ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf72p01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111240:Os08g0360000 214 2e-55
2AK068948:Os03g0852500 72 1e-12
3AK120721:Os12g0244200 54 7e-12
4AK062268:Os03g0641500 32 1.7

>AK111240:Os08g0360000 |
          Length = 132
 Score =  214 bits (544), Expect = 2e-55
 Identities = 100/107 (93%), Positives = 103/107 (96%)
 Frame = +1

Query: 253 MFATAARWAAKKGKPKMAPIELTTAPEQAQSITRTIFDVVKEHGPLTISDVWEHVKDVGL 432
           M ATAARWAAKKGKPKMAPIEL   PEQAQSITRTIFDVV+EHGPLTISDVW+HVKDVGL
Sbjct: 1   MLATAARWAAKKGKPKMAPIELPAPPEQAQSITRTIFDVVREHGPLTISDVWDHVKDVGL 60

Query: 433 RGLTSKRQMKIMLRWMREKQKLRLICDHDGPHKQFLYTTWFTNPKNA 573
           RGLTSKRQMKIM+RWMREKQKLRLICDHDGPHKQFLYTTWFTNPKNA
Sbjct: 61  RGLTSKRQMKIMMRWMREKQKLRLICDHDGPHKQFLYTTWFTNPKNA 107



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>AK068948:Os03g0852500 |
          Length = 158

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = +1

Query: 331 EQAQSITRTIFDVVKEHGPLTISDVWEHVKDVGLRGLTSKRQMKIMLRWMREKQKLRLIC 510
           E+A +I+  +  +  +HGPLT+ + W H KD G+ GL SK  MKI+L+WM  ++ ++L C
Sbjct: 46  EEAVAISGRLLQIFTDHGPLTVGNTWNHAKDAGISGLNSKTHMKILLKWMTGRRIVKLNC 105

Query: 511 DHDGPHKQFLYTTW 552
              G  K+FLY+ +
Sbjct: 106 VGTGNSKKFLYSPY 119



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>AK120721:Os12g0244200 |
          Length = 130

 Score = 54.3 bits (129), Expect(3) = 7e-12
 Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = +2

Query: 1538 ERRGTGGAAVGRPPVLSKEMNSTIVSGANTLKGDSN----PDSE*PGWWWDLVDKCP 1696
            ++ G G A   + PVLSKE+ ST V GAN LK  S+    PDSE P W W L+DK P
Sbjct: 34   KKGGKGAADAAKTPVLSKELKSTTVFGANILKEGSDPKLQPDSEYPEWLWHLLDKRP 90



 Score = 28.9 bits (63), Expect(3) = 7e-12
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +1

Query: 1696 VLSELWRKHARALFCEDLSCFVKLDNWDCIK 1788
            +LSEL RK A+ L  EDL  FVKL N   IK
Sbjct: 91   MLSELRRKDAKTLPYEDLKRFVKLVNRARIK 121



 Score = 26.2 bits (56), Expect(3) = 7e-12
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 1440 LSLTSVLKPGVIPRDAA 1490
            ++L  VLK GVIPRDAA
Sbjct: 3    MALRRVLKHGVIPRDAA 19



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>AK062268:Os03g0641500 |
          Length = 133

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = -2

Query: 491 CFSLIHRSMIFICLLLVKPLSPTSLTCSQTSEMVRGPCSLTTSKMVRVMDCACSGA 324
           C  L  R+M+ I  +++   +P   TC Q   + R         ++ + D  C GA
Sbjct: 5   CSELQVRAMVVIAAVMLAAAAPAGTTCEQLESVARSCTGYLKRSLIFLNDACCDGA 60


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 51,408,529
Number of extensions: 1047655
Number of successful extensions: 2717
Number of sequences better than 10.0: 4
Number of HSP's gapped: 2716
Number of HSP's successfully gapped: 6
Length of query: 697
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 589
Effective length of database: 11,075,427
Effective search space: 6523426503
Effective search space used: 6523426503
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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