ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf76d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9STD3:CALR_CHLRE Calreticulin precursor - Chlamydomonas reinhar... 34 0.69
2O67499:Y1545_AQUAE Uncharacterized protein aq_1545 - Aquifex aeo... 33 1.2
3P21076:VB18_VACCC Ankyrin repeat protein B18 - Vaccinia virus (s... 32 3.4
4P33824:VB18_VARV Ankyrin repeat protein B18 - Variola virus 31 4.5
5Q9USP6:CLC1_SCHPO Clathrin light chain - Schizosaccharomyces pom... 31 4.5
6Q8KA15:PRIA_BUCAP Primosomal protein N' - Buchnera aphidicola su... 30 10.0

>Q9STD3:CALR_CHLRE Calreticulin precursor - Chlamydomonas reinhardtii|
          Length = 420
 Score = 33.9 bits (76), Expect = 0.69
 Identities = 27/79 (34%), Positives = 41/79 (51%)
 Frame = +2

Query: 110 DRHFKNKDTRTFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKWYEDTWEPLQKDDEK 289
           D+ +  KD + F  F L  V+    F+ +L      T DLE  +K+ EDTW   +  DE+
Sbjct: 307 DKLYNFKDLK-FVGFELWQVKSGSIFDNILV-----TDDLEAAKKFAEDTWG--KHKDEE 358

Query: 290 KKMFIEYMQEKVTEAKVED 346
           K MF +  +E+  E K +D
Sbjct: 359 KAMFDKVKKEE-DEKKAKD 376



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>O67499:Y1545_AQUAE Uncharacterized protein aq_1545 - Aquifex aeolicus|
          Length = 477

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
 Frame = +2

Query: 137 RTFEEFHLAYVEFCKYFNTVLPGQ------DFDTPDLEVIRKWYEDTWEPLQKDDEKKKM 298
           RTF ++ + ++E   YF  VL  Q      D+    L+++  + + T+E + +   K+K 
Sbjct: 91  RTFIQYFMEFLEKHPYFEDVLEPQNLFGNWDYIRYKLKIL--FPQLTFEEIDRFKFKRKE 148

Query: 299 FIEYMQEKVTEAK--VEDNL 352
           FI Y++EK+ E +  +ED L
Sbjct: 149 FINYVKEKLGEPEELIEDKL 168



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>P21076:VB18_VACCC Ankyrin repeat protein B18 - Vaccinia virus (strain Copenhagen)|
           (VACV)
          Length = 574

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 107 YDRHFKNKDTRTFEEFHLAYVEFCKY 184
           YDRH KN+D++T+      Y+ F KY
Sbjct: 428 YDRHVKNRDSKTYRYAFSKYMSFDKY 453



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>P33824:VB18_VARV Ankyrin repeat protein B18 - Variola virus|
          Length = 574

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 107 YDRHFKNKDTRTFEEFHLAYVEFCKYFNTVLPGQDFDTPDLEVIRKWYEDT 259
           YDRH +N+D++T+      Y+ F KY +              +I K YE+T
Sbjct: 428 YDRHVQNRDSKTYRYTFSKYISFDKYDS--------------IITKCYEET 464



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>Q9USP6:CLC1_SCHPO Clathrin light chain - Schizosaccharomyces pombe (Fission yeast)|
          Length = 229

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 194 VLPGQDFDTPDLEVIRKWYEDTWEPLQKDDEKKKMFIEYMQEKVTEA 334
           V P +D ++ D E +RKW ED  + +Q+ DE  K   E   EK  +A
Sbjct: 96  VHPPED-ESGDPEPVRKWKEDQMKRIQERDESSKKLRESNIEKARKA 141



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>Q8KA15:PRIA_BUCAP Primosomal protein N' - Buchnera aphidicola subsp. Schizaphis|
           graminum
          Length = 720

 Score = 30.0 bits (66), Expect = 10.0
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
 Frame = -2

Query: 327 VTFSCIYSMNIFFFSSSFCRGSHVSSYHFLITSRSGVSK---------SWPGNTVLKYLQ 175
           V F  + +++ +FFS  FC   H   ++F + + +G +K         S+P N  L  L 
Sbjct: 540 VRFIALTNVDHYFFSFHFCSIEHFLQFYFNLINLTGENKKLLKIFIQTSYPNNKFLLNLC 599

Query: 174 NSTY 163
           +S Y
Sbjct: 600 SSDY 603


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 126,099,221
Number of extensions: 2631028
Number of successful extensions: 6480
Number of sequences better than 10.0: 6
Number of HSP's gapped: 6476
Number of HSP's successfully gapped: 6
Length of query: 251
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 140
Effective length of database: 70,239,694
Effective search space: 9833557160
Effective search space used: 9833557160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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