEEEEEKGTRGKERIVIRVSDPVR 72 Query: 337 VRRLLRAHLQRQD-PRPLQDHRR 402 RRL D P P RR Sbjct: 73 ERRLPPPLFSSPDAPSPAAGRRR 95 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,505,792 Number of extensions: 403349 Number of successful extensions: 1277 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1277 Number of HSP's successfully gapped: 14 Length of query: 305 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 205 Effective length of database: 11,395,755 Effective search space: 2336129775 Effective search space used: 2336129775 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
