>LOC_Os04g36850:12004.t03306:unspliced-genomic expressed protein|
Length = 2531
Score = 139 bits (299), Expect(4) = 1e-96
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = +3 / +1
Query: 357 LQVGIGHNFQLKATGWKWKLTTCLGGDGVSHIRNKSKLNLFPGFDLRLGWKAEYVLPEIH 536
LQVGIGHNF L ATGWKWKL+TCLGGDGVS IRNKS L++FPGFDLR+GW+AEYVLPEIH
Sbjct: 1861 LQVGIGHNFHLNATGWKWKLSTCLGGDGVSQIRNKSTLSMFPGFDLRVGWRAEYVLPEIH 2040
Query: 537 G 539
G
Sbjct: 2041 G 2043
Score = 122 bits (262), Expect(4) = 1e-96
Identities = 48/55 (87%), Positives = 54/55 (98%)
Frame = +3 / +1
Query: 201 NFEFYNLEVNDFEAKVVVKPLDFDRKWKFQYKPISGDIQLLSKKIPVTKYLNLQV 365
+F+FYNLEVNDFEAKVV+KPLD++RKWKF YKPISGDIQLLSKKIPVTK+LNLQV
Sbjct: 628 SFQFYNLEVNDFEAKVVLKPLDYERKWKFHYKPISGDIQLLSKKIPVTKFLNLQV 792
Score = 80.3 bits (169), Expect(4) = 1e-96
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = +3 / +2
Query: 105 PTMLDELYHINVVPAELHFKFRKELQGLRVGLNFE 209
PT LDELY INVVPAELHFKFRKELQGLRVGLNFE
Sbjct: 140 PTTLDELYKINVVPAELHFKFRKELQGLRVGLNFE 244
Score = 79.0 bits (166), Expect(4) = 1e-96
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 540 AVGTGEPAFSMNYGRLQASIDRVEAIVTQSDRY* 641
AVGTGEPAFSMNYGRLQASIDRVEAIVTQSDRY*
Sbjct: 2181 AVGTGEPAFSMNYGRLQASIDRVEAIVTQSDRY* 2282
Score = 121 bits (258), Expect(4) = 2e-75
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = -1 / -1
Query: 544 TAP*ISGSTYSAFQPSLRSNPGNRLSFDLFLM*ETPSPPKQVVSFHFHPVAFSWKL*PMP 365
T P*ISGSTYSA QP+L+SNPGN LS DLFL+*ETPSPPK V SFHFHPVA WKL*PMP
Sbjct: 2048 TYP*ISGSTYSALQPTLKSNPGNMLSVDLFLI*ETPSPPKHVESFHFHPVALRWKL*PMP 1869
Query: 364 T 362
T
Sbjct: 1868 T 1866
Score = 79.0 bits (166), Expect(4) = 2e-75
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = -1 / -3
Query: 208 SKLRPTRRPWSSLRNLKCSSAGTTLMWYSSSSIVG 104
SKLRPTRRPWSSLRNLKCSSAGTTL+ YSSSS+VG
Sbjct: 243 SKLRPTRRPWSSLRNLKCSSAGTTLILYSSSSVVG 139
Score = 77.1 bits (162), Expect(4) = 2e-75
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = -2 / -2
Query: 363 PEG*GTL*LESSWKAAVCHR*WACTGTSTSGRSPGASQLPLPQNHSPLD 217
P * T L SSWK AV HR*WAC+GTSTS SP AS+LP PQNHSP D
Sbjct: 790 PVD*ETSLLVSSWKEAVYHR*WACSGTSTSVHSPEASELPSPQNHSPQD 644
Score = 73.5 bits (154), Expect(4) = 2e-75
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = -1 / -2
Query: 640 QYRSDWVTIASTRSMDACNRP*FILNAGSPVPTA 539
QYRSD VTIASTRS+DACNRP*FIL AGSPVPTA
Sbjct: 2281 QYRSDCVTIASTRSIDACNRP*FILKAGSPVPTA 2180
Score = 109 bits (233), Expect(4) = 6e-57
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = -3 / -3
Query: 539 PMNLRKHIFSFPTEPQIKPWKQVEF*FVSYVRNTISPQASSELPLPSSRLQLEIVTNADL 360
PMNLRKHIFS PT+PQIKPW+ E FVSY+R+TISPQ ELPLPSS +++EIVTNADL
Sbjct: 2043 PMNLRKHIFSSPTDPQIKPWEHAECRFVSYLRDTISPQTRRELPLPSSGIEMEIVTNADL 1864
Score = 73.5 bits (154), Expect(4) = 6e-57
Identities = 36/54 (66%), Positives = 37/54 (68%)
Frame = -1 / -1
Query: 364 T*RLRYFVTGIFLESSCMSPLMGLYWNFHFRSKSRGXXXXXXXXXXXSRL*NSK 203
T RLR FVTGIFLE SC+SPLMGL WNFHFRS SRG SRL*N K
Sbjct: 791 TCRLRNFVTGIFLERSCISPLMGL*WNFHFRS*SRGFRTTFASKSFTSRL*N*K 630
Score = 62.0 bits (129), Expect(4) = 6e-57
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = -3 / -1
Query: 644 GSVPI*LGHNSLDTVYGCLQSSIVHTERRFSCPNSP 537
GS+PI*L ++SL+++Y CLQS +VHTE RFSC NSP
Sbjct: 2285 GSIPI*LCYDSLNSIY*CLQSPVVHTEGRFSCSNSP 2178
Score = 42.8 bits (87), Expect(4) = 6e-57
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3 / -2
Query: 149 GRHDVDVVQLIQHRRSIPDAPV 84
GRH VD+VQL++ RR +PDAPV
Sbjct: 184 GRHHVDLVQLVERRRPVPDAPV 119
Score = 111 bits (236), Expect(4) = 2e-52
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +2 / +3
Query: 341 YKVPQPSGRHWSQFPTEGDWMEVEAHYLLGGRWCFSHKKQIKTQPVSRV*SEARLES*IC 520
+ + +GRHWSQFP++ WMEVEA Y+ GGRWC S KKQI TQ V RV* E RLES*IC
Sbjct: 1845 FLITMVTGRHWSQFPSQCHWMEVEALYVFGGRWCLSDKKQIDTQHVPRV*FEGRLES*IC 2024
Query: 521 AS*DSW 538
AS*DSW
Sbjct: 2025 AS*DSW 2042
Score = 75.3 bits (158), Expect(4) = 2e-52
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +2 / +3
Query: 209 VLQSRGE*F*GKGSCEAPGLRPEVEVPVQAHQR*HTAAFQEDSSYKVPQPSG 364
VL S GE*F*G+GS EA GL EVEVP+QAHQR*+TA+FQED+S +V Q +G
Sbjct: 636 VL*S*GE*F*GEGSSEASGL*TEVEVPLQAHQR*YTASFQEDTSNEVSQSTG 791
Score = 56.1 bits (116), Expect(4) = 2e-52
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2 / +2
Query: 539 GCWDRRTCVQYELWTIASIHRPCRGYCDPIRSVL 640
GCW+RRTC+QYEL IASI+R GY + +RSVL
Sbjct: 2180 GCWNRRTCLQYELRAIASINRSS*GYRNTVRSVL 2281
Score = 30.4 bits (60), Expect(4) = 2e-52
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 107 DDAG*AVPHQRRAGRAALQV 166
DDA AV QR AGRAALQV
Sbjct: 142 DDARRAVQDQRGAGRAALQV 201
Score = 105 bits (224), Expect(3) = 3e-31
Identities = 47/67 (70%), Positives = 54/67 (80%)
Frame = +1 / +2
Query: 340 LQSTSTFRSALVTISN*RRLDGSGSSLLAWGEMVFLT*ETNQNSTCFQGLI*GSVGKLNM 519
+ + + +RSALVTIS LDGSGSSL WGEMV L *ETN++S C QGLI*GSVG+LNM
Sbjct: 1844 ISNNNGYRSALVTISISMPLDGSGSSLRVWGEMVSLR*ETNRHSACSQGLI*GSVGELNM 2023
Query: 520 CFLRFMG 540
CFLRFMG
Sbjct: 2024 CFLRFMG 2044
Score = 46.4 bits (95), Expect(3) = 3e-31
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +1 / +1
Query: 538 GLLGQENLRSV*TMDDCKHP*TVSRLL*PNQIGTEP 645
GLL QENL SV*T DCKH * RL * +QIG +P
Sbjct: 2179 GLLEQENLPSV*TTGDCKHQ*IELRLS*HSQIGIDP 2286
Score = 29.0 bits (57), Expect(3) = 3e-31
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 304 AVTYSCFPRRFQLQSTSTFR 363
AV YS FPRR+Q +S S +R
Sbjct: 731 AVIYSFFPRRYQ*RSFSIYR 790
Score = 101 bits (215), Expect(3) = 6e-30
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -2 / -2
Query: 537 HESQEAHIQLSNRASDQTLETG*VLICFLCEKHHLPPSK**ASTSIQSPSVGNCDQCRP 361
HESQEAHIQLSNR S+QTL T *V ICFL E+HHLPP+ * ASTSIQ GNCDQCRP
Sbjct: 2041 HESQEAHIQLSNRPSNQTLGTC*VSICFLSERHHLPPNT*RASTSIQWH*DGNCDQCRP 1865
Score = 40.5 bits (82), Expect(3) = 6e-30
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -2 / -3
Query: 639 STDLIGSQ*PRHGLWMLAIVHSSY*TQVLLSQQP 538
+TDL +*P+ L MLAI SSY* QVLL QQP
Sbjct: 2280 NTDLTVLR*PQLDLLMLAIARSSY*RQVLLFQQP 2179
Score = 34.5 bits (69), Expect(3) = 6e-30
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2 / -1
Query: 177 APCGT*SAARPARR*CGTA 121
APCGT*SAARPA R* TA
Sbjct: 212 APCGT*SAARPAPR*SCTA 156
Score = 51.9 bits (107), Expect = 6e-06
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = -3 / -3
Query: 413 LPLPSSRLQLEIVTNADLKVEVLCNWNLLGKQLYVTADGXXXXXXXXXXVQGLHNYLCLK 234
+ LP +V +L +E L W LLGK+LY+TADG VQ L NYL LK
Sbjct: 840 IKLPQK*CTNNMVQ*ENL*IEKLRYWYLLGKKLYITADGLVVELPLPFIVQRLQNYLRLK 661
Query: 233 IIH 225
IIH
Sbjct: 660 IIH 652
>LOC_Os02g48560:12002.t04440:unspliced-genomic omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2,|
putative, expressed
Length = 5241
Score = 27.6 bits (54), Expect(3) = 2.3
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 833 FFFFFGETQKY 801
FFFFF ETQ+Y
Sbjct: 690 FFFFFSETQRY 722
Score = 24.4 bits (47), Expect(3) = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / +2
Query: 666 QHPGHPRRFSTDLIGSQ*PRHG 601
QH GH RR L + PRHG
Sbjct: 4265 QHHGHARRAPPLLHHAALPRHG 4330
Score = 23.1 bits (44), Expect(3) = 2.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1 / +1
Query: 193 TRRPWSSLRNLKCSSAGTT 137
T PW LR SSA TT
Sbjct: 4315 TTTPWRPLRRSAPSSASTT 4371
>LOC_Os11g07200:12011.t00612:unspliced-genomic receptor protein kinase CLAVATA1 precursor, putative, expressed|
Length = 13617
Score = 26.3 bits (51), Expect(2) = 3.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 428 GGRWCFSHKKQ 460
GGRWC S KKQ
Sbjct: 7545 GGRWCRSGKKQ 7577
Score = 23.5 bits (45), Expect(2) = 3.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 397 LDGSGSSLLAWGE 435
LDG GSS +A+G+
Sbjct: 7467 LDGQGSSAIAYGQ 7505
>LOC_Os03g31400:12003.t02736:unspliced-genomic ubiquitin conjugation factor E4 A, putative, expressed|
Length = 7118
Score = 28.6 bits (56), Expect(2) = 5.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 549 TGEPAFSMNYGRLQASIDRVEAI 617
T EPA YGRL+ S+++V A+
Sbjct: 720 TVEPAMGELYGRLRQSVEKVSAL 788
Score = 26.3 bits (51), Expect(2) = 5.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2 / +3
Query: 605 CRGYCDPIRSVLNLLG*PGCC 667
C YC P+++ L + *PG C
Sbjct: 3819 CINYCLPLKATLTVCL*PGWC 3881
>LOC_Os12g03130:12012.t00206:unspliced-genomic CDC45-related protein, putative, expressed|
Length = 2475
Score = 25.4 bits (49), Expect(2) = 6.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -1
Query: 297 ACTGTSTSGRSPGASQLP 244
+CTGTS+ R G LP
Sbjct: 1209 SCTGTSSGSRRAGIPSLP 1156
Score = 23.5 bits (45), Expect(2) = 6.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2 / -2
Query: 261 GASQLPLPQNHSP 223
G Q PLP+ H P
Sbjct: 1079 GVEQTPLPEQHQP 1041
>LOC_Os11g03430:12011.t00233:unspliced-genomic cell division control protein 45, putative, expressed|
Length = 2408
Score = 25.4 bits (49), Expect(2) = 6.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -2
Query: 297 ACTGTSTSGRSPGASQLP 244
+CTGTS+ R G LP
Sbjct: 1159 SCTGTSSGNRRAGIPSLP 1106
Score = 23.5 bits (45), Expect(2) = 6.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -2 / -3
Query: 261 GASQLPLPQNHSP 223
G Q PLP+ H P
Sbjct: 1029 GVEQTPLPEQHQP 991
>LOC_Os04g55730:12004.t05045:unspliced-genomic alpha-N-acetylglucosaminidase precursor, putative, expressed|
Length = 9134
Score = 27.2 bits (53), Expect(2) = 8.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 366 GIGHNFQLKATGWKWKLTTCL 428
GIG + K TGW +K++ CL
Sbjct: 2060 GIGSAGRRKLTGWLFKVSICL 2122
Score = 27.2 bits (53), Expect(2) = 8.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / +2
Query: 486 FDLRLGWKAEYVLPEI 533
F L LGWK VLPEI
Sbjct: 8249 FFLALGWKVPRVLPEI 8296
>LOC_Os01g72480:12001.t06536:unspliced-genomic zinc finger, C3HC4 type family protein, expressed|
Length = 2315
Score = 25.8 bits (50), Expect(2) = 8.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2 / +3
Query: 297 ACTGTSTSGRSPGASQLPLPQNHSPLD 217
A + +S+S S A +PLP P+D
Sbjct: 153 AASASSSSSSSSSAESVPLPTTTLPID 233
Score = 22.6 bits (43), Expect(2) = 8.4
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2 / +1
Query: 456 FLCEKHHLPPSK 421
FL HH PP K
Sbjct: 52 FLLSSHHTPPEK 87
>LOC_Os07g03580:12007.t00248:unspliced-genomic pathogenesis-related protein PRB1-2 precursor, putative, expressed|
Length = 724
Score = 31.3 bits (62), Expect = 9.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / +2
Query: 356 PSGRHWSQFPTEGDWMEVEAHYLLGGRWC 442
P+G+ WS G WME +A Y+ C
Sbjct: 344 PAGKAWSAADAVGLWMEEKASYVYSSNTC 430
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 318,898,151
Number of extensions: 5199879
Number of successful extensions: 17877
Number of sequences better than 10.0: 25
Length of query: 278
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 229
Effective length of database: 52,856,264
Effective search space: 12104084456
Effective search space used: 12104084456
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)