ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf79c15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001058482.1| Oryza sativa (japonica cultivar-group) Os03g... 438 e-119
2dbj|AK058786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-119
3dbj|AK120953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-118
4gb|DQ244166.1| Zea mays clone 2704 mRNA sequence 381 e-102
5gb|BT017656.1| Zea mays clone EL01N0440C07.c mRNA sequence 367 4e-98
6gb|AY105605.1| Zea mays PCO095958 mRNA sequence 327 3e-86
7gb|AC128647.8| Oryza sativa (japonica cultivar-group) chromosome... 117 6e-23
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 6e-23
9gb|DQ244696.1| Zea mays clone 10128 mRNA sequence 64 7e-07
10gb|BT012772.1| Lycopersicon esculentum clone 113750F, mRNA sequence 60 1e-05
11gb|AC114536.18| Mus musculus chromosome 1, clone RP23-42M9, comp... 48 0.043
12gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, co... 46 0.17
13gb|AC127376.3| Mus musculus BAC clone RP23-49A4 from chromosome ... 46 0.17
14gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-4... 46 0.17
15gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete se... 46 0.17
16ref|XM_960424.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.67
17gb|AC188632.4| Canis Familiaris chromosome 6, clone XX-258K15, c... 42 2.6
18dbj|AK231373.1| Sus scrofa mRNA, clone:ITT010050C06, expressed i... 42 2.6
19gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosom... 42 2.6
20gb|AY663402.1| Gorilla gorilla voucher Coriell Cell Repository D... 42 2.6
21gb|AC121783.2| Mus musculus BAC clone RP23-370I9 from 18, comple... 42 2.6
22gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p... 42 2.6
23gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chrom... 42 2.6
24gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, comple... 42 2.6
25dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 2.6
26gb|AF269669.1|AF269669 Staphylococcus epidermidis strain SR1 clo... 42 2.6
27emb|AJ630660.1| Cicer arietinum partial mRNA for hypothetical pr... 42 2.6
28gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 42 2.6
29gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 42 2.6
30gb|U34374.1|HSTECTXT08 Human tyrosine kinase TXK (txk) gene, exo... 42 2.6
31gb|U07794.1|HSTXK Human tyrosine kinase (TXK) gene, exon 12 and ... 42 2.6

>ref|NM_001058482.1| Oryza sativa (japonica cultivar-group) Os03g0856200 (Os03g0856200)
           mRNA, partial cds
          Length = 3382
 Score =  438 bits (221), Expect = e-119
 Identities = 395/453 (87%)
 Strand = Plus / Plus

                                                                       
Query: 87  aagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgagaggttc 146
           |||||||| || || ||||||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 119 aagatgatactagcggtgctcttctccaactccgacggcaacatcctcatcgagcgcttc 178

                                                                       
Query: 147 catggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggcgcc 206
           ||||| || || ||||||||  ||||||||||||| || |||||||||||||| ||||||
Sbjct: 179 catggtgttcccgcggaggaaaggctgcactggcgttctttcctcgtcaagcttggcgcc 238

                                                                       
Query: 207 gagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtctcc 266
           || ||||||||||||||||||  ||||||||||||||| || || |||||||| ||||| 
Sbjct: 239 gacaacctcaagggggccaagaacgaggagctcctcgttgcctctcacaagtccgtctct 298

                                                                       
Query: 267 attgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatatgat 326
           ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 299 attgtttatacaatgattggggatgtctgcctgtacattgttggcaaggatgaatatgat 358

                                                                       
Query: 327 gagcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgtgcg 386
           |||||||||||| | |||||||| || ||  | || ||||| ||||||||||| |||| |
Sbjct: 359 gagcttgctctggccgaggtgatatttgcaatcacatcggcagtgaaggatgtatgtggg 418

                                                                       
Query: 387 aaaccacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgccttgac 446
           ||||| || || ||| | |||||||| ||||| ||||||||||||||  |||||||||| 
Sbjct: 419 aaaccgcctacggagaggctcttccttgacaaatacgggaggatctgcttgtgccttgat 478

                                                                       
Query: 447 gagatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctgatc 506
           ||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 479 gagattgtttggaagggtctgctggagaacacggagaaggacagagtccggaggttgatc 538

                                            
Query: 507 aggctcaagcccccagtggagccatgatttttt 539
           ||||| ||||| || || |||||||||||||||
Sbjct: 539 aggctaaagccgcccgttgagccatgatttttt 571



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>dbj|AK058786.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-E01, full
           insert sequence
          Length = 706

 Score =  438 bits (221), Expect = e-119
 Identities = 395/453 (87%)
 Strand = Plus / Plus

                                                                       
Query: 87  aagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgagaggttc 146
           |||||||| || || ||||||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 97  aagatgatactagcggtgctcttctccaactccgacggcaacatcctcatcgagcgcttc 156

                                                                       
Query: 147 catggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggcgcc 206
           ||||| || || ||||||||  ||||||||||||| || |||||||||||||| ||||||
Sbjct: 157 catggtgttcccgcggaggaaaggctgcactggcgttctttcctcgtcaagcttggcgcc 216

                                                                       
Query: 207 gagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtctcc 266
           || ||||||||||||||||||  ||||||||||||||| || || |||||||| ||||| 
Sbjct: 217 gacaacctcaagggggccaagaacgaggagctcctcgttgcctctcacaagtccgtctct 276

                                                                       
Query: 267 attgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatatgat 326
           ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 277 attgtttatacaatgattggggatgtctgcctgtacattgttggcaaggatgaatatgat 336

                                                                       
Query: 327 gagcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgtgcg 386
           |||||||||||| | |||||||| || ||  | || ||||| ||||||||||| |||| |
Sbjct: 337 gagcttgctctggccgaggtgatatttgcaatcacatcggcagtgaaggatgtatgtggg 396

                                                                       
Query: 387 aaaccacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgccttgac 446
           ||||| || || ||| | |||||||| ||||| ||||||||||||||  |||||||||| 
Sbjct: 397 aaaccgcctacggagaggctcttccttgacaaatacgggaggatctgcttgtgccttgat 456

                                                                       
Query: 447 gagatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctgatc 506
           ||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 457 gagattgtttggaagggtctgctggagaacacggagaaggacagagtccggaggttgatc 516

                                            
Query: 507 aggctcaagcccccagtggagccatgatttttt 539
           ||||| ||||| || || |||||||||||||||
Sbjct: 517 aggctaaagccgcccgttgagccatgatttttt 549



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>dbj|AK120953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038P17, full
           insert sequence
          Length = 3386

 Score =  432 bits (218), Expect = e-118
 Identities = 395/454 (87%)
 Strand = Plus / Plus

                                                                       
Query: 86  gaagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgagaggtt 145
           ||||||||| || || ||||||||| |||||||||| |||||||||||||||||| | ||
Sbjct: 123 gaagatgatactagcggtgctcttctccaactccgacggcaacatcctcatcgagcgctt 182

                                                                       
Query: 146 ccatggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggcgc 205
           |||||| || || ||||||||  ||||||||||||| || |||||||||||||| |||||
Sbjct: 183 ccatggtgttcccgcggaggaaaggctgcactggcgttctttcctcgtcaagcttggcgc 242

                                                                       
Query: 206 cgagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtctc 265
           ||| ||||||||||||||||||  ||||||||||||||| ||  | |||||||| |||||
Sbjct: 243 cgacaacctcaagggggccaagaacgaggagctcctcgttgcccctcacaagtccgtctc 302

                                                                       
Query: 266 cattgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatatga 325
            ||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 tattgtttatacaatgattggggatgtctgcctgtacattgttggcaaggatgaatatga 362

                                                                       
Query: 326 tgagcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgtgc 385
           ||||||||||||| | |||||||| || ||  | || ||||| ||||||||||| |||| 
Sbjct: 363 tgagcttgctctggccgaggtgatatttgcaatcacatcggcagtgaaggatgtatgtgg 422

                                                                       
Query: 386 gaaaccacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgccttga 445
           |||||| || || ||| | |||||||| ||||| ||||||||||||||  ||||||||||
Sbjct: 423 gaaaccgcctacggagaggctcttccttgacaaatacgggaggatctgcttgtgccttga 482

                                                                       
Query: 446 cgagatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctgat 505
            ||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 483 tgagattgtttggaagggtctgctggagaacacggagaaggacagagtccggaggttgat 542

                                             
Query: 506 caggctcaagcccccagtggagccatgatttttt 539
           |||||| ||||| || || |||||||||||||||
Sbjct: 543 caggctaaagccgcccgttgagccatgatttttt 576



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>gb|DQ244166.1| Zea mays clone 2704 mRNA sequence
          Length = 706

 Score =  381 bits (192), Expect = e-102
 Identities = 384/448 (85%)
 Strand = Plus / Plus

                                                                       
Query: 89  gatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgagaggttcca 148
           |||||| || ||||||||||||||||||||||| || ||||||||  ||||| | |||||
Sbjct: 73  gatgatactggccgtgctcttcgccaactccgatggaaacatccttgtcgagcgattcca 132

                                                                       
Query: 149 tggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggcgccga 208
           ||| || || ||||||||| |||| ||||||||||||||||| || ||||||||  ||||
Sbjct: 133 tggggttcccgcggaggagaggctccactggcgctccttcctggtgaagctcggatccga 192

                                                                       
Query: 209 gaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtctccat 268
           ||||||||| ||| |||||  ||||||||||| ||| || ||||||||||| || || ||
Sbjct: 193 gaacctcaaagggtccaagaacgaggagctccacgttgcctcccacaagtctgtgtctat 252

                                                                       
Query: 269 tgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatatgatga 328
           ||| ||||||| | ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 253 tgtttataccacggtcggggatgtctgcctctacattgttggcaaggatgaatatgatga 312

                                                                       
Query: 329 gcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgtgcgaa 388
           ||||||| || | ||||||||||| ||  |||| || || || |||||||| ||||||||
Sbjct: 313 gcttgctttggctgaggtgatctttgcaattacatcagcagtcaaggatgtttgtgcgaa 372

                                                                       
Query: 389 accacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgccttgacga 448
           ||| || ||||||||||||||||| ||||| ||||||||||||||  |||||||||| ||
Sbjct: 373 acctcctaccgagcgcctcttccttgacaaatacgggaggatctgcttgtgccttgatga 432

                                                                       
Query: 449 gatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctgatcag 508
           ||| |||||| |||||||||| || ||||||||||| ||||| ||  ||||| |||| ||
Sbjct: 433 gattgtttggaaggggttgcttgaaaacacggagaaagacagagtgaggaggttgattag 492

                                       
Query: 509 gctcaagcccccagtggagccatgattt 536
            || |||||||| |||||||||| ||||
Sbjct: 493 actaaagccccctgtggagccataattt 520



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>gb|BT017656.1| Zea mays clone EL01N0440C07.c mRNA sequence
          Length = 811

 Score =  367 bits (185), Expect = 4e-98
 Identities = 384/449 (85%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 89  gatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgagaggttcca 148
           |||||| || ||||||||||||||||||||||| || ||||||||  ||||| | |||||
Sbjct: 82  gatgatactggccgtgctcttcgccaactccgatggaaacatccttgtcgagcgattcca 141

                                                                       
Query: 149 tggcgtcccggcggaggagcggctgcac-tggcgctccttcctcgtcaagctcggcgccg 207
           ||| || || ||||||||| |||| ||| |||||||||||||| || ||||||||  |||
Sbjct: 142 tggggttcccgcggaggagaggctccacgtggcgctccttcctggtgaagctcggatccg 201

                                                                       
Query: 208 agaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtctcca 267
           |||||||||| ||| |||||  ||||||||||| ||| || ||||||||||| || || |
Sbjct: 202 agaacctcaaagggtccaagaacgaggagctccacgttgcctcccacaagtctgtgtcta 261

                                                                       
Query: 268 ttgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatatgatg 327
           |||| ||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 262 ttgtttataccacggtcggggatgtctgcctctacattgttggcaaggatgaatatgatg 321

                                                                       
Query: 328 agcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgtgcga 387
           |||||||| || | ||||||||||| ||  |||| || || || |||||||| |||||||
Sbjct: 322 agcttgctttggctgaggtgatctttgcaattacatcagcagtcaaggatgtttgtgcga 381

                                                                       
Query: 388 aaccacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgccttgacg 447
           |||| || ||||||||||||||||| ||||| ||||||||||||||  |||||||||| |
Sbjct: 382 aacctcctaccgagcgcctcttccttgacaaatacgggaggatctgcttgtgccttgatg 441

                                                                       
Query: 448 agatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctgatca 507
           |||| |||||| |||||||||| || ||||||||||| ||||| ||  ||||| |||| |
Sbjct: 442 agattgtttggaaggggttgcttgaaaacacggagaaagacagagtgaggaggttgatta 501

                                        
Query: 508 ggctcaagcccccagtggagccatgattt 536
           | || |||||||| |||||||||| ||||
Sbjct: 502 gactaaagccccctgtggagccataattt 530



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>gb|AY105605.1| Zea mays PCO095958 mRNA sequence
          Length = 744

 Score =  327 bits (165), Expect = 3e-86
 Identities = 336/393 (85%)
 Strand = Plus / Plus

                                                                       
Query: 144 ttccatggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggc 203
           |||||||| || || ||||||||| |||| ||||||||||||||||| || |||||||| 
Sbjct: 129 ttccatggggttcccgcggaggagaggctccactggcgctccttcctggtgaagctcgga 188

                                                                       
Query: 204 gccgagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagtcggtc 263
            ||||||||||||| ||| |||||  ||||||||||| ||| || ||||||||||| || 
Sbjct: 189 tccgagaacctcaaagggtccaagaacgaggagctccacgttgcctcccacaagtctgtg 248

                                                                       
Query: 264 tccattgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaatat 323
           || ||||| ||||||| | ||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 249 tctattgtttataccacggtcggggatgtctgcctctacattgttggcaaggatgaatat 308

                                                                       
Query: 324 gatgagcttgctctgtcggaggtgatcttcgctgttacgtcggcggtgaaggatgtgtgt 383
           |||||||||||| || | ||||||||||| ||  |||| || || || |||||||| |||
Sbjct: 309 gatgagcttgctttggctgaggtgatctttgcaattacatcagcagtcaaggatgtttgt 368

                                                                       
Query: 384 gcgaaaccacccaccgagcgcctcttcctcgacaagtacgggaggatctgtctgtgcctt 443
           || ||||| || ||||||||||||||||| ||||| ||||||||||||||  ||||||||
Sbjct: 369 gcaaaacctcctaccgagcgcctcttccttgacaaatacgggaggatctgcttgtgcctt 428

                                                                       
Query: 444 gacgagatcgtttggcaggggttgctggagaacacggagaaggacagggtccggaggctg 503
           || ||||| |||||| |||||||||| || ||||||||||| ||||| ||  ||||| ||
Sbjct: 429 gatgagattgtttggaaggggttgcttgaaaacacggagaaagacagagtgaggaggttg 488

                                            
Query: 504 atcaggctcaagcccccagtggagccatgattt 536
           || || || |||||||| |||||||||| ||||
Sbjct: 489 attagactaaagccccctgtggagccataattt 521



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>gb|AC128647.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0062G19, complete sequence
          Length = 92392

 Score =  117 bits (59), Expect = 6e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                         
Query: 144   ttccatggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggc 203
             |||||||| || || ||||||||  ||||||||||||| || |||||||||||||| |||
Sbjct: 60511 ttccatggtgttcccgcggaggaaaggctgcactggcgttctttcctcgtcaagcttggc 60570

                                                                    
Query: 204   gccgagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagt 258
             ||||| ||||||||||||||||||  ||||||||||||||| || || |||||||
Sbjct: 60571 gccgacaacctcaagggggccaagaacgaggagctcctcgttgcctctcacaagt 60625



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                         
Query: 261   gtctccattgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaa 320
             ||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 61383 gtctctattgtttatacaatgattggggatgtctgcctgtacattgttggcaaggatgaa 61442

                             
Query: 321   tatgatgagcttgctc 336
             ||||||||||||||||
Sbjct: 61443 tatgatgagcttgctc 61458



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                         
Query: 466   tgctggagaacacggagaaggacagggtccggaggctgatcaggctcaagcccccagtgg 525
             ||||||||||||||||||||||||| ||||||||| |||||||||| ||||| || || |
Sbjct: 61821 tgctggagaacacggagaaggacagagtccggaggttgatcaggctaaagccgcccgttg 61880

                           
Query: 526   agccatgatttttt 539
             ||||||||||||||
Sbjct: 61881 agccatgatttttt 61894



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                         
Query: 363   tcggcggtgaaggatgtgtgtgcgaaaccacccaccgagcgcctcttcctcgacaagtac 422
             ||||| ||||||||||| |||| |||||| || || ||| | |||||||| ||||| |||
Sbjct: 61607 tcggcagtgaaggatgtatgtgggaaaccgcctacggagaggctcttccttgacaaatac 61666

                                                 
Query: 423   gggaggatctgtctgtgccttgacgagatcgtttgg 458
             |||||||||||  |||||||||| ||||| ||||||
Sbjct: 61667 gggaggatctgcttgtgccttgatgagattgtttgg 61702



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 87    aagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgag 140
             |||||||| || || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 60228 aagatgatactagcggtgctcttctccaactccgacggcaacatcctcatcgag 60281



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  117 bits (59), Expect = 6e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                            
Query: 144      ttccatggcgtcccggcggaggagcggctgcactggcgctccttcctcgtcaagctcggc 203
                |||||||| || || ||||||||  ||||||||||||| || |||||||||||||| |||
Sbjct: 35896702 ttccatggtgttcccgcggaggaaaggctgcactggcgttctttcctcgtcaagcttggc 35896761

                                                                       
Query: 204      gccgagaacctcaagggggccaagtccgaggagctcctcgtcgcttcccacaagt 258
                ||||| ||||||||||||||||||  ||||||||||||||| || || |||||||
Sbjct: 35896762 gccgacaacctcaagggggccaagaacgaggagctcctcgttgcctctcacaagt 35896816



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                            
Query: 261      gtctccattgtgtataccatgatcggggacgtctgcctgtacattgttggcaaggatgaa 320
                ||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 35897574 gtctctattgtttatacaatgattggggatgtctgcctgtacattgttggcaaggatgaa 35897633

                                
Query: 321      tatgatgagcttgctc 336
                ||||||||||||||||
Sbjct: 35897634 tatgatgagcttgctc 35897649



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 466      tgctggagaacacggagaaggacagggtccggaggctgatcaggctcaagcccccagtgg 525
                ||||||||||||||||||||||||| ||||||||| |||||||||| ||||| || || |
Sbjct: 35898012 tgctggagaacacggagaaggacagagtccggaggttgatcaggctaaagccgcccgttg 35898071

                              
Query: 526      agccatgatttttt 539
                ||||||||||||||
Sbjct: 35898072 agccatgatttttt 35898085



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                            
Query: 363      tcggcggtgaaggatgtgtgtgcgaaaccacccaccgagcgcctcttcctcgacaagtac 422
                ||||| ||||||||||| |||| |||||| || || ||| | |||||||| ||||| |||
Sbjct: 35897798 tcggcagtgaaggatgtatgtgggaaaccgcctacggagaggctcttccttgacaaatac 35897857

                                                    
Query: 423      gggaggatctgtctgtgccttgacgagatcgtttgg 458
                |||||||||||  |||||||||| ||||| ||||||
Sbjct: 35897858 gggaggatctgcttgtgccttgatgagattgtttgg 35897893



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 87       aagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcgag 140
                |||||||| || || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 35896419 aagatgatactagcggtgctcttctccaactccgacggcaacatcctcatcgag 35896472



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>gb|DQ244696.1| Zea mays clone 10128 mRNA sequence
          Length = 706

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                               
Query: 230 cgaggagctcctcgtcgcttcccacaagtcggtctccattgtgtataccatg 281
           |||||||||||||||||||| |||||||||||| |  || ||||||||||||
Sbjct: 193 cgaggagctcctcgtcgcttgccacaagtcggtttatatcgtgtataccatg 244



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 414 gacaagtacgggaggatctgtctgtgccttgacgagatcgtttggcaggggttgctggag 473
           ||||| ||||| ||||| ||| |||| ||||| |||||||||||| | ||  | ||||||
Sbjct: 377 gacaaatacggaaggatttgtttgtgtcttgatgagatcgtttggaacggactcctggag 436

                             
Query: 474 aacacggagaaggacagg 491
           ||||| || |||||||||
Sbjct: 437 aacaccgacaaggacagg 454



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>gb|BT012772.1| Lycopersicon esculentum clone 113750F, mRNA sequence
          Length = 872

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 102 gtgctcttcgccaactccgagggcaacatcctcatcga 139
           ||||| ||||||||||||||||||||||||||| ||||
Sbjct: 96  gtgctattcgccaactccgagggcaacatcctcgtcga 133



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>gb|AC114536.18| Mus musculus chromosome 1, clone RP23-42M9, complete sequence
          Length = 193978

 Score = 48.1 bits (24), Expect = 0.043
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 545   tgatggatcctgtgtatgtatccctttgttag 576
             ||||||||||||| ||||||||| ||||||||
Sbjct: 34891 tgatggatcctgtttatgtatccatttgttag 34922



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>gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, complete sequence
          Length = 172806

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 603   cttgacacttgtgtggttcttct 625
             |||||||||||||||||||||||
Sbjct: 29830 cttgacacttgtgtggttcttct 29808



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>gb|AC127376.3| Mus musculus BAC clone RP23-49A4 from chromosome 6, complete sequence
          Length = 204528

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 603   cttgacacttgtgtggttcttct 625
             |||||||||||||||||||||||
Sbjct: 29856 cttgacacttgtgtggttcttct 29878



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>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
             sequence
          Length = 113539

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 85    ggaagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcga 139
             |||| ||||| || || ||||| || || ||| ||||||||||||||||||||||
Sbjct: 78364 ggaatatgatccttgcggtgctttttgcgaacgccgagggcaacatcctcatcga 78310



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>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence
          Length = 93126

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 85    ggaagatgattctcgccgtgctcttcgccaactccgagggcaacatcctcatcga 139
             |||| ||||| || || ||||| || || ||| ||||||||||||||||||||||
Sbjct: 45077 ggaatatgatccttgcggtgctttttgcgaacgccgagggcaacatcctcatcga 45023



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>ref|XM_960424.1| Neurospora crassa OR74A hypothetical protein (NCU01886.1) partial
            mRNA
          Length = 2424

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 221  ggccaagtccgaggagctcctcgtcg 246
            ||||||| ||||||||||||||||||
Sbjct: 1198 ggccaaggccgaggagctcctcgtcg 1173



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>gb|AC188632.4| Canis Familiaris chromosome 6, clone XX-258K15, complete sequence
          Length = 188594

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 652    gttgatgggaatgtaatttggtata 676
              |||||||||||||||| ||||||||
Sbjct: 150247 gttgatgggaatgtaaattggtata 150271



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>dbj|AK231373.1| Sus scrofa mRNA, clone:ITT010050C06, expressed in intestine
          Length = 1174

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 652 gttgatgggaatgtaatttggtata 676
           |||||||||||||||| ||||||||
Sbjct: 618 gttgatgggaatgtaaattggtata 594



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>gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosome 17, complete sequence
          Length = 203927

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 652    gttgatgggaatgtaatttggtata 676
              |||||||||||||||| ||||||||
Sbjct: 170262 gttgatgggaatgtaaattggtata 170286



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>gb|AY663402.1| Gorilla gorilla voucher Coriell Cell Repository DNA sample NG05251 MHC
             class II antigen (HLA-DRB1) gene, complete cds
          Length = 54488

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 652   gttgatgggaatgtaatttggtata 676
             |||||||||||||||| ||||||||
Sbjct: 28065 gttgatgggaatgtaaattggtata 28041



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>gb|AC121783.2| Mus musculus BAC clone RP23-370I9 from 18, complete sequence
          Length = 184366

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   cattgttggcaaggatgaata 322
             |||||||||||||||||||||
Sbjct: 44870 cattgttggcaaggatgaata 44850



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>gb|AC024158.5| Homo sapiens chromosome 3 clone RP11-245A6 map 3p, complete sequence
          Length = 162042

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 652    gttgatgggaatgtaatttggtata 676
              |||||||||||||||| ||||||||
Sbjct: 104002 gttgatgggaatgtaagttggtata 104026



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>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
             complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 652   gttgatgggaatgtaatttggtata 676
             |||||||||| ||||||||||||||
Sbjct: 29823 gttgatgggagtgtaatttggtata 29847



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>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence
          Length = 112187

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 652    gttgatgggaatgtaatttggtata 676
              |||||||||| ||||||||||||||
Sbjct: 107200 gttgatgggagtgtaatttggtata 107224



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 160     cggaggagcggctgcactggc 180
               |||||||||||||||||||||
Sbjct: 1776211 cggaggagcggctgcactggc 1776191



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>gb|AF269669.1|AF269669 Staphylococcus epidermidis strain SR1 clone step.1016d06 genomic
            sequence
          Length = 4331

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 464  gttgctggagaacacggagaa 484
            |||||||||||||||||||||
Sbjct: 2725 gttgctggagaacacggagaa 2705



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>emb|AJ630660.1| Cicer arietinum partial mRNA for hypothetical protein (ORF 316)
          Length = 691

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 312 aaggatgaatatgatgagcttgctctgtcggaggtgatctt 352
           |||||||| || || || |||||| ||||||||||||||||
Sbjct: 201 aaggatgagtacgacgaacttgctttgtcggaggtgatctt 241



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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 464    gttgctggagaacacggagaa 484
              |||||||||||||||||||||
Sbjct: 276413 gttgctggagaacacggagaa 276433



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>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 464    gttgctggagaacacggagaa 484
              |||||||||||||||||||||
Sbjct: 383296 gttgctggagaacacggagaa 383316



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>gb|U34374.1|HSTECTXT08 Human tyrosine kinase TXK (txk) gene, exons 9 and 10
          Length = 6316

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 652  gttgatgggaatgtaatttggtata 676
            |||||||||| ||||||||||||||
Sbjct: 2875 gttgatgggagtgtaatttggtata 2851



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>gb|U07794.1|HSTXK Human tyrosine kinase (TXK) gene, exon 12 and 13, partial cds
          Length = 5189

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 652  gttgatgggaatgtaatttggtata 676
            |||||||||| ||||||||||||||
Sbjct: 1748 gttgatgggagtgtaatttggtata 1724


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 110,625,719
Number of extensions: 5633429
Number of successful extensions: 109216
Number of sequences better than 10.0: 31
Number of HSP's gapped: 109215
Number of HSP's successfully gapped: 40
Length of query: 704
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 682
Effective length of database: 18,508,616,841
Effective search space: 12622876685562
Effective search space used: 12622876685562
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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