ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9QY93:XTP3A_MOUSE XTP3-transactivated gene A protein homolog - ... 104 4e-22
2Q9H773:XTP3A_HUMAN XTP3-transactivated gene A protein - Homo sap... 102 2e-21
3Q91VC0:XTP3A_RAT XTP3-transactivated gene A protein homolog - Ra... 101 3e-21
4Q32KY6:XTP3A_BOVIN XTP3-transactivated gene A protein homolog - ... 100 6e-21
5Q82K79:RS15_STRAW 30S ribosomal protein S15 - Streptomyces averm... 33 1.6
6Q08378:GOGA3_HUMAN Golgin subfamily A member 3 - Homo sapiens (H... 32 2.1
7O86655:RS15_STRCO 30S ribosomal protein S15 - Streptomyces coeli... 32 2.8
8Q08481:PECA1_MOUSE Platelet endothelial cell adhesion molecule p... 32 3.6
9O88923:LPHN2_RAT Latrophilin-2 precursor - Rattus norvegicus (Rat) 30 8.1

>Q9QY93:XTP3A_MOUSE XTP3-transactivated gene A protein homolog - Mus musculus (Mouse)|
          Length = 170
 Score =  104 bits (259), Expect = 4e-22
 Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
 Frame = +2

Query: 29  AMEAELGKETKEEAAA--------DVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGE 184
           A + E G   +E++AA        + +L+D+ R   +FA ERDWE+ H PRNLLLA+VGE
Sbjct: 4   AGDGERGTVGQEDSAAARPFRFSPEPTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGE 63

Query: 185 VGELSELFMWKGEVQKGCPGWXXXXXXXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIV 364
           VGEL+ELF WK + + G   W           LSDVL+YL+ L+  C VDL  A + K+ 
Sbjct: 64  VGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVISKMD 123

Query: 365 KNAVKYP 385
            N  +YP
Sbjct: 124 TNRQRYP 130



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>Q9H773:XTP3A_HUMAN XTP3-transactivated gene A protein - Homo sapiens (Human)|
          Length = 170

 Score =  102 bits (254), Expect = 2e-21
 Identities = 52/102 (50%), Positives = 66/102 (64%)
 Frame = +2

Query: 83  SLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGEVGELSELFMWKGEVQKGCPGWXXXXX 262
           +L+D+ R   +FA ERDWE+ H PRNLLLA+VGEVGEL+ELF WK + + G  GW     
Sbjct: 30  TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRER 89

Query: 263 XXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIVKNAVKYPA 388
                 LSDVL+YL+ L+  C VDL  A L K+  N  +YPA
Sbjct: 90  AALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPA 131



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>Q91VC0:XTP3A_RAT XTP3-transactivated gene A protein homolog - Rattus norvegicus|
           (Rat)
          Length = 170

 Score =  101 bits (252), Expect = 3e-21
 Identities = 49/101 (48%), Positives = 64/101 (63%)
 Frame = +2

Query: 83  SLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGEVGELSELFMWKGEVQKGCPGWXXXXX 262
           +L+D+ R   +FA ERDWE+ H PRNLLLA+VGEVGEL+ELF WK + + G   W     
Sbjct: 30  TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKSDAEPGPQAWQPKER 89

Query: 263 XXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIVKNAVKYP 385
                 LSDVL+YL+ L+  C VDL  A + K+  N  +YP
Sbjct: 90  AALQEELSDVLIYLVALAARCHVDLPRAVISKMDTNRQRYP 130



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>Q32KY6:XTP3A_BOVIN XTP3-transactivated gene A protein homolog - Bos taurus (Bovine)|
          Length = 169

 Score =  100 bits (249), Expect = 6e-21
 Identities = 49/105 (46%), Positives = 67/105 (63%)
 Frame = +2

Query: 71  AADVSLKDLSRRLDDFAKERDWEKHHSPRNLLLAMVGEVGELSELFMWKGEVQKGCPGWX 250
           +++ +L+D+ R   +FA ERDWE+ H PRNLLLA+VGEVGEL+ELF WK + + G   W 
Sbjct: 25  SSEPTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKPDEEPGPQAWS 84

Query: 251 XXXXXXXXXXLSDVLLYLIRLSDMCGVDLGDAALKKIVKNAVKYP 385
                     LSD+L+YL+ L+  C VDL  A L K+  N  +YP
Sbjct: 85  PRERAALQEELSDILIYLVALAARCRVDLPQAVLCKMDTNRRRYP 129



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>Q82K79:RS15_STRAW 30S ribosomal protein S15 - Streptomyces avermitilis|
          Length = 95

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   MEVEGEKKVAMEAELGKETKEEAAADVSLKDLSRRLDDFAKERDWEKH-HSPRNLLLAMV 178
           M ++   K  +  E G +  +  + +V +  LSRR+ D  +     KH H  R  LL +V
Sbjct: 1   MSLDAATKKQIITEFGTKEGDTGSPEVQVAMLSRRISDLTEHLKTHKHDHHSRRGLLILV 60

Query: 179 GEVGELSELFMWKGEVQK 232
           G+   L + ++ K ++Q+
Sbjct: 61  GQRRRLLQ-YLAKKDIQR 77



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>Q08378:GOGA3_HUMAN Golgin subfamily A member 3 - Homo sapiens (Human)|
          Length = 1498

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +2

Query: 2    MEVEGEKKVAMEAELGKETKEEAAADVSLKDLSRRLDDFAKERDWEKHH 148
            M+V GEK+ A EAEL +  +E A     + DL   L    KERD  + H
Sbjct: 888  MQVHGEKRTA-EAELSRLHREVAQVRQHMADLEGHLQSAQKERDEMETH 935



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>O86655:RS15_STRCO 30S ribosomal protein S15 - Streptomyces coelicolor|
          Length = 95

 Score = 32.0 bits (71), Expect = 2.8
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   MEVEGEKKVAMEAELGKETKEEAAADVSLKDLSRRLDDFAKERDWEKH-HSPRNLLLAMV 178
           M ++   K  +  E G +  +  + +V +  LSRR+ D  +     KH H  R  LL +V
Sbjct: 1   MSLDAAVKKQIITEFGTKEGDTGSPEVQVALLSRRISDLTEHLKTHKHDHHSRRGLLILV 60

Query: 179 GEVGELSELFMWKGEVQK 232
           G+   L + ++ K ++Q+
Sbjct: 61  GQRRRLLQ-YLAKKDIQR 77



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>Q08481:PECA1_MOUSE Platelet endothelial cell adhesion molecule precursor - Mus|
           musculus (Mouse)
          Length = 727

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 246 QPGQPFCTSPFHMNSSDSSPTSPTMASRRFLGLW 145
           Q GQ +CT+    +S  +SP S T+A R FL  W
Sbjct: 555 QEGQYYCTASNRASSMRTSPRSSTLAVRVFLAPW 588



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>O88923:LPHN2_RAT Latrophilin-2 precursor - Rattus norvegicus (Rat)|
          Length = 1487

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 589 IEESETIQDTECGAGLCCLDQLQSADSFYPLVTV*IKTDTKV 714
           I +S +I + E  AG  C D LQ+AD  Y +     +TDT +
Sbjct: 147 IVDSPSIYEAEQKAGAWCKDPLQAADKIYFMPWTPYRTDTLI 188


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 105,200,638
Number of extensions: 1933531
Number of successful extensions: 5777
Number of sequences better than 10.0: 9
Number of HSP's gapped: 5774
Number of HSP's successfully gapped: 9
Length of query: 259
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 148
Effective length of database: 70,239,694
Effective search space: 10395474712
Effective search space used: 10395474712
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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