ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0515400:Os04g0515400 184 6e-47
2AB110198:Os02g0479300 153 1e-37
3AK109486:Os04g0346800 139 2e-33
4AK101242:Os04g0346800 139 2e-33
5Os04g0429500:Os04g0429500 30 2.4
6AK110339: 28 7.1
7Os08g0208800:Os08g0208800 28 9.2

>Os04g0515400:Os04g0515400 |
          Length = 137
 Score =  184 bits (467), Expect = 6e-47
 Identities = 96/136 (70%), Positives = 108/136 (79%), Gaps = 3/136 (2%)
 Frame = +2

Query: 2   MEVEGEKKVAMEAE-LGKETKEE--AAADVSLKDLSRRLDDFAKERDWEKHHSPRNLLLA 172
           MEVE +     E   + +ETK+E  AA+DVSLK+LS++LDDFAKERDWE +H+PRNLLLA
Sbjct: 1   MEVEKKATTVEEVRGVEEETKKEEAAASDVSLKELSKKLDDFAKERDWEMYHAPRNLLLA 60

Query: 173 MVGEVGELSELFMWKGEVQKGCPGWXXXXXXXXXXXLSDVLLYLIRLSDMCGVDLGDAAL 352
           M+ EVGELSELFMWKGEV KG PGW           LSDVLLYLIRLSDMCGVDLGDAA 
Sbjct: 61  MIAEVGELSELFMWKGEVAKGLPGWKESEKEHLGEELSDVLLYLIRLSDMCGVDLGDAAT 120

Query: 353 KKIVKNAVKYPAPSKS 400
           +KIVKNAVKYPAPSKS
Sbjct: 121 RKIVKNAVKYPAPSKS 136



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>AB110198:Os02g0479300 |
          Length = 172

 Score =  153 bits (386), Expect = 1e-37
 Identities = 79/129 (61%), Positives = 93/129 (72%)
 Frame = +2

Query: 2   MEVEGEKKVAMEAELGKETKEEAAADVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVG 181
           +EV GE +   +AE        AAA V L++L RR+ DFA+ERDWE+ HSPRNLLLA+VG
Sbjct: 4   VEVVGEGRGGRDAE--------AAATVGLEELRRRMADFARERDWEQFHSPRNLLLALVG 55

Query: 182 EVGELSELFMWKGEVQKGCPGWXXXXXXXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKI 361
           EVGELSE+F WKGEV KG PGW           L+DVLLYL+RLSDMCGVDLG AAL+K+
Sbjct: 56  EVGELSEIFQWKGEVPKGLPGWDEAEKVHLGEELADVLLYLVRLSDMCGVDLGSAALRKL 115

Query: 362 VKNAVKYPA 388
             NA KYPA
Sbjct: 116 EINARKYPA 124



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>AK109486:Os04g0346800 |
          Length = 172

 Score =  139 bits (351), Expect = 2e-33
 Identities = 67/103 (65%), Positives = 80/103 (77%)
 Frame = +2

Query: 77  DVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGEVGELSELFMWKGEVQKGCPGWXXX 256
           +V+L+ L R++ +FA+ERDWE+ HSPRNLLLA+VGEVGELSE+F WKGEV KG PGW   
Sbjct: 23  EVTLETLRRKMSEFARERDWEQFHSPRNLLLALVGEVGELSEVFQWKGEVPKGLPGWGER 82

Query: 257 XXXXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIVKNAVKYP 385
                   L+DVLLYLIRLSDMC VDLG AAL+K+  NA KYP
Sbjct: 83  EVEHLGEELADVLLYLIRLSDMCDVDLGKAALRKMELNARKYP 125



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>AK101242:Os04g0346800 |
          Length = 172

 Score =  139 bits (351), Expect = 2e-33
 Identities = 67/103 (65%), Positives = 80/103 (77%)
 Frame = +2

Query: 77  DVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGEVGELSELFMWKGEVQKGCPGWXXX 256
           +V+L+ L R++ +FA+ERDWE+ HSPRNLLLA+VGEVGELSE+F WKGEV KG PGW   
Sbjct: 23  EVTLETLRRKMSEFARERDWEQFHSPRNLLLALVGEVGELSEVFQWKGEVPKGLPGWGER 82

Query: 257 XXXXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIVKNAVKYP 385
                   L+DVLLYLIRLSDMC VDLG AAL+K+  NA KYP
Sbjct: 83  EVEHLGEELADVLLYLIRLSDMCDVDLGKAALRKMELNARKYP 125



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>Os04g0429500:Os04g0429500 |
          Length = 949

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
 Frame = -1

Query: 234 PFCT-------SPFHMNSSDSSPTSPTMASRRFLGLWCF 139
           PFC        +PF   SS SSP S   A R+FL  W F
Sbjct: 214 PFCRRYGVAVRAPFRYFSSSSSPESGGPADRKFLDDWTF 252



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>AK110339: |
          Length = 1002

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   MEVEGEKKVAMEAELGKETKEEAAADVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVG 181
           ME++ E   AMEA+   E++  AAA+      SR   D A E       S      A+  
Sbjct: 57  MEIDAEADAAMEADADAESELNAAAEAESAIESRADLDAAHENAVVTLESYAEKAHALRD 116

Query: 182 EVGELSELFMWKGEVQKGCP-----GWXXXXXXXXXXXLSDVLLYL-IRLSDMCGVDLGD 343
           E+ E     M +      CP     G                 LYL I+  +     L D
Sbjct: 117 EIIESEHSLMEQMASIDSCPPSELSGLMARAKKQITHLFQIKALYLAIKTQEKQLRALVD 176

Query: 344 AALKKIVKN-AVKYPAPSKSA 403
           A   K V N A K PAP+K A
Sbjct: 177 AGTGKRVPNIAPKTPAPAKLA 197



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>Os08g0208800:Os08g0208800 |
          Length = 914

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 59  KEEAAADVSLKDLSRRLDDFAKERDWEKHHSPRNL 163
           ++  + DV L  ++   ++ AKE++W K H  +NL
Sbjct: 346 RKATSEDVCLALMASTSEEEAKEQEWRKPHEEKNL 380


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,323,731
Number of extensions: 331903
Number of successful extensions: 1155
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1155
Number of HSP's successfully gapped: 7
Length of query: 259
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,435,796
Effective search space: 1829727360
Effective search space used: 1829727360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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