ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf82h16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073720.1| Oryza sativa (japonica cultivar-group) Os12g0596800 (Os12g0596800) mRNA, complete cds Length = 2196 Score = 809 bits (408), Expect = 0.0 Identities = 756/872 (86%) Strand = Plus / Plus Query: 665 cctcaagtggattcaggacttgtgctggatgcagaaagccaattggtcatgggcgttttc 724 |||||||||||| ||| |||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 737 cctcaagtggatccagaacttgtgctggatgcaaaaacccaattggtcatggacgttttc 796 Query: 725 ttagttgtatggatgaagtttggcatcctcagtgcttcaaatgttatgcttgcaataagc 784 |||| ||||||||| ||| ||||||||||||||||||| |||| |||||| || |||| Sbjct: 797 ttagctgtatggattcagtatggcatcctcagtgcttcaggtgttttgcttgtaacaagc 856 Query: 785 ccatatcagagtatgagtttgccatgcatgaagaccagccataccacaaatcctgctata 844 |||| || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct: 857 ccatctctgagtatgagtttgctatgcatgaagatcagccataccacaaatcatgctaca 916 Query: 845 aagacttttttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatg 904 |||| ||||| |||||||| |||||||||||||||||||||||||| || || | ||||| Sbjct: 917 aagattttttccatccaaaatgtgatgtctgcaagaactttattccaacgaacaggaatg 976 Query: 905 gcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaag 964 | ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 977 ggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttcccatgaag 1036 Query: 965 acggtggcactcctaggtgttgcagctgtgaaagaatggagccaacggacatcaaatata 1024 | | ||||||||||||||||||||| ||||||||||||||||| | |||||||||||| | Sbjct: 1037 atgatggcactcctaggtgttgcagttgtgaaagaatggagccgatggacatcaaataca 1096 Query: 1025 ttacattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatggact 1084 | ||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||| Sbjct: 1097 tcacattagatgatgggaggaaactctgcttggaatgtctcaattcttcaataatggata 1156 Query: 1085 ctcccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaatatga 1144 | || || || ||||| || || ||||| ||||||||||||||||||||| |||| |||| Sbjct: 1157 caccagagtgtcaacagctgtatatggacattcaggaattttttgaaggtctgaacatga 1216 Query: 1145 aagtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcgttgg 1204 |||| || || ||||||||| |||| ||||||||| | |||||||| ||||| || || | Sbjct: 1217 aagtggagcaacaagttccaatactcttggttgagagacaggctctaaatgaggctttag 1276 Query: 1205 aagctgagaaaagtggacatcaccttcctgaaaccaggggtctatgcctttctgaagaac 1264 || ||||||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 1277 aaactgagaaaaatgggcatcatcttcctgaaacaaggggactatgtctttctgaagagc 1336 Query: 1265 aaattgtcaaaactatcttaagaagaccaacaattggaccaggaaacagaattatggata 1324 ||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||| |||| Sbjct: 1337 aaattgtcagaacgatcttaagaagaccaataattggaccgggaaacagaattatagata 1396 Query: 1325 tgattacaggaccatacaagctggtccgacggtgtgaagtgactgccatcctaatactgt 1384 |||| |||| |||||| ||||||| |||| |||||||||||||| ||||| ||| | | Sbjct: 1397 tgatcacagcaccatataagctggaaagacgatgtgaagtgactgcaatcctgatattat 1456 Query: 1385 atggtctaccaagattgcaaactggctccattcttgctcacgagatgatgcacgcatatc 1444 |||| | || ||||| ||||||||||| ||||| || || || |||||||| || |||| Sbjct: 1457 atgggttgccgagattacaaactggctcaattctcgcccatgaaatgatgcatgcttatc 1516 Query: 1445 ttcgccttaaaggataccgatcccttagccctcaggttgaagaaggtatctgtcaagtcc 1504 | || || ||||||| || || ||||| ||||||||||||||||| || || ||||| | Sbjct: 1517 tacgtctgaaaggatttcggtctcttagtcctcaggttgaagaaggcatatgccaagttc 1576 Query: 1505 tatcccacatgtggctcgagtctgaaatcatc 1536 | |||||||||||||||||||| || |||||| Sbjct: 1577 tttcccacatgtggctcgagtcagagatcatc 1608 Score = 202 bits (102), Expect = 4e-48 Identities = 257/308 (83%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 320 tcatgggttggttaaacaaaatatttaaaggctcagtaaacagagtttcaaggggtcatt 379 |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 401 tcatgggttggttaaataaaatatttaaaggttcagtaaatagagtttcaaggggccatt 460 Query: 380 atgatggccactggcacgaaggcaacccatctgagcataccagagatgcatataatgaga 439 ||||||| |||||| ||||| | |||| || | |||||| || ||| |||| | Sbjct: 461 atgatggaagctggcatgaaggtcattcatcagataacgccagaggagcgtatgatgaaa 520 Query: 440 gcgacagtgaagatatagctcgtgctattgcattatccttagctgagcaagatccgaata 499 | || | ||||||||||| ||||||||||||| | || ||| | || ||| | |||| Sbjct: 521 gtgataatgaagatatagatcgtgctattgcactgtctttatcaga---agaacaaaata 577 Query: 500 agggaaaggctattgatcctgattatagtttggaggaagatgagcaacttgcacgagctc 559 ||||||| ||| ||||| ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 578 agggaaaagctgttgatatcgattataatttggaggaagatgaacaacttgcacgagctc 637 Query: 560 tccaggagagccttaataccgagtctcctcctcgtcaaaatgctcctgttgagaatgttc 619 ||||||||||||||||| | || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 638 tccaggagagccttaatgctgactctcctccacgtcagaatattcctgttgagaatgttc 697 Query: 620 catcagag 627 |||||||| Sbjct: 698 catcagag 705 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Plus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 1670 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 1729 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 1730 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 1789 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 1790 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 1849 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 1850 ctttcccatattgat 1864 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 2001 tttcttgttgtctttgaaataatacatgtaagtctt 2036
>dbj|AK062035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H07, full insert sequence Length = 1564 Score = 809 bits (408), Expect = 0.0 Identities = 756/872 (86%) Strand = Plus / Plus Query: 665 cctcaagtggattcaggacttgtgctggatgcagaaagccaattggtcatgggcgttttc 724 |||||||||||| ||| |||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 171 cctcaagtggatccagaacttgtgctggatgcaaaaacccaattggtcatggacgttttc 230 Query: 725 ttagttgtatggatgaagtttggcatcctcagtgcttcaaatgttatgcttgcaataagc 784 |||| ||||||||| ||| ||||||||||||||||||| |||| |||||| || |||| Sbjct: 231 ttagctgtatggattcagtatggcatcctcagtgcttcaggtgttttgcttgtaacaagc 290 Query: 785 ccatatcagagtatgagtttgccatgcatgaagaccagccataccacaaatcctgctata 844 |||| || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct: 291 ccatctctgagtatgagtttgctatgcatgaagatcagccataccacaaatcatgctaca 350 Query: 845 aagacttttttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatg 904 |||| ||||| |||||||| |||||||||||||||||||||||||| || || | ||||| Sbjct: 351 aagattttttccatccaaaatgtgatgtctgcaagaactttattccaacgaacaggaatg 410 Query: 905 gcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaag 964 | ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| Sbjct: 411 ggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttcccatgaag 470 Query: 965 acggtggcactcctaggtgttgcagctgtgaaagaatggagccaacggacatcaaatata 1024 | | ||||||||||||||||||||| ||||||||||||||||| | |||||||||||| | Sbjct: 471 atgatggcactcctaggtgttgcagttgtgaaagaatggagccgatggacatcaaataca 530 Query: 1025 ttacattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatggact 1084 | ||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||| Sbjct: 531 tcacattagatgatgggaggaaactctgcttggaatgtctcaattcttcaataatggata 590 Query: 1085 ctcccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaatatga 1144 | || || || ||||| || || ||||| ||||||||||||||||||||| |||| |||| Sbjct: 591 caccagagtgtcaacagctgtatatggacattcaggaattttttgaaggtctgaacatga 650 Query: 1145 aagtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcgttgg 1204 |||| || || ||||||||| |||| ||||||||| | |||||||| ||||| || || | Sbjct: 651 aagtggagcaacaagttccaatactcttggttgagagacaggctctaaatgaggctttag 710 Query: 1205 aagctgagaaaagtggacatcaccttcctgaaaccaggggtctatgcctttctgaagaac 1264 || ||||||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 711 aaactgagaaaaatgggcatcatcttcctgaaacaaggggactatgtctttctgaagagc 770 Query: 1265 aaattgtcaaaactatcttaagaagaccaacaattggaccaggaaacagaattatggata 1324 ||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||| |||| Sbjct: 771 aaattgtcagaacgatcttaagaagaccaataattggaccgggaaacagaattatagata 830 Query: 1325 tgattacaggaccatacaagctggtccgacggtgtgaagtgactgccatcctaatactgt 1384 |||| |||| |||||| ||||||| |||| |||||||||||||| ||||| ||| | | Sbjct: 831 tgatcacagcaccatataagctggaaagacgatgtgaagtgactgcaatcctgatattat 890 Query: 1385 atggtctaccaagattgcaaactggctccattcttgctcacgagatgatgcacgcatatc 1444 |||| | || ||||| ||||||||||| ||||| || || || |||||||| || |||| Sbjct: 891 atgggttgccgagattacaaactggctcaattctcgcccatgaaatgatgcatgcttatc 950 Query: 1445 ttcgccttaaaggataccgatcccttagccctcaggttgaagaaggtatctgtcaagtcc 1504 | || || ||||||| || || ||||| ||||||||||||||||| || || ||||| | Sbjct: 951 tacgtctgaaaggatttcggtctcttagtcctcaggttgaagaaggcatatgccaagttc 1010 Query: 1505 tatcccacatgtggctcgagtctgaaatcatc 1536 | |||||||||||||||||||| || |||||| Sbjct: 1011 tttcccacatgtggctcgagtcagagatcatc 1042 Score = 151 bits (76), Expect = 1e-32 Identities = 118/132 (89%) Strand = Plus / Plus Query: 496 aataagggaaaggctattgatcctgattatagtttggaggaagatgagcaacttgcacga 555 ||||||||||| ||| ||||| ||||||| ||||||||||||||| |||||||||||| Sbjct: 8 aataagggaaaagctgttgatatcgattataatttggaggaagatgaacaacttgcacga 67 Query: 556 gctctccaggagagccttaataccgagtctcctcctcgtcaaaatgctcctgttgagaat 615 ||||||||||||||||||||| | || |||||||| ||||| ||| ||||||||||||| Sbjct: 68 gctctccaggagagccttaatgctgactctcctccacgtcagaatattcctgttgagaat 127 Query: 616 gttccatcagag 627 |||||||||||| Sbjct: 128 gttccatcagag 139 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Plus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 1104 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 1163 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 1164 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 1223 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 1224 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 1283 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 1284 ctttcccatattgat 1298 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 1435 tttcttgttgtctttgaaataatacatgtaagtctt 1470
>dbj|AK065760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039D10, full insert sequence Length = 2197 Score = 801 bits (404), Expect = 0.0 Identities = 755/872 (86%) Strand = Plus / Plus Query: 665 cctcaagtggattcaggacttgtgctggatgcagaaagccaattggtcatgggcgttttc 724 |||||||||||| ||| |||||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 738 cctcaagtggatccagaacttgtgctggatgcaaaaacccaattggtcatggacgttttc 797 Query: 725 ttagttgtatggatgaagtttggcatcctcagtgcttcaaatgttatgcttgcaataagc 784 |||| ||||||||| ||| ||||||||||||||||||| |||| |||||| || |||| Sbjct: 798 ttagctgtatggattcagtatggcatcctcagtgcttcaggtgttttgcttgtaacaagc 857 Query: 785 ccatatcagagtatgagtttgccatgcatgaagaccagccataccacaaatcctgctata 844 |||| || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| | Sbjct: 858 ccatctctgagtatgagtttgctatgcatgaagatcagccataccacaaatcatgctaca 917 Query: 845 aagacttttttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatg 904 |||| ||||| |||||||| |||||||||||||||||||||||||| || || | ||||| Sbjct: 918 aagattttttccatccaaaatgtgatgtctgcaagaactttattccaacgaacaggaatg 977 Query: 905 gcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaag 964 | ||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||| Sbjct: 978 ggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttcgcatgaag 1037 Query: 965 acggtggcactcctaggtgttgcagctgtgaaagaatggagccaacggacatcaaatata 1024 | | ||||||||||||||||||||| ||||||||||||||||| | |||||||||||| | Sbjct: 1038 atgatggcactcctaggtgttgcagttgtgaaagaatggagccgatggacatcaaataca 1097 Query: 1025 ttacattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatggact 1084 | ||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||| Sbjct: 1098 tcacattagatgatgggaggaaactctgcttggaatgtctcaattcttcaataatggata 1157 Query: 1085 ctcccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaatatga 1144 | || || || ||||| || || ||||| ||||||||||||||||||||| |||| |||| Sbjct: 1158 caccagagtgtcaacagctgtatatggacattcaggaattttttgaaggtctgaacatga 1217 Query: 1145 aagtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcgttgg 1204 |||| || || ||||||||| |||| ||||||||| | |||||||| ||||| || || | Sbjct: 1218 aagtggagcaacaagttccaatactcttggttgagagacaggctctaaatgaggctttag 1277 Query: 1205 aagctgagaaaagtggacatcaccttcctgaaaccaggggtctatgcctttctgaagaac 1264 || ||||||||| ||| ||||| ||||||||||| ||||| ||||| ||||||||||| | Sbjct: 1278 aaactgagaaaaatgggcatcatcttcctgaaacaaggggactatgtctttctgaagagc 1337 Query: 1265 aaattgtcaaaactatcttaagaagaccaacaattggaccaggaaacagaattatggata 1324 ||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||| |||| Sbjct: 1338 aaattgtcagaacgatcttaagaagaccaataattggaccgggaaacagaattatagata 1397 Query: 1325 tgattacaggaccatacaagctggtccgacggtgtgaagtgactgccatcctaatactgt 1384 |||| |||| |||||| ||||||| |||| |||||||||||||| ||||| ||| | | Sbjct: 1398 tgatcacagcaccatataagctggaaagacgatgtgaagtgactgcaatcctgatattat 1457 Query: 1385 atggtctaccaagattgcaaactggctccattcttgctcacgagatgatgcacgcatatc 1444 |||| | || ||||| ||||||||||| ||||| || || || |||||||| || |||| Sbjct: 1458 atgggttgccgagattacaaactggctcaattctcgcccatgaaatgatgcatgcttatc 1517 Query: 1445 ttcgccttaaaggataccgatcccttagccctcaggttgaagaaggtatctgtcaagtcc 1504 | || || ||||||| || || ||||| ||||||||||||||||| || || ||||| | Sbjct: 1518 tacgtctgaaaggatttcggtctcttagtcctcaggttgaagaaggcatatgccaagttc 1577 Query: 1505 tatcccacatgtggctcgagtctgaaatcatc 1536 | |||||||||||||||||||| || |||||| Sbjct: 1578 tttcccacatgtggctcgagtcagagatcatc 1609 Score = 202 bits (102), Expect = 4e-48 Identities = 257/308 (83%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 320 tcatgggttggttaaacaaaatatttaaaggctcagtaaacagagtttcaaggggtcatt 379 |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 402 tcatgggttggttaaataaaatatttaaaggttcagtaaatagagtttcaaggggccatt 461 Query: 380 atgatggccactggcacgaaggcaacccatctgagcataccagagatgcatataatgaga 439 ||||||| |||||| ||||| | |||| || | |||||| || ||| |||| | Sbjct: 462 atgatggaagctggcatgaaggtcattcatcagataacgccagaggagcgtatgatgaaa 521 Query: 440 gcgacagtgaagatatagctcgtgctattgcattatccttagctgagcaagatccgaata 499 | || | ||||||||||| ||||||||||||| | || ||| | || ||| | |||| Sbjct: 522 gtgataatgaagatatagatcgtgctattgcactgtctttatcaga---agaacaaaata 578 Query: 500 agggaaaggctattgatcctgattatagtttggaggaagatgagcaacttgcacgagctc 559 ||||||| ||| ||||| ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 579 agggaaaagctgttgatatcgattataatttggaggaagatgaacaacttgcacgagctc 638 Query: 560 tccaggagagccttaataccgagtctcctcctcgtcaaaatgctcctgttgagaatgttc 619 ||||||||||||||||| | || |||||||| ||||| ||| ||||||||||||||||| Sbjct: 639 tccaggagagccttaatgctgactctcctccacgtcagaatattcctgttgagaatgttc 698 Query: 620 catcagag 627 |||||||| Sbjct: 699 catcagag 706 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Plus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 1671 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 1730 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 1731 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 1790 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 1791 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 1850 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 1851 ctttcccatattgat 1865 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 2002 tttcttgttgtctttgaaataatacatgtaagtctt 2037
>gb|AY224559.1| Oryza sativa (japonica cultivar-group) isolate 29050 unknown mRNA Length = 543 Score = 547 bits (276), Expect = e-152 Identities = 471/536 (87%) Strand = Plus / Plus Query: 703 ccaattggtcatgggcgttttcttagttgtatggatgaagtttggcatcctcagtgcttc 762 |||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 7 ccaattggtcatggacgttttcttagctgtatggattcagtatggcatcctcagtgcttc 66 Query: 763 aaatgttatgcttgcaataagcccatatcagagtatgagtttgccatgcatgaagaccag 822 | |||| |||||| || |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 67 aggtgttttgcttgtaacaagcccatctctgagtatgagtttgctatgcatgaagatcag 126 Query: 823 ccataccacaaatcctgctataaagacttttttcatccaaagtgtgatgtctgcaagaac 882 |||||||||||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 127 ccataccacaaatcatgctacaaagattttttccatccaaaatgtgatgtctgcaagaac 186 Query: 883 tttattccgacaaataagaatggcctgatcgaataccgagcacatcctttttggatgcaa 942 |||||||| || || | |||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 187 tttattccaacgaacaggaatgggctgatcgaataccgagcacatccattctggatgcaa 246 Query: 943 aagtactgcccttcccatgaagacggtggcactcctaggtgttgcagctgtgaaagaatg 1002 |||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 247 aagtactgtccttcccatgaagatgatggcactcctaggtgttgcagttgtgaaagaatg 306 Query: 1003 gagccaacggacatcaaatatattacattagatgatgggaggaaactgtgcttggaatgt 1062 ||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 307 gagccgatggacatcaaatacatcacattagatgatgggaggaaactctgcttggaatgt 366 Query: 1063 ctcacttctgcaacaatggactctcccgaatgccaacacctttacatggatattcaggaa 1122 |||| |||| ||| |||||| | || || || ||||| || || ||||| ||||||||| Sbjct: 367 ctcaattcttcaataatggatacaccagagtgtcaacagctgtatatggacattcaggaa 426 Query: 1123 ttttttgaaggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgt 1182 |||||||||||| |||| |||||||| || || ||||||||| |||| ||||||||| | Sbjct: 427 ttttttgaaggtctgaacatgaaagtggagcaacaagttccaatactcttggttgagaga 486 Query: 1183 caggctctgaatgaagcgttggaagctgagaaaagtggacatcaccttcctgaaac 1238 |||||||| ||||| || || ||| ||||||||| ||| ||||| ||||||||||| Sbjct: 487 caggctctaaatgaggctttagaaactgagaaaaatgggcatcatcttcctgaaac 542
>gb|AY224475.1| Oryza sativa (japonica cultivar-group) isolate 29050 disease resistance-like protein mRNA, partial cds Length = 543 Score = 547 bits (276), Expect = e-152 Identities = 471/536 (87%) Strand = Plus / Plus Query: 703 ccaattggtcatgggcgttttcttagttgtatggatgaagtttggcatcctcagtgcttc 762 |||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct: 7 ccaattggtcatggacgttttcttagctgtatggattcagtatggcatcctcagtgcttc 66 Query: 763 aaatgttatgcttgcaataagcccatatcagagtatgagtttgccatgcatgaagaccag 822 | |||| |||||| || |||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 67 aggtgttttgcttgtaacaagcccatctctgagtatgagtttgctatgcatgaagatcag 126 Query: 823 ccataccacaaatcctgctataaagacttttttcatccaaagtgtgatgtctgcaagaac 882 |||||||||||||| ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct: 127 ccataccacaaatcatgctacaaagattttttccatccaaaatgtgatgtctgcaagaac 186 Query: 883 tttattccgacaaataagaatggcctgatcgaataccgagcacatcctttttggatgcaa 942 |||||||| || || | |||||| ||||||||||||||||||||||| || ||||||||| Sbjct: 187 tttattccaacgaacaggaatgggctgatcgaataccgagcacatccattctggatgcaa 246 Query: 943 aagtactgcccttcccatgaagacggtggcactcctaggtgttgcagctgtgaaagaatg 1002 |||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 247 aagtactgtccttcccatgaagatgatggcactcctaggtgttgcagttgtgaaagaatg 306 Query: 1003 gagccaacggacatcaaatatattacattagatgatgggaggaaactgtgcttggaatgt 1062 ||||| | |||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 307 gagccgatggacatcaaatacatcacattagatgatgggaggaaactctgcttggaatgt 366 Query: 1063 ctcacttctgcaacaatggactctcccgaatgccaacacctttacatggatattcaggaa 1122 |||| |||| ||| |||||| | || || || ||||| || || ||||| ||||||||| Sbjct: 367 ctcaattcttcaataatggatacaccagagtgtcaacagctgtatatggacattcaggaa 426 Query: 1123 ttttttgaaggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgt 1182 |||||||||||| |||| |||||||| || || ||||||||| |||| ||||||||| | Sbjct: 427 ttttttgaaggtctgaacatgaaagtggagcaacaagttccaatactcttggttgagaga 486 Query: 1183 caggctctgaatgaagcgttggaagctgagaaaagtggacatcaccttcctgaaac 1238 |||||||| ||||| || || ||| ||||||||| ||| ||||| ||||||||||| Sbjct: 487 caggctctaaatgaggctttagaaactgagaaaaatgggcatcatcttcctgaaac 542
>gb|BT016955.1| Zea mays clone E04912705F06.c mRNA sequence Length = 974 Score = 464 bits (234), Expect = e-127 Identities = 554/660 (83%), Gaps = 3/660 (0%) Strand = Plus / Minus Query: 1119 ggaattttttgaaggtttgaatatgaaagtagaacagcaagttccattacttttggttga 1178 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 968 ggaattttttgaaggtttgaacatgaaagtagaacagcaaattccattacttttggttga 909 Query: 1179 gcgtcaggctctgaatgaagcgttggaagctgagaaaagtggacatcaccttcctgaaac 1238 | | |||||||| |||||||| |||||||| ||||||| ||| || ||||| || ||||| Sbjct: 908 gaggcaggctcttaatgaagccttggaagccgagaaaaatgggcaccacctaccggaaac 849 Query: 1239 caggggtctatgcctttctgaagaacaaattgtcaaaactatcttaagaagaccaacaat 1298 ||| ||||||||||||||||| || ||| |||| | ||| ||||||| ||||||| || Sbjct: 848 cagaggtctatgcctttctgaggagcaagttgttagaacgatcttaaaaagaccacagat 789 Query: 1299 tggaccaggaaacagaattatggatatgattacaggaccatacaagctggtccgacggtg 1358 |||||||||||||||||| | |||||||||| |||||||||||||||| || ||||| Sbjct: 788 tggaccaggaaacagaatcttagatatgattataggaccatacaagctgtctcggcggtg 729 Query: 1359 tgaagtgactgccatcctaatactgtatggtctaccaagattgcaaactggctccattct 1418 |||||||||||| ||||| ||| | |||||||| |||||||| |||||||| |||||||| Sbjct: 728 tgaagtgactgcaatccttatattatatggtctgccaagattacaaactggttccattct 669 Query: 1419 tgctcacgagatgatgcacgcatatcttcgccttaaaggataccgatcccttagccctca 1478 ||| || ||||||||||| ||||||||||| || ||||||| |||| |||||| | | Sbjct: 668 tgcccatgagatgatgcatgcatatcttcgtctcaaaggattccgaaaccttagtattga 609 Query: 1479 ggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtctgaaatcatcgc 1538 |||||||||||| ||||| ||||| ||||||||| ||||| | ||||| ||||||||||| Sbjct: 608 ggttgaagaaggcatctgccaagttctatcccacctgtggttagagtcggaaatcatcgc 549 Query: 1539 gggtgctagtggcaacaccgcttccacctc---agcatcatcatcgtcttcgtcggcagc 1595 ||| ||||| ||||| || |||| || |||||||||||| || || || |||| Sbjct: 548 tggttctagtagcaacgttgcatccagttcagaagcatcatcatcttcgtcatcctcagc 489 Query: 1596 tcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttcat 1655 ||||||| |||| |||||||| || ||||| ||||| |||||||| || ||||| ||||| Sbjct: 488 tcctacctcttcaaagaagggtgcgaagaccgaattcgagaagaagcttggggcattcat 429 Query: 1656 caagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggcat 1715 |||| | ||||||||||| ||||| |||| || ||| || | ||||||| | || ||| Sbjct: 428 caagcaccagatcgaaacggattcttccgaggcatacggaggtggttttagagctggcta 369 Query: 1716 tcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggtc 1775 || ||| ||||| | |||||||||| ||| |||||||||||||||||| | |||||||| Sbjct: 368 tccggctgttgagcgctatggcttgaaaagaacccttgatcatatgaagttgacagggtc 309
>ref|NM_001057237.1| Oryza sativa (japonica cultivar-group) Os03g0626600 (Os03g0626600) mRNA, partial cds Length = 2098 Score = 412 bits (208), Expect = e-111 Identities = 706/872 (80%) Strand = Plus / Plus Query: 661 ttcccctcaagtggattcaggacttgtgctggatgcagaaagccaattggtcatgggcgt 720 ||||| |||| |||||| ||| |||||||||||| | || ||||| ||||| || || Sbjct: 592 ttcccttcaactggattaagggtttgtgctggatgtaaaactccaatcggtcaaggacgg 651 Query: 721 tttcttagttgtatggatgaagtttggcatcctcagtgcttcaaatgttatgcttgcaat 780 ||||||||||| |||||| |||||||| || |||||||||| |||| |||||| || Sbjct: 652 tttcttagttgcatggattctgtttggcacccccagtgcttcaggtgttttgcttgtgat 711 Query: 781 aagcccatatcagagtatgagtttgccatgcatgaagaccagccataccacaaatcctgc 840 | ||| |||||||| ||||||||||| | ||||||| | |||||||| ||||||| Sbjct: 712 aggccaatatcagaatatgagtttgcagttcatgaaggtaacccataccatcgatcctgc 771 Query: 841 tataaagacttttttcatccaaagtgtgatgtctgcaagaactttattccgacaaataag 900 ||||| || |||| |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 772 tataaggagcttttccatccaaaatgtgatgtctgcaagaactttattccaacaaacaaa 831 Query: 901 aatggcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttcccat 960 |||||| || ||||| || || |||||||| |||||||| ||||| || ||| ||||| Sbjct: 832 gatggccacattgaatatcgggcccatcctttctggatgcagaagtattgtcctgcccat 891 Query: 961 gaagacggtggcactcctaggtgttgcagctgtgaaagaatggagccaacggacatcaaa 1020 ||| | | | ||||||||||| ||||| |||||| |||||||||||| ||| | || Sbjct: 892 gaaactgatcgtactcctaggtgctgcagttgtgaacgaatggagccaaaggatagtaag 951 Query: 1021 tatattacattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatg 1080 || || |||||||||||||| ||||||| || |||||||| || | | || ||| |||| Sbjct: 952 tacataacattagatgatggccggaaactctgtttggaatgcctgaatacttcaataatg 1011 Query: 1081 gactctcccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaat 1140 ||| | ||||||||||| || || || |||||||| ||||| | ||| |||||||| Sbjct: 1012 gacacagacgaatgccaaccactatatattgatattcaagaattctatgagggtttgaac 1071 Query: 1141 atgaaagtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcg 1200 |||||||| ||||| ||| |||| || || ||||||||||| || ||| | |||||||| Sbjct: 1072 atgaaagtggaacaacaaattcccttgctgttggttgagcgacaagctttaaatgaagcc 1131 Query: 1201 ttggaagctgagaaaagtggacatcaccttcctgaaaccaggggtctatgcctttctgaa 1260 |||| || ||||||| ||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 1132 atggaggccgagaaaactggacatcaccttgctgaaaccagaggtctctgcctatctgaa 1191 Query: 1261 gaacaaattgtcaaaactatcttaagaagaccaacaattggaccaggaaacagaattatg 1320 || ||||||||| |||||| ||||||||||| ||||||||||||||||| ||| | Sbjct: 1192 gagcaaattgtccgaactatactaagaagaccagtaattggaccaggaaacaagattgta 1251 Query: 1321 gatatgattacaggaccatacaagctggtccgacggtgtgaagtgactgccatcctaata 1380 || |||||||||||||||||||| ||||| |||| |||||||||||||| || || || Sbjct: 1252 gacatgattacaggaccatacaaactggttagacgctgtgaagtgactgcaattcttatc 1311 Query: 1381 ctgtatggtctaccaagattgcaaactggctccattcttgctcacgagatgatgcacgca 1440 || ||||| || |||||| || ||||||||||||||| ||||| ||||||||||| || Sbjct: 1312 ctatatggccttccaagactgttaactggctccattctggctcatgagatgatgcatgct 1371 Query: 1441 tatcttcgccttaaaggataccgatcccttagccctcaggttgaagaaggtatctgtcaa 1500 || || || ||||| ||||||| | | ||| || |||| |||||||| |||||||| Sbjct: 1372 tacctccgacttaagggataccaaactcttgatccaaaggtcgaagaaggcatctgtcag 1431 Query: 1501 gtcctatcccacatgtggctcgagtctgaaat 1532 || ||| | || |||||||||||||| ||||| Sbjct: 1432 gttctagctcatatgtggctcgagtcagaaat 1463 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 1689 atatggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtac 1748 |||||| ||||||||||| | |||||| |||| ||||||| ||||||||||||| || Sbjct: 1623 atatggagatggttttcgagatggcattaaggccgttgaacgctatggcttgagaaaaac 1682 Query: 1749 ccttgatcatatgaagctaacaggg 1773 ||||||||||||||||| |||||| Sbjct: 1683 tcttgatcatatgaagcttacaggg 1707 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 447 tgaagatatagctcgtgctattgcattatc 476 |||||| |||| |||||||||||||||||| Sbjct: 372 tgaagacatagatcgtgctattgcattatc 401
>dbj|AK066665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O11, full insert sequence Length = 2102 Score = 412 bits (208), Expect = e-111 Identities = 706/872 (80%) Strand = Plus / Plus Query: 661 ttcccctcaagtggattcaggacttgtgctggatgcagaaagccaattggtcatgggcgt 720 ||||| |||| |||||| ||| |||||||||||| | || ||||| ||||| || || Sbjct: 595 ttcccttcaactggattaagggtttgtgctggatgtaaaactccaatcggtcaaggacgg 654 Query: 721 tttcttagttgtatggatgaagtttggcatcctcagtgcttcaaatgttatgcttgcaat 780 ||||||||||| |||||| |||||||| || |||||||||| |||| |||||| || Sbjct: 655 tttcttagttgcatggattctgtttggcacccccagtgcttcaggtgttttgcttgtgat 714 Query: 781 aagcccatatcagagtatgagtttgccatgcatgaagaccagccataccacaaatcctgc 840 | ||| |||||||| ||||||||||| | ||||||| | |||||||| ||||||| Sbjct: 715 aggccaatatcagaatatgagtttgcagttcatgaaggtaacccataccatcgatcctgc 774 Query: 841 tataaagacttttttcatccaaagtgtgatgtctgcaagaactttattccgacaaataag 900 ||||| || |||| |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 775 tataaggagcttttccatccaaaatgtgatgtctgcaagaactttattccaacaaacaaa 834 Query: 901 aatggcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttcccat 960 |||||| || ||||| || || |||||||| |||||||| ||||| || ||| ||||| Sbjct: 835 gatggccgcattgaatatcgggcccatcctttctggatgcagaagtattgtcctgcccat 894 Query: 961 gaagacggtggcactcctaggtgttgcagctgtgaaagaatggagccaacggacatcaaa 1020 ||| | | | ||||||||||| ||||| |||||| |||||||||||| ||| | || Sbjct: 895 gaaactgatcgtactcctaggtgctgcagttgtgaacgaatggagccaaaggatagtaag 954 Query: 1021 tatattacattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatg 1080 || || |||||||||||||| ||||||| || |||||||| || | | || ||| |||| Sbjct: 955 tacataacattagatgatggccggaaactctgtttggaatgcctgaatacttcaataatg 1014 Query: 1081 gactctcccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaat 1140 ||| | ||||||||||| || || || |||||||| ||||| | ||| |||||||| Sbjct: 1015 gacacagacgaatgccaaccactatatattgatattcaagaattctatgagggtttgaac 1074 Query: 1141 atgaaagtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcg 1200 |||||||| ||||| ||| |||| || || ||||||||||| || ||| | |||||||| Sbjct: 1075 atgaaagtggaacaacaaattcccttgctgttggttgagcgacaagctttaaatgaagcc 1134 Query: 1201 ttggaagctgagaaaagtggacatcaccttcctgaaaccaggggtctatgcctttctgaa 1260 |||| || ||||||| ||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 1135 atggaggccgagaaaactggacatcaccttgctgaaaccagaggtctctgcctatctgaa 1194 Query: 1261 gaacaaattgtcaaaactatcttaagaagaccaacaattggaccaggaaacagaattatg 1320 || ||||||||| |||||| ||||||||||| ||||||||||||||||| ||| | Sbjct: 1195 gagcaaattgtccgaactatactaagaagaccagtaattggaccaggaaacaagattgta 1254 Query: 1321 gatatgattacaggaccatacaagctggtccgacggtgtgaagtgactgccatcctaata 1380 || |||||||||||||||||||| ||||| |||| |||||||||||||| || || || Sbjct: 1255 gacatgattacaggaccatacaaactggttagacgctgtgaagtgactgcaattcttatc 1314 Query: 1381 ctgtatggtctaccaagattgcaaactggctccattcttgctcacgagatgatgcacgca 1440 || ||||| || |||||| || ||||||||||||||| ||||| ||||||||||| || Sbjct: 1315 ctatatggccttccaagactgttaactggctccattctggctcatgagatgatgcatgct 1374 Query: 1441 tatcttcgccttaaaggataccgatcccttagccctcaggttgaagaaggtatctgtcaa 1500 || || || ||||| ||||||| | | ||| || |||| |||||||| |||||||| Sbjct: 1375 tacctccgacttaagggataccaaactcttgatccaaaggtcgaagaaggcatctgtcag 1434 Query: 1501 gtcctatcccacatgtggctcgagtctgaaat 1532 || ||| | || |||||||||||||| ||||| Sbjct: 1435 gttctagctcatatgtggctcgagtcagaaat 1466 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 1689 atatggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtac 1748 |||||| ||||||||||| | |||||| |||| ||||||| ||||||||||||| || Sbjct: 1626 atatggagatggttttcgagatggcattaaggccgttgaacgctatggcttgagaaaaac 1685 Query: 1749 ccttgatcatatgaagctaacaggg 1773 ||||||||||||||||| |||||| Sbjct: 1686 tcttgatcatatgaagcttacaggg 1710 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 447 tgaagatatagctcgtgctattgcattatc 476 |||||| |||| |||||||||||||||||| Sbjct: 375 tgaagacatagatcgtgctattgcattatc 404
>gb|AY109151.1| Zea mays PCO156068 mRNA sequence Length = 1078 Score = 184 bits (93), Expect = 9e-43 Identities = 311/383 (81%), Gaps = 3/383 (0%) Strand = Plus / Plus Query: 1396 agattgcaaactggctccattcttgctcacgagatgatgcacgcatatcttcgccttaaa 1455 ||||| |||||||| ||||||||||| || ||||||||||| ||||||||||| || ||| Sbjct: 408 agattacaaactggttccattcttgcccatgagatgatgcatgcatatcttcgtctcaaa 467 Query: 1456 ggataccgatcccttagccctcaggttgaagaaggtatctgtcaagtcctatcccacatg 1515 |||| |||| |||||| | ||||||||||||| ||||| ||||| |||||||| || Sbjct: 468 ggattccgaaaccttagtattgaggttgaagaaggcatctgccaagttttatcccacctg 527 Query: 1516 tggctcgagtctgaaatcatcgcgggtgctagtggcaacaccgcttccacctc---agca 1572 ||| | ||||| ||||||||||| ||| ||||| ||||| || |||| || |||| Sbjct: 528 tggttagagtcggaaatcatcgctggttctagtagcaacgttgcatccagttcagaagca 587 Query: 1573 tcatcatcgtcttcgtcggcagctcctaccacttcgaagaagggagcaaagacagaattt 1632 |||||||| || || || ||||| ||||| |||| |||||||| || ||||| ||||| Sbjct: 588 tcatcatcttcatcatcctcagctgctacctcttcaaagaagggtgcgaagaccgaattc 647 Query: 1633 gagaagaaactcggggcgttcatcaagaatcagatcgaaacagattcgtccgtggaatat 1692 |||||||| || ||||| ||||||||| | ||||||||||| ||||| |||| || ||| Sbjct: 648 gagaagaagcttggggcattcatcaagcaccagatcgaaacggattcttccgaggcatac 707 Query: 1693 ggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtaccctt 1752 || | ||||||| | || ||| || ||| ||||| | |||||||||| ||| |||||| Sbjct: 708 ggaggtggttttagagctggctatccggctgttgagcgctatggcttgaaaagaaccctt 767 Query: 1753 gatcatatgaagctaacagggtc 1775 |||||||||||| | |||||||| Sbjct: 768 gatcatatgaagttgacagggtc 790
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 170 bits (86), Expect = 1e-38 Identities = 176/206 (85%) Strand = Plus / Plus Query: 1011 ggacatcaaatatattacattagatgatgggaggaaactgtgcttggaatgtctcacttc 1070 |||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 25088694 ggacatcaaatacatcacattagatgatgggaggaaactctgcttggaatgtctcaattc 25088753 Query: 1071 tgcaacaatggactctcccgaatgccaacacctttacatggatattcaggaattttttga 1130 | ||| |||||| | || || || ||||| || || ||||| ||||||||||||||||| Sbjct: 25088754 ttcaataatggatacaccagagtgtcaacagctgtatatggacattcaggaattttttga 25088813 Query: 1131 aggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgtcaggctct 1190 |||| |||| |||||||| || || ||||||||| |||| ||||||||| | |||||||| Sbjct: 25088814 aggtctgaacatgaaagtggagcaacaagttccaatactcttggttgagagacaggctct 25088873 Query: 1191 gaatgaagcgttggaagctgagaaaa 1216 ||||| || || ||| ||||||||| Sbjct: 25088874 aaatgaggctttagaaactgagaaaa 25088899 Score = 155 bits (78), Expect = 8e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 900 gaatggcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttccca 959 |||||| ||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 25088057 gaatgggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttccca 25088116 Query: 960 tgaagacggtggcactcctaggtgttgcagctgtgaaagaatggag 1005 |||||| | ||||||||||||||||||||| ||||||||||||||| Sbjct: 25088117 tgaagatgatggcactcctaggtgttgcagttgtgaaagaatggag 25088162 Score = 143 bits (72), Expect = 3e-30 Identities = 99/108 (91%) Strand = Plus / Plus Query: 520 gattatagtttggaggaagatgagcaacttgcacgagctctccaggagagccttaatacc 579 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 25087084 gattataatttggaggaagatgaacaacttgcacgagctctccaggagagccttaatgct 25087143 Query: 580 gagtctcctcctcgtcaaaatgctcctgttgagaatgttccatcagag 627 || |||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 25087144 gactctcctccacgtcagaatattcctgttgagaatgttccatcagag 25087191 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Plus Query: 682 acttgtgctggatgcagaaagccaattggtcatgggcgttttcttagttgtatggatgaa 741 |||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| | Sbjct: 25087660 acttgtgctggatgcaaaaacccaattggtcatggacgttttcttagctgtatggattca 25087719 Query: 742 gtttggcatcctcagtgcttcaaatgttatgcttgcaataagcccatatcagagtatgag 801 || ||||||||||||||||||| |||| |||||| || |||||||| || ||||||||| Sbjct: 25087720 gtatggcatcctcagtgcttcaggtgttttgcttgtaacaagcccatctctgagtatgag 25087779 Score = 115 bits (58), Expect = 7e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 800 agtttgccatgcatgaagaccagccataccacaaatcctgctataaagacttttttcatc 859 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||| Sbjct: 25087857 agtttgctatgcatgaagatcagccataccacaaatcatgctacaaagattttttccatc 25087916 Query: 860 caaagtgtgatgtctgcaagaacttt 885 |||| ||||||||||||||||||||| Sbjct: 25087917 caaaatgtgatgtctgcaagaacttt 25087942 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 1279 atcttaagaagaccaacaattggaccaggaaacagaattatggatatgattacaggacca 1338 |||||||||||||||| ||||||||| |||||||||||||| |||||||| |||| |||| Sbjct: 25089144 atcttaagaagaccaataattggaccgggaaacagaattatagatatgatcacagcacca 25089203 Query: 1339 tacaagctggtccgacggtgtgaagtgactgccatcct 1376 || ||||||| |||| |||||||||||||| ||||| Sbjct: 25089204 tataagctggaaagacgatgtgaagtgactgcaatcct 25089241 Score = 101 bits (51), Expect = 1e-17 Identities = 63/67 (94%) Strand = Plus / Plus Query: 320 tcatgggttggttaaacaaaatatttaaaggctcagtaaacagagtttcaaggggtcatt 379 |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 25086577 tcatgggttggttaaataaaatatttaaaggttcagtaaatagagtttcaaggggccatt 25086636 Query: 380 atgatgg 386 ||||||| Sbjct: 25086637 atgatgg 25086643 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Plus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 25089726 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 25089785 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 25089786 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 25089845 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 25089846 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 25089905 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 25089906 ctttcccatattgat 25089920 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1468 cttagccctcaggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtct 1527 ||||| ||||||||||||||||| || || ||||| || |||||||||||||||||||| Sbjct: 25089596 cttagtcctcaggttgaagaaggcatatgccaagttctttcccacatgtggctcgagtca 25089655 Query: 1528 gaaatcatc 1536 || |||||| Sbjct: 25089656 gagatcatc 25089664 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 1222 catcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtca 1273 ||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||| Sbjct: 25088998 catcatcttcctgaaacaaggggactatgtctttctgaagagcaaattgtca 25089049 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 25090057 tttcttgttgtctttgaaataatacatgtaagtctt 25090092 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 447 tgaagatatagctcgtgctattgca 471 ||||||||||| ||||||||||||| Sbjct: 25086858 tgaagatatagatcgtgctattgca 25086882
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 170 bits (86), Expect = 1e-38 Identities = 176/206 (85%) Strand = Plus / Minus Query: 1011 ggacatcaaatatattacattagatgatgggaggaaactgtgcttggaatgtctcacttc 1070 |||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 42785 ggacatcaaatacatcacattagatgatgggaggaaactctgcttggaatgtctcaattc 42726 Query: 1071 tgcaacaatggactctcccgaatgccaacacctttacatggatattcaggaattttttga 1130 | ||| |||||| | || || || ||||| || || ||||| ||||||||||||||||| Sbjct: 42725 ttcaataatggatacaccagagtgtcaacagctgtatatggacattcaggaattttttga 42666 Query: 1131 aggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgtcaggctct 1190 |||| |||| |||||||| || || ||||||||| |||| ||||||||| | |||||||| Sbjct: 42665 aggtctgaacatgaaagtggagcaacaagttccaatactcttggttgagagacaggctct 42606 Query: 1191 gaatgaagcgttggaagctgagaaaa 1216 ||||| || || ||| ||||||||| Sbjct: 42605 aaatgaggctttagaaactgagaaaa 42580 Score = 155 bits (78), Expect = 8e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 900 gaatggcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttccca 959 |||||| ||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 43422 gaatgggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttccca 43363 Query: 960 tgaagacggtggcactcctaggtgttgcagctgtgaaagaatggag 1005 |||||| | ||||||||||||||||||||| ||||||||||||||| Sbjct: 43362 tgaagatgatggcactcctaggtgttgcagttgtgaaagaatggag 43317 Score = 143 bits (72), Expect = 3e-30 Identities = 99/108 (91%) Strand = Plus / Minus Query: 520 gattatagtttggaggaagatgagcaacttgcacgagctctccaggagagccttaatacc 579 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 44395 gattataatttggaggaagatgaacaacttgcacgagctctccaggagagccttaatgct 44336 Query: 580 gagtctcctcctcgtcaaaatgctcctgttgagaatgttccatcagag 627 || |||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 44335 gactctcctccacgtcagaatattcctgttgagaatgttccatcagag 44288 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Minus Query: 682 acttgtgctggatgcagaaagccaattggtcatgggcgttttcttagttgtatggatgaa 741 |||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| | Sbjct: 43819 acttgtgctggatgcaaaaacccaattggtcatggacgttttcttagctgtatggattca 43760 Query: 742 gtttggcatcctcagtgcttcaaatgttatgcttgcaataagcccatatcagagtatgag 801 || ||||||||||||||||||| |||| |||||| || |||||||| || ||||||||| Sbjct: 43759 gtatggcatcctcagtgcttcaggtgttttgcttgtaacaagcccatctctgagtatgag 43700 Score = 115 bits (58), Expect = 7e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 800 agtttgccatgcatgaagaccagccataccacaaatcctgctataaagacttttttcatc 859 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||| Sbjct: 43622 agtttgctatgcatgaagatcagccataccacaaatcatgctacaaagattttttccatc 43563 Query: 860 caaagtgtgatgtctgcaagaacttt 885 |||| ||||||||||||||||||||| Sbjct: 43562 caaaatgtgatgtctgcaagaacttt 43537 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1279 atcttaagaagaccaacaattggaccaggaaacagaattatggatatgattacaggacca 1338 |||||||||||||||| ||||||||| |||||||||||||| |||||||| |||| |||| Sbjct: 42335 atcttaagaagaccaataattggaccgggaaacagaattatagatatgatcacagcacca 42276 Query: 1339 tacaagctggtccgacggtgtgaagtgactgccatcct 1376 || ||||||| |||| |||||||||||||| ||||| Sbjct: 42275 tataagctggaaagacgatgtgaagtgactgcaatcct 42238 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Minus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 41753 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 41694 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 41693 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 41634 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 41633 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 41574 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 41573 ctttcccatattgat 41559 Score = 101 bits (51), Expect = 1e-17 Identities = 63/67 (94%) Strand = Plus / Minus Query: 320 tcatgggttggttaaacaaaatatttaaaggctcagtaaacagagtttcaaggggtcatt 379 |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 44902 tcatgggttggttaaataaaatatttaaaggttcagtaaatagagtttcaaggggccatt 44843 Query: 380 atgatgg 386 ||||||| Sbjct: 44842 atgatgg 44836 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 1468 cttagccctcaggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtct 1527 ||||| ||||||||||||||||| || || ||||| || |||||||||||||||||||| Sbjct: 41883 cttagtcctcaggttgaagaaggcatatgccaagttctttcccacatgtggctcgagtca 41824 Query: 1528 gaaatcatc 1536 || |||||| Sbjct: 41823 gagatcatc 41815 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1222 catcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtca 1273 ||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||| Sbjct: 42481 catcatcttcctgaaacaaggggactatgtctttctgaagagcaaattgtca 42430 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 41422 tttcttgttgtctttgaaataatacatgtaagtctt 41387 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 447 tgaagatatagctcgtgctattgca 471 ||||||||||| ||||||||||||| Sbjct: 44621 tgaagatatagatcgtgctattgca 44597
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 170 bits (86), Expect = 1e-38 Identities = 176/206 (85%) Strand = Plus / Minus Query: 1011 ggacatcaaatatattacattagatgatgggaggaaactgtgcttggaatgtctcacttc 1070 |||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 18478 ggacatcaaatacatcacattagatgatgggaggaaactctgcttggaatgtctcaattc 18419 Query: 1071 tgcaacaatggactctcccgaatgccaacacctttacatggatattcaggaattttttga 1130 | ||| |||||| | || || || ||||| || || ||||| ||||||||||||||||| Sbjct: 18418 ttcaataatggatacaccagagtgtcaacagctgtatatggacattcaggaattttttga 18359 Query: 1131 aggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgtcaggctct 1190 |||| |||| |||||||| || || ||||||||| |||| ||||||||| | |||||||| Sbjct: 18358 aggtctgaacatgaaagtggagcaacaagttccaatactcttggttgagagacaggctct 18299 Query: 1191 gaatgaagcgttggaagctgagaaaa 1216 ||||| || || ||| ||||||||| Sbjct: 18298 aaatgaggctttagaaactgagaaaa 18273 Score = 155 bits (78), Expect = 8e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 900 gaatggcctgatcgaataccgagcacatcctttttggatgcaaaagtactgcccttccca 959 |||||| ||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 19115 gaatgggctgatcgaataccgagcacatccattctggatgcaaaagtactgtccttccca 19056 Query: 960 tgaagacggtggcactcctaggtgttgcagctgtgaaagaatggag 1005 |||||| | ||||||||||||||||||||| ||||||||||||||| Sbjct: 19055 tgaagatgatggcactcctaggtgttgcagttgtgaaagaatggag 19010 Score = 143 bits (72), Expect = 3e-30 Identities = 99/108 (91%) Strand = Plus / Minus Query: 520 gattatagtttggaggaagatgagcaacttgcacgagctctccaggagagccttaatacc 579 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 20088 gattataatttggaggaagatgaacaacttgcacgagctctccaggagagccttaatgct 20029 Query: 580 gagtctcctcctcgtcaaaatgctcctgttgagaatgttccatcagag 627 || |||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 20028 gactctcctccacgtcagaatattcctgttgagaatgttccatcagag 19981 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Minus Query: 682 acttgtgctggatgcagaaagccaattggtcatgggcgttttcttagttgtatggatgaa 741 |||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| | Sbjct: 19512 acttgtgctggatgcaaaaacccaattggtcatggacgttttcttagctgtatggattca 19453 Query: 742 gtttggcatcctcagtgcttcaaatgttatgcttgcaataagcccatatcagagtatgag 801 || ||||||||||||||||||| |||| |||||| || |||||||| || ||||||||| Sbjct: 19452 gtatggcatcctcagtgcttcaggtgttttgcttgtaacaagcccatctctgagtatgag 19393 Score = 115 bits (58), Expect = 7e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 800 agtttgccatgcatgaagaccagccataccacaaatcctgctataaagacttttttcatc 859 ||||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||| Sbjct: 19315 agtttgctatgcatgaagatcagccataccacaaatcatgctacaaagattttttccatc 19256 Query: 860 caaagtgtgatgtctgcaagaacttt 885 |||| ||||||||||||||||||||| Sbjct: 19255 caaaatgtgatgtctgcaagaacttt 19230 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Minus Query: 1279 atcttaagaagaccaacaattggaccaggaaacagaattatggatatgattacaggacca 1338 |||||||||||||||| ||||||||| |||||||||||||| |||||||| |||| |||| Sbjct: 18028 atcttaagaagaccaataattggaccgggaaacagaattatagatatgatcacagcacca 17969 Query: 1339 tacaagctggtccgacggtgtgaagtgactgccatcct 1376 || ||||||| |||| |||||||||||||| ||||| Sbjct: 17968 tataagctggaaagacgatgtgaagtgactgcaatcct 17931 Score = 101 bits (51), Expect = 1e-17 Identities = 159/195 (81%) Strand = Plus / Minus Query: 1595 ctcctaccacttcgaagaagggagcaaagacagaatttgagaagaaactcggggcgttca 1654 |||| ||||| || |||||||| |||||||| ||||| |||||||| ||||| || |||| Sbjct: 17446 ctccaaccacatcaaagaagggcgcaaagaccgaattcgagaagaagctcggagcattca 17387 Query: 1655 tcaagaatcagatcgaaacagattcgtccgtggaatatggggatggttttcgggcaggca 1714 |||| ||||||||||||| ||||| || | || ||| || ||||||||||| || | || Sbjct: 17386 tcaaacatcagatcgaaacggattcatctgaggcatacggagatggttttcgagctgcca 17327 Query: 1715 ttcaggcggttgaacaatatggcttgagaagtacccttgatcatatgaagctaacagggt 1774 || ||| || ||| |||||| |||||||||||||| |||||||||| | ||||||| Sbjct: 17326 atcgggctgtcgaaagctatggcctgagaagtacccttaatcatatgaaaatgacagggt 17267 Query: 1775 cctttccttattgat 1789 | || || ||||||| Sbjct: 17266 ctttcccatattgat 17252 Score = 101 bits (51), Expect = 1e-17 Identities = 63/67 (94%) Strand = Plus / Minus Query: 320 tcatgggttggttaaacaaaatatttaaaggctcagtaaacagagtttcaaggggtcatt 379 |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||| Sbjct: 20595 tcatgggttggttaaataaaatatttaaaggttcagtaaatagagtttcaaggggccatt 20536 Query: 380 atgatgg 386 ||||||| Sbjct: 20535 atgatgg 20529 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 1468 cttagccctcaggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtct 1527 ||||| ||||||||||||||||| || || ||||| || |||||||||||||||||||| Sbjct: 17576 cttagtcctcaggttgaagaaggcatatgccaagttctttcccacatgtggctcgagtca 17517 Query: 1528 gaaatcatc 1536 || |||||| Sbjct: 17516 gagatcatc 17508 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Minus Query: 1222 catcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtca 1273 ||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||| Sbjct: 18174 catcatcttcctgaaacaaggggactatgtctttctgaagagcaaattgtca 18123 Score = 56.0 bits (28), Expect = 5e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1961 tttcctgttgtctgtgaaataatacatgtaagtctt 1996 |||| |||||||| |||||||||||||||||||||| Sbjct: 17115 tttcttgttgtctttgaaataatacatgtaagtctt 17080 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 447 tgaagatatagctcgtgctattgca 471 ||||||||||| ||||||||||||| Sbjct: 20314 tgaagatatagatcgtgctattgca 20290
>ref|NM_001063520.1| Oryza sativa (japonica cultivar-group) Os06g0182500 (Os06g0182500) mRNA, complete cds Length = 2101 Score = 97.6 bits (49), Expect = 2e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 853 tttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatggcctgatc 912 ||||| ||||| ||||||||||||||| | |||||||| ||||||| |||||||||||| Sbjct: 945 tttcacccaaaatgtgatgtctgcaagcaatttattcctacaaatatgaatggcctgatt 1004 Query: 913 gaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggc 972 ||||| ||||||||||||| ||| | ||||| ||||| || || ||||| | | || Sbjct: 1005 gaatatagagcacatcctttctggttacaaaaatactgtccatcacatgaggtggacggt 1064 Query: 973 actcctaggtgttgcagctgtgaaagaatggagccaa 1009 ||||| || || || || ||||||||||||||||||| Sbjct: 1065 actccaagatgctgtagttgtgaaagaatggagccaa 1101 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 706 attggtcatgggcgttttcttagttgtatggatgaagtttggcatcc 752 ||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct: 798 attggtcatgggcgtttccttagttgcatgggagctgtttggcatcc 844 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1117 caggaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 |||||||||| |||||| | ||||||||||| ||||| |||||||| Sbjct: 1209 caggaattttatgaaggcctaaatatgaaagtggaacaacaagttcc 1255 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1357 tgtgaagtgactgccatcctaatactgtatggtctaccaagattg 1401 |||||||||||||| || || || || |||||||| ||||||||| Sbjct: 1449 tgtgaagtgactgcaattctcattctttatggtctcccaagattg 1493
>dbj|AK105719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-F10, full insert sequence Length = 2421 Score = 97.6 bits (49), Expect = 2e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 853 tttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatggcctgatc 912 ||||| ||||| ||||||||||||||| | |||||||| ||||||| |||||||||||| Sbjct: 1263 tttcacccaaaatgtgatgtctgcaagcaatttattcctacaaatatgaatggcctgatt 1322 Query: 913 gaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggc 972 ||||| ||||||||||||| ||| | ||||| ||||| || || ||||| | | || Sbjct: 1323 gaatatagagcacatcctttctggttacaaaaatactgtccatcacatgaggtggacggt 1382 Query: 973 actcctaggtgttgcagctgtgaaagaatggagccaa 1009 ||||| || || || || ||||||||||||||||||| Sbjct: 1383 actccaagatgctgtagttgtgaaagaatggagccaa 1419 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 706 attggtcatgggcgttttcttagttgtatggatgaagtttggcatcc 752 ||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct: 1116 attggtcatgggcgtttccttagttgcatgggagctgtttggcatcc 1162 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1117 caggaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 |||||||||| |||||| | ||||||||||| ||||| |||||||| Sbjct: 1527 caggaattttatgaaggcctaaatatgaaagtggaacaacaagttcc 1573 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1357 tgtgaagtgactgccatcctaatactgtatggtctaccaagattg 1401 |||||||||||||| || || || || |||||||| ||||||||| Sbjct: 1767 tgtgaagtgactgcaattctcattctttatggtctcccaagattg 1811
>dbj|AK069056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G21, full insert sequence Length = 2103 Score = 97.6 bits (49), Expect = 2e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 853 tttcatccaaagtgtgatgtctgcaagaactttattccgacaaataagaatggcctgatc 912 ||||| ||||| ||||||||||||||| | |||||||| ||||||| |||||||||||| Sbjct: 947 tttcacccaaaatgtgatgtctgcaagcaatttattcctacaaatatgaatggcctgatt 1006 Query: 913 gaataccgagcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggc 972 ||||| ||||||||||||| ||| | ||||| ||||| || || ||||| | | || Sbjct: 1007 gaatatagagcacatcctttctggttacaaaaatactgtccatcacatgaggtggacggt 1066 Query: 973 actcctaggtgttgcagctgtgaaagaatggagccaa 1009 ||||| || || || || ||||||||||||||||||| Sbjct: 1067 actccaagatgctgtagttgtgaaagaatggagccaa 1103 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 706 attggtcatgggcgttttcttagttgtatggatgaagtttggcatcc 752 ||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct: 800 attggtcatgggcgtttccttagttgcatgggagctgtttggcatcc 846 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1117 caggaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 |||||||||| |||||| | ||||||||||| ||||| |||||||| Sbjct: 1211 caggaattttatgaaggcctaaatatgaaagtggaacaacaagttcc 1257 Score = 42.1 bits (21), Expect = 8.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1357 tgtgaagtgactgccatcctaatactgtatggtctaccaagattg 1401 |||||||||||||| || || || || |||||||| ||||||||| Sbjct: 1451 tgtgaagtgactgcaattctcattctttatggtctcccaagattg 1495
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1283 taagaagaccaacaattggaccaggaaacagaattatggatatgattacaggaccataca 1342 ||||||||||| ||||||||||||||||| ||| | || ||||||||||||||||||| Sbjct: 116365 taagaagaccagtaattggaccaggaaacaagattgtagacatgattacaggaccataca 116424 Query: 1343 agctggtccgacggtgtgaagtgactgc 1370 | ||||| |||| |||||||||||||| Sbjct: 116425 aactggttagacgctgtgaagtgactgc 116452 Score = 75.8 bits (38), Expect = 6e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 1027 acattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatggactct 1086 |||||||||||||| ||||||| || |||||||| || | | || ||| ||||||| | Sbjct: 115937 acattagatgatggccggaaactctgtttggaatgcctgaatacttcaataatggacaca 115996 Query: 1087 cccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaatatgaaa 1146 ||||||||||| || || || |||||||| ||||| | ||| |||||||| |||||| Sbjct: 115997 gacgaatgccaaccactatatattgatattcaagaattctatgagggtttgaacatgaaa 116056 Query: 1147 gtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcgttggaa 1206 || ||||| ||| |||| || || ||||||||||| || ||| | |||||||| |||| Sbjct: 116057 gtggaacaacaaattcccttgctgttggttgagcgacaagctttaaatgaagccatggag 116116 Query: 1207 gctgagaaaa 1216 || ||||||| Sbjct: 116117 gccgagaaaa 116126 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 1689 atatggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtac 1748 |||||| ||||||||||| | |||||| |||| ||||||| ||||||||||||| || Sbjct: 117088 atatggagatggttttcgagatggcattaaggccgttgaacgctatggcttgagaaaaac 117147 Query: 1749 ccttgatcatatgaagctaacaggg 1773 ||||||||||||||||| |||||| Sbjct: 117148 tcttgatcatatgaagcttacaggg 117172 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1219 ggacatcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtc 1272 |||||||||||| |||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 116209 ggacatcaccttgctgaaaccagaggtctctgcctatctgaagagcaaattgtc 116262 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 834 atcctgctataaagacttttttcatccaaagtgtgatgtctgcaagaacttt 885 |||||||||||| || |||| |||||||| ||||||||||||||||||||| Sbjct: 115342 atcctgctataaggagcttttccatccaaaatgtgatgtctgcaagaacttt 115393 Score = 60.0 bits (30), Expect = 3e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 684 ttgtgctggatgcagaaagccaattggtcatgggcgttttcttagttgtatggatgaagt 743 |||||||||||| | || ||||| ||||| || || ||||||||||| |||||| || Sbjct: 115114 ttgtgctggatgtaaaactccaatcggtcaaggacggtttcttagttgcatggattctgt 115173 Query: 744 ttggcatcctcagtgcttcaaatgttatgcttgcaataagcccatatcagagtatgag 801 |||||| || |||||||||| |||| |||||| ||| ||| |||||||| |||||| Sbjct: 115174 ttggcacccccagtgcttcaggtgttttgcttgtgataggccaatatcagaatatgag 115231 Score = 50.1 bits (25), Expect = 0.033 Identities = 67/81 (82%) Strand = Plus / Plus Query: 925 catcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtgt 984 |||||||| |||||||| ||||| || ||| |||||||| | | | ||||||||||| Sbjct: 115525 catcctttctggatgcagaagtattgtcctgcccatgaaactgatcgtactcctaggtgc 115584 Query: 985 tgcagctgtgaaagaatggag 1005 ||||| |||||| |||||||| Sbjct: 115585 tgcagttgtgaacgaatggag 115605 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1404 aactggctccattcttgctcacgagatgatgca 1436 ||||||||||||||| ||||| ||||||||||| Sbjct: 116670 aactggctccattctggctcatgagatgatgca 116702 Score = 46.1 bits (23), Expect = 0.52 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1478 aggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtctgaaat 1532 |||| |||||||| |||||||| || ||| | || |||||||||||||| ||||| Sbjct: 116874 aggtcgaagaaggcatctgtcaggttctagctcatatgtggctcgagtcagaaat 116928 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 447 tgaagatatagctcgtgctattgcattatc 476 |||||| |||| |||||||||||||||||| Sbjct: 113166 tgaagacatagatcgtgctattgcattatc 113195
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1283 taagaagaccaacaattggaccaggaaacagaattatggatatgattacaggaccataca 1342 ||||||||||| ||||||||||||||||| ||| | || ||||||||||||||||||| Sbjct: 23661310 taagaagaccagtaattggaccaggaaacaagattgtagacatgattacaggaccataca 23661369 Query: 1343 agctggtccgacggtgtgaagtgactgc 1370 | ||||| |||| |||||||||||||| Sbjct: 23661370 aactggttagacgctgtgaagtgactgc 23661397 Score = 75.8 bits (38), Expect = 6e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 1027 acattagatgatgggaggaaactgtgcttggaatgtctcacttctgcaacaatggactct 1086 |||||||||||||| ||||||| || |||||||| || | | || ||| ||||||| | Sbjct: 23660882 acattagatgatggccggaaactctgtttggaatgcctgaatacttcaataatggacaca 23660941 Query: 1087 cccgaatgccaacacctttacatggatattcaggaattttttgaaggtttgaatatgaaa 1146 ||||||||||| || || || |||||||| ||||| | ||| |||||||| |||||| Sbjct: 23660942 gacgaatgccaaccactatatattgatattcaagaattctatgagggtttgaacatgaaa 23661001 Query: 1147 gtagaacagcaagttccattacttttggttgagcgtcaggctctgaatgaagcgttggaa 1206 || ||||| ||| |||| || || ||||||||||| || ||| | |||||||| |||| Sbjct: 23661002 gtggaacaacaaattcccttgctgttggttgagcgacaagctttaaatgaagccatggag 23661061 Query: 1207 gctgagaaaa 1216 || ||||||| Sbjct: 23661062 gccgagaaaa 23661071 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 1689 atatggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtac 1748 |||||| ||||||||||| | |||||| |||| ||||||| ||||||||||||| || Sbjct: 23662033 atatggagatggttttcgagatggcattaaggccgttgaacgctatggcttgagaaaaac 23662092 Query: 1749 ccttgatcatatgaagctaacaggg 1773 ||||||||||||||||| |||||| Sbjct: 23662093 tcttgatcatatgaagcttacaggg 23662117 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1219 ggacatcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtc 1272 |||||||||||| |||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 23661154 ggacatcaccttgctgaaaccagaggtctctgcctatctgaagagcaaattgtc 23661207 Score = 63.9 bits (32), Expect = 2e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 834 atcctgctataaagacttttttcatccaaagtgtgatgtctgcaagaacttt 885 |||||||||||| || |||| |||||||| ||||||||||||||||||||| Sbjct: 23660287 atcctgctataaggagcttttccatccaaaatgtgatgtctgcaagaacttt 23660338 Score = 60.0 bits (30), Expect = 3e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 684 ttgtgctggatgcagaaagccaattggtcatgggcgttttcttagttgtatggatgaagt 743 |||||||||||| | || ||||| ||||| || || ||||||||||| |||||| || Sbjct: 23660059 ttgtgctggatgtaaaactccaatcggtcaaggacggtttcttagttgcatggattctgt 23660118 Query: 744 ttggcatcctcagtgcttcaaatgttatgcttgcaataagcccatatcagagtatgag 801 |||||| || |||||||||| |||| |||||| ||| ||| |||||||| |||||| Sbjct: 23660119 ttggcacccccagtgcttcaggtgttttgcttgtgataggccaatatcagaatatgag 23660176 Score = 50.1 bits (25), Expect = 0.033 Identities = 67/81 (82%) Strand = Plus / Plus Query: 925 catcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtgt 984 |||||||| |||||||| ||||| || ||| |||||||| | | | ||||||||||| Sbjct: 23660470 catcctttctggatgcagaagtattgtcctgcccatgaaactgatcgtactcctaggtgc 23660529 Query: 985 tgcagctgtgaaagaatggag 1005 ||||| |||||| |||||||| Sbjct: 23660530 tgcagttgtgaacgaatggag 23660550 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1404 aactggctccattcttgctcacgagatgatgca 1436 ||||||||||||||| ||||| ||||||||||| Sbjct: 23661615 aactggctccattctggctcatgagatgatgca 23661647 Score = 46.1 bits (23), Expect = 0.52 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1478 aggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtctgaaat 1532 |||| |||||||| |||||||| || ||| | || |||||||||||||| ||||| Sbjct: 23661819 aggtcgaagaaggcatctgtcaggttctagctcatatgtggctcgagtcagaaat 23661873 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 447 tgaagatatagctcgtgctattgcattatc 476 |||||| |||| |||||||||||||||||| Sbjct: 23658111 tgaagacatagatcgtgctattgcattatc 23658140 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 755 agtgcttcaaatgttatgctt 775 ||||||||||||||||||||| Sbjct: 29919693 agtgcttcaaatgttatgctt 29919673
>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete sequence Length = 120116 Score = 87.7 bits (44), Expect = 2e-13 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1283 taagaagaccaacaattggaccaggaaacagaattatggatatgattacaggaccataca 1342 ||||||||||| ||||||||||||||||| ||| | || ||||||||||||||||||| Sbjct: 336 taagaagaccagtaattggaccaggaaacaagattgtagacatgattacaggaccataca 395 Query: 1343 agctggtccgacggtgtgaagtgactgc 1370 | ||||| |||| |||||||||||||| Sbjct: 396 aactggttagacgctgtgaagtgactgc 423 Score = 73.8 bits (37), Expect = 2e-09 Identities = 73/85 (85%) Strand = Plus / Plus Query: 1689 atatggggatggttttcgggcaggcattcaggcggttgaacaatatggcttgagaagtac 1748 |||||| ||||||||||| | |||||| |||| ||||||| ||||||||||||| || Sbjct: 1059 atatggagatggttttcgagatggcattaaggccgttgaacgctatggcttgagaaaaac 1118 Query: 1749 ccttgatcatatgaagctaacaggg 1773 ||||||||||||||||| |||||| Sbjct: 1119 tcttgatcatatgaagcttacaggg 1143 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1219 ggacatcaccttcctgaaaccaggggtctatgcctttctgaagaacaaattgtc 1272 |||||||||||| |||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 180 ggacatcaccttgctgaaaccagaggtctctgcctatctgaagagcaaattgtc 233 Score = 50.1 bits (25), Expect = 0.033 Identities = 70/85 (82%) Strand = Plus / Plus Query: 1132 ggtttgaatatgaaagtagaacagcaagttccattacttttggttgagcgtcaggctctg 1191 |||||||| |||||||| ||||| ||| |||| || || ||||||||||| || ||| | Sbjct: 13 ggtttgaacatgaaagtggaacaacaaattcccttgctgttggttgagcgacaagcttta 72 Query: 1192 aatgaagcgttggaagctgagaaaa 1216 |||||||| |||| || ||||||| Sbjct: 73 aatgaagccatggaggccgagaaaa 97 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1404 aactggctccattcttgctcacgagatgatgca 1436 ||||||||||||||| ||||| ||||||||||| Sbjct: 641 aactggctccattctggctcatgagatgatgca 673 Score = 46.1 bits (23), Expect = 0.52 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1478 aggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtctgaaat 1532 |||| |||||||| |||||||| || ||| | || |||||||||||||| ||||| Sbjct: 845 aggtcgaagaaggcatctgtcaggttctagctcatatgtggctcgagtcagaaat 899
>gb|BT018760.1| Zea mays clone EL01N0524A08.d mRNA sequence Length = 2110 Score = 79.8 bits (40), Expect = 4e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 870 tgtctgcaagaactttattccgacaaataagaatggcctgatcgaataccgagcacatcc 929 |||||||||| | || ||||| ||||||| ||||||||| || ||||| | |||||||| Sbjct: 915 tgtctgcaagcagttcattcctacaaatatgaatggccttattgaatatagggcacatcc 974 Query: 930 tttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtgttgcag 989 ||| ||| | ||||| ||||| ||||| |||||| | ||| ||||| ||||| || || Sbjct: 975 tttctgggtacaaaaatactgtccttcacatgaaatggatggtactccgaggtgctgtag 1034 Query: 990 ctgtgaaagaatggagccaa 1009 ||||||||||||||||||| Sbjct: 1035 ttgtgaaagaatggagccaa 1054 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 1114 attcaggaattttttgaaggtttgaatatgaaagtagaacagcaagttccattacttttg 1173 ||||||||||||| ||||| ||||||||||||| |||||||| ||||| | ||| || Sbjct: 1159 attcaggaattttacgaaggactgaatatgaaagtggaacagcaggttcctctgcttctg 1218 Query: 1174 gttgagcgtcaggctctgaatgaagc 1199 || ||||| || ||| |||||||||| Sbjct: 1219 gtcgagcgacaagctttgaatgaagc 1244 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 528 tttggaggaagatgagcaacttgcacgagctctccagga 566 ||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 516 tttggaggaggatgagcaacttgcaagagctatccagga 554 Score = 54.0 bits (27), Expect = 0.002 Identities = 87/107 (81%) Strand = Plus / Plus Query: 1357 tgtgaagtgactgccatcctaatactgtatggtctaccaagattgcaaactggctccatt 1416 |||||||||||||| || || || ||||||||||| ||||||||| || || || ||| Sbjct: 1399 tgtgaagtgactgcaattcttattctgtatggtctcccaagattgttgacaggttcaatt 1458 Query: 1417 cttgctcacgagatgatgcacgcatatcttcgccttaaaggataccg 1463 | ||||| ||||||||||| |||| | || |||||||||||||| Sbjct: 1459 ttagctcatgagatgatgcatgcatggttgcggcttaaaggataccg 1505
>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence Length = 119208 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1120 gaattttttgaaggtttgaatatgaaagtagaacagcaagttccattacttttggttgag 1179 ||||||| |||||||||| |||||||| |||| |||||| |||| | |||||||||||| Sbjct: 50968 gaattttatgaaggtttgcatatgaaaatagagcagcaaattcctatgcttttggttgag 51027 Query: 1180 cgtcaggctctgaatgaagcgttgga 1205 | || || |||||||||||| |||| Sbjct: 51028 agacaagcactgaatgaagcgatgga 51053
>gb|AY114659.1| Arabidopsis thaliana unknown protein (At4g36860) mRNA, complete cds Length = 1700 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 |||||||| ||||||||||||||||| || ||||| ||||| | ||| |||||| || Sbjct: 805 gcacatcccttttggatgcaaaagtattgtccttcacatgagcgtgatggaactcctcgg 864 Query: 982 tgttgcagctgtgaaagaatggagccaa 1009 |||||||| ||||| |||||||||||| Sbjct: 865 tgttgcagttgtgagcgaatggagccaa 892
>gb|AY062599.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2022 Score = 63.9 bits (32), Expect = 2e-06 Identities = 74/88 (84%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 |||||||| ||||||||||||||||| || ||||| ||||| | ||| |||||| || Sbjct: 1023 gcacatcccttttggatgcaaaagtattgtccttcacatgagcgtgatggaactcctcgg 1082 Query: 982 tgttgcagctgtgaaagaatggagccaa 1009 |||||||| ||||| |||||||||||| Sbjct: 1083 tgttgcagttgtgagcgaatggagccaa 1110
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 886 attccgacaaataagaatggcctgatcgaataccgagcacatcctttttggatgcaaaag 945 ||||| ||||||| |||||||||||| ||||| ||||||||||||| ||| | ||||| Sbjct: 4108946 attcctacaaatatgaatggcctgattgaatatagagcacatcctttctggttacaaaaa 4109005 Query: 946 tactg 950 ||||| Sbjct: 4109006 tactg 4109010 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 706 attggtcatgggcgttttcttagttgtatggatgaagtttggcatcc 752 ||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct: 4108282 attggtcatgggcgtttccttagttgcatgggagctgtttggcatcc 4108328 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1117 caggaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 |||||||||| |||||| | ||||||||||| ||||| |||||||| Sbjct: 4109292 caggaattttatgaaggcctaaatatgaaagtggaacaacaagttcc 4109338
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 886 attccgacaaataagaatggcctgatcgaataccgagcacatcctttttggatgcaaaag 945 ||||| ||||||| |||||||||||| ||||| ||||||||||||| ||| | ||||| Sbjct: 42205 attcctacaaatatgaatggcctgattgaatatagagcacatcctttctggttacaaaaa 42264 Query: 946 tactg 950 ||||| Sbjct: 42265 tactg 42269 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 706 attggtcatgggcgttttcttagttgtatggatgaagtttggcatcc 752 ||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct: 41541 attggtcatgggcgtttccttagttgcatgggagctgtttggcatcc 41587 Score = 46.1 bits (23), Expect = 0.52 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1117 caggaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 |||||||||| |||||| | ||||||||||| ||||| |||||||| Sbjct: 42551 caggaattttatgaaggcctaaatatgaaagtggaacaacaagttcc 42597
>ref|NM_119850.2| Arabidopsis thaliana zinc ion binding (AT4G36860) mRNA, complete cds Length = 2019 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 |||||||| ||||||||||||||||| || ||||| ||||| | ||| |||||| | Sbjct: 1022 gcacatcccttttggatgcaaaagtattgtccttcacatgagcgtgatggaactcctcgt 1081 Query: 982 tgttgcagctgtgaaagaatggagccaa 1009 |||||||| ||||| |||||||||||| Sbjct: 1082 tgttgcagttgtgagcgaatggagccaa 1109
>ref|NM_202968.1| Arabidopsis thaliana zinc ion binding (AT4G36860) mRNA, complete cds Length = 2057 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 |||||||| ||||||||||||||||| || ||||| ||||| | ||| |||||| | Sbjct: 996 gcacatcccttttggatgcaaaagtattgtccttcacatgagcgtgatggaactcctcgt 1055 Query: 982 tgttgcagctgtgaaagaatggagccaa 1009 |||||||| ||||| |||||||||||| Sbjct: 1056 tgttgcagttgtgagcgaatggagccaa 1083
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1120 gaattttttgaaggtttgaatatgaaagtagaacagcaagttcc 1163 ||||||| ||||||||| ||||||||||| || ||||||||||| Sbjct: 99660 gaattttatgaaggtttaaatatgaaagtggagcagcaagttcc 99617
>dbj|AK227143.1| Arabidopsis thaliana mRNA for hypothetical protein, clone: RAFL09-83-K10 Length = 2075 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 ||||||||||||||| | || ||||| || ||||| || ||| ||| || || || || Sbjct: 1083 gcacatcctttttgggttcagaagtattgtccttctcacgaacacgatgctaccccgaga 1142 Query: 982 tgttgcagctgtgaaagaatggagcca 1008 |||||||| |||||||||||||||||| Sbjct: 1143 tgttgcagttgtgaaagaatggagcca 1169
>ref|NM_101785.3| Arabidopsis thaliana zinc ion binding (AT1G19270) mRNA, complete cds Length = 2346 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 ||||||||||||||| | || ||||| || ||||| || ||| ||| || || || || Sbjct: 1315 gcacatcctttttgggttcagaagtattgtccttctcacgaacacgatgctaccccgaga 1374 Query: 982 tgttgcagctgtgaaagaatggagcca 1008 |||||||| |||||||||||||||||| Sbjct: 1375 tgttgcagttgtgaaagaatggagcca 1401
>emb|BX816571.1|CNS0ADXC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2295 Score = 54.0 bits (27), Expect = 0.002 Identities = 72/87 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 ||||||||||||||| | || ||||| || ||||| || ||| ||| || || || || Sbjct: 1315 gcacatcctttttgggttcagaagtattgtccttctcacgaacacgatgctaccccgaga 1374 Query: 982 tgttgcagctgtgaaagaatggagcca 1008 |||||||| |||||||||||||||||| Sbjct: 1375 tgttgcagttgtgaaagaatggagcca 1401
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatga 962 |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 9538 gcacatcccttttggatgcaaaagtattgtccttcacatga 9578
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 50.1 bits (25), Expect = 0.033 Identities = 37/41 (90%) Strand = Plus / Minus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatga 962 |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 47440 gcacatcccttttggatgcaaaagtattgtccttcacatga 47400
>gb|AC189306.1| Brassica rapa subsp. pekinensis clone KBrB032C14, complete sequence Length = 104954 Score = 48.1 bits (24), Expect = 0.13 Identities = 54/64 (84%) Strand = Plus / Minus Query: 1467 ccttagccctcaggttgaagaaggtatctgtcaagtcctatcccacatgtggctcgagtc 1526 ||||| |||| |||| || ||||||||||| |||||||| || |||||||||| || || Sbjct: 62274 ccttaaccctgaggtagaggaaggtatctgccaagtcctctcttacatgtggcttgaatc 62215 Query: 1527 tgaa 1530 |||| Sbjct: 62214 tgaa 62211
>dbj|AK229177.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL16-46-M02 Length = 1703 Score = 48.1 bits (24), Expect = 0.13 Identities = 63/76 (82%) Strand = Plus / Plus Query: 924 acatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtg 983 |||||| || |||| | ||||||||||||||| ||||||| | ||| ||||| | ||| Sbjct: 724 acatcccttctggaaggaaaagtactgcccttttcatgaagttgatggaactcccaagtg 783 Query: 984 ttgcagctgtgaaaga 999 |||||| ||||||||| Sbjct: 784 ttgcagttgtgaaaga 799
>ref|NM_126059.2| Arabidopsis thaliana zinc ion binding (AT5G66610) mRNA, complete cds Length = 1690 Score = 48.1 bits (24), Expect = 0.13 Identities = 63/76 (82%) Strand = Plus / Plus Query: 924 acatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtg 983 |||||| || |||| | ||||||||||||||| ||||||| | ||| ||||| | ||| Sbjct: 726 acatcccttctggaaggaaaagtactgcccttttcatgaagttgatggaactcccaagtg 785 Query: 984 ttgcagctgtgaaaga 999 |||||| ||||||||| Sbjct: 786 ttgcagttgtgaaaga 801
>gb|AC069143.3|T29M8 Sequence of BAC T29M8 from Arabidopsis thaliana chromosome 1, complete sequence Length = 58738 Score = 48.1 bits (24), Expect = 0.13 Identities = 69/84 (82%) Strand = Plus / Plus Query: 922 gcacatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctagg 981 ||||||||||||||| | || ||||| || ||||| || ||| ||| || || || || Sbjct: 54053 gcacatcctttttgggttcagaagtattgtccttctcacgaacacgatgctaccccgaga 54112 Query: 982 tgttgcagctgtgaaagaatggag 1005 |||||||| ||||||||||||||| Sbjct: 54113 tgttgcagttgtgaaagaatggag 54136
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 48.1 bits (24), Expect = 0.13 Identities = 63/76 (82%) Strand = Plus / Plus Query: 924 acatcctttttggatgcaaaagtactgcccttcccatgaagacggtggcactcctaggtg 983 |||||| || |||| | ||||||||||||||| ||||||| | ||| ||||| | ||| Sbjct: 75359 acatcccttctggaaggaaaagtactgcccttttcatgaagttgatggaactcccaagtg 75418 Query: 984 ttgcagctgtgaaaga 999 |||||| ||||||||| Sbjct: 75419 ttgcagttgtgaaaga 75434
>gb|DQ336955.1| Glycine max cultivar Williams 82 clone BAC gmw1-52d3, complete sequence Length = 98675 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 gttggttaaacaaaatatttaa 347 |||||||||||||||||||||| Sbjct: 65684 gttggttaaacaaaatatttaa 65705
>dbj|AK227313.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-01-I04 Length = 389 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1565 cctcagcatcatcatcgtcttcgtcg 1590 ||||| |||||||||||||||||||| Sbjct: 99 cctcatcatcatcatcgtcttcgtcg 74
>gb|DQ774943.1| Synthetic construct Vibrio cholerae clone FLH198198.01F flaA gene, complete sequence Length = 1140 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1177 gagcgtcaggctctgaatgaag 1198 |||||||||||||||||||||| Sbjct: 322 gagcgtcaggctctgaatgaag 343
>gb|AC153161.23| Glycine max clone gmw1-77p13, complete sequence Length = 174762 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 ttatagtttggaggaagatgag 543 |||||||||||||||||||||| Sbjct: 133529 ttatagtttggaggaagatgag 133508
>emb|CT737354.2| Human DNA sequence from clone XX-HCC1954_39C20, complete sequence Length = 148559 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1126 tttgaaggtttgaatatgaaag 1147 |||||||||||||||||||||| Sbjct: 72135 tttgaaggtttgaatatgaaag 72156
>gb|AC152933.2| Xenopus tropicalis clone ISB1-42B12, complete sequence Length = 44689 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1995 ttaaagatatagaggtactatagttg 2020 |||||||||||||||||| ||||||| Sbjct: 38068 ttaaagatatagaggtacaatagttg 38043
>ref|NM_180344.1| Arabidopsis thaliana unknown protein (AT3G50550) mRNA, complete cds Length = 379 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1565 cctcagcatcatcatcgtcttcgtcg 1590 ||||| |||||||||||||||||||| Sbjct: 99 cctcatcatcatcatcgtcttcgtcg 74
>gb|AE004290.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 198 of 251 of the complete chromosome Length = 10581 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1177 gagcgtcaggctctgaatgaag 1198 |||||||||||||||||||||| Sbjct: 6653 gagcgtcaggctctgaatgaag 6632
>ref|NM_067093.2| Caenorhabditis elegans Y66D12A.8 (Y66D12A.8) mRNA, complete cds Length = 805 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1571 catcatcatcgtcttcgtcggc 1592 |||||||||||||||||||||| Sbjct: 656 catcatcatcgtcttcgtcggc 677
>gb|AC074255.6| Homo sapiens BAC clone RP11-796L2 from 4, complete sequence Length = 135926 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2075 tgagtacaacatttggataaattgtg 2100 ||||| |||||||||||||||||||| Sbjct: 132236 tgagtccaacatttggataaattgtg 132211
>emb|AL354716.9| Human DNA sequence from clone RP11-86F4 on chromosome 6 Contains the 3' end of the KPNA5 gene for karyopherin alpha 5 (importin alpha 6), two novel genes and a CpG island, complete sequence Length = 90432 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 743 tttggcatcctcagtgcttcaaatgttatg 772 |||||||||||||||||| |||||||||| Sbjct: 27902 tttggcatcctcagtgctgaaaatgttatg 27873
>gb|AC012610.6| Homo sapiens chromosome 5 clone CTC-540O12, complete sequence Length = 135248 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1126 tttgaaggtttgaatatgaaag 1147 |||||||||||||||||||||| Sbjct: 111131 tttgaaggtttgaatatgaaag 111152
>gb|AC008782.6|AC008782 Homo sapiens chromosome 5 clone CTD-2026D23, complete sequence Length = 167275 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1126 tttgaaggtttgaatatgaaag 1147 |||||||||||||||||||||| Sbjct: 132097 tttgaaggtttgaatatgaaag 132076
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1921 aagagaaagaaagattattcat 1942 |||||||||||||||||||||| Sbjct: 127871 aagagaaagaaagattattcat 127850
>gb|AC010395.6|AC010395 Homo sapiens chromosome 5 clone CTD-2089O24, complete sequence Length = 130615 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1126 tttgaaggtttgaatatgaaag 1147 |||||||||||||||||||||| Sbjct: 106495 tttgaaggtttgaatatgaaag 106516
>emb|AL161712.5|CEY66D12A Caenorhabditis elegans YAC Y66D12A, complete sequence Length = 123149 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1571 catcatcatcgtcttcgtcggc 1592 |||||||||||||||||||||| Sbjct: 91137 catcatcatcgtcttcgtcggc 91158
>gb|AF019213.1| Vibrio cholerae FlgI (flgI) gene, partial cds; and flagellar protein (flgJ), hook associated protein (flgM), hook associated protein (flgL), and flagellin core protein A (flaA) genes, complete cds Length = 7256 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1177 gagcgtcaggctctgaatgaag 1198 |||||||||||||||||||||| Sbjct: 6284 gagcgtcaggctctgaatgaag 6305
>gb|AF007121.1|AF007121 Vibrio cholerae hook-associated protein (flgL) gene, partial cds, and flagellin (flaA), flagellin (flaC) and transposase (tnpA) genes, complete cds Length = 4400 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1177 gagcgtcaggctctgaatgaag 1198 |||||||||||||||||||||| Sbjct: 1182 gagcgtcaggctctgaatgaag 1203
>gb|AY785224.1| Brachionus rotundiformis isolate adriatic2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 630 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 244 agaaagaaagattattcatac 224
>gb|AY785223.1| Brachionus rotundiformis isolate adriatic1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 630 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 244 agaaagaaagattattcatac 224
>gb|AY785222.1| Brachionus rotundiformis isolate pozasurss cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 630 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 244 agaaagaaagattattcatac 224
>gb|AY785221.1| Brachionus rotundiformis isolate pozasur6 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 630 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 244 agaaagaaagattattcatac 224
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 755 agtgcttcaaatgttatgctt 775 ||||||||||||||||||||| Sbjct: 21190 agtgcttcaaatgttatgctt 21210
>gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete sequence Length = 103543 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 tcgagccggccccttcttctt 106 ||||||||||||||||||||| Sbjct: 62141 tcgagccggccccttcttctt 62121
>gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome 12, complete sequence Length = 187364 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1902 tttacagtaaagtaataagaa 1922 ||||||||||||||||||||| Sbjct: 165697 tttacagtaaagtaataagaa 165677
>ref|NM_001076524.1| Bos taurus WD repeat domain 48 (WDR48), mRNA gb|BC108126.1| Bos taurus WD repeat domain 48, mRNA (cDNA clone MGC:128648 IMAGE:7986830), complete cds Length = 4072 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1602 cacttcgaagaagggagcaaagaca 1626 ||||||||||||| ||||||||||| Sbjct: 3517 cacttcgaagaagtgagcaaagaca 3541
>ref|NM_070322.1| Caenorhabditis elegans K01G12.3 (K01G12.3) mRNA, complete cds Length = 1791 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1654 atcaagaatcagatcgaaaca 1674 ||||||||||||||||||||| Sbjct: 1085 atcaagaatcagatcgaaaca 1105
>gb|AC116049.3| Homo sapiens BAC clone RP11-396M11 from 4, complete sequence Length = 84979 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1914 taataagaagagaaagaaaga 1934 ||||||||||||||||||||| Sbjct: 21268 taataagaagagaaagaaaga 21288
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1610 agaagggagcaaagacagaatttga 1634 |||||| |||||||||||||||||| Sbjct: 85870 agaaggtagcaaagacagaatttga 85894
>gb|AC107878.2| Homo sapiens chromosome 18, clone RP11-138C8, complete sequence Length = 182375 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1990 aagtcttaaagatatagaggtactatagt 2018 ||||||||||||| | ||||||||||||| Sbjct: 158128 aagtcttaaagattttgaggtactatagt 158100
>gb|AC093699.5| Homo sapiens BAC clone RP11-810C20 from 4, complete sequence Length = 136898 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 808 atgcatgaagaccagccataccaca 832 |||||| |||||||||||||||||| Sbjct: 30431 atgcataaagaccagccataccaca 30407
>emb|AL353813.12| Human DNA sequence from clone RP11-79D8 on chromosome 9 Contains the TLE4 gene for transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (ESG4) and a novel pseudogene (BCE-1), complete sequence Length = 192966 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1920 gaagagaaagaaagattattc 1940 ||||||||||||||||||||| Sbjct: 75211 gaagagaaagaaagattattc 75191
>gb|AF387293.1| Brachionus rotundiformis isolate 6HOSSS cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387292.1| Brachionus rotundiformis isolate 6CAD5S cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387291.1| Brachionus rotundiformis isolate 6CAD3S cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387290.1| Brachionus rotundiformis isolate 6POL2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387289.1| Brachionus rotundiformis isolate 6POL1 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387288.1| Brachionus rotundiformis isolate Tunisia10 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>gb|AF387287.1| Brachionus rotundiformis isolate 6TOSSS2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 603 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1924 agaaagaaagattattcatac 1944 ||||||||||||||||||||| Sbjct: 232 agaaagaaagattattcatac 212
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1910 aaagtaataagaagagaaagaaaga 1934 ||||||||||||||| ||||||||| Sbjct: 56931 aaagtaataagaagaaaaagaaaga 56907
>emb|BX901954.6| Zebrafish DNA sequence from clone DKEY-146M20 in linkage group 4 Contains nine novel genes and six CpG islands, complete sequence Length = 150913 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1811 aacattactctgatttgtgaagatg 1835 ||||||||||||||||||| ||||| Sbjct: 82032 aacattactctgatttgtggagatg 82056
>emb|AJ331238.1|HSA331238 Homo sapiens genomic sequence surrounding NotI site, clone NL6-CG14RS Length = 864 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1914 taataagaagagaaagaaaga 1934 ||||||||||||||||||||| Sbjct: 806 taataagaagagaaagaaaga 786
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence Length = 111951 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1237 accaggggtctatgcctttct 1257 ||||||||||||||||||||| Sbjct: 56775 accaggggtctatgcctttct 56795
>ref|XM_673799.1| Plasmodium berghei strain ANKA hypothetical protein (PB000588.02.0) partial mRNA Length = 630 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1915 aataagaagagaaagaaagat 1935 ||||||||||||||||||||| Sbjct: 529 aataagaagagaaagaaagat 549
>emb|BX005265.6| Zebrafish DNA sequence from clone CH211-254O16 in linkage group 5, complete sequence Length = 162599 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 tggttaaacaaaatatttaaa 348 ||||||||||||||||||||| Sbjct: 91559 tggttaaacaaaatatttaaa 91539
>emb|AL929337.9| Zebrafish DNA sequence from clone CH211-138N21 in linkage group 5, complete sequence Length = 176736 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tggttaaacaaaatatttaaa 348 ||||||||||||||||||||| Sbjct: 57031 tggttaaacaaaatatttaaa 57051
>ref|XM_731212.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105862.00.0) partial mRNA Length = 434 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1915 aataagaagagaaagaaagat 1935 ||||||||||||||||||||| Sbjct: 354 aataagaagagaaagaaagat 374
>emb|AL671090.9| Mouse DNA sequence from clone RP23-154A10 on chromosome 4, complete sequence Length = 197665 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1941 atacatagatatttgcaaattttcc 1965 ||||||||||||||||||| ||||| Sbjct: 104623 atacatagatatttgcaaactttcc 104647 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 417,295,228 Number of extensions: 23444517 Number of successful extensions: 142601 Number of sequences better than 10.0: 85 Number of HSP's gapped: 142576 Number of HSP's successfully gapped: 183 Length of query: 2118 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2095 Effective length of database: 18,503,978,556 Effective search space: 38765835074820 Effective search space used: 38765835074820 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
