ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf73d02 |
|---|---|
| Clone Library Name | barley_pub |
>Q10850:Y2006_MYCTU Uncharacterized glycosyl hydrolase Rv2006/MT2062 - Mycobacterium| tuberculosis Length = 1327 Score = 150 bits (379), Expect = 2e-35 Identities = 105/284 (36%), Positives = 149/284 (52%), Gaps = 7/284 (2%) Frame = +2 Query: 800 PSALGSFEAITELARGKRLALFLDYDGTLSPIVDNPANAVMSDEMRAAVRHVASLFPTAI 979 P AL + + L G+R A+FLD+DGTLS IV+ P A + D A+R +A+ P A+ Sbjct: 264 PDALQVYSQLKRLLTGRRPAVFLDFDGTLSDIVERPEAATLVDGAAEALRALAAQCPVAV 323 Query: 980 ISGRSRDKVFDFVKLTELYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQP 1159 ISGR V + VK+ L+ AGSHG +++ P HH + +G Sbjct: 324 ISGRDLADVRNRVKVDGLWLAGSHGFELVAP-----DGSHHQNAAATAAIDG-------- 370 Query: 1160 ASEFLPMIAEVFENLSESIKDIDGARMEDNKFCVSVHYRNVAPHDYETVHQRVTAV--LK 1333 +AE L++++++I GA +E +F V+VHYRNVA ++V + AV L Sbjct: 371 -------LAEAAAQLADALREIAGAVVEHKRFAVAVHYRNVAD---DSVDNLIAAVRRLG 420 Query: 1334 DYPCLRLTHGRKVLEVRPVIDWNKGKAV--XXXXXXXXXXXXDDVLPIYVGDDKTDEDAF 1507 LR+T GRKV+E+RP I W+KGKA+ D LPIY+GDD TDEDAF Sbjct: 421 HAAGLRVTTGRKVVELRPDIAWDKGKALDWIGERLGPAEVGPDLRLPIYIGDDLTDEDAF 480 Query: 1508 KVLKANNHGFGILV---SSVPKDSDAFYSLRDPSEVMEFLKTLA 1630 ++ G GI+V + S A + L P V +FL LA Sbjct: 481 DAVRFT--GVGIVVRHNEHGDRRSAATFRLECPYTVCQFLSQLA 522
>P78875:TPP1_SCHPO Trehalose-phosphatase - Schizosaccharomyces pombe (Fission yeast)| Length = 817 Score = 69.7 bits (169), Expect = 4e-11 Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 19/288 (6%) Frame = +2 Query: 824 AITELARGKRLALFLDYDGTLSPIVDNPANAVMSDEMRAAVRHVAS--LFPTAIISGRSR 997 A++ ++ + +DYDGTL+PIV +P AV S ++ + +A+ IISGR + Sbjct: 555 ALSVYSKASKRLFMMDYDGTLTPIVRDPNAAVPSKKLLDNLATLAADPKNQVWIISGRDQ 614 Query: 998 DKVFDFVKLTELYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEFLP 1177 F++ + MD + + S +G V ST +NL +E L Sbjct: 615 ----QFLR---------NWMDDIKGLGLSAEHGSFVRKPHST----TWINL----AELLD 653 Query: 1178 M-----IAEVFENLSESIKDIDGARMEDNKFCVSVHYRNVAPHDYETVHQRVTAVLKDYP 1342 M + +F+ ++ + G+ +E+ + ++ HYR P + A+L++ Sbjct: 654 MSWKKEVRRIFQYYTDRTQ---GSSIEEKRCAMTWHYRKADPENGAFQALECEALLEELV 710 Query: 1343 C----LRLTHGRKVLEVRPVIDWNKGKAVXXXXXXXXXXXXDDVLPIYV---GDDKTDED 1501 C + + G+ LEVRP NKG V +D LP ++ GDD+TDED Sbjct: 711 CSKYDVEIMRGKANLEVRP-SSINKGGIV----KQILSSYPEDSLPSFIFCAGDDRTDED 765 Query: 1502 AFKVLKANNH-----GFGILVSSVPKDSDAFYSLRDPSEVMEFLKTLA 1630 F+ L N F + + S K S A + + DP+ V++ L LA Sbjct: 766 MFRSLHKNTRINKETSFAVTIGSDKKLSIADWCIADPANVIDILADLA 813
>Q9L894:OTSB_SALTY Trehalose-phosphatase - Salmonella typhimurium| Length = 267 Score = 67.0 bits (162), Expect = 3e-10 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 7/264 (2%) Frame = +2 Query: 857 ALFLDYDGTLSPIVDNPANAVMSDEM-----RAAVRHVASLFPTAIISGRSRDKVFDFVK 1021 A F D DGTL+ I +P V+ ++ R A + +L A+ISGRS ++ K Sbjct: 16 AYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGAL---ALISGRSMTELDALAK 72 Query: 1022 LTELYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEFLPMIAEVFEN 1201 AG HG + R+ + H+ VR ++ +EV Sbjct: 73 PFRFPLAGVHGAE-----RRDINGKTHI--VRLPEAVVREVEAL---------------- 109 Query: 1202 LSESIKDIDGARMEDNKFCVSVHYRNVAPHDYE--TVHQRVTAVLKDYPCLRLTHGRKVL 1375 L ++ + G +E ++HYR H+ + Q VT + +P L L G+ V+ Sbjct: 110 LRSTLVALPGTELESKGMAFALHYRQAPEHEAALLALAQHVT---QHWPQLALQPGKCVV 166 Query: 1376 EVRPVIDWNKGKAVXXXXXXXXXXXXDDVLPIYVGDDKTDEDAFKVLKANNHGFGILVSS 1555 E++P NKG+A+ +P++VGDD TDE F V+ NH GI V Sbjct: 167 EIKPK-GTNKGEAIAAFMQEAPFAGR---IPVFVGDDLTDEAGFGVV---NHAGGISVKV 219 Query: 1556 VPKDSDAFYSLRDPSEVMEFLKTL 1627 + A + L +V +L+ + Sbjct: 220 GVGATQAAWRLESVPDVWRWLEQI 243
>P31678:OTSB_ECOLI Trehalose-phosphatase - Escherichia coli| Length = 266 Score = 63.9 bits (154), Expect = 2e-09 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 5/237 (2%) Frame = +2 Query: 821 EAITELAR-GKRLALFLDYDGTLSPIVDNPANAVMSDEMRAAVRHVASLFP--TAIISGR 991 E +TE + A F D DGTL+ I +P V+ D + ++ +A+ A+ISGR Sbjct: 3 EPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGR 62 Query: 992 SRDKVFDFVKLTELYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEF 1171 S ++ K AG HG + R+ + H+ V D+ +++++ Sbjct: 63 SMVELDALAKPYRFPLAGVHGAE-----RRDINGKTHI--VHLPDAIARDISV------- 108 Query: 1172 LPMIAEVFENLSESIKDIDGARMEDNKFCVSVHYRNVAPHD--YETVHQRVTAVLKDYPC 1345 L I GA +E ++HYR H+ T+ QR+T + +P Sbjct: 109 ---------QLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQI---WPQ 156 Query: 1346 LRLTHGRKVLEVRPVIDWNKGKAVXXXXXXXXXXXXDDVLPIYVGDDKTDEDAFKVL 1516 + L G+ V+E++P +KG+A+ P+++GDD TDE F V+ Sbjct: 157 MALQQGKCVVEIKPR-GTSKGEAIAAFMQEAPFIGRT---PVFLGDDLTDESGFAVV 209
>P31688:TPS2_YEAST Trehalose-phosphatase - Saccharomyces cerevisiae (Baker's yeast)| Length = 896 Score = 62.8 bits (151), Expect = 5e-09 Identities = 112/466 (24%), Positives = 182/466 (39%), Gaps = 49/466 (10%) Frame = +2 Query: 377 KDTHFSLRGLVECSLFHS---SVRHTLLLLFVVRSLTTRLR--GSLVLLMDLKTSHN--- 532 KD + SL + + L S + T L V+S + G+ ++L + S N Sbjct: 427 KDVYLSLLRVADLCLITSVRDGMNTTALEYVTVKSHMSNFLCYGNPLILSEFSGSSNVLK 486 Query: 533 SPVFVDPLPSLALPMTYTTPTSFPSSGLYLNTPKKKPLPSKI--EEVRAAGWLDLMLASS 706 + V+P S+A+ + + L L+ +K L SK+ E W + L+S Sbjct: 487 DAIVVNPWDSVAVAKSI-------NMALKLDKEEKSNLESKLWKEVPTIQDWTNKFLSSL 539 Query: 707 PPRKRQSKDFLPHDVQADDLDLRYRNWMVNYPSALGSFEAITELARGKRLALFLDYDGTL 886 + + DD++ R +N P L +++ + KR DYDGTL Sbjct: 540 KEQASSN----------DDME-RKMTPALNRPVLLENYK------QAKRRLFLFDYDGTL 582 Query: 887 SPIVDNPANAVMSDEMRAAVRHVAS--LFPTAIISGRSRDKVFDFV--KLTELYYAGSHG 1054 +PIV +PA A+ S + ++ + + IISGR + + ++ KL +L + HG Sbjct: 583 TPIVKDPAAAIPSARLYTILQKLCADPHNQIWIISGRDQKFLNKWLGGKLPQLGLSAEHG 642 Query: 1055 MDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEFLPMIAEVFENLSESIKDIDGA 1234 C S VNL + + V E + E G+ Sbjct: 643 ------------------CFMKDVSCQDWVNLTEKVD--MSWQVRVNEVMEEFTTRTPGS 682 Query: 1235 RMEDNKFCVSVHYRNVAPH----DYETVHQRVTAVLKDYPCLRLTHGRKVLEVRPVIDWN 1402 +E K ++ HYR P + + +++ + D+ L + G+ +EVRP N Sbjct: 683 FIERKKVALTWHYRRTVPELGEFHAKELKEKLLSFTDDFD-LEVMDGKANIEVRPRF-VN 740 Query: 1403 KGKAVXXXXXXXXXXXXD-----------DVLPIYV---GDDKTDEDAFKVLKA------ 1522 KG+ V D D +P +V GDD TDED F+ L Sbjct: 741 KGEIVKRLVWHQHGKPQDMLKGISEKLPKDEMPDFVLCLGDDFTDEDMFRQLNTIETCWK 800 Query: 1523 ----------NNHGF-GILVSSVPKDSDAFYSLRDPSEVMEFLKTL 1627 N+GF + V S K + A L DP +V+E L L Sbjct: 801 EKYPDQKNQWGNYGFYPVTVGSASKKTVAKAHLTDPQQVLETLGLL 846
>P55611:OTSB_RHISN Probable trehalose-phosphatase - Rhizobium sp. (strain NGR234)| Length = 265 Score = 58.2 bits (139), Expect = 1e-07 Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 2/260 (0%) Frame = +2 Query: 857 ALFLDYDGTLSPIVDNPANAVMSDEMRAAVRHVASLF--PTAIISGRSRDKVFDFVKLTE 1030 ALFLD DGTL + + P + + A++ H++ A+++GR D Sbjct: 31 ALFLDIDGTLLDLAETPDAVAVPPSLPASLDHLSKKLGGALALVTGRGLDYADQLFSPAN 90 Query: 1031 LYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEFLPMIAEVFENLSE 1210 AG HG + P +G + + D E + L + + Sbjct: 91 FPIAGLHGAERRDP------DGRVHKAAETADFERLKAELVAATASWA------------ 132 Query: 1211 SIKDIDGARMEDNKFCVSVHYRNVAPHDYETVHQRVTAVLKDYPCLRLTHGRKVLEVRPV 1390 G +ED V+ HYR E A+ + P + HG+ V+E+RP Sbjct: 133 ------GVLIEDKGAAVAAHYRLAPDRQLELEQLMEWALYRAGPDWAIQHGKMVVEIRPA 186 Query: 1391 IDWNKGKAVXXXXXXXXXXXXDDVLPIYVGDDKTDEDAFKVLKANNHGFGILVSSVPKDS 1570 NKG AV I +GDD TDE F+ + G I + S Sbjct: 187 -RANKGDAVAAFLGQPPFAGR---RAIAIGDDVTDEAMFRTVNRLG-GLSIRIGPPVPAS 241 Query: 1571 DAFYSLRDPSEVMEFLKTLA 1630 +A S+ + + LA Sbjct: 242 EALGSIPSAEALRGIIAALA 261
>Q8SSL0:TPP_ENCCU Probable trehalose-phosphatase - Encephalitozoon cuniculi| Length = 718 Score = 53.5 bits (127), Expect = 3e-06 Identities = 66/271 (24%), Positives = 104/271 (38%), Gaps = 4/271 (1%) Frame = +2 Query: 827 ITELARGKRLALFLDYDGTLSPIVDNPANAVMSDEMRAAVRHVASLFPTAIISGRSRDKV 1006 + + + K L +DYDGTL+ IV P A + E++ + + + I +GRS + Sbjct: 494 VNDFKKSKARTLVMDYDGTLTNIVARPPMAAPTQEIKDLLIRLGKICRVVISTGRSVEDC 553 Query: 1007 FDFVKLTELYYAGSHGMDIMGPIRKSESNGHHVECVRSTDSEGKEVNLFQPASEFLPMIA 1186 F ++ E H C R D + KE F P + I Sbjct: 554 DKFFP------------------KEIEVFAEHGACHR-IDGKWKEGGTF-PQKDLAWRIG 593 Query: 1187 EVFENLSESIKDIDGARMEDNKFCVSVHYRNVAP----HDYETVHQRVTAVLKDYPCLRL 1354 + F + G+ +E K + H+RNV+P + + + V KDY + Sbjct: 594 QFF------LARTPGSELERKKTGYAFHFRNVSPLIGVKQARALFELLMRVCKDY----V 643 Query: 1355 THGRKVLEVRPVIDWNKGKAVXXXXXXXXXXXXDDVLPIYVGDDKTDEDAFKVLKANNHG 1534 G V+EVR K A+ ++ + GDD DED F V K G Sbjct: 644 KKGNHVIEVR---SSKKSCAM---------EKIEEGFVLCAGDDVADEDMFDVCK----G 687 Query: 1535 FGILVSSVPKDSDAFYSLRDPSEVMEFLKTL 1627 + I V + + A Y ++DP L L Sbjct: 688 YTIKVGD--QSTSAAYRVKDPENFRMLLGRL 716
>Q8WXE1:ATRIP_HUMAN ATR-interacting protein - Homo sapiens (Human)| Length = 791 Score = 33.5 bits (75), Expect = 3.2 Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Frame = -1 Query: 584 CTS*ARLVKGEDQQKQESCGLSSSPSTEQDFPSVLLSNYELRTAKVECAGLKNETENTQP 405 C + AR V + + + G+S +PS + + N+EL + + LK + + + Sbjct: 74 CPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQAQYKELKEKMKVMEE 133 Query: 404 TLLMKN-ECLFVTTNVHETHPTQQARRPCIRLISSKRKARVSD 279 +L+KN E + ++H+T + +R L+ ++ +SD Sbjct: 134 EVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSD 176
>Q04336:YM54_YEAST Uncharacterized protein YMR196W - Saccharomyces cerevisiae (Baker's| yeast) Length = 1088 Score = 32.3 bits (72), Expect = 7.2 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = +2 Query: 1121 TDSEGKEVNLFQPASEFLPMIAEVFEN-LSESIKDIDGARMEDNKFCVSVHYRNVAPHDY 1297 TD+E V LF + FE L + D + K C H++N+ P +Y Sbjct: 295 TDNESNLVKLFNEEKNPSEYTKDAFEEYLVQGKTDAVNPENKGTKACAVYHFKNIPPGEY 354 Query: 1298 ETVHQRVT 1321 TV + T Sbjct: 355 VTVRYKFT 362
>O13892:YE38_SCHPO Uncharacterized protein C20G4.08 - Schizosaccharomyces pombe| (Fission yeast) Length = 1076 Score = 32.0 bits (71), Expect = 9.4 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 566 ALPMTYTTPTSFPSSGLYLNTPKKKPLPSKIEEV 667 AL YT PT+FPS TP K+P+PS++ + Sbjct: 426 ALIKIYTVPTTFPS------TPDKRPVPSEVSPI 453 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 317,914,575 Number of extensions: 7068306 Number of successful extensions: 17865 Number of sequences better than 10.0: 10 Number of HSP's gapped: 17839 Number of HSP's successfully gapped: 10 Length of query: 639 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 519 Effective length of database: 67,771,039 Effective search space: 35173169241 Effective search space used: 35173169241 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
