ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf79f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK067589:Os01g0802100 492 e-139
2AK072092:Os02g0271000 30 3.8
3Os11g0522900:Os11g0522900 29 6.5
4Os07g0590800:Os07g0590800 29 6.5
5AK059293: 29 6.5
6AK070195:Os04g0396800 29 6.5
7Os12g0209300:Os12g0209300 29 8.5 
>AK067589:Os01g0802100 |
          Length = 401
 Score =  492 bits (1266), Expect = e-139
 Identities = 248/315 (78%), Positives = 262/315 (83%)
 Frame = +3

Query: 204  LNLFSPCKINVFLRITGKRPDGFHDLASLFHVVSLGDTIKFSLSPSKSKDRLSTNVAGVP 383
            LNLFSPCKINVFLRITGKRPDGFHDLASLFHV+SLGDTIKFSLSPSKSKDRLSTNVAGVP
Sbjct: 88   LNLFSPCKINVFLRITGKRPDGFHDLASLFHVISLGDTIKFSLSPSKSKDRLSTNVAGVP 147

Query: 384  VDESNLIIRALDLYRKKTGTDKHFWIHLDKKVPXXXXXXXXXXXXXXXXWAANQFSGSIA 563
            VDESNLII+AL+LYRKKTGTD  FWIHLDKKVP                WAANQFSG IA
Sbjct: 148  VDESNLIIKALNLYRKKTGTDNFFWIHLDKKVPTGAGLGGGSSNAATALWAANQFSGCIA 207

Query: 564  SEKDLQEWSGEIGSDIPFFFSRGAAYCTGRGEIVQDIPNLLPENLPMVLIKPPEACSTAE 743
            SEK+LQEWSGEIGSDIPFFFS+GAAYCTGRGEIV+DI N LP NLPMVL+KPPEACSTAE
Sbjct: 208  SEKELQEWSGEIGSDIPFFFSQGAAYCTGRGEIVEDIRNPLPANLPMVLVKPPEACSTAE 267

Query: 744  VYKRLRLDQTSQADPLALLKEITQNGISQDVCVNDLEPPAFEVLQSLKKLKKRFIASNRG 923
            VYKRLRL+ TSQ DPL LLKEIT+NGISQD CVNDLEPPAFEVL SLK+LKKR IA+NRG
Sbjct: 268  VYKRLRLEHTSQTDPLVLLKEITENGISQDACVNDLEPPAFEVLPSLKRLKKRIIAANRG 327

Query: 924  DYSAVFMXXXXXXXXXXXXPDPPAFVYDDEDYKDVFVSEARFLTREENEWYREPMSSSAT 1103
            DY AVFM            PDPPAFVYDD+DYKD FVSEA FLTR ENEWYREP+SS  T
Sbjct: 328  DYDAVFMSGSGSTIVGIGSPDPPAFVYDDDDYKDTFVSEACFLTRNENEWYREPISSKIT 387

Query: 1104 FSKEDSLSEAAPVVD 1148
             S+ED   E A V D
Sbjct: 388  -SEEDLPPEVASVSD 401
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>AK072092:Os02g0271000 |
          Length = 738

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -2

Query: 475 FLSRCIQKCLSVP-VFLRYRSSALMIKLLSSTGTPATLVDSRSLLLLGDSENLIVSPKLT 299
           FL+ C +   SVP V + Y  +  +   ++ST TP   V S ++ ++G     ++SP++ 
Sbjct: 429 FLNACSRA--SVPCVLVDYEITRRIESYMTSTSTPMVKVSS-AMTVVGSG---VLSPRIA 482

Query: 298 T*NREARSWNPSGLFPVILKKTLILQG 218
             +    S  PS LFP ILK  +   G
Sbjct: 483 AFS----SRGPSSLFPGILKPDIAAPG 505
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>Os11g0522900:Os11g0522900 |
          Length = 211

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 97  ASRPLWLWLWRGEGLSS-GLPASGQRGPPRP 8
           A++PL LWL  G G SS G+ A  + GP RP
Sbjct: 81  ATKPLVLWLNGGPGCSSLGVGAFSENGPFRP 111
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>Os07g0590800:Os07g0590800 |
          Length = 235

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -2

Query: 172 GRGRRPDSEPRNAEEERAKEEDN-----AVASRPLWLWLWRGEG 56
           GRGRR ++E R AE   A+         +V  R  W W W G G
Sbjct: 187 GRGRRDEAEQREAECGCARHCGGGGLLGSVRRRWWWWWWWGGSG 230
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>AK059293: |
          Length = 472

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 97  ASRPLWLWLWRGEGLSS-GLPASGQRGPPRP 8
           A++PL LWL  G G SS G+ A  + GP RP
Sbjct: 81  ATKPLVLWLNGGPGCSSLGVGAFSENGPFRP 111
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>AK070195:Os04g0396800 |
          Length = 470

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 97  ASRPLWLWLWRGEGLSS-GLPASGQRGPPRP 8
           A++PL LWL  G G SS G+ A  + GP RP
Sbjct: 77  ATKPLVLWLNGGPGCSSVGVGAFSENGPFRP 107
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>Os12g0209300:Os12g0209300 |
          Length = 1174

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +3

Query: 660 IVQDIPNLLPENLPMVLIKPPEACSTAEVYKRLRLDQTSQADPLALLKEITQNGISQDV 836
           +V D+  ++ E   + L++   +  TAE  KR R    S  DP+AL+ ++   G+  D+
Sbjct: 631 LVNDLVGVVSEEKLLDLLEIAMSSDTAETVKRSRELMDSGIDPMALMSQLA--GLIMDI 687


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 36,746,209
Number of extensions: 818041
Number of successful extensions: 2376
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2373
Number of HSP's successfully gapped: 7
Length of query: 440
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 336
Effective length of database: 11,235,591
Effective search space: 3775158576
Effective search space used: 3775158576
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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