ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063220:Os02g0126600 181 5e-46
2AK069777:Os04g0601400 34 0.12
3AK110592: 29 3.0
4AK111994:Os05g0593800 29 3.0
5AK111911:Os05g0593800 29 3.0
6Os06g0502800:Os06g0502800 28 8.8

>AK063220:Os02g0126600 |
          Length = 163
 Score =  181 bits (459), Expect = 5e-46
 Identities = 86/154 (55%), Positives = 118/154 (76%)
 Frame = +2

Query: 71  VPGLGAVTTGQVYDRHFKNKDTRTFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKWY 250
           +PG  ++ TGQVYD++FK+K T +FE FH+AYVEFCK FNTVLPGQDFDTP LE I+K+Y
Sbjct: 10  LPGWSSIPTGQVYDQYFKDKKTDSFEAFHVAYVEFCKDFNTVLPGQDFDTPSLEKIQKFY 69

Query: 251 EDTWEPLQKDDEKKKMFIEYMQEKVTEAKVEDNLFXXXXXXXXXXXXXXKKSGESIPQVK 430
           +DTW+ + +D EKKK F++Y+++ V EA V+D+LF              K++G+SIPQ+K
Sbjct: 70  DDTWKLINEDQEKKKAFMDYIRDNVKEAAVDDSLFIMAGLAAPAGAIVLKRTGQSIPQLK 129

Query: 431 KFKVHLIPNVVFVPLCTLVAIMGATAVQMSKKSK 532
             ++ L+PNV+FVPL TL AIMGATAVQM ++S+
Sbjct: 130 --RLDLLPNVLFVPLFTLAAIMGATAVQMKQRSR 161



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>AK069777:Os04g0601400 |
          Length = 172

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
 Frame = +2

Query: 95  TGQVYDRHFKNKDTR-----TFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKW---Y 250
           T +V+DR  ++   R     TFEE ++A +      N  LPG  +D P  E ++     Y
Sbjct: 26  TDKVFDRLTEDTKKREQEALTFEEVYIAVLCVYNDINKYLPGPHYDPPSKEKLKAMMNEY 85

Query: 251 EDTWEPLQKDDEKKKMFIEYMQEKVTEAKVEDNL-FXXXXXXXXXXXXXXKKSGESIPQV 427
           +   + L   +E    F E++++   E+    +                 K++ E +P V
Sbjct: 86  DINLDGLLDREE----FAEFIRKLTAESLCAISFKLLVTLVAAPALALATKRATEGVPGV 141

Query: 428 KKFKVHLIPNVVFVPLCTLVAIMGATAVQ 514
            +  V  +PN ++  + TL  +M   + +
Sbjct: 142 GRV-VRKVPNSIYASVITLGVVMAQKSTE 169



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>AK110592: |
          Length = 371

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +2

Query: 77  GLGAVTTGQVYDRHFKNKDTRTFEEFHLAYV-EFCKYFNTVLPGQDFDTPDLEVIRKWYE 253
           GL A T  Q YDR  + K T   E     +  EF  Y N     +  D PD   +RK + 
Sbjct: 218 GLKAATKKQKYDRIMEKKMTTPTEVLCRGFPNEFAIYLNYTRSLRFDDKPDYSYLRKIFR 277

Query: 254 D 256
           D
Sbjct: 278 D 278



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>AK111994:Os05g0593800 |
          Length = 473

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +2

Query: 77  GLGAVTTGQVYDRHFKNKDTRTFEEFHLAY-VEFCKYFNTVLPGQDFDTPDLEVIRKWYE 253
           GL A    Q Y++  + K   + E     Y  EF  YF+     +  D+PD + +++ + 
Sbjct: 215 GLKAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFR 274

Query: 254 DTW--EPLQKDDEKKKMFIEYMQEKVTEA 334
           D +  E  Q D       ++Y Q ++T A
Sbjct: 275 DLFIREGFQFDYVFDWTILKYQQSQMTSA 303



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>AK111911:Os05g0593800 |
          Length = 473

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +2

Query: 77  GLGAVTTGQVYDRHFKNKDTRTFEEFHLAY-VEFCKYFNTVLPGQDFDTPDLEVIRKWYE 253
           GL A    Q Y++  + K   + E     Y  EF  YF+     +  D+PD + +++ + 
Sbjct: 215 GLKAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFR 274

Query: 254 DTW--EPLQKDDEKKKMFIEYMQEKVTEA 334
           D +  E  Q D       ++Y Q ++T A
Sbjct: 275 DLFIREGFQFDYVFDWTILKYQQSQMTSA 303



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>Os06g0502800:Os06g0502800 |
          Length = 1664

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +3

Query: 243 NGMRIHGNLCKKTMKRRR-CSLSICRKRSLRPKLKTT----SSSWPAW 371
           +G+ +H + CK+    ++ C L   RK  LRPKLKT+    +SS   W
Sbjct: 772 HGVEMHCSYCKEPGHNKKGCPL---RKAGLRPKLKTSRIPAASSTEEW 816


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,281,231
Number of extensions: 434417
Number of successful extensions: 1004
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1002
Number of HSP's successfully gapped: 6
Length of query: 251
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 153
Effective length of database: 11,475,837
Effective search space: 1755803061
Effective search space used: 1755803061
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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