>LOC_Os01g48770:12001.t04319:unspliced-genomic 60S ribosomal protein L37a, putative, expressed|
Length = 2585
Score = 77.6 bits (163), Expect(5) = 2e-46
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1 / +2
Query: 115 GTRYGASLRKQIKKMEVSQHSKYFCEFCGK 204
GTRYGASLRKQIKKMEVSQHSKYFCEFCGK
Sbjct: 1067 GTRYGASLRKQIKKMEVSQHSKYFCEFCGK 1156
Score = 72.1 bits (151), Expect(5) = 2e-46
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1 / +2
Query: 202 KFAVKRKAVGIWGCKDCGKVKAGGAYTM 285
+FAVKRKAVGIWGCKDCGKVKAGGAYTM
Sbjct: 1949 QFAVKRKAVGIWGCKDCGKVKAGGAYTM 2032
Score = 55.1 bits (114), Expect(5) = 2e-46
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1 / +2
Query: 286 NTASAVTVRSTIRRLREQTEA*SHYYC 366
+TASAVTVRSTIRRLREQTEA* HY C
Sbjct: 2123 STASAVTVRSTIRRLREQTEA*LHYVC 2203
Score = 36.8 bits (74), Expect(5) = 2e-46
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 76 TKRTKKAGIVGKYGTRY 126
TKRTKKAGIVGKYG +
Sbjct: 949 TKRTKKAGIVGKYGMEF 999
Score = 25.4 bits (49), Expect(5) = 2e-46
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 2 EPSHARRHLP 31
EPSHARR LP
Sbjct: 6 EPSHARRRLP 35
Score = 71.6 bits (150), Expect(5) = 1e-37
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = -3 / -3
Query: 203 FPQNSQKYLEC*DTSIFLICLRRLAPYLVP 114
FPQNSQKYLEC*+TSIFLICLR+LAPYLVP
Sbjct: 1155 FPQNSQKYLEC*ETSIFLICLRKLAPYLVP 1066
Score = 55.1 bits (114), Expect(5) = 1e-37
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2 / -2
Query: 288 VHGIGTTSLDLPTVLASPNSNSFPLHSKL 202
+HG+ TT L LPTVLASP+SN FPLH KL
Sbjct: 2035 LHGVSTTGLHLPTVLASPDSNCFPLHGKL 1949
Score = 49.2 bits (101), Expect(5) = 1e-37
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -3 / -3
Query: 365 Q**CDQASVCSLKRRMVLLTVTALAV 288
Q *C+QASVCSL+RR+VLLTVTALAV
Sbjct: 2202 QT*CNQASVCSLRRRIVLLTVTALAV 2125
Score = 36.3 bits (73), Expect(5) = 1e-37
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / -1
Query: 119 VPYFPTIPAFLVRFV 75
+PY PTIPAFLVRFV
Sbjct: 992 IPYLPTIPAFLVRFV 948
Score = 24.4 bits (47), Expect(5) = 1e-37
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 33 TGRWRRACEGS 1
+GR RRACEGS
Sbjct: 37 SGRRRRACEGS 5
Score = 68.4 bits (143), Expect(5) = 3e-30
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = -3 / -3
Query: 287 FMV*APPALTFPQSLHPQIPTAFLFTANFPQNSQKYLEC 171
FMV*APPA TFPQSLHPQIPTAFLFTAN Q+ C
Sbjct: 2034 FMV*APPAFTFPQSLHPQIPTAFLFTANCNSTQQQQH*C 1918
Score = 57.0 bits (118), Expect(5) = 3e-30
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = -1 / -1
Query: 196 RIHRSTWSAETPPSS*SAYADWHHT 122
R HRSTWSAE PPSS* AYA+WHHT
Sbjct: 1148 RTHRSTWSAEKPPSS*FAYANWHHT 1074
Score = 42.3 bits (86), Expect(5) = 3e-30
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 366 TVVVRSSFGLLPQTADGAPDGDRTS 292
T VV+S F LLPQT D APD DRTS
Sbjct: 2203 TNVVQSGFSLLPQTTDCAPDSDRTS 2129
Score = 22.1 bits (42), Expect(5) = 3e-30
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 31 GEMAARVRGL 2
GE AARVRGL
Sbjct: 35 GEAAARVRGL 6
Score = 21.7 bits (41), Expect(5) = 3e-30
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 117 SILPDDSSLLGALR 76
+I ++SSLLGALR
Sbjct: 990 TIFANNSSLLGALR 949
Score = 58.3 bits (121), Expect(4) = 2e-22
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2 / +3
Query: 122 GMVPVCVSRSRRWRCLSTPSTSVNSAG 202
GMVPVCVS+SRRWR LSTPSTSV+S G
Sbjct: 1074 GMVPVCVSKSRRWRFLSTPSTSVSSVG 1154
Score = 39.1 bits (79), Expect(4) = 2e-22
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 203 SLL*RGKLLEFGDARTVGRSRLVVPIP*T 289
SL *RGK LE GDARTVGR R VV P*+
Sbjct: 1950 SLP*RGKQLESGDARTVGR*RPVVLTP*S 2036
Score = 35.9 bits (72), Expect(4) = 2e-22
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 285 EHG*CGHRQEHHPPFEGAD 341
+H *CGH QEH+P EGAD
Sbjct: 2122 QHC*CGHCQEHNPSSEGAD 2178
Score = 33.1 bits (66), Expect(4) = 2e-22
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +3
Query: 75 DEAHQEGWNRREVW 116
DEAHQEGWN ++W
Sbjct: 948 DEAHQEGWNCWQIW 989
Score = 70.7 bits (148), Expect = 7e-12
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +3 / +1
Query: 171 ALQVLL*ILREVCCEEESCWNLGMQGLWEGQGWWCLYHE 287
AL +LL VC EEES WNLGMQGLWEG+G WCL+HE
Sbjct: 1918 ALMLLLLCAITVCREEESSWNLGMQGLWEGEGRWCLHHE 2034
Score = 45.5 bits (93), Expect(3) = 8e-12
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 286 SWYRHHQP*PSHSPCIPKF 230
SW +HH+P PSHSPCIP+F
Sbjct: 2033 SWCKHHRPSPSHSPCIPRF 1977
Score = 40.5 bits (82), Expect(3) = 8e-12
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 358 SAIKLRSAPSNGGWCS*R*PH*PC 287
SAI+L+SAPS+ G CS*+*PH* C
Sbjct: 2195 SAIRLQSAPSDDGLCS*Q*PH*QC 2124
Score = 25.8 bits (50), Expect(3) = 8e-12
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2 / -2
Query: 204 LPAEFTEXXXXXXXXXXXXXLTQTGTIPGS 115
LP E TE LTQTGTIP +
Sbjct: 1156 LPTELTEVLGVLRNLHLLDLLTQTGTIPST 1067
Score = 50.1 bits (103), Expect = 1e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3 / +1
Query: 123 VWCQSA*ADQEDGGVSALQVLL*ILRE 203
VWCQ A*A+QEDGG SALQVLL*+L E
Sbjct: 1075 VWCQFA*ANQEDGGFSALQVLL*VLWE 1155
>LOC_Os05g48320:12005.t04266:unspliced-genomic 60S ribosomal protein L37a, putative, expressed|
Length = 2118
Score = 79.4 bits (167), Expect(4) = 2e-44
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3 / +2
Query: 204 VCCEEESCWNLGMQGLWEGQGWWCLYHE 287
VCCEEES WNLGMQGLW+GQGWWCL+HE
Sbjct: 1646 VCCEEESSWNLGMQGLWQGQGWWCLHHE 1729
Score = 79.0 bits (166), Expect(4) = 2e-44
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1 / +2
Query: 115 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKR 219
GTRYGASLRKQIKKMEVSQHSKYFCEFCGK + R
Sbjct: 1058 GTRYGASLRKQIKKMEVSQHSKYFCEFCGKVILPR 1162
Score = 47.3 bits (97), Expect(4) = 2e-44
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1 / +2
Query: 286 NTASAVTVRSTIRRLREQTEA*S 354
+TASAVTVRSTIRRLREQTEA*S
Sbjct: 1799 STASAVTVRSTIRRLREQTEA*S 1867
Score = 35.9 bits (72), Expect(4) = 2e-44
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / +3
Query: 76 TKRTKKAGIVGKYG 117
TKRTKKAGIVGKYG
Sbjct: 921 TKRTKKAGIVGKYG 962
Score = 66.1 bits (138), Expect(4) = 2e-34
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -3 / -3
Query: 287 FMV*APPALTFPQSLHPQIPTAFLFTAN 204
FMV*APPALT PQSLHPQIPTAFLFTAN
Sbjct: 1729 FMV*APPALTLPQSLHPQIPTAFLFTAN 1646
Score = 59.3 bits (123), Expect(4) = 2e-34
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -1 / -2
Query: 196 RIHRSTWSAETPPSS*SAYADWHHTWF 116
R RSTWSA PPSS*SAYA+WHHTW+
Sbjct: 1139 RTRRSTWSAGKPPSS*SAYANWHHTWY 1059
Score = 46.4 bits (95), Expect(4) = 2e-34
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = -3 / -1
Query: 353 DQASVCSLKRRMVLLTVTALAV 288
DQASVCSL+RR+VLLTVTALAV
Sbjct: 1866 DQASVCSLRRRIVLLTVTALAV 1801
Score = 35.4 bits (71), Expect(4) = 2e-34
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 119 VPYFPTIPAFLVRFV 75
+PY PTIPAFLVRFV
Sbjct: 964 LPYLPTIPAFLVRFV 920
Score = 72.1 bits (151), Expect(4) = 8e-30
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1 / +3
Query: 202 KFAVKRKAVGIWGCKDCGKVKAGGAYTM 285
+FAVKRKAVGIWGCKDCGKVKAGGAYTM
Sbjct: 1644 QFAVKRKAVGIWGCKDCGKVKAGGAYTM 1727
Score = 55.1 bits (114), Expect(4) = 8e-30
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2 / +3
Query: 119 PGMVPVCVSRSRRWRCLSTPSTSVNS 196
PGMVPVCVSRSRRWR STPSTS +S
Sbjct: 1062 PGMVPVCVSRSRRWRFPSTPSTSASS 1139
Score = 33.6 bits (67), Expect(4) = 8e-30
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3 / +1
Query: 285 EHG*CGHRQEHHPPFEGADR 344
+H CGH Q+H+P EGADR
Sbjct: 1798 QHCQCGHGQKHNPSPEGADR 1857
Score = 30.4 bits (60), Expect(4) = 8e-30
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 75 DEAHQEGWNRREVW 116
DEAHQEG NR ++W
Sbjct: 920 DEAHQEGRNRWQIW 961
Score = 67.0 bits (140), Expect(4) = 2e-22
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = -3 / -1
Query: 236 QIPTAFLFTANFPQNSQKYLEC*DTSIFLICLRRLAPYLVP 114
Q+ L PQNSQKYLEC +TSIFLICLR+LAPYLVP
Sbjct: 1179 QVIINILGRITLPQNSQKYLECWETSIFLICLRKLAPYLVP 1057
Score = 48.7 bits (100), Expect(4) = 2e-22
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 286 SWYRHHQP*PSHSPCIPKF 230
SW RHHQP*P HSPCIP+F
Sbjct: 1728 SWCRHHQP*PCHSPCIPRF 1672
Score = 28.6 bits (56), Expect(4) = 2e-22
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1 / -2
Query: 352 IKLRSAPSNGGWCS*R*PH*PC 287
I+L SAPS G C * *PH C
Sbjct: 1865 IRLLSAPSGDGLCF*P*PHWQC 1800
Score = 21.7 bits (41), Expect(4) = 2e-22
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 117 SILPDDSSLLGALR 76
+I +DS LLGALR
Sbjct: 962 TIFANDSCLLGALR 921
Score = 51.9 bits (107), Expect(2) = 2e-14
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2 / +1
Query: 203 SLL*RGKLLEFGDARTVGRSRLVVPIP*TR 292
SLL*RGK LE GDARTV RSRLVVP P*++
Sbjct: 1645 SLL*RGKQLESGDARTVARSRLVVPTP*SK 1734
Score = 49.2 bits (101), Expect(2) = 2e-14
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3 / +1
Query: 120 QVWCQSA*ADQEDGGVSALQVLL*IL 197
QVWCQ A*ADQEDGG ALQVLL +L
Sbjct: 1063 QVWCQFA*ADQEDGGFPALQVLLRVL 1140
Score = 61.1 bits (127), Expect(3) = 1e-12
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -2 / -2
Query: 288 VHGIGTTSLDLPTVLASPNSNSFPLHSKL 202
+HG+GTTSLDL TVLASP+SN FPLHSKL
Sbjct: 1730 LHGVGTTSLDLATVLASPDSNCFPLHSKL 1644
Score = 27.2 bits (53), Expect(3) = 1e-12
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2 / -3
Query: 351 SSFGLLPQTADGAPDGDRT 295
S F LLPQ D A D DRT
Sbjct: 1864 SGFCLLPQATDCASDRDRT 1808
Score = 25.8 bits (50), Expect(3) = 1e-12
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2 / -3
Query: 222 FPLHSKLPAEFTEXXXXXXXXXXXXXLTQTGTIPGSIL 109
+P + L E E LTQTGTIPG+ +
Sbjct: 1165 YPWKNYLATELAEVLGVLGNLHLLDLLTQTGTIPGTCI 1052
>LOC_Os01g15039:12001.t01357:unspliced-genomic pectinesterase PPE8B precursor, putative, expressed|
Length = 4076
Score = 30.4 bits (60), Expect = 9.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 146 RSRRWRCLSTPSTSVNSA 199
R+RRWRC STP +SA
Sbjct: 3159 RTRRWRCASTPIAPPSSA 3212
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 201,079,084
Number of extensions: 3046045
Number of successful extensions: 13405
Number of sequences better than 10.0: 31
Length of query: 175
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 127
Effective length of database: 52,912,542
Effective search space: 6719892834
Effective search space used: 6719892834
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)