ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76h14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065504:Os02g0244100 | 511 | 0.0 | 2 | AK100646:Os06g0154900 | 92 | 1e-18 | 3 | Os08g0143600:Os08g0143600 | 32 | 1.1 | 4 | Os02g0818800:Os02g0818800 | 31 | 3.2 | 5 | AK107132:Os06g0625900 | 30 | 4.1 | 6 | AJ427972:Os06g0625900 | 30 | 4.1 | 7 | AY224467:Os03g0238800 | 30 | 5.4 | 8 | AK070656:Os07g0689600 | 30 | 5.4 | 9 | AB023819:Os07g0689600 | 30 | 5.4 | 10 | AK108666:Os02g0298200 | 30 | 7.1 | 11 | AK099859:Os07g0620200 | 30 | 7.1 | 12 | AK070620:Os09g0346700 | 30 | 7.1 | 13 | Os07g0543600:Os07g0543600 | 29 | 9.2 |
|---|
>AK065504:Os02g0244100 | Length = 423 Score = 511 bits (1317), Expect(2) = 0.0 Identities = 255/327 (77%), Positives = 277/327 (84%), Gaps = 1/327 (0%) Frame = +1 Query: 553 RCPFCKTPNYAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRKQSRCS 732 +CPFCKTP+YAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKM+RKQ+RCS Sbjct: 100 QCPFCKTPSYAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMKRKQNRCS 159 Query: 733 SSRTIAPTTEVEYRDICSTSYSAPPYRXXXXXXXXXXXXXXXXXXXNMRSFHSRHTRDGN 912 SSRTI PT EVEYRDICSTS+S P YR +MR FHSRH RD N Sbjct: 160 SSRTITPTKEVEYRDICSTSFSVPSYRCAEQETECCSSEPSCSAQTSMRPFHSRHNRDDN 219 Query: 913 IDMNIEDMMVMEAIWRSIQEQGSIGNPACGSFMPFEQPT-RERQAFVAASPLEIPHPGGF 1089 IDMNIEDMMVMEAIWRSI QGSIGNP CG+FMP +P+ RERQ FV A+ LEIPH GGF Sbjct: 220 IDMNIEDMMVMEAIWRSI--QGSIGNPVCGNFMPVTEPSPRERQPFVPAASLEIPHGGGF 277 Query: 1090 SCAVAAMTEHQPSSMDFSYMTGSSAFPVFDMFRRPCNIAGGSLRAVESSLDSWSGIAPSG 1269 SCAVAAM EHQP SMDFSYM GSSAFPVFDMFRRPCNIAGGS+ +ESS +SWSGIAPS Sbjct: 278 SCAVAAMAEHQPPSMDFSYMAGSSAFPVFDMFRRPCNIAGGSMCNLESSPESWSGIAPS- 336 Query: 1270 TRREMVREEGECSIDHWSEGAEAGTSYAGSDIMADAGTMPPLPFADNYSMAASHFRPESI 1449 RE+VREEGECS DHWSEGAEAGTSYAGSDI+ADAGTMP LPFA+N++MA SHFRPESI Sbjct: 337 CSREVVREEGECSADHWSEGAEAGTSYAGSDIVADAGTMPQLPFAENFAMAPSHFRPESI 396 Query: 1450 EEQMMYSMAVSLAEAHGRTHTQGLTWL 1530 EEQMM+SMA+SLA+ HGRTH+QGL WL Sbjct: 397 EEQMMFSMALSLADGHGRTHSQGLAWL 423 Score = 176 bits (447), Expect(2) = 0.0 Identities = 85/98 (86%), Positives = 86/98 (87%), Gaps = 1/98 (1%) Frame = +3 Query: 171 IGGRRKAGVEERYTRPQGLYEHRDIDQKKLRKLILEAKLAPCYPXXXXXXXXX-LEECPI 347 IGGRRKAGVEERYTRPQGLYEHRDIDQKKLRKLILEAKLAPCY LEECPI Sbjct: 5 IGGRRKAGVEERYTRPQGLYEHRDIDQKKLRKLILEAKLAPCYMGADDAAAAADLEECPI 64 Query: 348 CFLYYPSLNRSKCCSKGICTECFLQMKPTHTARPTQYP 461 CFLYYPSLNRSKCCSKGICTECFLQMKPTHTA+PTQ P Sbjct: 65 CFLYYPSLNRSKCCSKGICTECFLQMKPTHTAQPTQCP 102
>AK100646:Os06g0154900 | Length = 167 Score = 92.0 bits (227), Expect = 1e-18 Identities = 43/75 (57%), Positives = 59/75 (78%) Frame = +1 Query: 553 RCPFCKTPNYAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRKQSRCS 732 RCP+CK +YAVEYRGVKTKEE+ EQ EEQ+VIEAQ+RMRQQ LQD+ ++M++KQ+ + Sbjct: 3 RCPYCKMASYAVEYRGVKTKEEKGTEQIEEQRVIEAQIRMRQQELQDDAERMKKKQA--A 60 Query: 733 SSRTIAPTTEVEYRD 777 + + T +VE+ D Sbjct: 61 ALTDVVTTAQVEHCD 75
>Os08g0143600:Os08g0143600 | Length = 481 Score = 32.3 bits (72), Expect = 1.1 Identities = 50/213 (23%), Positives = 74/213 (34%), Gaps = 5/213 (2%) Frame = +1 Query: 877 RSFHSRHTRDGNIDMNIEDMMVMEAIWRSIQEQGSIGNPACGSFMPFEQPTRERQAFVAA 1056 R H H G +D D+ R I G A G+F+ +A AA Sbjct: 117 RRLHGEHDWRGLLDPLHPDLR------REIVRYGEFVGAAYGAFLSRPDAAPGDRAR-AA 169 Query: 1057 SPLEIPHPGGFSCAVAAMTEHQPSSMDFSYMTGSSAFPVFDMFRRPCNIAGGSLRAVESS 1236 PL+ GG A + + T S P + PC SL + Sbjct: 170 PPLQ---DGGAYRVTAPL-----------FATSSVGLPAWLASAAPCAAQRTSLVGYVAV 215 Query: 1237 LDSWSGIAPSGTRREMVREEGECSIDHWSEGAEAGTSYAGSDIMADAGTMPPLP-----F 1401 DS + + G R ++ G C++ W+E AG A A P P F Sbjct: 216 CDSPAEVRRMGRRDIVIALRGTCTVLEWAENVRAGLVPATDAASAADSPDAPTPKVECGF 275 Query: 1402 ADNYSMAASHFRPESIEEQMMYSMAVSLAEAHG 1500 + Y AA+ P S+ E ++ + L + G Sbjct: 276 WNLYKTAAAGGSP-SLSEMVVSEVRRLLTKYEG 307
>Os02g0818800:Os02g0818800 | Length = 654 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = +1 Query: 1030 RERQAFVAASPLEIPHPGGFSCAVAAMTEHQPSSMDFS---YMTGSSAFPVF 1176 R+R+ S ++P FS A+AA + H S FS ++ S AF VF Sbjct: 121 RDRRPCPVDSQEDVPDSSSFSAALAACSHHASPSPGFSIHAFLLNSDAFEVF 172
>AK107132:Os06g0625900 | Length = 514 Score = 30.4 bits (67), Expect = 4.1 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 14/109 (12%) Frame = +1 Query: 1189 RPCNIAGGSLRAVESSLDSWSGIAPSGTRREMVREEG------ECSIDHWSEGAEAGTSY 1350 +P N+ GG E + + PSG+ R M + G E ++ G+ G+S Sbjct: 342 KPKNVCGGGAEESEKEEEERMSVIPSGSIRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSR 401 Query: 1351 AGS---DIMADAGTMPPLPFAD----NYSMAASHFRPES-IEEQMMYSM 1473 G +IM+ + + PP+ A + + A+ RP++ + E++ M Sbjct: 402 GGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELM 450
>AJ427972:Os06g0625900 | Length = 843 Score = 30.4 bits (67), Expect = 4.1 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 14/109 (12%) Frame = +1 Query: 1189 RPCNIAGGSLRAVESSLDSWSGIAPSGTRREMVREEG------ECSIDHWSEGAEAGTSY 1350 +P N+ GG E + + PSG+ R M + G E ++ G+ G+S Sbjct: 671 KPKNVCGGGAEESEKEEEERMSVIPSGSIRMMEEDGGAGAPSSEDTVGGSGSGSGRGSSR 730 Query: 1351 AGS---DIMADAGTMPPLPFAD----NYSMAASHFRPES-IEEQMMYSM 1473 G +IM+ + + PP+ A + + A+ RP++ + E++ M Sbjct: 731 GGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELM 779
>AY224467:Os03g0238800 | Length = 563 Score = 30.0 bits (66), Expect = 5.4 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1 Query: 595 RGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRKQSRCSSSRTIAPTTEVEY 771 R V KEE+ ++ E + V+EA+ + + E +K R Q+ S + P T VEY Sbjct: 169 REVHNKEEKGMK--EAENVVEAKSSQLESLVSHEGEKTPRPQAVAEGSSKVVP-TPVEY 224
>AK070656:Os07g0689600 | Length = 343 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = -1 Query: 1304 HSPSSRTISLLVPLGAIPLQLSSELSTARRLPPAMLH 1194 H P++ S L LG+ PL LSS + AR LP A H Sbjct: 133 HLPAAPPPSRLAFLGSGPLPLSSLVLAARHLPAASFH 169
>AB023819:Os07g0689600 | Length = 343 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/37 (45%), Positives = 21/37 (56%) Frame = -1 Query: 1304 HSPSSRTISLLVPLGAIPLQLSSELSTARRLPPAMLH 1194 H P++ S L LG+ PL LSS + AR LP A H Sbjct: 133 HLPAAPPPSRLAFLGSGPLPLSSLVLAARHLPAASFH 169
>AK108666:Os02g0298200 | Length = 591 Score = 29.6 bits (65), Expect = 7.1 Identities = 21/99 (21%), Positives = 44/99 (44%) Frame = -1 Query: 1346 LVPASAPSDQ*SIEHSPSSRTISLLVPLGAIPLQLSSELSTARRLPPAMLHGRRNMSKTG 1167 L+P+ AP+ S + +S +I+L + + +P + + R P + + + T Sbjct: 95 LIPSRAPNSPTSTTTTSASTSIALCLQMPLMPATMMTTPIDVRLAPVGIKKPMKPLVSTR 154 Query: 1166 NALLPVM*EKSMLDGWCSVIAATAQENPPGWGISRGEAA 1050 + L V+ +++ + S+ T+Q GW G A Sbjct: 155 SNLSTVITDEAYVGFSASIGTMTSQHYVLGWSFGVGTQA 193
>AK099859:Os07g0620200 | Length = 396 Score = 29.6 bits (65), Expect = 7.1 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 15/83 (18%) Frame = +1 Query: 1198 NIAGGSLRAVESSL---DSWSGIAPSGTRREMVREEGECSIDHWSEGAE-------AGTS 1347 N +GG +E SL DSW+G+A SG+ MV G +I+ ++G + G Sbjct: 307 NASGGVESGIEPSLLGPDSWNGVAESGS---MVGARG-ININEVAKGTDGSSMMHFGGDE 362 Query: 1348 YAGSDIMADA-----GTMPPLPF 1401 G D+ DA G + LPF Sbjct: 363 EIGFDLDVDATDAILGNLQHLPF 385
>AK070620:Os09g0346700 | Length = 985 Score = 29.6 bits (65), Expect = 7.1 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -1 Query: 1493 ASAKETAMEYIICSSMLSGRKWLAAIL*LSAKGNGGIVPAS-AMMSEPA*LVPASAPSDQ 1317 A +E A E ++ SS +G K L I +A GG PAS A S + +S+PS Q Sbjct: 45 ADLREAAYEVLVASSRTTGGKPLTYIPQAAASAGGGGGPASPASASSLSSANASSSPSLQ 104 Query: 1316 *SIEHSPSSR 1287 S+ + +S+ Sbjct: 105 RSLTSAAASK 114
>Os07g0543600:Os07g0543600 | Length = 350 Score = 29.3 bits (64), Expect = 9.2 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +1 Query: 1210 GSLRAVESSLDSWSGIAPSGTRREMVRE-EGECS-IDHWSEGAEAGTS 1347 G L ++S + +G+A S R +V G C + HW EG +AGTS Sbjct: 213 GYLDVLQSGMTYPNGLAISADRSHLVVALTGPCKLVRHWIEGPKAGTS 260 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,812,779 Number of extensions: 1176715 Number of successful extensions: 3473 Number of sequences better than 10.0: 13 Number of HSP's gapped: 3464 Number of HSP's successfully gapped: 14 Length of query: 585 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 479 Effective length of database: 11,155,509 Effective search space: 5343488811 Effective search space used: 5343488811 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
