ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf82i04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829001.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125H14, full insert sequence Length = 1045 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 658 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 717 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 718 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 760 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 601 ggtgcggaacgcgtaccacaccaagtac 628 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 790 cggcggcatcggcatgacccgcat 813
>emb|CT829000.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004D02, full insert sequence Length = 685 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 319 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 378 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 379 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 421 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 262 ggtgcggaacgcgtaccacaccaagtac 289 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 451 cggcggcatcggcatgacccgcat 474
>ref|NM_001060806.1| Oryza sativa (japonica cultivar-group) Os04g0678200 (Os04g0678200) mRNA, complete cds Length = 1034 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 587 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 646 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 647 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 689 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 530 ggtgcggaacgcgtaccacaccaagtac 557 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 719 cggcggcatcggcatgacccgcat 742
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 77440 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 77499 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 77500 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 77542 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 77383 ggtgcggaacgcgtaccacaccaagtac 77410 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 77572 cggcggcatcggcatgacccgcat 77595
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 22536 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 22595 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 22596 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 22638 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 22479 ggtgcggaacgcgtaccacaccaagtac 22506 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 22668 cggcggcatcggcatgacccgcat 22691
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 34679198 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 34679257 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 34679258 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 34679300 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 34679141 ggtgcggaacgcgtaccacaccaagtac 34679168 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 34679330 cggcggcatcggcatgacccgcat 34679353 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 703527 gcgtgtgcgtgtgcgtgtgg 703508 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gccgccggcgccgccttcgccttc 112 |||||||| ||||||||||||||| Sbjct: 10992233 gccgccggtgccgccttcgccttc 10992210 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 21341566 gcgtgtgcgtgtgcgtgtgg 21341547
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 133319 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 133378 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 133379 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 133421 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 133262 ggtgcggaacgcgtaccacaccaagtac 133289 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 133451 cggcggcatcggcatgacccgcat 133474
>dbj|AK106193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E04, full insert sequence Length = 1034 Score = 117 bits (59), Expect = 4e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 61 ctgcgccatgctgcgcaggggcgtcttcgccgccggcgccgccttcgccttcctcaccac 120 |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 587 ctgcgcgatgctgcgcaagggcgtgttcgccgccggcgccgccttcaccttcctcaccgc 646 Query: 121 gctcttcgtcatgctccactacgtcttctactccaaggcccgc 163 |||||||| | |||||||||| |||||| | ||||||||||| Sbjct: 647 gctcttcgccgagctccactacctcttcttcgccaaggcccgc 689 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1 ggtgcggaacgcataccacaccaagtac 28 |||||||||||| ||||||||||||||| Sbjct: 530 ggtgcggaacgcgtaccacaccaagtac 557 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggcggcatcggcatgacccgcat 213 |||||||||||||||||||||||| Sbjct: 719 cggcggcatcggcatgacccgcat 742
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 82 cgtcttcgccgccggcgccgccttcg 107 |||||||||||||||||||||||||| Sbjct: 102084 cgtcttcgccgccggcgccgccttcg 102059
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 82 cgtcttcgccgccggcgccgccttcg 107 |||||||||||||||||||||||||| Sbjct: 25834121 cgtcttcgccgccggcgccgccttcg 25834146 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 25467755 gcccgcgccgcgccgccgcc 25467774 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 27520132 gcccgcgccgcgccgccgcc 27520113 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 30116973 tcatcaacggcggcggcatc 30116992 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 33092056 gggcttcttggccgccggcgccgccttc 33092029
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 tcgccgccggcgccgccttcgcc 109 ||||||||||||||||||||||| Sbjct: 4780251 tcgccgccggcgccgccttcgcc 4780229 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatca 182 |||||||||||||||||||| Sbjct: 37241 cgccgcgccgccgcccatca 37260
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtggct 271 ||||||||||||||||||||||| Sbjct: 21831010 ggcgtgtgcgtgtgcgtgtggct 21831032
>gb|DQ813491.1| Uncultured organism clone 22 genomic sequence Length = 1584 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 85 cttcgccgccggcgccgccttcg 107 ||||||||||||||||||||||| Sbjct: 921 cttcgccgccggcgccgccttcg 899
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 tcgccgccggcgccgccttcgcc 109 ||||||||||||||||||||||| Sbjct: 3922227 tcgccgccggcgccgccttcgcc 3922205
>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence Length = 170327 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtggct 271 ||||||||||||||||||||||| Sbjct: 73837 ggcgtgtgcgtgtgcgtgtggct 73859
>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence Length = 179099 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtggct 271 ||||||||||||||||||||||| Sbjct: 121712 ggcgtgtgcgtgtgcgtgtggct 121734
>gb|AE012473.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 381 of 460 of the complete genome Length = 11134 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 157 ggcccgcgccgcgccgccgccca 179 ||||||||||||||||||||||| Sbjct: 2541 ggcccgcgccgcgccgccgccca 2519
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 ggcccgcgccgcgccgccgccca 179 ||||||||||||||||||||||| Sbjct: 754692 ggcccgcgccgcgccgccgccca 754714 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 cgccgccggcgccgccttcgcc 109 |||||||||||||||||||||| Sbjct: 1359555 cgccgccggcgccgccttcgcc 1359534
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 tcgccgccggcgccgccttcgcc 109 ||||||||||||||||||||||| Sbjct: 111227 tcgccgccggcgccgccttcgcc 111205
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 87 tcgccgccggcgccgccttcgcc 109 ||||||||||||||||||||||| Sbjct: 122882 tcgccgccggcgccgccttcgcc 122860
>emb|AL596255.17| Mouse DNA sequence from clone RP23-6K20 on chromosome 11 Contains the 3' end of the Myh13 gene for skeletal muscle myosin heavy polypeptide 13, the 5' end of the Gas7 gene for growth arrest specific 7, a novel gene and a CpG island, complete sequence Length = 251096 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 agctgaaggtagatcaggaaggg 388 ||||||||||||||||||||||| Sbjct: 60499 agctgaaggtagatcaggaaggg 60521
>ref|NM_001073383.1| Oryza sativa (japonica cultivar-group) Os12g0508300 (Os12g0508300) mRNA, complete cds Length = 457 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 cgccgccggcgccgccttcgccttcc 113 |||||||| ||||||||||||||||| Sbjct: 81 cgccgccgccgccgccttcgccttcc 56
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 153 ccaaggcccgcgccgcgccgccgccc 178 ||||| |||||||||||||||||||| Sbjct: 3852032 ccaagacccgcgccgcgccgccgccc 3852007
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 ggcccgcgccgcgccgccgcccatca 182 ||||| |||||||||||||||||||| Sbjct: 8845851 ggcccccgccgcgccgccgcccatca 8845876
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 tcttcgccgccggcgccgccttcgcc 109 ||||||||||| |||||||||||||| Sbjct: 846448 tcttcgccgccagcgccgccttcgcc 846423 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 3010791 gcccgcgccgcgccgccgcc 3010772
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 tcgccgccggcgccgccttcgc 108 |||||||||||||||||||||| Sbjct: 4715525 tcgccgccggcgccgccttcgc 4715504
>gb|AE012417.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 325 of 460 of the complete genome Length = 10774 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcgcc 109 |||||||||||||||||||||| Sbjct: 1297 cgccgccggcgccgccttcgcc 1318
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 cgccgccggcgccgccttcgccttcc 113 |||||||| ||||||||||||||||| Sbjct: 19577500 cgccgccgccgccgccttcgccttcc 19577475
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 tcgccgccggcgccgccttcgc 108 |||||||||||||||||||||| Sbjct: 236877 tcgccgccggcgccgccttcgc 236898
>dbj|AK059123.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F08, full insert sequence Length = 457 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 cgccgccggcgccgccttcgccttcc 113 |||||||| ||||||||||||||||| Sbjct: 81 cgccgccgccgccgccttcgccttcc 56
>dbj|AP006388.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39K18, TM0252d, complete sequence Length = 35261 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 aattacattgtactagtattaa 546 |||||||||||||||||||||| Sbjct: 25521 aattacattgtactagtattaa 25542
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 88 cgccgccggcgccgccttcgccttcc 113 |||||||| ||||||||||||||||| Sbjct: 109681 cgccgccgccgccgccttcgccttcc 109656
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cttcgccgccggcgccgccttcgcc 109 |||||||| |||||||||||||||| Sbjct: 2150866 cttcgccgtcggcgccgccttcgcc 2150890
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cgtcttcgccgccggcgccgc 102 ||||||||||||||||||||| Sbjct: 7494825 cgtcttcgccgccggcgccgc 7494805
>ref|NM_001066414.1| Oryza sativa (japonica cultivar-group) Os07g0538200 (Os07g0538200) mRNA, complete cds Length = 2382 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 668 gtcttcgccgccggcgccgcc 648
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 gcccgcgccgcgccgccgccc 178 ||||||||||||||||||||| Sbjct: 138302 gcccgcgccgcgccgccgccc 138282
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ggcccgcgccgcgccgccgcc 177 ||||||||||||||||||||| Sbjct: 21585718 ggcccgcgccgcgccgccgcc 21585738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ccactacgtcttctactcca 155 |||||||||||||||||||| Sbjct: 17173652 ccactacgtcttctactcca 17173633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 21104550 gtcttcgccgccggcgccgcc 21104570 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcgcctt 111 |||||||| ||||||||||||||| Sbjct: 1204665 cgccgccgccgccgccttcgcctt 1204688
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ggcccgcgccgcgccgccgcc 177 ||||||||||||||||||||| Sbjct: 24339 ggcccgcgccgcgccgccgcc 24319
>gb|AC158637.3| Mus musculus 10 BAC RP24-79K22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cggcgtgtgcgtgtgcgtgtg 268 ||||||||||||||||||||| Sbjct: 190726 cggcgtgtgcgtgtgcgtgtg 190746
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ggcccgcgccgcgccgccgcc 177 ||||||||||||||||||||| Sbjct: 17622 ggcccgcgccgcgccgccgcc 17642
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 caacggcggcggcatcggcat 204 ||||||||||||||||||||| Sbjct: 245814 caacggcggcggcatcggcat 245794
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 147849 gtcttcgccgccggcgccgcc 147869
>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0696F12 Length = 165227 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 25911 gtcttcgccgccggcgccgcc 25931
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 gccgcccatcatcaacggcggcggc 196 |||| |||||||||||||||||||| Sbjct: 7769730 gccggccatcatcaacggcggcggc 7769706
>dbj|AK103518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131H17, full insert sequence Length = 2383 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 669 gtcttcgccgccggcgccgcc 649
>dbj|AK102249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088G15, full insert sequence Length = 2253 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 gtcttcgccgccggcgccgcc 103 ||||||||||||||||||||| Sbjct: 539 gtcttcgccgccggcgccgcc 519
>gb|AC153534.2| Mus musculus 10 BAC RP23-360K7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207306 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cggcgtgtgcgtgtgcgtgtg 268 ||||||||||||||||||||| Sbjct: 24248 cggcgtgtgcgtgtgcgtgtg 24268
>ref|NM_001014182.1| Rattus norvegicus mal, T-cell differentiation protein-like (Mall), mRNA gb|BC090079.1| Rattus norvegicus mal, T-cell differentiation protein-like, mRNA (cDNA clone MGC:95101 IMAGE:7126923), complete cds Length = 1804 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 cttcgccttcctcaccacgct 123 ||||||||||||||||||||| Sbjct: 435 cttcgccttcctcaccacgct 455
>gb|AY106198.1| Zea mays PCO097929 mRNA sequence Length = 695 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gaacgcataccacaccaagta 27 ||||||||||||||||||||| Sbjct: 443 gaacgcataccacaccaagta 463
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 cttcgccgccggcgccgccttcgcc 109 |||||||| |||||||||||||||| Sbjct: 2253099 cttcgccgtcggcgccgccttcgcc 2253075
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gcgtcttcgccgccggcgccg 101 ||||||||||||||||||||| Sbjct: 724822 gcgtcttcgccgccggcgccg 724842
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtgg 269 ||||||||||||||||||||| Sbjct: 915857 ggcgtgtgcgtgtgcgtgtgg 915877
>emb|CU041292.6| Human DNA sequence from clone XX-DSH1_29E11, complete sequence Length = 112322 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ccatgatctccatcttccct 447 |||||||||||||||||||| Sbjct: 24954 ccatgatctccatcttccct 24973
>emb|CT829525.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA033E02, full insert sequence Length = 1393 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 899 gggcttcttggccgccggcgccgccttc 872
>emb|CT831507.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA010G09, full insert sequence Length = 933 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 454 cgccgccttcgccttcctca 435
>emb|CR854994.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0127D24, complete sequence Length = 102878 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 90028 gcgtgtgcgtgtgcgtgtgg 90009
>emb|CR855094.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0222C05, complete sequence Length = 37743 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 26307 gcgtgtgcgtgtgcgtgtgg 26288
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 cgccggcgccgccttcgcct 110 |||||||||||||||||||| Sbjct: 838535 cgccggcgccgccttcgcct 838516
>dbj|AK238498.1| Sus scrofa mRNA, clone:TES010043A10, expressed in testis Length = 1460 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggcccgcgccgcgccgccgc 176 |||||||||||||||||||| Sbjct: 34 ggcccgcgccgcgccgccgc 53
>dbj|AK235042.1| Sus scrofa mRNA, clone:OVRM10044B06, expressed in ovary Length = 2748 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 26 cgccgcgccgtcgcccatcatcaa 49
>ref|NM_001071377.1| Oryza sativa (japonica cultivar-group) Os10g0475100 (Os10g0475100) mRNA, complete cds Length = 534 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccactacgtcttctactcca 155 |||||||||||||||||||| Sbjct: 495 ccactacgtcttctactcca 514
>ref|NM_001062735.1| Oryza sativa (japonica cultivar-group) Os05g0543000 (Os05g0543000) mRNA, complete cds Length = 922 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 454 cgccgccttcgccttcctca 435
>ref|NM_001058108.1| Oryza sativa (japonica cultivar-group) Os03g0799000 (Os03g0799000) mRNA, complete cds Length = 1386 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 894 gggcttcttggccgccggcgccgccttc 867
>ref|NM_001057747.1| Oryza sativa (japonica cultivar-group) Os03g0738600 (Os03g0738600) mRNA, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 1829 tcatcaacggcggcggcatc 1848
>ref|NM_001057495.1| Oryza sativa (japonica cultivar-group) Os03g0692500 (Os03g0692500) mRNA, complete cds Length = 1728 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 8 gcccgcgccgcgccgccgcc 27
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcg 107 |||||||||||||||||||| Sbjct: 2783416 cgccgccggcgccgccttcg 2783435
>ref|XM_001155654.1| PREDICTED: Pan troglodytes similar to DSLR655, transcript variant 2 (LOC740718), mRNA Length = 2855 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccgccggcgccgccttcgcc 109 |||||||||||||||||||| Sbjct: 2576 ccgccggcgccgccttcgcc 2557
>ref|XM_001155585.1| PREDICTED: Pan troglodytes similar to DSLR655, transcript variant 1 (LOC740718), mRNA Length = 1929 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccgccggcgccgccttcgcc 109 |||||||||||||||||||| Sbjct: 1650 ccgccggcgccgccttcgcc 1631
>gb|CP000449.1| Maricaulis maris MCS10, complete genome Length = 3368780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caacggcggcggcatcggca 203 |||||||||||||||||||| Sbjct: 476872 caacggcggcggcatcggca 476891
>gb|DQ895138.1| Homo sapiens clone FLH181713.01L; RZPDo839G05135D MMP2 mRNA, partial sequence Length = 1983 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 84 cgccgcgccgtcgcccatcatcaa 107
>gb|DQ891952.1| Synthetic construct Homo sapiens clone FLH181717.01X; RZPDo839G05136D MMP2 mRNA, complete sequence Length = 1983 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 84 cgccgcgccgtcgcccatcatcaa 107
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 573826 ccatcatcaacggcggcggc 573845
>tpg|BK001429.1| TPA_exp: Homo sapiens NOELIN3 (OLFM3) gene, complete cds; alternatively spliced Length = 195421 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 153988 gcgtgtgcgtgtgcgtgtgg 153969
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 gccgccttcgccttcctcaccacg 121 |||||||||| ||||||||||||| Sbjct: 1971538 gccgccttcggcttcctcaccacg 1971561
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 cgccggcgccgccttcgcct 110 |||||||||||||||||||| Sbjct: 4684155 cgccggcgccgccttcgcct 4684174
>gb|AC184055.3| Pan troglodytes BAC clone CH251-635D2 from chromosome 12, complete sequence Length = 227697 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ttctgtcggagtgagcagct 369 |||||||||||||||||||| Sbjct: 13631 ttctgtcggagtgagcagct 13650
>gb|AC187705.1| Gasterosteus aculeatus clone VMRC28-105C14, complete sequence Length = 151567 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 36960 ggcgtgtgcgtgtgcgtgtg 36979
>ref|XM_001087939.1| PREDICTED: Macaca mulatta similar to matrix metalloproteinase 2 preproprotein, transcript variant 4 (LOC698478), mRNA Length = 3773 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 618 cgccgcgccgtcgcccatcatcaa 641
>gb|AC186635.1| Phycomyces blakesleeanus clone JGIBHUS-5E9, complete sequence Length = 35155 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 28496 ggcgtgtgcgtgtgcgtgtg 28515
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcg 107 |||||||||||||||||||| Sbjct: 446397 cgccgccggcgccgccttcg 446416 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgcatcgccggcgagac 240 |||||||||||||||||||| Sbjct: 2337048 cgccgcatcgccggcgagac 2337029
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcg 98 |||||||||||||||||||| Sbjct: 3296472 gggcgtcttcgccgccggcg 3296453
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 4829111 gcccgcgccgcgccgccgcc 4829130
>emb|AJ271327.2|OSA271327 Oryza sativa mRNA for hypothetical protein (ORF1) Length = 1026 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 446 cgccgccttcgccttcctca 427
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 34485 gcgtgtgcgtgtgcgtgtgg 34466
>gb|AC103673.8| Mus musculus chromosome 1, clone RP24-336F10, complete sequence Length = 187158 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 123179 ggcgtgtgcgtgtgcgtgtg 123198
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 210624 gcgtgtgcgtgtgcgtgtgg 210643
>gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome 17, complete sequence Length = 202649 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 116075 ggcgtgtgcgtgtgcgtgtg 116094
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 1057990 gcgtgtgcgtgtgcgtgtgg 1057971
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 gtgtgcgtgtgcgtgtggctccga 275 ||||||||||||||||| |||||| Sbjct: 113932 gtgtgcgtgtgcgtgtgcctccga 113955
>gb|AC119406.6| Trypanosoma brucei chromosome 8 clone RPCI93-28L1, complete sequence Length = 134874 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 55280 ggcgtgtgcgtgtgcgtgtg 55299
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ccatgatctccatcttccct 447 |||||||||||||||||||| Sbjct: 89853 ccatgatctccatcttccct 89872
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 24416 cgccgccttcgccttcctca 24397
>gb|AY738117.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2) gene, complete cds Length = 31017 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 2339 cgccgcgccgtcgcccatcatcaa 2362
>ref|XM_592304.2| PREDICTED: Bos taurus similar to flightless I homolog, transcript variant 1 (LOC514446), mRNA Length = 4803 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 4051 gcgtgtgcgtgtgcgtgtgg 4032
>ref|XM_879707.1| PREDICTED: Bos taurus similar to flightless I homolog, transcript variant 4 (LOC514446), mRNA Length = 2896 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 2144 gcgtgtgcgtgtgcgtgtgg 2125
>ref|XM_879682.1| PREDICTED: Bos taurus similar to flightless I homolog, transcript variant 3 (LOC514446), mRNA Length = 1737 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 985 gcgtgtgcgtgtgcgtgtgg 966
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 129016 gcccgcgccgcgccgccgcc 128997
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcttcgccgccggcgccgcc 103 |||||||||||||||||||| Sbjct: 397317 tcttcgccgccggcgccgcc 397298
>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence Length = 209326 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 55949 ggcgtgtgcgtgtgcgtgtg 55968
>gb|AC133156.7| Mus musculus chromosome 15, clone RP24-291M22, complete sequence Length = 151577 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 40752 gcgtgtgcgtgtgcgtgtgg 40733
>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence Length = 171125 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 112588 gcgtgtgcgtgtgcgtgtgg 112569
>gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, complete sequence Length = 163965 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 74240 ggcgtgtgcgtgtgcgtgtg 74221
>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence Length = 195767 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 gaaggtagatcaggaaggga 389 |||||||||||||||||||| Sbjct: 90358 gaaggtagatcaggaaggga 90339
>gb|AC127296.4| Mus musculus BAC clone RP23-395A17 from chromosome 7, complete sequence Length = 205162 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 31062 ggcgtgtgcgtgtgcgtgtg 31043
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence Length = 174764 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 39179 gcgtgtgcgtgtgcgtgtgg 39160
>gb|AC122422.4| Mus musculus BAC clone RP24-169N11 from chromosome 17, complete sequence Length = 181626 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 133045 ggcgtgtgcgtgtgcgtgtg 133064
>ref|NM_167834.1| Drosophila melanogaster CG17090-RB, transcript variant B (CG17090), mRNA Length = 6295 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 4220 ccatcatcaacggcggcggc 4239
>ref|NM_138194.2| Drosophila melanogaster CG17090-RA, transcript variant A (CG17090), mRNA Length = 6215 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 4140 ccatcatcaacggcggcggc 4159
>gb|BC002576.2| Homo sapiens matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase), mRNA (cDNA clone MGC:2313 IMAGE:3161383), complete cds Length = 3065 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 350 cgccgcgccgtcgcccatcatcaa 373
>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence Length = 190325 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 55351 ggcgtgtgcgtgtgcgtgtg 55370
>gb|AY316300.1| Equine coronavirus NC99 hemagglutinin-esterase protein (HE), spike protein (S), 5.3 kDa nonstructural protein, 12.7 kDa protein, small envelope protein (E), and triple spanning membrane protein (M) genes, complete cds Length = 6915 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 tgtactagtattaatattag 552 |||||||||||||||||||| Sbjct: 5488 tgtactagtattaatattag 5469
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaacggc 190 ||||||||| || ||||||||||||||| Sbjct: 2586337 cgccgcgcccccccccatcatcaacggc 2586364
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 3563443 ccatcatcaacggcggcggc 3563424
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 ctccaaggcccgcgccgcgccgccgccc 178 ||||| |||||| ||||||||||||||| Sbjct: 437191 ctccagggcccgggccgcgccgccgccc 437218 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcgtcttcgccgccggcgccgcc 103 ||||||||||||||||||| |||| Sbjct: 3095083 ggcgtcttcgccgccggcgacgcc 3095060
>gb|AC091503.2| Rattus norvegicus strain Brown Norway clone RP31-446A15, complete sequence Length = 178963 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 63017 gcgtgtgcgtgtgcgtgtgg 63036
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 66914 gcccgcgccgcgccgccgcc 66895
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gggcgtcttcgccgccggcg 98 |||||||||||||||||||| Sbjct: 3769233 gggcgtcttcgccgccggcg 3769252
>ref|NM_004530.2| Homo sapiens matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2), mRNA Length = 3546 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 388 cgccgcgccgtcgcccatcatcaa 411
>gb|AY789003.1| Diaprepes abbreviatus clone DP1-G2 microsatellite sequence Length = 536 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 274 ggcgtgtgcgtgtgcgtgtg 293
>gb|AY788999.1| Diaprepes abbreviatus clone DP1-A12 microsatellite sequence Length = 561 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 232 ggcgtgtgcgtgtgcgtgtg 251
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 82200 tcatcaacggcggcggcatc 82181
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 cgccggcgccgccttcgccttcct 114 ||||| |||||||||||||||||| Sbjct: 3691569 cgccgtcgccgccttcgccttcct 3691546
>ref|XM_756076.1| Ustilago maydis 521 hypothetical protein (UM05022.1) partial mRNA Length = 5004 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 4408 gcgtgtgcgtgtgcgtgtgg 4389
>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164597 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 88667 ccatcatcaacggcggcggc 88686
>gb|AE005881.1| Caulobacter crescentus CB15 section 207 of 359 of the complete genome Length = 11854 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 7622 tcatcaacggcggcggcatc 7603
>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence Length = 165658 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ttctgtcggagtgagcagct 369 |||||||||||||||||||| Sbjct: 60348 ttctgtcggagtgagcagct 60367
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcg 98 |||||||||||||||||||| Sbjct: 247947 gggcgtcttcgccgccggcg 247928
>dbj|AK090121.1| Mus musculus bone marrow stroma cell CRL-2028 SR-4987 cDNA, RIKEN full-length enriched library, clone:G431001G23 product:unclassifiable, full insert sequence Length = 8936 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccgcgccgcgccgccgccc 178 |||||||||||||||||||| Sbjct: 213 cccgcgccgcgccgccgccc 232
>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1, complete sequence Length = 224487 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 74338 ggcgtgtgcgtgtgcgtgtg 74357
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 155040 gcgtgtgcgtgtgcgtgtgg 155021
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 gccgccggcgccgccttcgccttcctca 116 |||||||||||||||| | ||||||||| Sbjct: 22064036 gccgccggcgccgcctaccccttcctca 22064063
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 26742477 cgccgccttcgccttcctca 26742458
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 3764 tcatcaacggcggcggcatc 3783
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 1800 tcatcaacggcggcggcatc 1819
>emb|BX908797.10| Zebrafish DNA sequence from clone DKEY-43P13 in linkage group 3, complete sequence Length = 222385 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 144584 gcgtgtgcgtgtgcgtgtgg 144603
>emb|AL391863.21| Human DNA sequence from clone RP11-52J3 on chromosome 6 Contains the 5' end of the SNX9 gene for sorting nexin 9 (SH3 and PX domain-containing protein (SH3PX1, SDP1), FLJ22984) and two novel genes. Contains a CpG island, complete sequence Length = 122556 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccgcgccgcgccgccgccc 178 |||||||||||||||||||| Sbjct: 57578 cccgcgccgcgccgccgccc 57597
>gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, complete sequence Length = 176117 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 56853 cgccgcgccgtcgcccatcatcaa 56830
>emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on chromosome 9, complete sequence Length = 126815 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ccatgatctccatcttccct 447 |||||||||||||||||||| Sbjct: 38592 ccatgatctccatcttccct 38611
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 76966 gcccgcgccgcgccgccgcc 76985
>ref|NM_214192.1| Sus scrofa gelatinase A (MMP-2), mRNA gb|AF295805.1|AF295805 Sus scrofa gelatinase A (MMP-2) mRNA, complete cds Length = 2857 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 135 cgccgcgccgtcgcccatcatcaa 158
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccactacgtcttctactcca 155 |||||||||||||||||||| Sbjct: 73948 ccactacgtcttctactcca 73967
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccactacgtcttctactcca 155 |||||||||||||||||||| Sbjct: 18684 ccactacgtcttctactcca 18703
>emb|BX927411.8| Zebrafish DNA sequence from clone DKEY-5N4 in linkage group 19, complete sequence Length = 93765 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 66392 ggcgtgtgcgtgtgcgtgtg 66411
>gb|AC153419.13| Mus musculus 10 BAC RP23-291D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199606 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 157016 ggcgtgtgcgtgtgcgtgtg 157035
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 cttcgccgccggcgccgccttcgc 108 |||||||| ||||||||||||||| Sbjct: 63070 cttcgccggcggcgccgccttcgc 63047
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cccgcgccgcgccgccgccc 178 |||||||||||||||||||| Sbjct: 701270 cccgcgccgcgccgccgccc 701289
>gb|AC146911.11| Mus musculus chromosome 15, clone RP24-326O2, complete sequence Length = 194421 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 gtcggagtgagcagctgaag 373 |||||||||||||||||||| Sbjct: 72333 gtcggagtgagcagctgaag 72352
>emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosmid contig 64C2 Length = 81866 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gccttcgccttcctcaccac 120 |||||||||||||||||||| Sbjct: 61280 gccttcgccttcctcaccac 61299
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cggcggcggcatcggcatga 206 |||||||||||||||||||| Sbjct: 67943 cggcggcggcatcggcatga 67924
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgcgccgccgcccatcatca 185 |||||||||||||||||||| Sbjct: 203452 cgcgccgccgcccatcatca 203433
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 cgcgccgccgcccatcatca 185 |||||||||||||||||||| Sbjct: 327497 cgcgccgccgcccatcatca 327478
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgcgccgccgcccatcatca 185 |||||||||||||||||||| Sbjct: 276403 cgcgccgccgcccatcatca 276422
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gccgccggcgccgccttcgccttc 112 |||||||| ||||||||||||||| Sbjct: 888 gccgccggtgccgccttcgccttc 865
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10, complete sequence Length = 105538 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 15667 gcgtgtgcgtgtgcgtgtgg 15648
>emb|AL049768.2|LMFL6586 Leishmania major Friedlin chromosome 23 cosmid L6586 Length = 40064 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 153 gcgtgtgcgtgtgcgtgtgg 172
>gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209293 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 208609 ggcgtgtgcgtgtgcgtgtg 208590
>emb|BX957231.6| Zebrafish DNA sequence from clone DKEY-10O22 in linkage group 23, complete sequence Length = 115957 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 70072 gcgtgtgcgtgtgcgtgtgg 70053
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence Length = 175021 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cccgcgccgcgccgccgccc 178 |||||||||||||||||||| Sbjct: 76427 cccgcgccgcgccgccgccc 76408
>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence Length = 206481 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 15574 ggcgtgtgcgtgtgcgtgtg 15593
>gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, complete sequence Length = 193963 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 95017 cgccgcgccgtcgcccatcatcaa 95040
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 1697 tcatcaacggcggcggcatc 1716
>gb|AF490843.1| Homo sapiens clone PAC 70L19, HOXC gene cluster Length = 152740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ttctgtcggagtgagcagct 369 |||||||||||||||||||| Sbjct: 31010 ttctgtcggagtgagcagct 31029
>emb|CR608838.1| full-length cDNA clone CS0DI072YK17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2895 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 227 cgccgcgccgtcgcccatcatcaa 250
>ref|NM_174745.2| Bos taurus matrix metalloproteinase 2 (72 KDa type IV collagenase) (MMP2), mRNA gb|AF290428.1|AF290428 Bos taurus matrix metalloprotease 2 mRNA, complete cds Length = 2350 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 268 cgccgcgccgtcgcccatcatcaa 291
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgcgccgcgccgccgcc 177 |||||||||||||||||||| Sbjct: 121705 gcccgcgccgcgccgccgcc 121724
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 121762 gggcttcttggccgccggcgccgccttc 121789
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 actacgccgacgcgccgctc 58 |||||||||||||||||||| Sbjct: 458579 actacgccgacgcgccgctc 458560 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aggcccgcgccgcgccgccg 175 |||||||||||||||||||| Sbjct: 4715798 aggcccgcgccgcgccgccg 4715817
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ttctgtcggagtgagcagct 369 |||||||||||||||||||| Sbjct: 90834 ttctgtcggagtgagcagct 90853
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 gccgccggcgccgccttcgccttcctca 116 |||||||||||||||| | ||||||||| Sbjct: 101909 gccgccggcgccgcctaccccttcctca 101936
>gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence Length = 207865 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 131118 ggcgtgtgcgtgtgcgtgtg 131099
>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence Length = 208592 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ttctgtcggagtgagcagct 369 |||||||||||||||||||| Sbjct: 100834 ttctgtcggagtgagcagct 100853
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcgcctt 111 |||||||| ||||||||||||||| Sbjct: 106272 cgccgccgccgccgccttcgcctt 106295
>gb|AY069587.1| Drosophila melanogaster LD33388 full insert cDNA Length = 2917 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccatcatcaacggcggcggc 196 |||||||||||||||||||| Sbjct: 1612 ccatcatcaacggcggcggc 1631
>ref|XM_955675.1| Neurospora crassa OR74A hypothetical protein (NCU09678.1) partial mRNA Length = 1500 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gccttcgccttcctcaccac 120 |||||||||||||||||||| Sbjct: 979 gccttcgccttcctcaccac 998
>emb|BX890539.20| Zebrafish DNA sequence from clone CH211-241B2, complete sequence Length = 164402 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 90902 gcgtgtgcgtgtgcgtgtgg 90883
>dbj|AK108544.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D09, full insert sequence Length = 818 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 tcttcgccgccggcgccgccttcgcctt 111 ||||||||||||| ||||||||| |||| Sbjct: 109 tcttcgccgccggagccgccttcacctt 82
>dbj|AK107100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A03, full insert sequence Length = 922 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgccgccttcgccttcctca 116 |||||||||||||||||||| Sbjct: 454 cgccgccttcgccttcctca 435
>emb|BX539340.7| Zebrafish DNA sequence from clone DKEY-57K2 in linkage group 2, complete sequence Length = 234470 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 61773 gcgtgtgcgtgtgcgtgtgg 61754
>dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E13, full insert sequence Length = 1328 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 895 gggcttcttggccgccggcgccgccttc 868
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 1830 tcatcaacggcggcggcatc 1849
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 gccgccggcgccgccttcgccttc 112 |||||||| ||||||||||||||| Sbjct: 95298 gccgccggtgccgccttcgccttc 95275
>dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128M09, full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 gggcgtcttcgccgccggcgccgccttc 106 |||| |||| |||||||||||||||||| Sbjct: 895 gggcttcttggccgccggcgccgccttc 868
>gb|AF177217.1|AF177217 Canis familiaris matrix metalloproteinase-2 (MMP-2) mRNA, partial cds Length = 2522 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 2 cgccgcgccgtcgcccatcatcaa 25
>gb|AY889344.1| Synthetic construct Homo sapiens clone FLH029904.01X matrix metalloproteinase 2 (MMP2) mRNA, complete cds Length = 1983 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 84 cgccgcgccgtcgcccatcatcaa 107
>gb|AY891171.1| Synthetic construct Homo sapiens clone FLH009086.01L matrix metalloproteinase 2 (MMP2) mRNA, partial cds Length = 1983 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 84 cgccgcgccgtcgcccatcatcaa 107
>emb|AL772166.15| Mouse DNA sequence from clone RP23-413I12 on chromosome 2, complete sequence Length = 184547 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cagctgaaggtagatcagga 384 |||||||||||||||||||| Sbjct: 167611 cagctgaaggtagatcagga 167630
>emb|AJ234813.1|HVU234813 Hordeum vulgare genomic DNA fragment; clone MWG2162.uni Length = 154 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cgtcttcgccgccggcgccg 101 |||||||||||||||||||| Sbjct: 143 cgtcttcgccgccggcgccg 124
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gccgcatcgccggcgagact 241 |||||||||||||||||||| Sbjct: 1918942 gccgcatcgccggcgagact 1918923
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 ccgccggcgccgccttcgcc 109 |||||||||||||||||||| Sbjct: 79368 ccgccggcgccgccttcgcc 79349
>dbj|AP001152.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-856F16, complete sequence Length = 91200 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tggactccatgatctccatc 441 |||||||||||||||||||| Sbjct: 15582 tggactccatgatctccatc 15563
>gb|AY106488.1| Zea mays PCO084954 mRNA sequence Length = 603 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgccgccggcgccgccttcg 107 |||||||||||||||||||| Sbjct: 368 cgccgccggcgccgccttcg 387
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgcatcgccggcgagac 240 |||||||||||||||||||| Sbjct: 4002866 cgccgcatcgccggcgagac 4002847
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcaacggcggcggcatc 199 |||||||||||||||||||| Sbjct: 1166 tcatcaacggcggcggcatc 1185
>emb|AL359760.10| Human DNA sequence from clone RP11-556K13 on chromosome 1 Contains a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene and the 3' end of the OLFM3 gene for olfactomedin 3, complete sequence Length = 79057 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 74591 gcgtgtgcgtgtgcgtgtgg 74610
>emb|AL606616.3|OSJN00070 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060M15, complete sequence Length = 119918 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 94399 gcgtgtgcgtgtgcgtgtgg 94380
>emb|BX465207.14| Zebrafish DNA sequence from clone DKEY-103I16 in linkage group 18, complete sequence Length = 265632 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 258139 gcgtgtgcgtgtgcgtgtgg 258120
>gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, complete sequence Length = 192938 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 72723 ggcgtgtgcgtgtgcgtgtg 72704
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggcgtgtgcgtgtgcgtgtg 268 |||||||||||||||||||| Sbjct: 479396 ggcgtgtgcgtgtgcgtgtg 479377
>emb|AL158800.6|CNS01RGM Human chromosome 14 DNA sequence BAC R-359N5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163979 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 gccttcgccttcctcaccac 120 |||||||||||||||||||| Sbjct: 106585 gccttcgccttcctcaccac 106604
>ref|NM_205359.1| Gallus gallus insulin-like growth factor binding protein 2, 36kDa (IGFBP2), mRNA gb|U15086.1|GGU15086 Gallus gallus insulin-like growth factor binding protein 2 mRNA, complete cds Length = 2113 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggcccgcgccgcgccgccgc 176 |||||||||||||||||||| Sbjct: 72 ggcccgcgccgcgccgccgc 53
>gb|M58552.1|HUMCLG4Q01 Human collagenase type IV (CLG4) gene, exon 1 Length = 868 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 789 cgccgcgccgtcgcccatcatcaa 812
>gb|M33789.1|HUMCLG4 Human type-4 collagenase (CLG4) preproenzyme gene, exon 1 Length = 451 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 374 cgccgcgccgtcgcccatcatcaa 397
>gb|L11879.1|WHTWALI1A Triticum aestivum metallothionein-like protein (wali1) mRNA, complete cds Length = 558 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcgtgtgcgtgtgcgtgtgg 269 |||||||||||||||||||| Sbjct: 373 gcgtgtgcgtgtgcgtgtgg 392
>gb|J03210.1|HUMCN4GEL Human collagenase type IV mRNA, 3' end Length = 2733 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 cgccgcgccgccgcccatcatcaa 186 |||||||||| ||||||||||||| Sbjct: 37 cgccgcgccgtcgcccatcatcaa 60
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 ttcgccgccggcgccgcctt 105 |||||||||||||||||||| Sbjct: 2880734 ttcgccgccggcgccgcctt 2880715 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 65,056,468 Number of extensions: 4244093 Number of successful extensions: 143986 Number of sequences better than 10.0: 206 Number of HSP's gapped: 143986 Number of HSP's successfully gapped: 237 Length of query: 568 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 546 Effective length of database: 18,508,616,841 Effective search space: 10105704795186 Effective search space used: 10105704795186 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
