ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72n16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os03g0579300:Os03g0579300 | 265 | 3e-71 | 2 | AK102721:Os03g0337800 | 264 | 6e-71 | 3 | AK059309:Os03g0337800 | 264 | 6e-71 | 4 | AK110270: | 196 | 2e-50 | 5 | D21304:Os03g0337800 | 75 | 6e-14 | 6 | D29721:Os03g0337800 | 37 | 0.019 | 7 | AK104982:Os03g0100200 | 34 | 0.16 | 8 | AK072547:Os03g0100200 | 34 | 0.16 | 9 | AK119848: | 29 | 4.0 | 10 | X56063:Os06g0726200 | 29 | 5.2 | 11 | AY378172:Os06g0726200 | 29 | 5.2 | 12 | Z29961:Os06g0726200 | 29 | 5.2 | 13 | AK105798:Os06g0726200 | 29 | 5.2 | 14 | AK104020:Os06g0726200 | 29 | 5.2 | 15 | AK099339:Os06g0726200 | 29 | 5.2 | 16 | AK061042:Os06g0726200 | 29 | 5.2 | 17 | AK067575:Os07g0563600 | 29 | 5.2 | 18 | Os11g0689400:Os11g0689400 | 28 | 6.8 | 19 | AK066636:Os01g0546800 | 28 | 8.9 |
|---|
>Os03g0579300:Os03g0579300 | Length = 206 Score = 265 bits (678), Expect = 3e-71 Identities = 140/187 (74%), Positives = 142/187 (75%) Frame = +1 Query: 88 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIXXX 267 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKI Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60 Query: 268 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 447 EAKQKGRHSGYGKRRGTREARLPTKI KYREAKKIDKHMY Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120 Query: 448 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 627 HDMY+KVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARRDER 180 Query: 628 LAQGPRD 648 LAQGPR+ Sbjct: 181 LAQGPRE 187
>AK102721:Os03g0337800 | Length = 208 Score = 264 bits (675), Expect = 6e-71 Identities = 139/187 (74%), Positives = 142/187 (75%) Frame = +1 Query: 88 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIXXX 267 MVSLKLQKRLA+SVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKI Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60 Query: 268 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 447 EAKQKGRHSGYGKRRGTREARLPTKI KYREAKKIDKHMY Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120 Query: 448 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 627 HDMY+KVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180 Query: 628 LAQGPRD 648 LAQGPR+ Sbjct: 181 LAQGPRE 187
>AK059309:Os03g0337800 | Length = 208 Score = 264 bits (675), Expect = 6e-71 Identities = 139/187 (74%), Positives = 142/187 (75%) Frame = +1 Query: 88 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIXXX 267 MVSLKLQKRLA+SVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKI Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60 Query: 268 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 447 EAKQKGRHSGYGKRRGTREARLPTKI KYREAKKIDKHMY Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120 Query: 448 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 627 HDMY+KVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180 Query: 628 LAQGPRD 648 LAQGPR+ Sbjct: 181 LAQGPRE 187
>AK110270: | Length = 310 Score = 196 bits (497), Expect = 2e-50 Identities = 97/158 (61%), Positives = 118/158 (74%) Frame = +1 Query: 88 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIXXX 267 MVSLKLQKRLA+SV+KCG+ K+WLDPNEV+EISMANSRQ +RKLVKDG+II+KP + Sbjct: 1 MVSLKLQKRLAASVMKCGQKKIWLDPNEVSEISMANSRQAVRKLVKDGYIIRKPPVMHSR 60 Query: 268 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 447 AK+KGRH G GKRRGTR AR+P K+ KYREAKKIDKH Y Sbjct: 61 ARVRKNLLAKRKGRHMGVGKRRGTRNARMPEKVIWIRRMRVLRRLLRKYREAKKIDKHSY 120 Query: 448 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 561 H++Y+KVKGN+FKNKRVLME I K+KA+K ++K +Q Sbjct: 121 HELYMKVKGNVFKNKRVLMEYIWKAKAQKIKDKAEQEQ 158
>D21304:Os03g0337800 | Length = 49 Score = 75.1 bits (183), Expect = 6e-14 Identities = 36/37 (97%), Positives = 37/37 (100%) Frame = +1 Query: 454 MYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF 564 MY+KVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 1 MYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQF 37
>D29721:Os03g0337800 | Length = 64 Score = 37.0 bits (84), Expect = 0.019 Identities = 21/43 (48%), Positives = 22/43 (51%) Frame = +1 Query: 520 SKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXXLAQGPRD 648 SKAEKAREKTLSDQF LAQGPR+ Sbjct: 1 SKAEKAREKTLSDQFEAKRAKSKASRERKIARREERLAQGPRE 43
>AK104982:Os03g0100200 | Length = 203 Score = 33.9 bits (76), Expect = 0.16 Identities = 24/59 (40%), Positives = 30/59 (50%) Frame = +2 Query: 110 SGSPRACLSAARARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQGPVHAEP 286 S +P AC+ +A RSG+ P ++ SP T T R SSSR P RS GP P Sbjct: 135 STTPTACVCSASGRSGTKPAATSSSPGSTPRLTAP---RPPSSSRPPTRS--GPSCRRP 188
>AK072547:Os03g0100200 | Length = 203 Score = 33.9 bits (76), Expect = 0.16 Identities = 24/59 (40%), Positives = 30/59 (50%) Frame = +2 Query: 110 SGSPRACLSAARARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQGPVHAEP 286 S +P AC+ +A RSG+ P ++ SP T T R SSSR P RS GP P Sbjct: 135 STTPTACVCSASGRSGTKPAATSSSPGSTPRLTAP---RPPSSSRPPTRS--GPSCRRP 188
>AK119848: | Length = 555 Score = 29.3 bits (64), Expect = 4.0 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Frame = +2 Query: 116 SPRACLSAARARS-----GSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQGPVHA 280 SP S +R+RS + RSP + +R+ R AS+SRSP RS P Sbjct: 83 SPAKSASPSRSRSLDREDSKRGRKKGRSPSASPSRSPAKRRRAASASRSPSRSPSRPRRG 142 Query: 281 EPTRQNRR 304 + ++RR Sbjct: 143 KSRSRSRR 150
>X56063:Os06g0726200 | Length = 199 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 64 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 111 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 112 PPASARSPRSWRR 124
>AY378172:Os06g0726200 | Length = 195 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 60 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 107 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 108 PPASARSPRSWRR 120
>Z29961:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 79 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 126 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 127 PPASARSPRSWRR 139
>AK105798:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 79 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 126 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 127 PPASARSPRSWRR 139
>AK104020:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 79 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 126 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 127 PPASARSPRSWRR 139
>AK099339:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 79 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 126 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 127 PPASARSPRSWRR 139
>AK061042:Os06g0726200 | Length = 214 Score = 28.9 bits (63), Expect = 5.2 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = +2 Query: 95 P*SCRSGSPRACLSAA---RARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQ 265 P SCR+ S C S A RAR ++ + SP PT +R SP+ +T Sbjct: 79 PPSCRARSSTRCFSTATTRRARPRTSTPTTPSSPPPTPSRA------------SPQPATP 126 Query: 266 GPVHAEPTRQNRR 304 P A R RR Sbjct: 127 PPASARSPRSWRR 139
>AK067575:Os07g0563600 | Length = 903 Score = 28.9 bits (63), Expect = 5.2 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Frame = +1 Query: 325 KRRGTREARLP---TKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKR 495 K+RGT+EA+ P T+I KYR + + H H + +M K K+ Sbjct: 157 KKRGTKEAKCPRPETRIGCPASMTIRLNTNGKYRLTEFVPNH-NHQLATASTMHMLKAKK 215 Query: 496 VLMESIHKSKAEKAREKTLSD 558 + + KA ARE + D Sbjct: 216 I------RLKARAARENLVDD 230
>Os11g0689400:Os11g0689400 | Length = 2841 Score = 28.5 bits (62), Expect = 6.8 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Frame = +2 Query: 146 ARSGSTPMRSTRSPWPTLARTFESW*RMASSSRSPKRSTQGPVH--AEPTRQNRRAAILD 319 +RS S+ RS W SW R S SRSP RS A P R+ R + D Sbjct: 1113 SRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPRPRSGFD 1172 Query: 320 MV 325 ++ Sbjct: 1173 VL 1174
>AK066636:Os01g0546800 | Length = 364 Score = 28.1 bits (61), Expect = 8.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -1 Query: 408 AEQASEHAHPPHPQNLGGKPSLPCTPA 328 A AS HPPHP GG P +P A Sbjct: 20 APSASAMHHPPHPAAGGGGPVMPYADA 46 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,360,862 Number of extensions: 506121 Number of successful extensions: 1807 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1807 Number of HSP's successfully gapped: 19 Length of query: 304 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 204 Effective length of database: 11,395,755 Effective search space: 2324734020 Effective search space used: 2324734020 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
