| Clone Name | FLbaf72p01 |
|---|---|
| Clone Library Name | barley_pub |
>Q66282:POLG_CXB3W Genome polyprotein [Contains: Capsid protein VP4 - Coxsackievirus B3| (strain Woodruff) Length = 2185 Score = 33.5 bits (75), Expect = 3.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 Query: 1661 PGWWWDLVDKCPYSASFGGNMQGH 1732 PGWWW L D FG NMQ H Sbjct: 145 PGWWWKLPDALSNLGLFGQNMQYH 168
>P03313:POLG_CXB3N Genome polyprotein [Contains: Capsid protein VP4 - Coxsackievirus B3| (strain Nancy) Length = 2185 Score = 33.5 bits (75), Expect = 3.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 Query: 1661 PGWWWDLVDKCPYSASFGGNMQGH 1732 PGWWW L D FG NMQ H Sbjct: 145 PGWWWKLPDALSNLGLFGQNMQYH 168
>P13900:POLG_SVDVU Genome polyprotein [Contains: Capsid protein VP4 - Swine vesicular| disease virus (strain UKG/27/72) (SVDV) Length = 2185 Score = 32.3 bits (72), Expect = 8.0 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +2 Query: 1661 PGWWWDLVDKCPYSASFGGNMQGH 1732 PGWWW D FG NMQ H Sbjct: 145 PGWWWKFPDALSNMGLFGQNMQYH 168
>P16604:POLG_SVDVH Genome polyprotein [Contains: Capsid protein VP4 - Swine vesicular| disease virus (strain H/3 '76) (SVDV) Length = 2185 Score = 32.3 bits (72), Expect = 8.0 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +2 Query: 1661 PGWWWDLVDKCPYSASFGGNMQGH 1732 PGWWW D FG NMQ H Sbjct: 145 PGWWWKFPDALSNMGLFGQNMQYH 168
>Q03053:POLG_CXB5P Genome polyprotein [Contains: Capsid protein VP4 - Coxsackievirus B5| (strain Peterborough / 1954/UK/85) Length = 2185 Score = 32.3 bits (72), Expect = 8.0 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +2 Query: 1661 PGWWWDLVDKCPYSASFGGNMQGH 1732 PGWWW D FG NMQ H Sbjct: 145 PGWWWKFPDALSNMGLFGQNMQYH 168 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 318,980,159 Number of extensions: 6359320 Number of successful extensions: 15083 Number of sequences better than 10.0: 5 Number of HSP's gapped: 15071 Number of HSP's successfully gapped: 5 Length of query: 697 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 577 Effective length of database: 67,771,039 Effective search space: 39103889503 Effective search space used: 39103889503 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)