ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf79f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001051079.1| Oryza sativa (japonica cultivar-group) Os01g0802100 (Os01g0802100) mRNA, complete cds Length = 1611 Score = 874 bits (441), Expect = 0.0 Identities = 777/889 (87%) Strand = Plus / Plus Query: 207 aacctgttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagat 266 ||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 351 aacctattctcaccttgcaaaattaatgtgttcttgaggataacgggtaagagaccagat 410 Query: 267 gggttccatgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattc 326 ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 411 gggttccatgacctggcttctctgtttcatgtgataagtttgggtgatactatcaaattc 470 Query: 327 tcactgtcgccaagtaagagcaaagatcggctatcaaccaatgttgcaggtgtcccagtt 386 ||| |||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| Sbjct: 471 tcattgtcaccaagtaagagcaaagatcgcttgtcaaccaatgtagcaggtgtcccagtt 530 Query: 387 gatgagagtaacttgatcatcagggcacttgatctgtaccgcaagaaaactggcaccgat 446 ||||| || || |||||||||| |||||| |||| ||||||||||||||||| || || Sbjct: 531 gatgaaagcaatttgatcatcaaggcactcaatctttaccgcaagaaaactggaactgac 590 Query: 447 aagcacttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggagga 506 || |||||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 591 aactttttttggattcatcttgataagaaggtccctactggtgctggtcttggtggtgga 650 Query: 507 agcagtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttca 566 |||||||||||||||||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 651 agcagtaatgctgcaactgcgctgtgggccgccaaccagtttagtggctgcattgcttca 710 Query: 567 gaaaaagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttca 626 ||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 711 gaaaaggagcttcaggagtggtctggagagataggatcggatattcccttcttcttttca 770 Query: 627 cgaggagcagcatattgtaccggtagaggagagattgtccaagatattccaaacctgttg 686 | ||||||||| |||||||||||||||||||||||||| ||||||||| || | ||| Sbjct: 771 caaggagcagcgtattgtaccggtagaggagagattgttgaagatattcggaatccattg 830 Query: 687 ccagagaatctgccaatggttctaataaagccacctgaagcatgctcaaccgctgaagtt 746 |||| ||| |||| ||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 831 ccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaagtt 890 Query: 747 tacaagcgactccggttagatcagactagtcaagctgatcctttggctttgctcaaggaa 806 |||||||| ||| ||||||| || || |||||| ||||||| |||| |||||||||||| Sbjct: 891 tacaagcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaa 950 Query: 807 attacgcaaaatgggatatcacaagatgtctgtgtaaatgatctagagcctccagctttt 866 ||||| |||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct: 951 attactgaaaatgggatatcacaggatgcctgtgttaatgatctagaacctccagcattt 1010 Query: 867 gaggtgttgcagtcactaaagaagttgaagaaacgatttattgcatccaataggggagat 926 |||||||||| |||||||||| |||||||||||| | ||||| | || |||||||| Sbjct: 1011 gaggtgttgccatcactaaagaggttgaagaaacgtataattgctgctaaccggggagat 1070 Query: 927 tacagtgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagac 986 || |||||||||||||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 1071 tatgatgctgtttttatgtcaggaagtggaagcacaattgttgggattggttcaccagat 1130 Query: 987 ccacctgcgtttgtgtatgacgatgaagactacaaggacgtttttgtgtcagaggctcgc 1046 || ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||| || Sbjct: 1131 ccgcctgcatttgtgtatgatgatgatgactacaaggatacttttgtgtcagaggcctgc 1190 Query: 1047 tttctcactcgcgaggagaatgaatggtacagggaaccaatgtcatcga 1095 || |||||||| | ||||| || |||||||| |||||||| ||||||| Sbjct: 1191 ttcctcactcgtaatgagaacgagtggtacagagaaccaatctcatcga 1239
>dbj|AK067589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G19, full insert sequence Length = 1612 Score = 874 bits (441), Expect = 0.0 Identities = 777/889 (87%) Strand = Plus / Plus Query: 207 aacctgttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagat 266 ||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 352 aacctattctcaccttgcaaaattaatgtgttcttgaggataacgggtaagagaccagat 411 Query: 267 gggttccatgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattc 326 ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||| Sbjct: 412 gggttccatgacctggcttctctgtttcatgtgataagtttgggtgatactatcaaattc 471 Query: 327 tcactgtcgccaagtaagagcaaagatcggctatcaaccaatgttgcaggtgtcccagtt 386 ||| |||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| Sbjct: 472 tcattgtcaccaagtaagagcaaagatcgcttgtcaaccaatgtagcaggtgtcccagtt 531 Query: 387 gatgagagtaacttgatcatcagggcacttgatctgtaccgcaagaaaactggcaccgat 446 ||||| || || |||||||||| |||||| |||| ||||||||||||||||| || || Sbjct: 532 gatgaaagcaatttgatcatcaaggcactcaatctttaccgcaagaaaactggaactgac 591 Query: 447 aagcacttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggagga 506 || |||||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 592 aactttttttggattcatcttgataagaaggtccctactggtgctggtcttggtggtgga 651 Query: 507 agcagtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttca 566 |||||||||||||||||||| || ||||| || |||||||||||||| ||||||||||| Sbjct: 652 agcagtaatgctgcaactgcgctgtgggccgccaaccagtttagtggctgcattgcttca 711 Query: 567 gaaaaagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttca 626 ||||| || ||||| || |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 712 gaaaaggagcttcaggagtggtctggagagataggatcggatattcccttcttcttttca 771 Query: 627 cgaggagcagcatattgtaccggtagaggagagattgtccaagatattccaaacctgttg 686 | ||||||||| |||||||||||||||||||||||||| ||||||||| || | ||| Sbjct: 772 caaggagcagcgtattgtaccggtagaggagagattgttgaagatattcggaatccattg 831 Query: 687 ccagagaatctgccaatggttctaataaagccacctgaagcatgctcaaccgctgaagtt 746 |||| ||| |||| ||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 832 ccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaagtt 891 Query: 747 tacaagcgactccggttagatcagactagtcaagctgatcctttggctttgctcaaggaa 806 |||||||| ||| ||||||| || || |||||| ||||||| |||| |||||||||||| Sbjct: 892 tacaagcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaa 951 Query: 807 attacgcaaaatgggatatcacaagatgtctgtgtaaatgatctagagcctccagctttt 866 ||||| |||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct: 952 attactgaaaatgggatatcacaggatgcctgtgttaatgatctagaacctccagcattt 1011 Query: 867 gaggtgttgcagtcactaaagaagttgaagaaacgatttattgcatccaataggggagat 926 |||||||||| |||||||||| |||||||||||| | ||||| | || |||||||| Sbjct: 1012 gaggtgttgccatcactaaagaggttgaagaaacgtataattgctgctaaccggggagat 1071 Query: 927 tacagtgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagac 986 || |||||||||||||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 1072 tatgatgctgtttttatgtcaggaagtggaagcacaattgttgggattggttcaccagat 1131 Query: 987 ccacctgcgtttgtgtatgacgatgaagactacaaggacgtttttgtgtcagaggctcgc 1046 || ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||| || Sbjct: 1132 ccgcctgcatttgtgtatgatgatgatgactacaaggatacttttgtgtcagaggcctgc 1191 Query: 1047 tttctcactcgcgaggagaatgaatggtacagggaaccaatgtcatcga 1095 || |||||||| | ||||| || |||||||| |||||||| ||||||| Sbjct: 1192 ttcctcactcgtaatgagaacgagtggtacagagaaccaatctcatcga 1240
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 250 bits (126), Expect = 1e-62 Identities = 180/198 (90%) Strand = Plus / Plus Query: 462 catcttgataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgca 521 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 33967068 catcttgataagaaggtccctactggtgctggtcttggtggtggaagcagtaatgctgca 33967127 Query: 522 actgcactatgggctgctaaccagtttagtggtagcattgcttcagaaaaagatcttcaa 581 ||||| || ||||| || |||||||||||||| |||||||||||||||| || ||||| Sbjct: 33967128 actgcgctgtgggccgccaaccagtttagtggctgcattgcttcagaaaaggagcttcag 33967187 Query: 582 gaatggtctggtgagattggatcagatatccccttcttcttttcacgaggagcagcatat 641 || |||||||| ||||| ||||| ||||| |||||||||||||||| ||||||||| ||| Sbjct: 33967188 gagtggtctggagagataggatcggatattcccttcttcttttcacaaggagcagcgtat 33967247 Query: 642 tgtaccggtagaggagag 659 |||||||||||||||||| Sbjct: 33967248 tgtaccggtagaggagag 33967265 Score = 129 bits (65), Expect = 3e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 303 agtttgggtgatactatcaaattctcactgtcgccaagtaagagcaaagatcggctatca 362 ||||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||| Sbjct: 33966650 agtttgggtgatactatcaaattctcattgtcaccaagtaagagcaaagatcgcttgtca 33966709 Query: 363 accaatgttgcaggtgtcccagttgatga 391 |||||||| |||||||||||||||||||| Sbjct: 33966710 accaatgtagcaggtgtcccagttgatga 33966738 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 228 attaatgtcttcttgaggataaccgggaagagaccagatgggttccatgacctggcttct 287 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 33965855 attaatgtgttcttgaggataacgggtaagagaccagatgggttccatgacctggcttct 33965914 Query: 288 ctgtttca 295 |||||||| Sbjct: 33965915 ctgtttca 33965922 Score = 91.7 bits (46), Expect = 6e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 751 agcgactccggttagatcagactagtcaagctgatcctttggctttgctcaaggaaatta 810 |||| ||| ||||||| || || |||||| ||||||| |||| |||||||||||||||| Sbjct: 33968068 agcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaaatta 33968127 Query: 811 cgcaaaatgggatatcacaagatgtctgtgtaaatgatctag 852 | |||||||||||||||| |||| |||||| |||||||||| Sbjct: 33968128 ctgaaaatgggatatcacaggatgcctgtgttaatgatctag 33968169 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 684 ttgccagagaatctgccaatggttctaataaagccacctgaagcatgctcaaccgctgaa 743 ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||| Sbjct: 33967939 ttgccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaa 33967998 Query: 744 gtttacaag 752 ||||||||| Sbjct: 33967999 gtttacaag 33968007 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 951 agtggaagcacgattgtcggaattggttccccagacccacctgcgtttgtgtatgacgat 1010 ||||||||||| ||||| || |||||||| ||||| || ||||| ||||||||||| ||| Sbjct: 33968867 agtggaagcacaattgttgggattggttcaccagatccgcctgcatttgtgtatgatgat 33968926 Query: 1011 gaagactacaaggacgtttttgtgtcag 1038 || ||||||||||| ||||||||||| Sbjct: 33968927 gatgactacaaggatacttttgtgtcag 33968954 Score = 75.8 bits (38), Expect = 4e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 855 cctccagcttttgaggtgttgcagtcactaaagaagttgaagaaacgatttattgcatcc 914 |||||||| ||||||||||||| |||||||||| |||||||||||| | ||||| | Sbjct: 33968324 cctccagcatttgaggtgttgccatcactaaagaggttgaagaaacgtataattgctgct 33968383 Query: 915 aataggggagattacagtgctgtttttatgtcaggaag 952 || |||||||||| ||||||||||||||||||||| Sbjct: 33968384 aaccggggagattatgatgctgtttttatgtcaggaag 33968421 Score = 46.1 bits (23), Expect = 0.32 Identities = 35/39 (89%) Strand = Plus / Plus Query: 401 gatcatcagggcacttgatctgtaccgcaagaaaactgg 439 |||||||| |||||| |||| ||||||||||||||||| Sbjct: 33966851 gatcatcaaggcactcaatctttaccgcaagaaaactgg 33966889
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 250 bits (126), Expect = 1e-62 Identities = 180/198 (90%) Strand = Plus / Plus Query: 462 catcttgataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgca 521 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 98511 catcttgataagaaggtccctactggtgctggtcttggtggtggaagcagtaatgctgca 98570 Query: 522 actgcactatgggctgctaaccagtttagtggtagcattgcttcagaaaaagatcttcaa 581 ||||| || ||||| || |||||||||||||| |||||||||||||||| || ||||| Sbjct: 98571 actgcgctgtgggccgccaaccagtttagtggctgcattgcttcagaaaaggagcttcag 98630 Query: 582 gaatggtctggtgagattggatcagatatccccttcttcttttcacgaggagcagcatat 641 || |||||||| ||||| ||||| ||||| |||||||||||||||| ||||||||| ||| Sbjct: 98631 gagtggtctggagagataggatcggatattcccttcttcttttcacaaggagcagcgtat 98690 Query: 642 tgtaccggtagaggagag 659 |||||||||||||||||| Sbjct: 98691 tgtaccggtagaggagag 98708 Score = 129 bits (65), Expect = 3e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 303 agtttgggtgatactatcaaattctcactgtcgccaagtaagagcaaagatcggctatca 362 ||||||||||||||||||||||||||| |||| |||||||||||||||||||| | ||| Sbjct: 98093 agtttgggtgatactatcaaattctcattgtcaccaagtaagagcaaagatcgcttgtca 98152 Query: 363 accaatgttgcaggtgtcccagttgatga 391 |||||||| |||||||||||||||||||| Sbjct: 98153 accaatgtagcaggtgtcccagttgatga 98181 Score = 111 bits (56), Expect = 7e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 228 attaatgtcttcttgaggataaccgggaagagaccagatgggttccatgacctggcttct 287 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 97298 attaatgtgttcttgaggataacgggtaagagaccagatgggttccatgacctggcttct 97357 Query: 288 ctgtttca 295 |||||||| Sbjct: 97358 ctgtttca 97365 Score = 91.7 bits (46), Expect = 6e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 751 agcgactccggttagatcagactagtcaagctgatcctttggctttgctcaaggaaatta 810 |||| ||| ||||||| || || |||||| ||||||| |||| |||||||||||||||| Sbjct: 99511 agcggctcaggttagagcacacaagtcaaactgatcccttggtattgctcaaggaaatta 99570 Query: 811 cgcaaaatgggatatcacaagatgtctgtgtaaatgatctag 852 | |||||||||||||||| |||| |||||| |||||||||| Sbjct: 99571 ctgaaaatgggatatcacaggatgcctgtgttaatgatctag 99612 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 684 ttgccagagaatctgccaatggttctaataaagccacctgaagcatgctcaaccgctgaa 743 ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||| Sbjct: 99382 ttgccagcaaatttgccgatggtactagtaaagccacctgaagcatgctcaacagctgaa 99441 Query: 744 gtttacaag 752 ||||||||| Sbjct: 99442 gtttacaag 99450 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 951 agtggaagcacgattgtcggaattggttccccagacccacctgcgtttgtgtatgacgat 1010 ||||||||||| ||||| || |||||||| ||||| || ||||| ||||||||||| ||| Sbjct: 100310 agtggaagcacaattgttgggattggttcaccagatccgcctgcatttgtgtatgatgat 100369 Query: 1011 gaagactacaaggacgtttttgtgtcag 1038 || ||||||||||| ||||||||||| Sbjct: 100370 gatgactacaaggatacttttgtgtcag 100397 Score = 75.8 bits (38), Expect = 4e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 855 cctccagcttttgaggtgttgcagtcactaaagaagttgaagaaacgatttattgcatcc 914 |||||||| ||||||||||||| |||||||||| |||||||||||| | ||||| | Sbjct: 99767 cctccagcatttgaggtgttgccatcactaaagaggttgaagaaacgtataattgctgct 99826 Query: 915 aataggggagattacagtgctgtttttatgtcaggaag 952 || |||||||||| ||||||||||||||||||||| Sbjct: 99827 aaccggggagattatgatgctgtttttatgtcaggaag 99864 Score = 46.1 bits (23), Expect = 0.32 Identities = 35/39 (89%) Strand = Plus / Plus Query: 401 gatcatcagggcacttgatctgtaccgcaagaaaactgg 439 |||||||| |||||| |||| ||||||||||||||||| Sbjct: 98294 gatcatcaaggcactcaatctttaccgcaagaaaactgg 98332
>gb|AY111335.1| Zea mays CL12369_1 mRNA sequence Length = 614 Score = 186 bits (94), Expect = 1e-43 Identities = 194/229 (84%) Strand = Plus / Minus Query: 796 tgctcaaggaaattacgcaaaatgggatatcacaagatgtctgtgtaaatgatctagagc 855 ||||| ||||||| || || |||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 596 tgctcgaggaaataactcagaatgggatatcacaagatgtttgtgttaatgacctagagc 537 Query: 856 ctccagcttttgaggtgttgcagtcactaaagaagttgaagaaacgatttattgcatcca 915 ||||||||||||||||||||| ||||| |||| ||||||||||||| |||||||| | Sbjct: 536 ctccagcttttgaggtgttgccctcacttaagaggttgaagaaacgaattattgcagctg 477 Query: 916 ataggggagattacagtgctgtttttatgtcaggaagtggaagcacgattgtcggaattg 975 ||| ||||| ||||||| |||||||||||||||||||| ||||| || |||| Sbjct: 476 gccgggatgattatagtgctgnnnnnatgtcaggaagtggaagcacaattgttggtattg 417 Query: 976 gttccccagacccacctgcgtttgtgtatgacgatgaagactacaagga 1024 |||| || || || ||||| || |||||||||||||||||||||||||| Sbjct: 416 gttcaccggatcctcctgcattcgtgtatgacgatgaagactacaagga 368
>emb|AJ249324.1|MXP249324 Mentha x piperita mRNA for isopentenyl monophosphate kinase (ipk gene) Length = 1481 Score = 149 bits (75), Expect = 3e-32 Identities = 192/231 (83%) Strand = Plus / Plus Query: 447 aagcacttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggagga 506 |||||||||||||| ||||||||||||||||| || ||||| ||||| ||||| || || Sbjct: 537 aagcacttttggattcatcttgataagaaggttccgactggagctgggcttgggggtggc 596 Query: 507 agcagtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttca 566 || || |||||||| ||||| ||||||| || || ||||| ||||| ||||||| | Sbjct: 597 agtagcaatgctgctactgctttatgggcagcaaatcagttcagtggctgcattgcaact 656 Query: 567 gaaaaagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttca 626 ||||| |||||||||||||||||||| || ||||| || |||||||| ||||| || || Sbjct: 657 gaaaaggatcttcaagaatggtctggagaaattggctctgatatcccgttctttttctct 716 Query: 627 cgaggagcagcatattgtaccggtagaggagagattgtccaagatattcca 677 | ||||| ||||||||||| |||||||||||| |||| |||| |||||| Sbjct: 717 catggagctgcatattgtacgggtagaggagaggttgtagaagacattcca 767 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 740 tgaagtttacaagcgactccggttaga 766 ||||||||||||||| ||||||||||| Sbjct: 830 tgaagtttacaagcgtctccggttaga 856
>gb|AF179283.1|AF179283 Mentha x piperita isopentenyl monophosphate kinase (IPK) mRNA, complete cds Length = 1481 Score = 149 bits (75), Expect = 3e-32 Identities = 192/231 (83%) Strand = Plus / Plus Query: 447 aagcacttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggagga 506 |||||||||||||| ||||||||||||||||| || ||||| ||||| ||||| || || Sbjct: 537 aagcacttttggattcatcttgataagaaggttccgactggagctgggcttgggggtggc 596 Query: 507 agcagtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttca 566 || || |||||||| ||||| ||||||| || || ||||| ||||| ||||||| | Sbjct: 597 agtagcaatgctgctactgctttatgggcagcaaatcagttcagtggctgcattgcaact 656 Query: 567 gaaaaagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttca 626 ||||| |||||||||||||||||||| || ||||| || |||||||| ||||| || || Sbjct: 657 gaaaaggatcttcaagaatggtctggagaaattggctctgatatcccgttctttttctct 716 Query: 627 cgaggagcagcatattgtaccggtagaggagagattgtccaagatattcca 677 | ||||| ||||||||||| |||||||||||| |||| |||| |||||| Sbjct: 717 catggagctgcatattgtacgggtagaggagaggttgtagaagacattcca 767 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 740 tgaagtttacaagcgactccggttaga 766 ||||||||||||||| ||||||||||| Sbjct: 830 tgaagtttacaagcgtctccggttaga 856
>gb|U62773.1|SLU62773 Lycopersicon esculentum ripening-associated protein (pTOM41) gene, partial cds; nuclear gene for chromoplast product Length = 1423 Score = 109 bits (55), Expect = 3e-20 Identities = 181/223 (81%) Strand = Plus / Plus Query: 451 acttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggaggaagca 510 |||||||||| |||||||||||||| || || ||||| |||||||||||||| || |||| Sbjct: 589 acttttggattcatcttgataagaaagtgcctactggagctggtcttggtggtgggagca 648 Query: 511 gtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttcagaaa 570 ||||||||||||| | || ||||| || || || || |||||| | |||| | |||| Sbjct: 649 gtaatgctgcaacaactctgtgggcagcaaatcaattcagtggttgtgttgccactgaaa 708 Query: 571 aagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttcacgag 630 | || || ||||| ||||||||||||||||| || ||||| || |||||||| || | | Sbjct: 709 aggagctccaagagtggtctggtgagattggttctgatattcctttcttcttctctcatg 768 Query: 631 gagcagcatattgtaccggtagaggagagattgtccaagatat 673 ||||||| || ||||| ||||| || ||| |||| || ||||| Sbjct: 769 gagcagcctactgtacgggtaggggtgaggttgttcaggatat 811 Score = 42.1 bits (21), Expect = 5.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 726 gcatgctcaaccgctgaagtttacaagcg 754 |||||||| || ||||||||||||||||| Sbjct: 864 gcatgctccactgctgaagtttacaagcg 892
>gb|AF263101.1|AF263101 Lycopersicon esculentum 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (ispE) mRNA, partial cds; chloroplast gene for chloroplast product Length = 1206 Score = 109 bits (55), Expect = 3e-20 Identities = 181/223 (81%) Strand = Plus / Plus Query: 451 acttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggaggaagca 510 |||||||||| |||||||||||||| || || ||||| |||||||||||||| || |||| Sbjct: 512 acttttggattcatcttgataagaaagtgcctactggagctggtcttggtggtgggagca 571 Query: 511 gtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttcagaaa 570 ||||||||||||| | || ||||| || || || || |||||| | |||| | |||| Sbjct: 572 gtaatgctgcaacaactctgtgggcagcaaatcaattcagtggttgtgttgccactgaaa 631 Query: 571 aagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttcacgag 630 | || || ||||| ||||||||||||||||| || ||||| || |||||||| || | | Sbjct: 632 aggagctccaagagtggtctggtgagattggttctgatattcctttcttcttctctcatg 691 Query: 631 gagcagcatattgtaccggtagaggagagattgtccaagatat 673 ||||||| || ||||| ||||| || ||| |||| || ||||| Sbjct: 692 gagcagcctactgtacgggtaggggtgaggttgttcaggatat 734 Score = 42.1 bits (21), Expect = 5.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 726 gcatgctcaaccgctgaagtttacaagcg 754 |||||||| || ||||||||||||||||| Sbjct: 787 gcatgctccactgctgaagtttacaagcg 815
>gb|AF258339.1|AF258339 Expression vector pNCO-HIS6-TM-YCHB 4-diphosphocytidyl-2C-methyl-D-erythritol kinase mRNA, complete cds Length = 4441 Score = 109 bits (55), Expect = 3e-20 Identities = 181/223 (81%) Strand = Plus / Plus Query: 451 acttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggaggaagca 510 |||||||||| |||||||||||||| || || ||||| |||||||||||||| || |||| Sbjct: 416 acttttggattcatcttgataagaaagtgcctactggagctggtcttggtggtgggagca 475 Query: 511 gtaatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttcagaaa 570 ||||||||||||| | || ||||| || || || || |||||| | |||| | |||| Sbjct: 476 gtaatgctgcaacaactctgtgggcagcaaatcaattcagtggttgtgttgccactgaaa 535 Query: 571 aagatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttcacgag 630 | || || ||||| ||||||||||||||||| || ||||| || |||||||| || | | Sbjct: 536 aggagctccaagagtggtctggtgagattggttctgatattcctttcttcttctctcatg 595 Query: 631 gagcagcatattgtaccggtagaggagagattgtccaagatat 673 ||||||| || ||||| ||||| || ||| |||| || ||||| Sbjct: 596 gagcagcctactgtacgggtaggggtgaggttgttcaggatat 638 Score = 42.1 bits (21), Expect = 5.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 726 gcatgctcaaccgctgaagtttacaagcg 754 |||||||| || ||||||||||||||||| Sbjct: 691 gcatgctccactgctgaagtttacaagcg 719
>gb|DQ269453.2| Stevia rebaudiana 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase mRNA, complete cds Length = 1161 Score = 91.7 bits (46), Expect = 6e-15 Identities = 178/222 (80%) Strand = Plus / Plus Query: 452 cttttggatacatcttgataagaaggtcccaactggtgctggtcttggtggaggaagcag 511 ||||||||| ||| ||||||| | ||| ||||| || || || |||||||| ||||| || Sbjct: 528 cttttggattcatgttgataaaagggttccaaccggggcggggcttggtggtggaagtag 587 Query: 512 taatgctgcaactgcactatgggctgctaaccagtttagtggtagcattgcttcagaaaa 571 |||||||||||| || | ||||| |||||||| ||||||||| | | || | ||||| Sbjct: 588 taatgctgcaaccgctttgtgggcggctaaccaatttagtggtggtttggcgaccgaaaa 647 Query: 572 agatcttcaagaatggtctggtgagattggatcagatatccccttcttcttttcacgagg 631 ||| || |||||||||||||| |||||||| |||||| | || ||||| || ||| || Sbjct: 648 agaactccaagaatggtctggcgagattggttcagatgttcctttctttttctcaaatgg 707 Query: 632 agcagcatattgtaccggtagaggagagattgtccaagatat 673 ||| || ||||| || || |||| |||||||| |||||||| Sbjct: 708 agccgcctattgcacaggccgaggtgagattgttcaagatat 749 Score = 48.1 bits (24), Expect = 0.081 Identities = 33/36 (91%) Strand = Plus / Plus Query: 732 tcaaccgctgaagtttacaagcgactccggttagat 767 ||||||||||||||||||||||| | ||||||||| Sbjct: 754 tcaaccgctgaagtttacaagcggtttcggttagat 789 Score = 48.1 bits (24), Expect = 0.081 Identities = 27/28 (96%) Strand = Plus / Plus Query: 934 ctgtttttatgtcaggaagtggaagcac 961 ||||||||||||| |||||||||||||| Sbjct: 956 ctgtttttatgtctggaagtggaagcac 983 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 822 atatcacaagatgtctgtgtaaatgat 848 |||||||||||||| |||||||||||| Sbjct: 844 atatcacaagatgtttgtgtaaatgat 870 Score = 42.1 bits (21), Expect = 5.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 255 aagagaccagatgggttccatgacctggcttctctgtttca 295 ||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 331 aagagaccagatgggtttcatgatttggcatctctatttca 371
>ref|NM_128250.2| Arabidopsis thaliana ATCDPMEK; ATP binding / kinase (ATCDPMEK) mRNA, complete cds Length = 1777 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 243 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 302 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 303 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 362 Query: 333 tc 334 || Sbjct: 363 tc 364 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 498 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 557 Query: 528 ctatgggc 535 || ||||| Sbjct: 558 ctctgggc 565 Score = 61.9 bits (31), Expect = 5e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || ||||||||||| | Sbjct: 622 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtaccggga 681 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 682 gaggtgagattgtccaaga 700 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 962 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1021 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 | ||| | ||||| |||||||| |||||| |||| Sbjct: 1022 tcaatttatatatgatgatgaagaatacaagaacgt 1057 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 702 atggttctaataaagccacctgaagcatgctcaaccgctgaagtttacaagcgactccgg 761 ||||| || |||||||| | |||||||| || || |||||||||||||| || || || Sbjct: 732 atggtgctcataaagccccgagaagcatgttccactgctgaagtttacaaacgtcttcgt 791 Query: 762 ttagatcagac 772 ||||||||||| Sbjct: 792 ttagatcagac 802
>gb|BT000208.1| Arabidopsis thaliana putative ripening-associated protein (At2g26930) mRNA, complete cds Length = 1222 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 226 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 285 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 286 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 345 Query: 333 tc 334 || Sbjct: 346 tc 347 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 481 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 540 Query: 528 ctatgggc 535 || ||||| Sbjct: 541 ctctgggc 548 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 945 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1004 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 | ||| | ||||| |||||||| |||||| |||| Sbjct: 1005 tcaatttatatatgatgatgaagaatacaagaacgt 1040 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || |||||||| || | Sbjct: 605 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtactggga 664 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 665 gaggtgagattgtccaaga 683 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 702 atggttctaataaagccacctgaagcatgctcaaccgctgaagtttacaagcgactccgg 761 ||||| || |||||||| | |||||||| || || |||||||||||||| || || || Sbjct: 715 atggtgctcataaagccccgagaagcatgttccactgctgaagtttacaaacgtcttcgt 774 Query: 762 ttagatcagac 772 ||||||||||| Sbjct: 775 ttagatcagac 785
>gb|AY136394.1| Arabidopsis thaliana putative ripening-associated protein (At2g26930) mRNA, complete cds Length = 1285 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 243 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 302 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 303 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 362 Query: 333 tc 334 || Sbjct: 363 tc 364 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 498 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 557 Query: 528 ctatgggc 535 || ||||| Sbjct: 558 ctctgggc 565 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 962 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1021 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 | ||| | ||||| |||||||| |||||| |||| Sbjct: 1022 tcaatttatatatgatgatgaagaatacaagaacgt 1057 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || |||||||| || | Sbjct: 622 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtactggga 681 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 682 gaggtgagattgtccaaga 700 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 702 atggttctaataaagccacctgaagcatgctcaaccgctgaagtttacaagcgactccgg 761 ||||| || |||||||| | |||||||| || || |||||||||||||| || || || Sbjct: 732 atggtgctcataaagccccgagaagcatgttccactgctgaagtttacaaacgtcttcgt 791 Query: 762 ttagatcagac 772 ||||||||||| Sbjct: 792 ttagatcagac 802
>dbj|AB037877.1| Arabidopsis thaliana ATCDPMEK mRNA for 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase, complete cds Length = 1288 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 231 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 290 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 291 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 350 Query: 333 tc 334 || Sbjct: 351 tc 352 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 486 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 545 Query: 528 ctatgggc 535 || ||||| Sbjct: 546 ctctgggc 553 Score = 61.9 bits (31), Expect = 5e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || ||||||||||| | Sbjct: 610 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtaccggga 669 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 670 gaggtgagattgtccaaga 688 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 950 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1009 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 | ||| | ||||| |||||||| |||||| |||| Sbjct: 1010 tcaatttatatatgatgatgaagaatacaagaacgt 1045 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 702 atggttctaataaagccacctgaagcatgctcaaccgctgaagtttacaagcgactccgg 761 ||||| || |||||||| | |||||||| || || |||||||||||||| || || || Sbjct: 720 atggtgctcataaagccccgagaagcatgttccactgctgaagtttacaaacgtcttcgt 779 Query: 762 ttagatcagac 772 ||||||||||| Sbjct: 780 ttagatcagac 790
>emb|BX818922.1|CNS0AAEF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1252 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 234 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 293 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 294 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 353 Query: 333 tc 334 || Sbjct: 354 tc 355 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 489 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 548 Query: 528 ctatgggc 535 || ||||| Sbjct: 549 ctctgggc 556
>emb|BX821564.1|CNS0A98L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1237 Score = 67.9 bits (34), Expect = 9e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 231 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 290 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || || ||||| ||||||||| || Sbjct: 291 catgatttagcctctttgtttcatgtgattagcttaggagacactattaaattctcattg 350 Query: 333 tc 334 || Sbjct: 351 tc 352 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 486 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 545 Query: 528 ctatgggc 535 || ||||| Sbjct: 546 ctctgggc 553 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 950 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1009 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 || ||| | ||||| |||||||| |||||| |||| Sbjct: 1010 tggatttatatatgatgatgaagaatacaagaacgt 1045 Score = 61.9 bits (31), Expect = 5e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || ||||||||||| | Sbjct: 610 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtaccggga 669 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 670 gaggtgagattgtccaaga 688
>gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 map B68, complete sequence Length = 87978 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 11332 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 11391 Query: 528 ctatgggc 535 || ||||| Sbjct: 11392 ctctgggc 11399 Score = 42.1 bits (21), Expect = 5.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 951 agtggaagcacgattgtcggaattggttccccagacccacctgcgtttgtgtatgacgat 1010 ||||||||||| ||| |||| |||||||| ||||| || ||| ||| | ||||| ||| Sbjct: 12424 agtggaagcactattatcggtattggttcaccagatcctcctcaatttatatatgatgat 12483 Query: 1011 gaagactacaaggacgt 1027 ||||| |||||| |||| Sbjct: 12484 gaagaatacaagaacgt 12500
>gb|AF288615.1|AF288615 Arabidopsis thaliana 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (ISPE) mRNA, complete cds; chloroplast gene for chloroplast product Length = 1152 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 468 gataagaaggtcccaactggtgctggtcttggtggaggaagcagtaatgctgcaactgca 527 ||||||||||| || || || ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 481 gataagaaggtgcctaccggggctggactcggtggtggaagtagtaatgctgcaactgca 540 Query: 528 ctatgggc 535 || ||||| Sbjct: 541 ctctgggc 548 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 932 tgctgtttttatgtcaggaagtggaagcacgattgtcggaattggttccccagacccacc 991 |||||| |||||||| || ||||||||||| ||| |||| |||||||| ||||| || || Sbjct: 945 tgctgtgtttatgtctgggagtggaagcactattatcggtattggttcaccagatcctcc 1004 Query: 992 tgcgtttgtgtatgacgatgaagactacaaggacgt 1027 | ||| | ||||| |||||||| ||||||||||| Sbjct: 1005 tcaatttatatatgatgatgaagaatacaaggacgt 1040 Score = 61.9 bits (31), Expect = 5e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 592 gtgagattggatcagatatccccttcttcttttcacgaggagcagcatattgtaccggta 651 |||| ||||| |||||||| || |||||||| || | ||||| || ||||||||||| | Sbjct: 605 gtgaaattgggtcagatattcctttcttcttctcgcatggagctgcctattgtaccggga 664 Query: 652 gaggagagattgtccaaga 670 |||| |||||||||||||| Sbjct: 665 gaggtgagattgtccaaga 683 Score = 60.0 bits (30), Expect = 2e-05 Identities = 99/122 (81%) Strand = Plus / Plus Query: 213 ttctcaccttgcaaaattaatgtcttcttgaggataaccgggaagagaccagatgggttc 272 |||||||||||||| || ||||| ||||||||||| ||||| ||| || ||||||||| Sbjct: 226 ttctcaccttgcaagatcaatgttttcttgaggatcaccggaaagcgagaagatgggttt 285 Query: 273 catgacctggcttctctgtttcacgtggttagtttgggtgatactatcaaattctcactg 332 ||||| | || ||| ||||||| ||| |||| || || | ||||| ||||||||| || Sbjct: 286 catgatttagcctctttgtttcatgtgattagcttaggaggcactattaaattctcattg 345 Query: 333 tc 334 || Sbjct: 346 tc 347 Score = 46.1 bits (23), Expect = 0.32 Identities = 59/71 (83%) Strand = Plus / Plus Query: 702 atggttctaataaagccacctgaagcatgctcaaccgctgaagtttacaagcgactccgg 761 ||||| || |||||||| | |||||||| || || |||||||||||||| || || || Sbjct: 715 atggtgctcataaagccccgagaagcatgttccactgctgaagtttacaaacgtcttcgt 774 Query: 762 ttagatcagac 772 ||||||||||| Sbjct: 775 ttagatcagac 785
>tpg|BK000764.1| TPA_inf: Oryza sativa transposon Rim2-M178, complete sequence Length = 1139 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 ccgcgcccggcggcagccatggc 187 ||||||||||||||||||||||| Sbjct: 427 ccgcgcccggcggcagccatggc 449
>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1003C07, from chromosome 10, complete sequence Length = 115188 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 165 ccgcgcccggcggcagccatggc 187 ||||||||||||||||||||||| Sbjct: 70974 ccgcgcccggcggcagccatggc 70996
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 165 ccgcgcccggcggcagccatggc 187 ||||||||||||||||||||||| Sbjct: 11088083 ccgcgcccggcggcagccatggc 11088061
>dbj|AP006652.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT30M07, TM0331c, complete sequence Length = 56699 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1262 ataagaaaaatcgaatttgtaat 1284 ||||||||||||||||||||||| Sbjct: 48813 ataagaaaaatcgaatttgtaat 48791
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 ccgcgcccggcggcagccatgg 186 |||||||||||||||||||||| Sbjct: 57689 ccgcgcccggcggcagccatgg 57710
>ref|XM_584368.2| PREDICTED: Bos taurus similar to oxysterol-binding protein-like protein 10 (LOC507708), mRNA Length = 2658 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 cccgccagagccagagccagag 85 |||||||||||||||||||||| Sbjct: 186 cccgccagagccagagccagag 207
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 ggtcttggtggaggaagcagta 513 |||||||||||||||||||||| Sbjct: 3998096 ggtcttggtggaggaagcagta 3998075
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 152 atccggccggcgcccgcgcccg 173 |||||||||||||||||||||| Sbjct: 4461247 atccggccggcgcccgcgcccg 4461226
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 ccgcgcccggcggcagccatgg 186 |||||||||||||||||||||| Sbjct: 17183088 ccgcgcccggcggcagccatgg 17183109
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 cccgccagagccagagccagag 85 |||||||||||||||||||||| Sbjct: 87823 cccgccagagccagagccagag 87802
>gb|AF479069.1| Oryza eichingeri internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 593 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 cggcgcccgcgcccggcggcag 180 |||||||||||||||||||||| Sbjct: 61 cggcgcccgcgcccggcggcag 40
>ref|XM_447748.1| Candida glabrata CBS138, CAGL0J00825g partial mRNA Length = 1314 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 cccgccagagccagagccagag 85 |||||||||||||||||||||| Sbjct: 294 cccgccagagccagagccagag 273
>ref|XM_001144282.1| PREDICTED: Pan troglodytes phosphorylase kinase, gamma 2 (testis) (PHKG2), mRNA Length = 6000 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 gccccgccagagccagagcca 82 ||||||||||||||||||||| Sbjct: 3559 gccccgccagagccagagcca 3539
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 42.1 bits (21), Expect = 5.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 cttggtggaggaagcagtaatgctgcaac 523 |||||||||||||||||| | |||||||| Sbjct: 442193 cttggtggaggaagcagtgacgctgcaac 442221
>gb|DQ022603.1| Zea mays subsp. mexicana cultivar CIMMYT_11396 Opaque-2 (O2) gene, partial cds Length = 2051 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccgccagagccagagccagag 85 ||||||||||||||||||||| Sbjct: 293 ccgccagagccagagccagag 313
>gb|AC132262.2| Mus musculus chromosome 5 clone RP24-370J24, complete sequence Length = 176466 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 agaaaaagatcttcaagaatg 586 ||||||||||||||||||||| Sbjct: 118466 agaaaaagatcttcaagaatg 118446
>gb|AC113033.13| Mus musculus chromosome 7, clone RP23-220I5, complete sequence Length = 177962 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 922 gagattacagtgctgttttta 942 ||||||||||||||||||||| Sbjct: 99757 gagattacagtgctgttttta 99737
>gb|AC104101.5| Mus musculus BAC clone RP24-377D2 from chromosome 5, complete sequence Length = 185414 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 agaaaaagatcttcaagaatg 586 ||||||||||||||||||||| Sbjct: 70309 agaaaaagatcttcaagaatg 70329
>gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosome 15, complete sequence Length = 182040 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1171 tggtctcagttttgtggttgt 1191 ||||||||||||||||||||| Sbjct: 148057 tggtctcagttttgtggttgt 148037
>ref|XM_382160.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01984.1) partial mRNA Length = 669 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccgccagagccagagccagag 85 ||||||||||||||||||||| Sbjct: 86 ccgccagagccagagccagag 66
>gb|AC165051.2| Phakopsora pachyrhizi clone JGIAFNA-1077C21, complete sequence Length = 35591 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 tcagaaaaagatcttcaagaa 584 ||||||||||||||||||||| Sbjct: 15318 tcagaaaaagatcttcaagaa 15298
>emb|Z54073.2|HSN13E1 Human DNA sequence from clone LL22NC03-13E1 on chromosome 22 Contains ESTs, STSs and GSSs, complete sequence Length = 38761 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1035 tcagaggctcgctttctcact 1055 ||||||||||||||||||||| Sbjct: 21540 tcagaggctcgctttctcact 21560
>gb|AC159283.2| Mus musculus BAC clone RP23-317B21 from chromosome 12, complete sequence Length = 245361 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ccagagccagagccagagtgg 88 ||||||||||||||||||||| Sbjct: 169235 ccagagccagagccagagtgg 169255
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 cggcggcagccatggcgtgct 192 ||||||||||||||||||||| Sbjct: 375495 cggcggcagccatggcgtgct 375475
>emb|AL672272.10| Mouse DNA sequence from clone RP23-47N2 on chromosome 4 Contains the Rgs3 gene for regulator of G-protein signaling 3, three novel genes and a CpG island, complete sequence Length = 184345 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccgccagagccagagccagag 85 ||||||||||||||||||||| Sbjct: 77571 ccgccagagccagagccagag 77591
>dbj|AB042324.1| Gallus gallus CENP-C gene for centromere protein CENP-C, complete cds Length = 27630 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 catctcctcaacctgttctca 218 ||||||||||||||||||||| Sbjct: 1215 catctcctcaacctgttctca 1235
>emb|CT025548.8| Mouse DNA sequence from clone RP23-451I14 on chromosome 14, complete sequence Length = 176550 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ttcctttgcccgctcctcctc 133 ||||||||||||||||||||| Sbjct: 61547 ttcctttgcccgctcctcctc 61527
>gb|AC158387.2| Mus musculus BAC clone RP24-497K1 from chromosome 14, complete sequence Length = 128757 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ttcctttgcccgctcctcctc 133 ||||||||||||||||||||| Sbjct: 90530 ttcctttgcccgctcctcctc 90550 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 236,786,057 Number of extensions: 12275481 Number of successful extensions: 243505 Number of sequences better than 10.0: 47 Number of HSP's gapped: 243496 Number of HSP's successfully gapped: 100 Length of query: 1322 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1299 Effective length of database: 18,503,978,556 Effective search space: 24036668144244 Effective search space used: 24036668144244 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
