| Clone Name | FLbaf76d19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q92HA7:UVRC_RICCN UvrABC system protein C - Rickettsia conorii | 31 | 5.2 | 2 | O35381:AN32A_MOUSE Acidic leucine-rich nuclear phosphoprotein 32... | 31 | 6.9 | 3 | P50388:BGAL_SULSH Beta-galactosidase - Sulfolobus shibatae | 30 | 8.9 |
|---|
>Q92HA7:UVRC_RICCN UvrABC system protein C - Rickettsia conorii| Length = 639 Score = 31.2 bits (69), Expect = 5.2 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = +3 Query: 288 QYKPISGDIQLLSKKIPVTKYLNLQVGIGHNFQLK----ATGWKWKLTTCLGGDGVSHIR 455 Q+ I ++ L K +PV KYL + HNF +K K++ +GV R Sbjct: 536 QFHVIGKEVFTLDKNLPVMKYLQILRDEAHNFAIKNHRLGRSRAIKISRLDDIEGVGETR 595 Query: 456 NKSKLNLFPGF 488 K+ L+ F + Sbjct: 596 KKALLHYFGSY 606
>O35381:AN32A_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member A - Mus| musculus (Mouse) Length = 247 Score = 30.8 bits (68), Expect = 6.9 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Frame = +3 Query: 171 KELQGLRVGLNFEFYNLE----VNDFEAKVVVKP-LDFDRKWKFQYKPISGDIQLLSKKI 335 K ++G GL EF LE +N + P L+ +K + ISGD+++L++K Sbjct: 28 KSIEGKIEGLTDEFEELEFLSTINVGLTSISNLPKLNKLKKLELSENRISGDLEVLAEKC 87 Query: 336 PVTKYLNL 359 P K+LNL Sbjct: 88 PNLKHLNL 95
>P50388:BGAL_SULSH Beta-galactosidase - Sulfolobus shibatae| Length = 489 Score = 30.4 bits (67), Expect = 8.9 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Frame = +3 Query: 201 NFEFYNLEVNDFEAKVVVKPLDFDRKWKFQYKPISGDIQLLSKKIPVTKYLNLQVGIGHN 380 N F L D EA V+ ++D +W F I G+I S+K+ IG N Sbjct: 264 NSSFQPLTEKDVEA---VEMAEYDNRWAFFDAIIRGEIMRGSEKVVRDDLRGRLDWIGVN 320 Query: 381 FQLKATGWKW-KLTTCLGGDGVSHIRNKSKLNLFPGFDLRLGWK 509 + + K K T LGG G RN L P D GW+ Sbjct: 321 YYTRTVVKKTEKGYTSLGGYGHGCERNSVSLAGLPTSD--FGWE 362 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 142,289,861 Number of extensions: 3241076 Number of successful extensions: 6994 Number of sequences better than 10.0: 3 Number of HSP's gapped: 6992 Number of HSP's successfully gapped: 3 Length of query: 278 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 166 Effective length of database: 69,965,399 Effective search space: 11614256234 Effective search space used: 11614256234 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)