ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf76d19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ517437.1| Hordeum vulgare ORG4 mRNA, complete cds Length = 827 Score = 1425 bits (719), Expect = 0.0 Identities = 719/719 (100%) Strand = Plus / Plus Query: 100 atggaccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcact 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 atggaccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcact 151 Query: 160 tcaagttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagttctacaatc 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152 tcaagttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagttctacaatc 211 Query: 220 tagaggtgaatgattttgaggcaaaggtagttgtgaagcccctggacttcgaccggaagt 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212 tagaggtgaatgattttgaggcaaaggtagttgtgaagcccctggacttcgaccggaagt 271 Query: 280 ggaagttccagtacaagcccatcagcggtgacatacagctgctttccaagaagattccag 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggaagttccagtacaagcccatcagcggtgacatacagctgctttccaagaagattccag 331 Query: 340 ttacaaagtacctcaaccttcaggtcggcattggtcacaatttccaactgaaggcgactg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 ttacaaagtacctcaaccttcaggtcggcattggtcacaatttccaactgaaggcgactg 391 Query: 400 gatggaagtggaagctcactacttgcttggggggagatggtgtttctcacataagaaaca 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gatggaagtggaagctcactacttgcttggggggagatggtgtttctcacataagaaaca 451 Query: 460 aatcaaaactcaacctgtttccagggtttgatctgaggctcggttggaaagctgaatatg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 aatcaaaactcaacctgtttccagggtttgatctgaggctcggttggaaagctgaatatg 511 Query: 520 tgcttcctgagattcatggggctgttgggacaggagaacctgcgttcagtatgaactatg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 tgcttcctgagattcatggggctgttgggacaggagaacctgcgttcagtatgaactatg 571 Query: 580 gacgattgcaagcatccatagaccgtgtcgaggctattgtgacccaatcagatcggtact 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gacgattgcaagcatccatagaccgtgtcgaggctattgtgacccaatcagatcggtact 631 Query: 640 gaacctcctaggatgacctggatgctgttatggtcacgaagcgaaggagtccttcaactg 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 gaacctcctaggatgacctggatgctgttatggtcacgaagcgaaggagtccttcaactg 691 Query: 700 caactatctcagtaaaatccaatggttgtttactcgcgtcttttgaggattttcacccga 759 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 caactatctcagtaaaatccaatggttgtttactcgcgtcttttgaggattttcacccga 751 Query: 760 tgtacagaaatgagcaaactttattttgccagcataaaggagtatttctgagtttctcc 818 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 tgtacagaaatgagcaaactttattttgccagcataaaggagtatttctgagtttctcc 810 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 33 cctctctcgcgcccgatggcgtcgagct 60 |||||||||||||||||||||||||||| Sbjct: 25 cctctctcgcgcccgatggcgtcgagct 52
>ref|NM_001059443.1| Oryza sativa (japonica cultivar-group) Os04g0446200 (Os04g0446200) mRNA, complete cds Length = 609 Score = 636 bits (321), Expect = e-179 Identities = 480/533 (90%) Strand = Plus / Plus Query: 105 ccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcacttcaag 164 ||||||| ||| || ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 73 ccgacgacgctcgacgagctgtacaagatcaacgtggtgccggccgagctgcacttcaag 132 Query: 165 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagttctacaatctagag 224 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 133 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagttctataatcttgag 192 Query: 225 gtgaatgattttgaggcaaaggtagttgtgaagcccctggacttcgaccggaagtggaag 284 ||||||||||||||||| ||||||||| ||||||| ||||||| || |||||||||||| Sbjct: 193 gtgaatgattttgaggcgaaggtagttctgaagcctctggactatgaacggaagtggaag 252 Query: 285 ttccagtacaagcccatcagcggtgacatacagctgctttccaagaagattccagttaca 344 ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 253 ttccactacaagcccatcagcggtgatatacagcttctttccaagaagataccagtaacg 312 Query: 345 aagtacctcaaccttcaggtcggcattggtcacaatttccaactgaaggcgactggatgg 404 |||| ||||| || |||||||||||||||||||||||||| || || || ||||||||| Sbjct: 313 aagtttctcaatctacaggtcggcattggtcacaatttccatctcaatgccactggatgg 372 Query: 405 aagtggaagctcactacttgcttggggggagatggtgtttctcacataagaaacaaatca 464 |||||||||||| |||| || ||||||||||||||||| ||||| |||||||||||||| Sbjct: 373 aagtggaagctctctacgtgtttggggggagatggtgtctctcagataagaaacaaatcg 432 Query: 465 aaactcaacctgtttccagggtttgatctgaggctcggttggaaagctgaatatgtgctt 524 | ||||| | |||| |||||||||||| ||||| ||||||||| |||||||||||||||| Sbjct: 433 acactcagcatgttcccagggtttgatttgagggtcggttggagagctgaatatgtgctt 492 Query: 525 cctgagattcatggggctgttgggacaggagaacctgcgttcagtatgaactatggacga 584 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 493 cctgagattcatggggctgttggaacaggagaacctgccttcagtatgaactacgggcga 552 Query: 585 ttgcaagcatccatagaccgtgtcgaggctattgtgacccaatcagatcggta 637 ||||||||||| ||||| || || |||||||| || || || ||||||||||| Sbjct: 553 ttgcaagcatcaatagatcgagttgaggctatcgtaacacagtcagatcggta 605
>gb|DQ245970.1| Zea mays clone 93674 mRNA sequence Length = 992 Score = 565 bits (285), Expect = e-158 Identities = 468/529 (88%) Strand = Plus / Plus Query: 105 ccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcacttcaag 164 ||||||| |||||| ||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 169 ccgacgacgctggacgagctgtaccagatcaacgtagtgccggccgagctccacttcaag 228 Query: 165 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagttctacaatctagag 224 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 229 ttccgcaaggagctgcagggcctccgcgtcggcctcaacctcgagttctacaatcttgag 288 Query: 225 gtgaatgattttgaggcaaaggtagttgtgaagcccctggacttcgaccggaagtggaag 284 || ||||| |||||||||||| |||| ||||||| || || | ||| ||||| |||||| Sbjct: 289 gtcaatgactttgaggcaaagatagtactgaagcctctagattacgagcggaaatggaag 348 Query: 285 ttccagtacaagcccatcagcggtgacatacagctgctttccaagaagattccagttaca 344 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 349 ttccagtacaagcccatcagtggcgacatacagctgctttccaagaagataccagtcaca 408 Query: 345 aagtacctcaaccttcaggtcggcattggtcacaatttccaactgaaggcgactggatgg 404 |||| || || || ||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 409 aagtttctaaatctacaggttggcattggccacaattttcaactgaatgcaactggatgg 468 Query: 405 aagtggaagctcactacttgcttggggggagatggtgtttctcacataagaaacaaatca 464 ||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||| ||| Sbjct: 469 aagtggaagctttctacttgcctggggggagatggtgtgtctcagataagaaacaagtca 528 Query: 465 aaactcaacctgtttccagggtttgatctgaggctcggttggaaagctgaatatgtgctt 524 ||||||| | |||| |||||||||||| ||||| | || |||||||| || ||||||||| Sbjct: 529 aaactcagcttgttcccagggtttgatttgaggattggatggaaagcagagtatgtgctt 588 Query: 525 cctgagattcatggggctgttgggacaggagaacctgcgttcagtatgaactatggacga 584 ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 589 cctgagattcatggggctgttggcacaggagaaccagccttcagtatgaactatggaagg 648 Query: 585 ttgcaagcatccatagaccgtgtcgaggctattgtgacccaatcagatc 633 ||||| ||||| ||||| || ||||||||||| || || || ||||||| Sbjct: 649 ttgcatgcatcgatagatcgggtcgaggctatcgttactcagtcagatc 697
>emb|CR855182.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140O07, complete sequence Length = 78789 Score = 222 bits (112), Expect = 2e-54 Identities = 163/180 (90%) Strand = Plus / Plus Query: 360 caggtcggcattggtcacaatttccaactgaaggcgactggatggaagtggaagctcact 419 |||||||||||||||||||||||||| || || || ||||||||||||||||||||| || Sbjct: 56090 caggtcggcattggtcacaatttccatctcaatgccactggatggaagtggaagctctct 56149 Query: 420 acttgcttggggggagatggtgtttctcacataagaaacaaatcaaaactcaacctgttt 479 || || ||||||||||||||||| ||||| |||||||||||||| | ||||| | |||| Sbjct: 56150 acgtgtttggggggagatggtgtctctcagataagaaacaaatcgacactcagcatgttc 56209 Query: 480 ccagggtttgatctgaggctcggttggaaagctgaatatgtgcttcctgagattcatggg 539 |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 56210 ccagggtttgatttgagggtcggttggagagctgaatatgtgcttcctgagattcatggg 56269 Score = 168 bits (85), Expect = 2e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 208 agttctacaatctagaggtgaatgattttgaggcaaaggtagttgtgaagcccctggact 267 ||||||| ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 54861 agttctataatcttgaggtgaatgattttgaggcgaaggtagttctgaagcctctggact 54920 Query: 268 tcgaccggaagtggaagttccagtacaagcccatcagcggtgacatacagctgctttcca 327 || ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 54921 atgaacggaagtggaagttccactacaagcccatcagcggtgatatacagcttctttcca 54980 Query: 328 agaagattccagt 340 ||||||| ||||| Sbjct: 54981 agaagataccagt 54993 Score = 161 bits (81), Expect = 5e-36 Identities = 99/105 (94%) Strand = Plus / Plus Query: 105 ccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcacttcaag 164 ||||||| ||| || ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 54366 ccgacgacgctcgacgagctgtacaagatcaacgtggtgccggccgagctgcacttcaag 54425 Query: 165 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 209 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54426 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 54470 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 538 gggctgttgggacaggagaacctgcgttcagtatgaactatggacgattgcaagcatcca 597 |||||||||| |||||||||||||| |||||||||||||| || |||||||||||||| | Sbjct: 56405 gggctgttggaacaggagaacctgccttcagtatgaactacgggcgattgcaagcatcaa 56464 Query: 598 tagaccgtgtcgaggctattgtgacccaatcagatcggta 637 |||| || || |||||||| || || || ||||||||||| Sbjct: 56465 tagatcgagttgaggctatcgtaacacagtcagatcggta 56504
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 222 bits (112), Expect = 2e-54 Identities = 163/180 (90%) Strand = Plus / Plus Query: 360 caggtcggcattggtcacaatttccaactgaaggcgactggatggaagtggaagctcact 419 |||||||||||||||||||||||||| || || || ||||||||||||||||||||| || Sbjct: 22221367 caggtcggcattggtcacaatttccatctcaatgccactggatggaagtggaagctctct 22221426 Query: 420 acttgcttggggggagatggtgtttctcacataagaaacaaatcaaaactcaacctgttt 479 || || ||||||||||||||||| ||||| |||||||||||||| | ||||| | |||| Sbjct: 22221427 acgtgtttggggggagatggtgtctctcagataagaaacaaatcgacactcagcatgttc 22221486 Query: 480 ccagggtttgatctgaggctcggttggaaagctgaatatgtgcttcctgagattcatggg 539 |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 22221487 ccagggtttgatttgagggtcggttggagagctgaatatgtgcttcctgagattcatggg 22221546 Score = 168 bits (85), Expect = 2e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 208 agttctacaatctagaggtgaatgattttgaggcaaaggtagttgtgaagcccctggact 267 ||||||| ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 22220138 agttctataatcttgaggtgaatgattttgaggcgaaggtagttctgaagcctctggact 22220197 Query: 268 tcgaccggaagtggaagttccagtacaagcccatcagcggtgacatacagctgctttcca 327 || ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 22220198 atgaacggaagtggaagttccactacaagcccatcagcggtgatatacagcttctttcca 22220257 Query: 328 agaagattccagt 340 ||||||| ||||| Sbjct: 22220258 agaagataccagt 22220270 Score = 161 bits (81), Expect = 5e-36 Identities = 99/105 (94%) Strand = Plus / Plus Query: 105 ccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcacttcaag 164 ||||||| ||| || ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 22219643 ccgacgacgctcgacgagctgtacaagatcaacgtggtgccggccgagctgcacttcaag 22219702 Query: 165 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 209 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22219703 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 22219747 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 538 gggctgttgggacaggagaacctgcgttcagtatgaactatggacgattgcaagcatcca 597 |||||||||| |||||||||||||| |||||||||||||| || |||||||||||||| | Sbjct: 22221682 gggctgttggaacaggagaacctgccttcagtatgaactacgggcgattgcaagcatcaa 22221741 Query: 598 tagaccgtgtcgaggctattgtgacccaatcagatcggta 637 |||| || || |||||||| || || || ||||||||||| Sbjct: 22221742 tagatcgagttgaggctatcgtaacacagtcagatcggta 22221781
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 222 bits (112), Expect = 2e-54 Identities = 163/180 (90%) Strand = Plus / Plus Query: 360 caggtcggcattggtcacaatttccaactgaaggcgactggatggaagtggaagctcact 419 |||||||||||||||||||||||||| || || || ||||||||||||||||||||| || Sbjct: 91228 caggtcggcattggtcacaatttccatctcaatgccactggatggaagtggaagctctct 91287 Query: 420 acttgcttggggggagatggtgtttctcacataagaaacaaatcaaaactcaacctgttt 479 || || ||||||||||||||||| ||||| |||||||||||||| | ||||| | |||| Sbjct: 91288 acgtgtttggggggagatggtgtctctcagataagaaacaaatcgacactcagcatgttc 91347 Query: 480 ccagggtttgatctgaggctcggttggaaagctgaatatgtgcttcctgagattcatggg 539 |||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 91348 ccagggtttgatttgagggtcggttggagagctgaatatgtgcttcctgagattcatggg 91407 Score = 168 bits (85), Expect = 2e-38 Identities = 121/133 (90%) Strand = Plus / Plus Query: 208 agttctacaatctagaggtgaatgattttgaggcaaaggtagttgtgaagcccctggact 267 ||||||| ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct: 89999 agttctataatcttgaggtgaatgattttgaggcgaaggtagttctgaagcctctggact 90058 Query: 268 tcgaccggaagtggaagttccagtacaagcccatcagcggtgacatacagctgctttcca 327 || ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 90059 atgaacggaagtggaagttccactacaagcccatcagcggtgatatacagcttctttcca 90118 Query: 328 agaagattccagt 340 ||||||| ||||| Sbjct: 90119 agaagataccagt 90131 Score = 161 bits (81), Expect = 5e-36 Identities = 99/105 (94%) Strand = Plus / Plus Query: 105 ccgacgatgctggatgagctgtaccacatcaacgtcgtgccggccgagctgcacttcaag 164 ||||||| ||| || ||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 89504 ccgacgacgctcgacgagctgtacaagatcaacgtggtgccggccgagctgcacttcaag 89563 Query: 165 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 209 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89564 ttccgcaaggagctccagggcctccgcgtcggcctcaacttcgag 89608 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Plus Query: 538 gggctgttgggacaggagaacctgcgttcagtatgaactatggacgattgcaagcatcca 597 |||||||||| |||||||||||||| |||||||||||||| || |||||||||||||| | Sbjct: 91543 gggctgttggaacaggagaacctgccttcagtatgaactacgggcgattgcaagcatcaa 91602 Query: 598 tagaccgtgtcgaggctattgtgacccaatcagatcggta 637 |||| || || |||||||| || || || ||||||||||| Sbjct: 91603 tagatcgagttgaggctatcgtaacacagtcagatcggta 91642
>gb|AY111293.1| Zea mays CL10140_1 mRNA sequence Length = 548 Score = 210 bits (106), Expect = 6e-51 Identities = 187/216 (86%) Strand = Plus / Minus Query: 366 ggcattggtcacaatttccaactgaaggcgactggatggaagtggaagctcactacttgc 425 |||||||| | |||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 546 ggcattggccgcaattttcaactgaatgcaactggatggaagtggaagctttctacttgc 487 Query: 426 ttggggggagatggtgtttctcacataagaaacaaatcaaaactcaacctgtttccaggg 485 | ||||||||| ||||| ||||||||||| |||||||||| | |||| |||||| Sbjct: 486 ctnnnnnnagatggtgtgtctcagataagaaacaagtcaaaactcagcttgttcccaggg 427 Query: 486 tttgatctgaggctcggttggaaagctgaatatgtgcttcctgagattcatggggctgtt 545 |||||| ||||| | || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 426 tttgatttgaggattggatggaaagcagagtatgtgcttcctgagattcatggggctgtt 367 Query: 546 gggacaggagaacctgcgttcagtatgaactatgga 581 || ||||||||||| || |||||||||||||||||| Sbjct: 366 ggcacaggagaaccagccttcagtatgaactatgga 331
>ref|NM_126615.3| Arabidopsis thaliana ORG4 (OBP3-RESPONSIVE GENE 4) (ORG4) mRNA, complete cds Length = 1027 Score = 44.1 bits (22), Expect = 0.80 Identities = 43/50 (86%) Strand = Plus / Plus Query: 162 aagttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagtt 211 ||||||||||| ||||| || ||||| ||||||||| |||| ||||||| Sbjct: 111 aagttccgcaaagagcttcaaggccttcgcgtcggcgtcaatctcgagtt 160
>dbj|AK154966.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113D21 product:glutaredoxin 1 (thioltransferase), full insert sequence Length = 4231 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 acatacagctgctttccaagaa 331 |||||||||||||||||||||| Sbjct: 3917 acatacagctgctttccaagaa 3938
>gb|AY114726.1| Arabidopsis thaliana unknown protein (At2g06010) mRNA, complete cds Length = 622 Score = 44.1 bits (22), Expect = 0.80 Identities = 43/50 (86%) Strand = Plus / Plus Query: 162 aagttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagtt 211 ||||||||||| ||||| || ||||| ||||||||| |||| ||||||| Sbjct: 88 aagttccgcaaagagcttcaaggccttcgcgtcggcgtcaatctcgagtt 137
>gb|AY072356.1| Arabidopsis thaliana unknown protein (At2g06010) mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.80 Identities = 43/50 (86%) Strand = Plus / Plus Query: 162 aagttccgcaaggagctccagggcctccgcgtcggcctcaacttcgagtt 211 ||||||||||| ||||| || ||||| ||||||||| |||| ||||||| Sbjct: 112 aagttccgcaaagagcttcaaggccttcgcgtcggcgtcaatctcgagtt 161
>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence Length = 210995 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 acatacagctgctttccaagaa 331 |||||||||||||||||||||| Sbjct: 128680 acatacagctgctttccaagaa 128701
>emb|AL158111.5|CNS01RGL Human chromosome 14 DNA sequence BAC R-106G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172755 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tttccaagaagattccagttac 343 |||||||||||||||||||||| Sbjct: 133678 tttccaagaagattccagttac 133657
>emb|AL133449.5|CNS01DV3 Human chromosome 14 DNA sequence BAC R-111J13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 148439 Score = 44.1 bits (22), Expect = 0.80 Identities = 22/22 (100%) Strand = Plus / Minus Query: 322 tttccaagaagattccagttac 343 |||||||||||||||||||||| Sbjct: 46505 tttccaagaagattccagttac 46484
>ref|XM_001090380.1| PREDICTED: Macaca mulatta similar to COP9 signalosome complex subunit 8 (Signalosome subunit 8) (SGN8) (JAB1-containing signalosome subunit 8) (COP9 homolog) (hCOP9) (LOC702097), mRNA Length = 3061 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tacagctgctttccaagaaga 333 ||||||||||||||||||||| Sbjct: 1025 tacagctgctttccaagaaga 1045
>emb|AL672047.10| Mouse DNA sequence from clone RP23-316B4 on chromosome X, complete sequence Length = 183697 Score = 42.1 bits (21), Expect = 3.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 cagctgctttccaagaagattccag 339 ||||||||||||||||| ||||||| Sbjct: 163598 cagctgctttccaagaacattccag 163574
>gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ve013, complete sequence Length = 106716 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 162 aagttccgcaaggagctccagggcctccgcgtcggcctcaa 202 ||||||||||| ||||| || ||||| ||||||||| |||| Sbjct: 104696 aagttccgcaaagagcttcaaggccttcgcgtcggcgtcaa 104656
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 42.1 bits (21), Expect = 3.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 162 aagttccgcaaggagctccagggcctccgcgtcggcctcaa 202 ||||||||||| ||||| || ||||| ||||||||| |||| Sbjct: 120841 aagttccgcaaagagcttcaaggccttcgcgtcggcgtcaa 120881
>gb|AY129332.1| Mycobacteriophage Bxz2, complete genome Length = 50913 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ctccgcgtcggcctcaacttc 206 ||||||||||||||||||||| Sbjct: 38170 ctccgcgtcggcctcaacttc 38150
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ctgtttccagggtttgatctg 494 ||||||||||||||||||||| Sbjct: 3343255 ctgtttccagggtttgatctg 3343275
>emb|AL672170.11| Mouse DNA sequence from clone RP23-435C17 on chromosome X, complete sequence Length = 205023 Score = 42.1 bits (21), Expect = 3.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 764 cagaaatgagcaaactttatt 784 ||||||||||||||||||||| Sbjct: 197341 cagaaatgagcaaactttatt 197361 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 138,989,971 Number of extensions: 8026793 Number of successful extensions: 168311 Number of sequences better than 10.0: 21 Number of HSP's gapped: 168310 Number of HSP's successfully gapped: 31 Length of query: 835 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 813 Effective length of database: 18,508,616,841 Effective search space: 15047505491733 Effective search space used: 15047505491733 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
