ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P40210:YM20_YEAST Uncharacterized protein YMR140W - Saccharomyce... 54 2e-06
2Q8NBR9:CK072_HUMAN Uncharacterized protein C11orf72 - Homo sapie... 35 0.76
3Q9UI08:EVL_HUMAN Ena/VASP-like protein - Homo sapiens (Human) 35 1.00
4Q00993:UFO_MOUSE Tyrosine-protein kinase receptor UFO precursor ... 34 1.7
5Q5R896:EVL_PONPY Ena/VASP-like protein - Pongo pygmaeus (Orangutan) 33 2.9
6Q8N2I2:ZN619_HUMAN Zinc finger protein 619 - Homo sapiens (Human) 33 3.8
7Q6FMP4:TFB3_CANGA RNA polymerase II transcription factor B subun... 33 5.0
8Q9HBL0:TENS1_HUMAN Tensin-1 - Homo sapiens (Human) 32 6.5
9Q91Z69:SRGP1_MOUSE SLIT-ROBO Rho GTPase-activating protein 1 - M... 32 6.5
10Q7Z6B7:SRGP1_HUMAN SLIT-ROBO Rho GTPase-activating protein 1 - H... 32 6.5
11A2QE29:SPB4_ASPNG ATP-dependent rRNA helicase spb4 - Aspergillus... 32 8.4
12Q28EM1:FOXJ2_XENTR Forkhead box protein J2 - Xenopus tropicalis ... 32 8.4

>P40210:YM20_YEAST Uncharacterized protein YMR140W - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 489
 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = +3

Query: 336 ECPICFLYYPS-LNRSKCCSKGICTECFLQMK 428
           ECPICFLY+P   N SKCC + ICTECF+Q+K
Sbjct: 270 ECPICFLYFPGPFNYSKCCQQPICTECFVQIK 301



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>Q8NBR9:CK072_HUMAN Uncharacterized protein C11orf72 - Homo sapiens (Human)|
          Length = 251

 Score = 35.4 bits (80), Expect = 0.76
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -2

Query: 1414 CNCQQKATVALSLHPP*CPSRHSLSQPPHPLTSDRLSTLLPLVPFPFWCH-LVLSRSSYL 1238
            C+     +  LS HP  C   HS+ QPP P +  +      L+P P   H L LS   YL
Sbjct: 48   CSISGPGSHLLSTHPILC---HSVYQPPQPASRPQAKRYQGLLPVPLAPHPLCLSGQLYL 104

Query: 1237 VNSPQHAGFHQQCCTVGGTCQRLETH 1160
             N P         CTV   C  + +H
Sbjct: 105  PNIP---------CTVIDGCGPVISH 121



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>Q9UI08:EVL_HUMAN Ena/VASP-like protein - Homo sapiens (Human)|
          Length = 416

 Score = 35.0 bits (79), Expect = 1.00
 Identities = 34/121 (28%), Positives = 46/121 (38%)
 Frame = +1

Query: 916  DMNIEDMMVMEAIWRSIQEQGSIGNPACGSFMPFEQPTRERQAFVAASPLEIPHPGGFSC 1095
            +M+I+   VME   +  QE       A G  +P   P+    A V+ S    P P     
Sbjct: 133  EMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPP 192

Query: 1096 AVAAMTEHQPSSMDFSYMTGSSAFPVFDMFRRPCNIAGGSLRAVESSLDSWSGIAPSGTR 1275
                 T   P  +      GSS      M      IAG  LR V+   D+  G +PSGT 
Sbjct: 193  PPTGATPPPPPPLPAGGAQGSS-HDESSMSGLAAAIAGAKLRRVQRPEDASGGSSPSGTS 251

Query: 1276 R 1278
            +
Sbjct: 252  K 252



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>Q00993:UFO_MOUSE Tyrosine-protein kinase receptor UFO precursor - Mus musculus (Mouse)|
          Length = 888

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
 Frame = -2

Query: 1555 CAHHN------HRVTTMSTLVCAFYHELLLKKQPWNTSFVLRCSRGENGLQPYCNCQQKA 1394
            C  HN       R  T++ L    +H  ++ +QP  T   +  + G +G+ P  +C  +A
Sbjct: 199  CEAHNAKGVTTSRTATITVLPQRPHHLHVVSRQP--TELEVAWTPGLSGIYPLTHCNLQA 256

Query: 1393 TVALS--------LHPP*CPSRHSLSQPPHPLTSDRLSTLLPLVPFPFWCHLVLSRSSYL 1238
             ++            PP  P    +S PPH L   RL  LLP  P+    H+ +S SS  
Sbjct: 257  VLSDDGVGIWLGKSDPPEDPLTLQVSVPPHQL---RLEKLLPHTPY----HIRISCSSSQ 309

Query: 1237 VNSP 1226
              SP
Sbjct: 310  GPSP 313



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>Q5R896:EVL_PONPY Ena/VASP-like protein - Pongo pygmaeus (Orangutan)|
          Length = 422

 Score = 33.5 bits (75), Expect = 2.9
 Identities = 33/121 (27%), Positives = 46/121 (38%)
 Frame = +1

Query: 916  DMNIEDMMVMEAIWRSIQEQGSIGNPACGSFMPFEQPTRERQAFVAASPLEIPHPGGFSC 1095
            +M+I+   VME   +  QE       A G  +P   P+    A V+ S    P P     
Sbjct: 139  EMDIQRRQVMEQHQQQRQESLERRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPP 198

Query: 1096 AVAAMTEHQPSSMDFSYMTGSSAFPVFDMFRRPCNIAGGSLRAVESSLDSWSGIAPSGTR 1275
                 T   P  +      GSS      +      IAG  LR V+   D+  G +PSGT 
Sbjct: 199  PPTGATPPPPPPLPAGGAQGSS-HDESSVSGLAAAIAGAKLRRVQRPEDASGGSSPSGTS 257

Query: 1276 R 1278
            +
Sbjct: 258  K 258



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>Q8N2I2:ZN619_HUMAN Zinc finger protein 619 - Homo sapiens (Human)|
          Length = 560

 Score = 33.1 bits (74), Expect = 3.8
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
 Frame = -2

Query: 1486 LKKQPWNTSFVLRCSRGENGLQPYCNCQQKATVALSLHPP*CPSRHSLSQPPHPLTSDRL 1307
            ++ Q W+T   L    G + ++PYC C       LS  PP   +  +L+ P  PL+S   
Sbjct: 456  IQHQKWHTRKKLINGTGLSAVKPYCPC-----AILSPLPP-QHTCSALAPPGPPLSSSHA 509

Query: 1306 STLLPLVPFPFWCHLVLSRSSYLVNSP-QHAGFHQQCCTVG 1187
              L P VPF     L+L  S     SP Q A F Q     G
Sbjct: 510  VVLPPSVPF----FLLLPSSEKANPSPVQIAHFFQDLAFPG 546



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>Q6FMP4:TFB3_CANGA RNA polymerase II transcription factor B subunit 3 - Candida|
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 330

 Score = 32.7 bits (73), Expect = 5.0
 Identities = 14/56 (25%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
 Frame = +1

Query: 610 KEERSIEQFEEQKVIEAQMRMRQQALQ---DEEDKMRRKQSRCSSSRTIAPTTEVE 768
           + ++ +E FE+++  E +MRM+++ L+   + EDKM ++ ++      +A +T  +
Sbjct: 160 RSKKDLENFEQRQQFEKEMRMKKRMLERQIESEDKMNKEWAKREIVNRLASSTNAD 215



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>Q9HBL0:TENS1_HUMAN Tensin-1 - Homo sapiens (Human)|
          Length = 1735

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
 Frame = +1

Query: 970  EQGSIGNPACGSFMPFEQPTRERQAFVAASPLEIPHPGGFSCAVAAMTEHQPSSMDFSYM 1149
            E  S   PA        +P+   Q  +A    E PHP        +   H PS M F   
Sbjct: 562  ESASRAGPAHAGHTAPMRPSYSAQEGLAGYQREGPHPAWPQPVTTSHYAHDPSGM-FRSQ 620

Query: 1150 TGSSAFPVFDMFRRPCNIAGGSLR-AVESSLDSW 1248
            + S A P       P  + GGS R AV+  L+SW
Sbjct: 621  SFSEAEPQLP----PAPVRGGSSREAVQRGLNSW 650



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>Q91Z69:SRGP1_MOUSE SLIT-ROBO Rho GTPase-activating protein 1 - Mus musculus (Mouse)|
          Length = 1062

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 562 FCKTPNYAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRK 717
           F K      EY   + KE R+ +  E+QK +E Q  MR Q LQD +D  R+K
Sbjct: 7   FKKDKEIIAEYES-QVKEIRA-QLVEQQKCLEQQTEMRVQLLQDLQDFFRKK 56



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>Q7Z6B7:SRGP1_HUMAN SLIT-ROBO Rho GTPase-activating protein 1 - Homo sapiens (Human)|
          Length = 1085

 Score = 32.3 bits (72), Expect = 6.5
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 562 FCKTPNYAVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRK 717
           F K      EY   + KE R+ +  E+QK +E Q  MR Q LQD +D  R+K
Sbjct: 7   FKKDKEIIAEYES-QVKEIRA-QLVEQQKCLEQQTEMRVQLLQDLQDFFRKK 56



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>A2QE29:SPB4_ASPNG ATP-dependent rRNA helicase spb4 - Aspergillus niger|
          Length = 642

 Score = 32.0 bits (71), Expect = 8.4
 Identities = 17/64 (26%), Positives = 36/64 (56%)
 Frame = +1

Query: 583 AVEYRGVKTKEERSIEQFEEQKVIEAQMRMRQQALQDEEDKMRRKQSRCSSSRTIAPTTE 762
           A + R  K K E+  E+ E QKV+E +  + Q  +++EE+++ R+ ++   S+      +
Sbjct: 577 AKQARQQKDKWEKMTEE-ERQKVLETEKMLEQIRVKNEEERLLRRAAKDKESKAAGGDDD 635

Query: 763 VEYR 774
            E++
Sbjct: 636 DEFK 639



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>Q28EM1:FOXJ2_XENTR Forkhead box protein J2 - Xenopus tropicalis (Western clawed frog)|
            (Silurana tropicalis)
          Length = 512

 Score = 32.0 bits (71), Expect = 8.4
 Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
 Frame = -2

Query: 1582 RAKGEQNNDCAHHNHRVTTMSTLVCAF---YHELLLKKQPWNTSFVLRCSRGENGLQPY- 1415
            RA    NNDC   +   +T   L C+F   YH LL K+       +    + +  L P  
Sbjct: 211  RAPTYNNNDCYKFSFSESTFPDLGCSFRSLYHSLLGKQGERGDKDLYNSMQSKQVLPPVH 270

Query: 1414 --------CNCQQKATVALS-LHPP*CPSRHSLSQPPHP 1325
                    C  QQ +  A S LHP   P   S+S PP P
Sbjct: 271  SEVQSSSCCMYQQNSGAAPSNLHPHNVP---SISGPPPP 306


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 298,844,188
Number of extensions: 6688773
Number of successful extensions: 18264
Number of sequences better than 10.0: 12
Number of HSP's gapped: 18228
Number of HSP's successfully gapped: 12
Length of query: 585
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 466
Effective length of database: 68,045,334
Effective search space: 31709125644
Effective search space used: 31709125644
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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