| Clone Name | FLbaf76d18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063220:Os02g0126600 | 181 | 5e-46 | 2 | AK069777:Os04g0601400 | 34 | 0.12 | 3 | AK110592: | 29 | 3.0 | 4 | AK111994:Os05g0593800 | 29 | 3.0 | 5 | AK111911:Os05g0593800 | 29 | 3.0 | 6 | Os06g0502800:Os06g0502800 | 28 | 8.8 |
|---|
>AK063220:Os02g0126600 | Length = 163 Score = 181 bits (459), Expect = 5e-46 Identities = 86/154 (55%), Positives = 118/154 (76%) Frame = +2 Query: 71 VPGLGAVTTGQVYDRHFKNKDTRTFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKWY 250 +PG ++ TGQVYD++FK+K T +FE FH+AYVEFCK FNTVLPGQDFDTP LE I+K+Y Sbjct: 10 LPGWSSIPTGQVYDQYFKDKKTDSFEAFHVAYVEFCKDFNTVLPGQDFDTPSLEKIQKFY 69 Query: 251 EDTWEPLQKDDEKKKMFIEYMQEKVTEAKVEDNLFXXXXXXXXXXXXXXKKSGESIPQVK 430 +DTW+ + +D EKKK F++Y+++ V EA V+D+LF K++G+SIPQ+K Sbjct: 70 DDTWKLINEDQEKKKAFMDYIRDNVKEAAVDDSLFIMAGLAAPAGAIVLKRTGQSIPQLK 129 Query: 431 KFKVHLIPNVVFVPLCTLVAIMGATAVQMSKKSK 532 ++ L+PNV+FVPL TL AIMGATAVQM ++S+ Sbjct: 130 --RLDLLPNVLFVPLFTLAAIMGATAVQMKQRSR 161
>AK069777:Os04g0601400 | Length = 172 Score = 33.9 bits (76), Expect = 0.12 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%) Frame = +2 Query: 95 TGQVYDRHFKNKDTR-----TFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKW---Y 250 T +V+DR ++ R TFEE ++A + N LPG +D P E ++ Y Sbjct: 26 TDKVFDRLTEDTKKREQEALTFEEVYIAVLCVYNDINKYLPGPHYDPPSKEKLKAMMNEY 85 Query: 251 EDTWEPLQKDDEKKKMFIEYMQEKVTEAKVEDNL-FXXXXXXXXXXXXXXKKSGESIPQV 427 + + L +E F E++++ E+ + K++ E +P V Sbjct: 86 DINLDGLLDREE----FAEFIRKLTAESLCAISFKLLVTLVAAPALALATKRATEGVPGV 141 Query: 428 KKFKVHLIPNVVFVPLCTLVAIMGATAVQ 514 + V +PN ++ + TL +M + + Sbjct: 142 GRV-VRKVPNSIYASVITLGVVMAQKSTE 169
>AK110592: | Length = 371 Score = 29.3 bits (64), Expect = 3.0 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +2 Query: 77 GLGAVTTGQVYDRHFKNKDTRTFEEFHLAYV-EFCKYFNTVLPGQDFDTPDLEVIRKWYE 253 GL A T Q YDR + K T E + EF Y N + D PD +RK + Sbjct: 218 GLKAATKKQKYDRIMEKKMTTPTEVLCRGFPNEFAIYLNYTRSLRFDDKPDYSYLRKIFR 277 Query: 254 D 256 D Sbjct: 278 D 278
>AK111994:Os05g0593800 | Length = 473 Score = 29.3 bits (64), Expect = 3.0 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 77 GLGAVTTGQVYDRHFKNKDTRTFEEFHLAY-VEFCKYFNTVLPGQDFDTPDLEVIRKWYE 253 GL A Q Y++ + K + E Y EF YF+ + D+PD + +++ + Sbjct: 215 GLKAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFR 274 Query: 254 DTW--EPLQKDDEKKKMFIEYMQEKVTEA 334 D + E Q D ++Y Q ++T A Sbjct: 275 DLFIREGFQFDYVFDWTILKYQQSQMTSA 303
>AK111911:Os05g0593800 | Length = 473 Score = 29.3 bits (64), Expect = 3.0 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +2 Query: 77 GLGAVTTGQVYDRHFKNKDTRTFEEFHLAY-VEFCKYFNTVLPGQDFDTPDLEVIRKWYE 253 GL A Q Y++ + K + E Y EF YF+ + D+PD + +++ + Sbjct: 215 GLKAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFR 274 Query: 254 DTW--EPLQKDDEKKKMFIEYMQEKVTEA 334 D + E Q D ++Y Q ++T A Sbjct: 275 DLFIREGFQFDYVFDWTILKYQQSQMTSA 303
>Os06g0502800:Os06g0502800 | Length = 1664 Score = 27.7 bits (60), Expect = 8.8 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Frame = +3 Query: 243 NGMRIHGNLCKKTMKRRR-CSLSICRKRSLRPKLKTT----SSSWPAW 371 +G+ +H + CK+ ++ C L RK LRPKLKT+ +SS W Sbjct: 772 HGVEMHCSYCKEPGHNKKGCPL---RKAGLRPKLKTSRIPAASSTEEW 816 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,281,231 Number of extensions: 434417 Number of successful extensions: 1004 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1002 Number of HSP's successfully gapped: 6 Length of query: 251 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 153 Effective length of database: 11,475,837 Effective search space: 1755803061 Effective search space used: 1755803061 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)