| Clone Name | FLbaf82g09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832036.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107D22, full insert sequence Length = 943 Score = 474 bits (239), Expect = e-130 Identities = 386/435 (88%) Strand = Plus / Plus Query: 131 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 190 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 202 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 261 Query: 191 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 250 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 262 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 321 Query: 251 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 310 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 322 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 381 Query: 311 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattttga 370 ||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||||| Sbjct: 382 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 441 Query: 371 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 430 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 442 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 501 Query: 431 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 490 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 502 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 561 Query: 491 gctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgt 550 || || || ||||||||||||||||||||||| ||||| || ||||| || || || || Sbjct: 562 acttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggt 621 Query: 551 cctccgtgaccgggc 565 |||||| || ||||| Sbjct: 622 cctccgggagcgggc 636 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 729 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 770
>dbj|AK243453.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100070G09, full insert sequence Length = 1767 Score = 474 bits (239), Expect = e-130 Identities = 386/435 (88%) Strand = Plus / Plus Query: 131 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 190 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 1024 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 1083 Query: 191 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 250 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1084 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 1143 Query: 251 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 310 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 1144 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 1203 Query: 311 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattttga 370 ||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||||| Sbjct: 1204 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 1263 Query: 371 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 430 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 1264 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 1323 Query: 431 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 490 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1324 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 1383 Query: 491 gctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgt 550 || || || ||||||||||||||||||||||| ||||| || ||||| || || || || Sbjct: 1384 acttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggt 1443 Query: 551 cctccgtgaccgggc 565 |||||| || ||||| Sbjct: 1444 cctccgggagcgggc 1458 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 1551 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 1592
>ref|NM_001057984.1| Oryza sativa (japonica cultivar-group) Os03g0780400 (Os03g0780400) mRNA, complete cds Length = 952 Score = 474 bits (239), Expect = e-130 Identities = 386/435 (88%) Strand = Plus / Plus Query: 131 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 190 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 209 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 268 Query: 191 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 250 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 269 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 328 Query: 251 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 310 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 329 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 388 Query: 311 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattttga 370 ||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||||| Sbjct: 389 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 448 Query: 371 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 430 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 449 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 508 Query: 431 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 490 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 509 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 568 Query: 491 gctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgt 550 || || || ||||||||||||||||||||||| ||||| || ||||| || || || || Sbjct: 569 acttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggt 628 Query: 551 cctccgtgaccgggc 565 |||||| || ||||| Sbjct: 629 cctccgggagcgggc 643 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 736 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 777
>dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B06, full insert sequence Length = 954 Score = 474 bits (239), Expect = e-130 Identities = 386/435 (88%) Strand = Plus / Plus Query: 131 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 190 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 210 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 269 Query: 191 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 250 |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 270 catcagggacacattccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 329 Query: 251 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 310 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 330 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 389 Query: 311 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattttga 370 ||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||||| Sbjct: 390 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 449 Query: 371 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 430 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 450 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 509 Query: 431 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 490 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 510 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 569 Query: 491 gctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgt 550 || || || ||||||||||||||||||||||| ||||| || ||||| || || || || Sbjct: 570 acttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggt 629 Query: 551 cctccgtgaccgggc 565 |||||| || ||||| Sbjct: 630 cctccgggagcgggc 644 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 737 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 778
>dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F01, full insert sequence Length = 953 Score = 466 bits (235), Expect = e-128 Identities = 385/435 (88%) Strand = Plus / Plus Query: 131 ccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcctga 190 ||||||||| |||||||| || ||||||||||||||| || ||||| ||||||||||| Sbjct: 212 ccccatggcgttcatgcgttcccactccaatgcatcctccggtatgggggttgctcctga 271 Query: 191 tatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaa 250 |||||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 272 catcagggacacatcccttgagcttcagatgaagaaagcatttcgctatgttatcttcaa 331 Query: 251 gatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagagtta 310 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 332 aatcgaggaaaagcaaaagcaagttgttgtggagaagaccggggcaacaactgagagtta 391 Query: 311 tgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattttga 370 ||||||||||||||| | ||||||||| || |||||||||||||| || ||||||||||| Sbjct: 392 tgatgatttcctggcatctctcccagaaaatgactgcagatatgccctctatgattttga 451 Query: 371 ctttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccctga 430 |||||||||||||||||||||||| || ||||||||||||||||| |||||||| || Sbjct: 452 ctttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcctggtctccatc 511 Query: 431 cacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaaga 490 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 512 aacatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaaga 571 Query: 491 gctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgt 550 || || || ||||||||||||||||||||||| ||||| || ||||| || || || || Sbjct: 572 acttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggt 631 Query: 551 cctccgtgaccgggc 565 |||||| || ||||| Sbjct: 632 cctccgggagcgggc 646 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Plus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 739 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 780
>gb|DQ244623.1| Zea mays clone 9687 mRNA sequence Length = 879 Score = 434 bits (219), Expect = e-118 Identities = 387/443 (87%) Strand = Plus / Plus Query: 128 cgaccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcc 187 |||||| ||||| ||||||||| || ||| |||||||| |||||||||||||||||||| Sbjct: 157 cgacccgatggctttcatgcgctcccgctcaaatgcatcttctggcatgggagttgctcc 216 Query: 188 tgatatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatctt 247 | | || |||||||||||| | |||||||| |||||||||||||| || ||||||||||| Sbjct: 217 taacattagggagacattcgtcgagcttcaaatgaagaaggcattccgatatgttatctt 276 Query: 248 caagatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagag 307 ||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 277 caaaatcgaagagaagcaaaagcaggtggttgtggagaagacaggggctactactgaaag 336 Query: 308 ttatgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattt 367 |||||||| || |||| | |||||||||||| |||||| |||||||||| |||||||| Sbjct: 337 ctatgatgactttttggcctctctcccagagaatgactgccgatatgcgctgtatgattt 396 Query: 368 tgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 427 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 tgattttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 456 Query: 428 tgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagca 487 ||||||||||| || || ||||||||||||||||| || ||||||||||||||| | Sbjct: 457 atcgacatcccgcatacgtgctaagatgctgtactccacgtcgaaggaccgcatcaagta 516 Query: 488 agagctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcga 547 ||||| ||||||||||||||||| |||||||| || ||||| | |||||||| |||| Sbjct: 517 cgagcttgacgggttccactacgaaatccaggcgaccgacccatcggaggtggacatcga 576 Query: 548 cgtcctccgtgaccgggcgcact 570 || ||||| || ||||| |||| Sbjct: 577 ggttctccgggagcgggctcact 599
>gb|AY103931.1| Zea mays PCO140521 mRNA sequence Length = 985 Score = 434 bits (219), Expect = e-118 Identities = 387/443 (87%) Strand = Plus / Plus Query: 128 cgaccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcc 187 |||||| ||||| ||||||||| || ||| |||||||| |||||||||||||||||||| Sbjct: 166 cgacccgatggctttcatgcgctcccgctcaaatgcatcttctggcatgggagttgctcc 225 Query: 188 tgatatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatctt 247 | | || |||||||||||| | |||||||| |||||||||||||| || ||||||||||| Sbjct: 226 taacattagggagacattcgtcgagcttcaaatgaagaaggcattccgatatgttatctt 285 Query: 248 caagatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagag 307 ||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 286 caaaatcgaagagaagcaaaagcaggtggttgtggagaagacaggggctactactgaaag 345 Query: 308 ttatgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattt 367 |||||||| || |||| | |||||||||||| |||||| |||||||||| |||||||| Sbjct: 346 ctatgatgactttttggcctctctcccagagaatgactgccgatatgcgctgtatgattt 405 Query: 368 tgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 427 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tgattttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 465 Query: 428 tgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagca 487 ||||||||||| || || ||||||||||||||||| || ||||||||||||||| | Sbjct: 466 atcgacatcccgcatacgtgctaagatgctgtactccacgtcgaaggaccgcatcaagta 525 Query: 488 agagctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcga 547 ||||| ||||||||||||||||| |||||||| || ||||| | |||||||| |||| Sbjct: 526 cgagcttgacgggttccactacgaaatccaggcgaccgacccatcggaggtggacatcga 585 Query: 548 cgtcctccgtgaccgggcgcact 570 || ||||| || ||||| |||| Sbjct: 586 ggttctccgggagcgggctcact 608
>gb|DQ244624.1| Zea mays clone 9690 mRNA sequence Length = 879 Score = 426 bits (215), Expect = e-116 Identities = 386/443 (87%) Strand = Plus / Plus Query: 128 cgaccccatggccttcatgcgcacctcctccaatgcatcctctggcatgggagttgctcc 187 |||||| ||||| ||||||||| || ||| |||||||| |||||||||||||||||||| Sbjct: 157 cgacccgatggctttcatgcgctcccgctcaaatgcatcttctggcatgggagttgctcc 216 Query: 188 tgatatcagggagacattcctggagcttcagatgaagaaggcatttcgctatgttatctt 247 | | || |||||||||||| | |||||||| |||||||||||||| || ||||||||||| Sbjct: 217 taacattagggagacattcgtcgagcttcaaatgaagaaggcattccgatatgttatctt 276 Query: 248 caagatagaagaaaagcaaaagcaggttgttgtggagaagacaggggctacaactgagag 307 ||| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 277 caaaatcgaagagaagcaaaagcaggtggttgtggagaagacaggggctactactgaaag 336 Query: 308 ttatgatgatttcctggcttgtctcccagagaacgactgcagatatgcgctttatgattt 367 |||||||| || |||| | |||||||||||| |||||| ||||| |||| |||||||| Sbjct: 337 ctatgatgactttttggcctctctcccagagaatgactgccgatattcgctgtatgattt 396 Query: 368 tgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 427 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 tgattttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtcccc 456 Query: 428 tgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagca 487 ||||||||||| || || ||||||||||||||||| || ||||||||||||||| | Sbjct: 457 atcgacatcccgcatacgtgctaagatgctgtactccacgtcgaaggaccgcatcaagta 516 Query: 488 agagctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcga 547 ||||| ||||||||||||||||| |||||||| || ||||| | |||||||| |||| Sbjct: 517 cgagcttgacgggttccactacgaaatccaggcgaccgacccatcggaggtggacatcga 576 Query: 548 cgtcctccgtgaccgggcgcact 570 || ||||| || ||||| |||| Sbjct: 577 ggttctccgggagcgggctcact 599
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 357 bits (180), Expect = 5e-95 Identities = 246/268 (91%) Strand = Plus / Minus Query: 156 tccaatgcatcctctggcatgggagttgctcctgatatcagggagacattcctggagctt 215 |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 59012 tccaatgcatcctccggtatgggggttgctcctgacatcagggacacattccttgagctt 58953 Query: 216 cagatgaagaaggcatttcgctatgttatcttcaagatagaagaaaagcaaaagcaggtt 275 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 58952 cagatgaagaaagcatttcgctatgttatcttcaaaatcgaggaaaagcaaaagcaagtt 58893 Query: 276 gttgtggagaagacaggggctacaactgagagttatgatgatttcctggcttgtctccca 335 |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 58892 gttgtggagaagaccggggcaacaactgagagttatgatgatttcctggcatctctccca 58833 Query: 336 gagaacgactgcagatatgcgctttatgattttgactttgttactggggagaatgtgcag 395 || || |||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 58832 gaaaatgactgcagatatgccctctatgattttgactttgttactggggagaatgtgcaa 58773 Query: 396 aaaagcaagattttcttcattgcctggt 423 || ||||||||||||||||| ||||||| Sbjct: 58772 aagagcaagattttcttcatcgcctggt 58745 Score = 131 bits (66), Expect = 5e-27 Identities = 117/134 (87%) Strand = Plus / Minus Query: 432 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 491 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 58362 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 58303 Query: 492 ctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgtc 551 || || || ||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 58302 cttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggtc 58243 Query: 552 ctccgtgaccgggc 565 ||||| || ||||| Sbjct: 58242 ctccgggagcgggc 58229 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 58136 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 58095
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 357 bits (180), Expect = 5e-95 Identities = 246/268 (91%) Strand = Plus / Minus Query: 156 tccaatgcatcctctggcatgggagttgctcctgatatcagggagacattcctggagctt 215 |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 32148399 tccaatgcatcctccggtatgggggttgctcctgacatcagggacacattccttgagctt 32148340 Query: 216 cagatgaagaaggcatttcgctatgttatcttcaagatagaagaaaagcaaaagcaggtt 275 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 32148339 cagatgaagaaagcatttcgctatgttatcttcaaaatcgaggaaaagcaaaagcaagtt 32148280 Query: 276 gttgtggagaagacaggggctacaactgagagttatgatgatttcctggcttgtctccca 335 |||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 32148279 gttgtggagaagaccggggcaacaactgagagttatgatgatttcctggcatctctccca 32148220 Query: 336 gagaacgactgcagatatgcgctttatgattttgactttgttactggggagaatgtgcag 395 || || |||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 32148219 gaaaatgactgcagatatgccctctatgattttgactttgttactggggagaatgtgcaa 32148160 Query: 396 aaaagcaagattttcttcattgcctggt 423 || ||||||||||||||||| ||||||| Sbjct: 32148159 aagagcaagattttcttcatcgcctggt 32148132 Score = 131 bits (66), Expect = 5e-27 Identities = 117/134 (87%) Strand = Plus / Minus Query: 432 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 491 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 32147749 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32147690 Query: 492 ctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcgacgtc 551 || || || ||||||||||||||||||||||| ||||| || ||||| || || || ||| Sbjct: 32147689 cttgatggattccactacgagatccaggcaaccgacccaactgaggtagaccttgaggtc 32147630 Query: 552 ctccgtgaccgggc 565 ||||| || ||||| Sbjct: 32147629 ctccgggagcgggc 32147616 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/44 (88%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 649 ttgttaataagacagatatatccaggtttcctgcaaaacgtatc 692 |||||||||||| || ||||||| |||||||| |||||||||| Sbjct: 32147523 ttgttaataagaaag--atatccatgtttcctgtaaaacgtatc 32147482
>gb|BT019096.1| Zea mays clone Contig695.F mRNA sequence Length = 438 Score = 182 bits (92), Expect = 2e-42 Identities = 177/204 (86%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 367 ttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtccc 426 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgattttgttactggggaga-tgtgcagaaaagcaagattttcttcattgcctggtccc 59 Query: 427 ctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagc 486 | ||||||||||| || || ||||||||||||||||| || ||||||||||||||| Sbjct: 60 catcgacatcccgcatacgtgctaagatgctgtactccacgtcaaaggaccgcatcaagt 119 Query: 487 aagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggtggagctcg 546 | ||||| ||||||||||||||||| |||||||| || ||||| | |||||||| ||| Sbjct: 120 acgagcttgacgggttccactacgaaatccaggcgaccgacccatcggaggtggacatcg 179 Query: 547 acgtcctccgtgaccgggcgcact 570 | || ||||| || ||||| |||| Sbjct: 180 aggttctccgggagcgggctcact 203
>gb|AY081942.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 2 (ADF2) mRNA, partial cds Length = 523 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 235 cagaaaagcaagattttcttcattgcttggtcacctgacacatc 278
>emb|AM111332.1| Plantago major mRNA for actin-depolymerizing factor (adf2 gene) Length = 732 Score = 67.9 bits (34), Expect = 6e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 ||||||||||||||||||| || | |||||| |||||||||| |||||||||||||| Sbjct: 285 tttatgattttgactttgtgacagcagagaattgccagaaaagcaggattttcttcattg 344 Query: 418 cctggtcccctgacacatcccgcatc 443 | ||||| ||||| ||| | |||||| Sbjct: 345 cttggtctcctgatacagcgcgcatc 370
>gb|DQ245781.1| Zea mays clone 20290 mRNA sequence Length = 683 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 ||||||| || |||||||| |||| ||||||| ||||| ||||||||||||||||||| Sbjct: 268 tttatgacttcgactttgtcactgcggagaattgccagaagagcaagattttcttcattg 327 Query: 418 cctggt 423 | |||| Sbjct: 328 cgtggt 333
>emb|AM293606.1| Platanus x acerifolia mRNA for actin-depolymerizing factor (adf gene), clone A12D Length = 690 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 246 ttcaagatagaagaaaagcaaaagcaggttgttgtgga 283 ||||||||||| || ||||||||||||||||||||||| Sbjct: 232 ttcaagatagaggacaagcaaaagcaggttgttgtgga 269 Score = 50.1 bits (25), Expect = 0.015 Identities = 55/65 (84%) Strand = Plus / Plus Query: 360 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 419 ||||||||||||||||| || | || || || || ||||||| ||||||||||||||| Sbjct: 346 tatgattttgactttgtgacagcagaaaacgtccaaaaaagcaggattttcttcattgct 405 Query: 420 tggtc 424 ||||| Sbjct: 406 tggtc 410
>ref|NM_125382.2| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding (ADF4) mRNA, complete cds Length = 807 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 277 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 336 Query: 418 cctggt 423 | |||| Sbjct: 337 catggt 342
>ref|NM_180897.1| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding (ADF4) mRNA, complete cds Length = 854 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 324 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 383 Query: 418 cctggt 423 | |||| Sbjct: 384 catggt 389
>gb|AY090336.1| Arabidopsis thaliana At1g05180/YUP8H12_21 mRNA, complete cds Length = 399 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 185 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 244 Query: 418 cctggt 423 | |||| Sbjct: 245 catggt 250
>gb|AY050460.1| Arabidopsis thaliana AT5g59890/mmn10_110 mRNA, complete cds Length = 734 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 276 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 335 Query: 418 cctggt 423 | |||| Sbjct: 336 catggt 341
>gb|AY084757.1| Arabidopsis thaliana clone 11691 mRNA, complete sequence Length = 841 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 325 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 384 Query: 418 cctggt 423 | |||| Sbjct: 385 catggt 390
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 36758 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 36817 Query: 418 cctggt 423 | |||| Sbjct: 36818 catggt 36823
>gb|AF102822.1|AF102822 Arabidopsis thaliana actin depolymerizing factor 4 (ADF4) mRNA, complete cds Length = 705 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 302 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 361 Query: 418 cctggt 423 | |||| Sbjct: 362 catggt 367
>gb|AY485790.1| Capsicum annuum actin-depolymerizing factor mRNA, complete cds Length = 762 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacac 433 |||||||||| |||||| |||||||| |||||||||||||| Sbjct: 310 cagaaaagcaggatttttttcattgcatggtcccctgacac 350
>gb|DQ320313.1| Arachis hypogaea actin depolymerizing factor-like protein mRNA, complete cds Length = 650 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 396 aaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 273 aaaagcaggattttcttcattgcttggtctcctgacacatc 313
>gb|BT013009.1| Lycopersicon esculentum clone 114245R, mRNA sequence Length = 793 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 |||||||||| ||| || |||||||| ||||||||||||||||| Sbjct: 311 cagaaaagcaggatctttttcattgcatggtcccctgacacatc 354
>gb|AY347804.1| Malus x domestica clone 17-6 actin-depolymerizing factor mRNA, partial cds Length = 281 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 175 cagaaaagccggatattcttcattgcctggtctcctgacacatc 218
>gb|AY081941.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 1 (ADF1) mRNA, complete cds Length = 529 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtc 424 |||||||||||||||||||||||||| ||||| Sbjct: 251 cagaaaagcaagattttcttcattgcttggtc 282
>gb|AF183903.1|AF183903 Petunia x hybrida actin-depolymerizing factor 1 (ADF1) mRNA, complete cds Length = 693 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 360 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 419 ||||||||||| || ||||||| ||||||| ||||| |||| ||| || |||||||| Sbjct: 274 tatgattttgatttcgttactgcggagaattgccagaagagcaggatatttttcattgca 333 Query: 420 tggtcccctgacaca 434 |||| |||||||||| Sbjct: 334 tggtgccctgacaca 348
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggt 423 |||||||||||||||||||||||||| |||| Sbjct: 37268 cagaaaagcaagattttcttcattgcatggt 37298
>gb|DQ244412.1| Zea mays clone 7246 mRNA sequence Length = 852 Score = 52.0 bits (26), Expect = 0.004 Identities = 68/82 (82%) Strand = Plus / Plus Query: 330 ctcccagagaacgactgcagatatgcgctttatgattttgactttgttactggggagaat 389 ||||| ||||| |||||| |||| ||| | |||||||| ||||||||||||| ||| || Sbjct: 327 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 386 Query: 390 gtgcagaaaagcaagattttct 411 || ||||| |||| ||| |||| Sbjct: 387 gtccagaagagcaggatcttct 408
>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence Length = 881 Score = 52.0 bits (26), Expect = 0.004 Identities = 68/82 (82%) Strand = Plus / Plus Query: 330 ctcccagagaacgactgcagatatgcgctttatgattttgactttgttactggggagaat 389 ||||| ||||| |||||| |||| ||| | |||||||| ||||||||||||| ||| || Sbjct: 348 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 407 Query: 390 gtgcagaaaagcaagattttct 411 || ||||| |||| ||| |||| Sbjct: 408 gtccagaagagcaggatcttct 429
>gb|DQ088156.1| Gossypium hirsutum actin depolymerizing factor (ADF1) mRNA, complete cds Length = 963 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 246 ttcaagatagaagaaaagcaaaagcaggttgttgtgga 283 |||||||| |||||||| |||||||| ||||||||||| Sbjct: 265 ttcaagattgaagaaaaacaaaagcaagttgttgtgga 302
>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor Length = 801 Score = 52.0 bits (26), Expect = 0.004 Identities = 68/82 (82%) Strand = Plus / Plus Query: 330 ctcccagagaacgactgcagatatgcgctttatgattttgactttgttactggggagaat 389 ||||| ||||| |||||| |||| ||| | |||||||| ||||||||||||| ||| || Sbjct: 322 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 381 Query: 390 gtgcagaaaagcaagattttct 411 || ||||| |||| ||| |||| Sbjct: 382 gtccagaagagcaggatcttct 403
>gb|AY103749.1| Zea mays PCO115125 mRNA sequence Length = 965 Score = 52.0 bits (26), Expect = 0.004 Identities = 68/82 (82%) Strand = Plus / Plus Query: 330 ctcccagagaacgactgcagatatgcgctttatgattttgactttgttactggggagaat 389 ||||| ||||| |||||| |||| ||| | |||||||| ||||||||||||| ||| || Sbjct: 371 ctccctgagaatgactgccgatacgcgatctatgatttcgactttgttactgcagaggat 430 Query: 390 gtgcagaaaagcaagattttct 411 || ||||| |||| ||| |||| Sbjct: 431 gtccagaagagcaggatcttct 452
>gb|AF440310.1| Vitis vinifera actin depolymerizing factor (ADF) mRNA, complete cds Length = 665 Score = 50.1 bits (25), Expect = 0.015 Identities = 79/97 (81%) Strand = Plus / Plus Query: 336 gagaacgactgcagatatgcgctttatgattttgactttgttactggggagaatgtgcag 395 ||||| || ||| ||||||| ||||||| ||||| ||||| ||| |||||| ||| Sbjct: 213 gagaatgattgccgatatgcagtttatgactttgattttgtgacttctgagaattgtcag 272 Query: 396 aaaagcaagattttcttcattgcctggtcccctgaca 432 || |||||||| ||||||||||| ||||| ||||||| Sbjct: 273 aagagcaagatattcttcattgcatggtctcctgaca 309
>emb|CT828434.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI001P14, full insert sequence Length = 748 Score = 48.1 bits (24), Expect = 0.059 Identities = 39/44 (88%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 394 cagaagagcaagatattcttcattgcatggtctcctgatacatc 437
>emb|CT828433.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA003H03, full insert sequence Length = 802 Score = 48.1 bits (24), Expect = 0.059 Identities = 39/44 (88%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 345 cagaagagcaagatattcttcattgcatggtctcctgatacatc 388
>ref|NM_001060991.1| Oryza sativa (japonica cultivar-group) Os05g0113400 (Os05g0113400) mRNA, partial cds Length = 2402 Score = 48.1 bits (24), Expect = 0.059 Identities = 39/44 (88%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2040 cagaagagcaagatattcttcattgcatggtctcctgatacatc 2083
>ref|NM_114469.2| Arabidopsis thaliana ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding (ADF2) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>gb|BT000377.1| Arabidopsis thaliana actin depolymerizing factor 2 (At3g46000) mRNA, complete cds Length = 446 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 260 catggtctccggacac 275
>gb|AY064660.1| Arabidopsis thaliana actin depolymerizing factor 2 (ADF2) (At3g46000; F16L2_210) mRNA, complete cds Length = 446 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 260 catggtctccggacac 275
>emb|Z14110.1|LLADF L.longiflorum mRNA for actin depolymerizing factor Length = 544 Score = 48.1 bits (24), Expect = 0.059 Identities = 39/44 (88%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||| |||||||| |||||||| ||||||| ||||||||||| Sbjct: 253 cagaagagcaagatcttcttcatctcctggtctcctgacacatc 296
>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor Length = 546 Score = 48.1 bits (24), Expect = 0.059 Identities = 69/84 (82%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 452 ||||| |||||||| |||||| | ||||||||||||| || | |||| ||| |||| Sbjct: 260 cagaagagcaagatcttcttcttctcctggtcccctgatactgcacgcacccggagcaag 319 Query: 453 atgctgtactccacctccaaggac 476 ||||||||| ||| |||||||||| Sbjct: 320 atgctgtacgccagctccaaggac 343
>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor Length = 589 Score = 48.1 bits (24), Expect = 0.059 Identities = 69/84 (82%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 452 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 323 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 382 Query: 453 atgctgtactccacctccaaggac 476 ||||||||| ||| |||||||||| Sbjct: 383 atgctgtacgccagctccaaggac 406
>gb|AF386925.1|AF386925 Arabidopsis thaliana actin depolymerizing factor 2 (F16L2_210) mRNA, complete cds Length = 805 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>gb|AF370482.1|AF370482 Arabidopsis thaliana actin depolymerizing factor 2; ADF2 (F16L2_210) mRNA, complete cds Length = 832 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>dbj|AK102177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086L12, full insert sequence Length = 2402 Score = 48.1 bits (24), Expect = 0.059 Identities = 39/44 (88%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 436 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2040 cagaagagcaagatattcttcattgcatggtctcctgatacatc 2083
>emb|BX823115.1|CNS0A784 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 297 tttacgatttcgactttgtaactgcggagaactgccagaagagcaagatcttcttcattg 356 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 357 catggtctccggacac 372
>gb|AY104025.1| Zea mays PCO095832 mRNA sequence Length = 894 Score = 48.1 bits (24), Expect = 0.059 Identities = 69/84 (82%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 452 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 309 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 368 Query: 453 atgctgtactccacctccaaggac 476 ||||||||| ||| |||||||||| Sbjct: 369 atgctgtacgccagctccaaggac 392
>gb|DQ306754.1| Hevea brasiliensis isolate SSH25 mRNA sequence Length = 670 Score = 48.1 bits (24), Expect = 0.059 Identities = 54/64 (84%) Strand = Plus / Minus Query: 393 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 452 ||||| |||||||| ||||||||| | ||||| ||| ||||| || |||||||||||| Sbjct: 355 cagaagagcaagatcttcttcattccatggtctccttcaacatctcgaatccgagccaag 296 Query: 453 atgc 456 |||| Sbjct: 295 atgc 292
>gb|U48939.1|ATU48939 Arabidopsis thaliana actin depolymerizing factor 2 (AtADF2) mRNA, complete cds Length = 808 Score = 48.1 bits (24), Expect = 0.059 Identities = 63/76 (82%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 332 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 391 Query: 418 cctggtcccctgacac 433 | ||||| || ||||| Sbjct: 392 catggtctccggacac 407
>gb|DQ245820.1| Zea mays clone 20613 mRNA sequence Length = 654 Score = 46.1 bits (23), Expect = 0.23 Identities = 29/31 (93%) Strand = Plus / Plus Query: 393 cagaaaagcaagattttcttcattgcctggt 423 ||||| |||||||||||||||||||| |||| Sbjct: 317 cagaagagcaagattttcttcattgcttggt 347
>emb|CT828002.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN010G13, full insert sequence Length = 804 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Plus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 |||||||||||||||| |||| |||||| || |||||||| ||||||||||| Sbjct: 222 agacattcctggagctccagaggaagaaatcacaccgctatgtcatcttcaagat 276
>ref|NM_001073859.1| Oryza sativa (japonica cultivar-group) Os12g0628100 (Os12g0628100) mRNA, complete cds Length = 698 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Plus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 121 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 175
>emb|AM111328.1| Plantago major mRNA for actin-depolymerizing factor (adf1 gene) Length = 834 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 399 agcaagattttcttcattgcctggtcccctgacac 433 |||| |||||||||| ||||||||||||| ||||| Sbjct: 374 agcaggattttcttcgttgcctggtcccccgacac 408
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Minus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 48082 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 48028
>gb|BT013236.1| Lycopersicon esculentum clone 134498R, mRNA sequence Length = 837 Score = 46.1 bits (23), Expect = 0.23 Identities = 26/27 (96%) Strand = Plus / Plus Query: 159 aatgcatcctctggcatgggagttgct 185 |||||||||||||||||||| |||||| Sbjct: 137 aatgcatcctctggcatgggggttgct 163
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Minus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 26923115 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 26923061
>gb|AY038062.1| Petunia x hybrida actin-depolymerizing factor 2 gene, complete cds Length = 6266 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 aagatagaagaaaagcaaaagcaggttgttgtgga 283 ||||| ||||| ||||||||| ||||||||||||| Sbjct: 5254 aagattgaagagaagcaaaaggaggttgttgtgga 5288
>gb|AF183904.1|AF183904 Petunia x hybrida actin-depolymerizing factor 2 (ADF2) mRNA, complete cds Length = 848 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 aagatagaagaaaagcaaaagcaggttgttgtgga 283 ||||| ||||| ||||||||| ||||||||||||| Sbjct: 166 aagattgaagagaagcaaaaggaggttgttgtgga 200 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 attttcttcattgcctggtcccctgacac 433 |||||||||||||| ||||| |||||||| Sbjct: 322 attttcttcattgcttggtctcctgacac 350
>dbj|AK121150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I07, full insert sequence Length = 699 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Plus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 122 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 176
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 46.1 bits (23), Expect = 0.23 Identities = 47/55 (85%) Strand = Plus / Minus Query: 199 agacattcctggagcttcagatgaagaaggcatttcgctatgttatcttcaagat 253 ||||||| ||||||||||||| |||||| || |||||||| ||||||||||| Sbjct: 127082 agacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 127028
>ref|NM_114470.1| Arabidopsis thaliana ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) (ADF1) mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 348 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 405
>gb|AY062940.1| Arabidopsis thaliana putative actin depolymerizing factor 1 (At3g46010) mRNA, complete cds Length = 451 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 206 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 263
>gb|AY035154.1| Arabidopsis thaliana putative actin depolymerizing factor ADF1 (At3g46010) mRNA, complete cds Length = 811 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 344 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 401
>gb|AY085853.1| Arabidopsis thaliana clone 1907 mRNA, complete sequence Length = 831 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 344 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 401
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 44.1 bits (22), Expect = 0.91 Identities = 55/66 (83%) Strand = Plus / Minus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 417 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 104403 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 104344 Query: 418 cctggt 423 | |||| Sbjct: 104343 catggt 104338 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Minus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 106362 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 106305
>emb|BX826248.1|CNS0A69V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 333 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 390
>gb|AF179295.1|AF179295 Malus domestica putative actin depolymerizing factor (ADF) mRNA, complete cds Length = 1022 Score = 44.1 bits (22), Expect = 0.91 Identities = 60/70 (85%), Gaps = 2/70 (2%) Strand = Plus / Plus Query: 345 tgcagatatgcgctttatgattttgactttgttactggggagaa-tgtgcagaaaagcaa 403 ||||||||||| | ||||||||||||||||| |||| ||||| ||| || ||||||| Sbjct: 326 tgcagatatgctgtctatgattttgactttgtgactgtagagaactgt-cacaaaagcag 384 Query: 404 gattttcttc 413 |||||||||| Sbjct: 385 gattttcttc 394
>gb|AF102173.1|AF102173 Arabidopsis thaliana actin depolymerizing factor 1 (ADF1) gene, complete cds Length = 5543 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 4712 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 4769
>gb|U48938.1|ATU48938 Arabidopsis thaliana actin depolymerizing factor 1 (AtADF1) mRNA, complete cds Length = 670 Score = 44.1 bits (22), Expect = 0.91 Identities = 49/58 (84%) Strand = Plus / Plus Query: 358 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 415 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 328 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 385
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 tcgacgtcctccgtgaccggg 564 ||||||||||||||||||||| Sbjct: 1425523 tcgacgtcctccgtgaccggg 1425543
>gb|AY813043.1| Schistosoma japonicum SJCHGC06678 protein mRNA, complete cds Length = 1190 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 atttcgctatgttatcttcaagata 254 |||||||||||||||||| |||||| Sbjct: 71 atttcgctatgttatcttgaagata 47
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 107 agccgccgcccacctctgccccgac 131 |||||||||||| |||||||||||| Sbjct: 1390466 agccgccgcccagctctgccccgac 1390442
>gb|AC099543.2| Homo sapiens chromosome 3 clone RP11-554B20, complete sequence Length = 156107 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 cacctcctccaatgcatcctc 169 ||||||||||||||||||||| Sbjct: 97573 cacctcctccaatgcatcctc 97593
>gb|AF112887.1|AF112887 Populus x canescens actin depolymerizing factor mRNA, partial cds Length = 721 Score = 42.1 bits (21), Expect = 3.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 237 tatgttatcttcaagatagaagaaaagcaaaagcaggttgttgtggagaagac 289 ||||| |||||||| || || |||||| | ||| ||||||| ||||||||||| Sbjct: 84 tatgtgatcttcaaaattgatgaaaagaagaaggaggttgtggtggagaagac 136
>gb|AC137672.2| Homo sapiens chromosome 3 clone RP11-72I12, complete sequence Length = 150313 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cacctcctccaatgcatcctc 169 ||||||||||||||||||||| Sbjct: 149114 cacctcctccaatgcatcctc 149094 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 160,505,383 Number of extensions: 8552255 Number of successful extensions: 168577 Number of sequences better than 10.0: 77 Number of HSP's gapped: 168558 Number of HSP's successfully gapped: 89 Length of query: 957 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 934 Effective length of database: 18,503,978,556 Effective search space: 17282715971304 Effective search space used: 17282715971304 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)