ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf72l22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126M16, full insert sequence Length = 1353 Score = 729 bits (368), Expect = 0.0 Identities = 719/836 (86%) Strand = Plus / Plus Query: 180 cggcgctcgcgccggtggcctccgcggtgcccttcatcgtcctgcacgggatcggggacc 239 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 175 cggcgctcgtcccggtggcctccgccgtgcccttcatcgtcctgcacgggatcggcgacc 234 Query: 240 agtgcgggaacaacgggatcgcctccttcaccgacgagctcgcggagtggtcgggatcca 299 |||||| |||| ||||| || ||||||||||| ||| | ||| ||||| || |||| Sbjct: 235 agtgcgagaacggtgggatggcgtccttcaccgaaatgcttggggaatggtccggctcca 294 Query: 300 agggatactgcatagaaattgggagaggatcatgggattcctggttaatgccacttcaag 359 ||||||||||||| |||||||| |||||| ||||||| || ||| | ||||||||||||| Sbjct: 295 agggatactgcattgaaattggaagaggagcatgggactcttggctgatgccacttcaag 354 Query: 360 atcaggcaaatgtggtttgcaagaaggtaaaggaaatggaagagcttcgtgaaggttaca 419 | |||||| | |||||||||||||| ||| ||||| |||| || ||| ||||||||| Sbjct: 355 agcaggcagacactgtttgcaagaaggtgaagaaaatgaaagaactccgtaaaggttaca 414 Query: 420 gcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtactgtgatg 479 ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 415 gcatagttggcctttctcaggggaacttaattggtcgggcagtaattgagtactgcgatg 474 Query: 480 gtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtactgcttcag 539 |||||||||||||||||||||||||||| ||||| || ||||| |||||||| || |||| Sbjct: 475 gtggaccaccggtaaagaatttcatctcgattggtggtcctcatgctggtacggcatcag 534 Query: 540 tgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaactggaga 599 | |||||||| |||||||| || |||| |||||| |||||| |||||| || |||||| Sbjct: 535 taccactttgcggttctggcatcgtttgtgttcttattgatgctctgattaaattggaga 594 Query: 600 tatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagattcccactg 659 |||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 595 tatattcaaactatgtacaggcacaccttgctcctagtggttacctaaagatacccactg 654 Query: 660 atatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaa 719 |||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 655 atatgacagattatttgaagggttgcaagtttcttccaaagcttaacaatgagataccaa 714 Query: 720 gtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggtactgatca 779 |||||||||| ||| |||||| ||||||| |||||| |||| || | ||| |||| | Sbjct: 715 gtgaaagaaatgctacgtataaacaaagattcagcagcctggaaaatctagtattgatta 774 Query: 780 tgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattatcctg 839 ||||||| ||||||||||| || ||||| |||||||| |||||||| || || ||||| | Sbjct: 775 tgtttgaggacgacgcagtgttaataccccgggaaacggcatggttcgggtactatcccg 834 Query: 840 atggcgcctttaatcctgtgctgcctcctcaggagacaaagctatatactgaagactgga 899 |||||||||| | ||| |||| ||| ||||| |||||||| | || || || ||||||| Sbjct: 835 atggcgccttcagtccagtgcagccacctcaaaagacaaagttgtacacggaggactgga 894 Query: 900 tcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgccaggaggtc 959 ||||||||| | ||||||| ||| |||||||||||||||| || || ||||||||||||| Sbjct: 895 tcggcttgaaggctttggaggaggctgggcgtgttaagttcgtatcagtgccaggaggtc 954 Query: 960 acctccgcatatcaaggagcgacatgaagaagtacatagtgccttatttgacaccg 1015 |||| |||| || || || |||| |||||||||||||||||| || |||| |||| Sbjct: 955 acctgagcatctccagaagtgacacgaagaagtacatagtgccatacttgaaaccg 1010
>ref|NM_001071929.1| Oryza sativa (japonica cultivar-group) Os10g0563000 (Os10g0563000) mRNA, complete cds Length = 1240 Score = 692 bits (349), Expect = 0.0 Identities = 670/777 (86%) Strand = Plus / Plus Query: 180 cggcgctcgcgccggtggcctccgcggtgcccttcatcgtcctgcacgggatcggggacc 239 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 174 cggcgctcgtcccggtggcctccgccgtgcccttcatcgtcctgcacgggatcggcgacc 233 Query: 240 agtgcgggaacaacgggatcgcctccttcaccgacgagctcgcggagtggtcgggatcca 299 |||||| |||| ||||| || ||||||||||| ||| | ||| ||||| || |||| Sbjct: 234 agtgcgagaacggtgggatggcgtccttcaccgaaatgcttggggaatggtccggctcca 293 Query: 300 agggatactgcatagaaattgggagaggatcatgggattcctggttaatgccacttcaag 359 ||||||||||||| |||||||| |||||| ||||||| || ||| | ||||||||||||| Sbjct: 294 agggatactgcattgaaattggaagaggagcatgggactcttggctgatgccacttcaag 353 Query: 360 atcaggcaaatgtggtttgcaagaaggtaaaggaaatggaagagcttcgtgaaggttaca 419 | |||||| | |||||||||||||| ||| ||||| |||| || ||| ||||||||| Sbjct: 354 agcaggcagacactgtttgcaagaaggtgaagaaaatgaaagaactccgtaaaggttaca 413 Query: 420 gcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtactgtgatg 479 ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 414 gcatagttggcctttctcaggggaacttaattggtcgggcagtaattgagtactgcgatg 473 Query: 480 gtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtactgcttcag 539 |||||||||||||||||||||||||||| ||||| || ||||| |||||||| || |||| Sbjct: 474 gtggaccaccggtaaagaatttcatctcgattggtggtcctcatgctggtacggcatcag 533 Query: 540 tgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaactggaga 599 | |||||||| |||||||| || |||| |||||| |||||| |||||| || |||||| Sbjct: 534 taccactttgcggttctggcatcgtttgtgttcttattgatgctctgattaaattggaga 593 Query: 600 tatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagattcccactg 659 |||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 594 tatattcaaactatgtacaggcacaccttgctcctagtggttacctaaagatacccactg 653 Query: 660 atatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaa 719 |||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 654 atatgacagattatttgaagggttgcaagtttcttccaaagcttaacaatgagataccaa 713 Query: 720 gtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggtactgatca 779 |||||||||| ||| |||||| ||||||| |||||| |||| || | ||| |||| | Sbjct: 714 gtgaaagaaatgctacgtataaacaaagattcagcagcctggaaaatctagtattgatta 773 Query: 780 tgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattatcctg 839 ||||||| ||||||||||| || ||||| |||||||| |||||||| || || ||||| | Sbjct: 774 tgtttgaggacgacgcagtgttaataccccgggaaacggcatggttcgggtactatcccg 833 Query: 840 atggcgcctttaatcctgtgctgcctcctcaggagacaaagctatatactgaagactgga 899 |||||||||| | ||| |||| ||| ||||| |||||||| | || || || ||||||| Sbjct: 834 atggcgccttcagtccagtgcagccacctcaaaagacaaagttgtacacggaggactgga 893 Query: 900 tcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgccaggag 956 ||||||||| | ||||||| ||| |||||||||||||||| || || |||||||||| Sbjct: 894 tcggcttgaaggctttggaggaggctgggcgtgttaagttcgtatcagtgccaggag 950
>ref|NM_001055185.1| Oryza sativa (japonica cultivar-group) Os03g0101100 (Os03g0101100) mRNA, complete cds Length = 1227 Score = 345 bits (174), Expect = 3e-91 Identities = 396/470 (84%) Strand = Plus / Plus Query: 413 ggttacagcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtac 472 ||||||| ||| |||||||||| ||||||||| | ||||| || ||||| |||||| Sbjct: 336 ggttacaatatagttggtctttcacaggggaacctgattggtcgagcagttgttgagttt 395 Query: 473 tgtgatggtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtact 532 ||||||| ||| |||||||| ||||||||||| ||| | || |||||||| ||||||||| Sbjct: 396 tgtgatgatgggccaccggtcaagaatttcatttcactcggtggccctcatgctggtact 455 Query: 533 gcttcagtgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaa 592 |||||||||||||||||||||||||||||| ||||| |||||| |||| |||||| || Sbjct: 456 gcttcagtgccactttgtggttctggtattttttgcattcttgctgattccctgattaaa 515 Query: 593 ctggagatatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagatt 652 ||||||| || ||| ||||||| |||||||||||||| ||||| |||||| | || || Sbjct: 516 atggagatctactcagactatgtccaggcacatcttgcacctagtggttacatgaaaatc 575 Query: 653 cccactgatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgag 712 || |||||||| |||||||||| |||||||| | ||||||||| |||||||| |||||| Sbjct: 576 ccaactgatatttcagattatttaaagggttgtagatttcttccaaagcttaacaatgag 635 Query: 713 ataccaagtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggta 772 ||||| |||||||||| || || || ||||| ||||||||||| ||||| |||||| Sbjct: 636 ttaccaggtgaaagaaatgccacctacaaggaaaggtttagcagcttagagaatttggta 695 Query: 773 ctgatcatgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttat 832 | ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 696 ttaatcatgtttcaggatgacgctgtcttgatacctcgggaaacagcatggtttggttac 755 Query: 833 tatcctgatggcgcctttaatcctgtgctgcctcctcaggagacaaagct 882 ||||| ||||| | || ||||||| ||||| |||||| |||||||||| Sbjct: 756 tatccagatggaggtttcgatcctgtcctgccccctcagaagacaaagct 805 Score = 81.8 bits (41), Expect = 6e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 197 gcctccgcggtgcccttcatcgtcctgcacgggatcggggaccagtgcg 245 |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 144 gcctccgccgtgcccttcatcgtcctgcacgggatcggagaccagtgcg 192
>dbj|AK120839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G01, full insert sequence Length = 1229 Score = 345 bits (174), Expect = 3e-91 Identities = 396/470 (84%) Strand = Plus / Plus Query: 413 ggttacagcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtac 472 ||||||| ||| |||||||||| ||||||||| | ||||| || ||||| |||||| Sbjct: 337 ggttacaatatagttggtctttcacaggggaacctgattggtcgagcagttgttgagttt 396 Query: 473 tgtgatggtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtact 532 ||||||| ||| |||||||| ||||||||||| ||| | || |||||||| ||||||||| Sbjct: 397 tgtgatgatgggccaccggtcaagaatttcatttcactcggtggccctcatgctggtact 456 Query: 533 gcttcagtgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaa 592 |||||||||||||||||||||||||||||| ||||| |||||| |||| |||||| || Sbjct: 457 gcttcagtgccactttgtggttctggtattttttgcattcttgctgattccctgattaaa 516 Query: 593 ctggagatatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagatt 652 ||||||| || ||| ||||||| |||||||||||||| ||||| |||||| | || || Sbjct: 517 atggagatctactcagactatgtccaggcacatcttgcacctagtggttacatgaaaatc 576 Query: 653 cccactgatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgag 712 || |||||||| |||||||||| |||||||| | ||||||||| |||||||| |||||| Sbjct: 577 ccaactgatatttcagattatttaaagggttgtagatttcttccaaagcttaacaatgag 636 Query: 713 ataccaagtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggta 772 ||||| |||||||||| || || || ||||| ||||||||||| ||||| |||||| Sbjct: 637 ttaccaggtgaaagaaatgccacctacaaggaaaggtttagcagcttagagaatttggta 696 Query: 773 ctgatcatgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttat 832 | ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 697 ttaatcatgtttcaggatgacgctgtcttgatacctcgggaaacagcatggtttggttac 756 Query: 833 tatcctgatggcgcctttaatcctgtgctgcctcctcaggagacaaagct 882 ||||| ||||| | || ||||||| ||||| |||||| |||||||||| Sbjct: 757 tatccagatggaggtttcgatcctgtcctgccccctcagaagacaaagct 806 Score = 81.8 bits (41), Expect = 6e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 197 gcctccgcggtgcccttcatcgtcctgcacgggatcggggaccagtgcg 245 |||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 145 gcctccgccgtgcccttcatcgtcctgcacgggatcggagaccagtgcg 193
>gb|BT016405.1| Zea mays clone Contig238 mRNA sequence Length = 1161 Score = 274 bits (138), Expect = 8e-70 Identities = 477/590 (80%) Strand = Plus / Plus Query: 416 tacagcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtactgt 475 |||| |||| ||||||| |||||||||||||| ||||| || ||||| ||||||||||| Sbjct: 284 tacaacatagttggtctgtctcaggggaacttgattggtcgagcagtggttgagtactgt 343 Query: 476 gatggtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtactgct 535 |||| |||||| ||||| |||||||||||||| | || || ||||| |||||||| ||| Sbjct: 344 gatgatggaccgccggtcaagaatttcatctctctaggaggtcctcatgctggtaccgct 403 Query: 536 tcagtgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaactg 595 |||||||| |||||||||||||| || ||||| || ||||||||| ||||| || || Sbjct: 404 tcagtgcctctttgtggttctggatttttttgcattattgttgatgctctgatcaaattg 463 Query: 596 gagatatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagattccc 655 ||||| || ||| |||||||||||| ||||||||| ||||| || ||||| || || || Sbjct: 464 gagatctactcagactatgtgcaggaacatcttgcacctagtggctacctcaaaatccca 523 Query: 656 actgatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagata 715 ||||||||| |||||||| ||||| |||| | |||||||| || ||||| ||||| || Sbjct: 524 actgatatggcagattatctgaagagttgtaggtttcttccaaaacttaacaatgaaatt 583 Query: 716 ccaagtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggtactg 775 ||| | ||||||| || || || |||||||| || ||||| ||||| ||||| ||| Sbjct: 584 ccagataaaagaaatgccacctacaaggaaagattcagtagcttagagaatttggttctg 643 Query: 776 atcatgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattat 835 || |||||| | || || |||||| ||||||| || ||||| |||||||||||||| || Sbjct: 644 attatgtttcaggatgatgcagtcctgataccacgagaaacggcatggtttggttactac 703 Query: 836 cctgatggcgcctttaatcctgtgctgcctcctcaggagacaaagctatatactgaagac 895 |||||||| |||||| |||| || || || |||||| |||| || || ||| |||||| Sbjct: 704 cctgatggagcctttgatccagttctaccacctcagaagacgaaactgtatgaggaagac 763 Query: 896 tggatcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgccagga 955 ||||| || |||| ||| ||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 764 tggattggtttgaagacactggatgaagcagggcgggtgaagtttgtgtctgtgccggga 823 Query: 956 ggtcacctccgcatatcaaggagcgacatgaagaagtacatagtgcctta 1005 ||||| || | || || | | ||||||||||||||||| |||||||| Sbjct: 824 ggtcatcttggtatctccaaaggtgacatgaagaagtacattgtgcctta 873 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 198 cctccgcggtgcccttcatcgtcctgcacgggatcggggaccagtgcg 245 ||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 66 cctccgccctgcctttcatcgtcctgcacgggattggggaccagtgcg 113
>gb|AY104890.1| Zea mays PCO071167 mRNA sequence Length = 1683 Score = 274 bits (138), Expect = 8e-70 Identities = 477/590 (80%) Strand = Plus / Plus Query: 416 tacagcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtactgt 475 |||| |||| ||||||| |||||||||||||| ||||| || ||||| ||||||||||| Sbjct: 354 tacaacatagttggtctgtctcaggggaacttgattggtcgagcagtggttgagtactgt 413 Query: 476 gatggtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtactgct 535 |||| |||||| ||||| |||||||||||||| | || || ||||| |||||||| ||| Sbjct: 414 gatgatggaccgccggtcaagaatttcatctctctaggaggtcctcatgctggtaccgct 473 Query: 536 tcagtgccactttgtggttctggtattctttgcgttcttgttgatgtgctgattcaactg 595 |||||||| |||||||||||||| || ||||| || ||||||||| ||||| || || Sbjct: 474 tcagtgcctctttgtggttctggatttttttgcattattgttgatgctctgatcaaattg 533 Query: 596 gagatatattcaaactatgtgcaggcacatcttgcccctagcggttacctaaagattccc 655 ||||| || ||| |||||||||||| ||||||||| ||||| || ||||| || || || Sbjct: 534 gagatctactcagactatgtgcaggaacatcttgcacctagtggctacctcaaaatccca 593 Query: 656 actgatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagata 715 ||||||||| |||||||| ||||| |||| | |||||||| || ||||| ||||| || Sbjct: 594 actgatatggcagattatctgaagagttgtaggtttcttccaaaacttaacaatgaaatt 653 Query: 716 ccaagtgaaagaaacattacatataaagaaagatttagcagcttggagaacttggtactg 775 ||| | ||||||| || || || |||||||| || ||||| ||||| ||||| ||| Sbjct: 654 ccagataaaagaaatgccacctacaaggaaagattcagtagcttagagaatttggttctg 713 Query: 776 atcatgtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattat 835 || |||||| | || || |||||| ||||||| || ||||| |||||||||||||| || Sbjct: 714 attatgtttcaggatgatgcagtcctgataccacgagaaacggcatggtttggttactac 773 Query: 836 cctgatggcgcctttaatcctgtgctgcctcctcaggagacaaagctatatactgaagac 895 |||||||| |||||| |||| || || || |||||| |||| || || ||| |||||| Sbjct: 774 cctgatggagcctttgatccagttctaccacctcagaagacgaaactgtatgaggaagac 833 Query: 896 tggatcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgccagga 955 ||||| || |||| ||| ||||||| | ||||| || ||||||||||| ||||| ||| Sbjct: 834 tggattggtttgaagacactggatgaagcagggcgggtgaagtttgtgtctgtgccggga 893 Query: 956 ggtcacctccgcatatcaaggagcgacatgaagaagtacatagtgcctta 1005 ||||| || | || || | | ||||||||||||||||| |||||||| Sbjct: 894 ggtcatcttggtatctccaaaggtgacatgaagaagtacattgtgcctta 943 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 198 cctccgcggtgcccttcatcgtcctgcacgggatcggggaccagtgcg 245 ||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 136 cctccgccctgcctttcatcgtcctgcacgggattggggaccagtgcg 183
>emb|CT834076.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105O20, full insert sequence Length = 1089 Score = 155 bits (78), Expect = 5e-34 Identities = 153/178 (85%) Strand = Plus / Plus Query: 666 cagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaagtgaaa 725 |||||||||| |||||||| | ||||||||| |||||||| |||||| ||||| |||||| Sbjct: 366 cagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaa 425 Query: 726 gaaacattacatataaagaaagatttagcagcttggagaacttggtactgatcatgtttg 785 |||| || || || ||||| ||||||||||| ||||| |||||| | ||||||||| Sbjct: 426 gaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatgtttc 485 Query: 786 aagacgacgcagtcttgatacctcgggaaacagcatggtttggttattatcctgatgg 843 | || ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 486 aggatgacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatgg 543 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 584 ctgattcaactggagatatattcaaactatgtgcaggcacatcttgcccctagcggttac 643 |||||| || ||||||| || ||| ||||||||| |||||||||||| ||||| |||||| Sbjct: 20 ctgattaaaatggagatctactcagactatgtgcgggcacatcttgcacctagtggttac 79
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 659 gatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagatacca 718 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 21701349 gatatgacagattatttgaagggttgcaagtttcttccaaagcttaacaatgagatacca 21701408 Query: 719 agtgaaagaaacattacatataaagaaagatttagcagcttgga 762 ||||||||||| ||| |||||| ||||||| |||||| |||| Sbjct: 21701409 agtgaaagaaatgctacgtataaacaaagattcagcagcctgga 21701452 Score = 109 bits (55), Expect = 3e-20 Identities = 106/123 (86%) Strand = Plus / Plus Query: 893 gactggatcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgcca 952 |||||||||||||||| | ||||||| ||| |||||||||||||||| || || |||||| Sbjct: 21702208 gactggatcggcttgaaggctttggaggaggctgggcgtgttaagttcgtatcagtgcca 21702267 Query: 953 ggaggtcacctccgcatatcaaggagcgacatgaagaagtacatagtgccttatttgaca 1012 ||||||||||| |||| || || || |||| |||||||||||||||||| || |||| | Sbjct: 21702268 ggaggtcacctgagcatctccagaagtgacacgaagaagtacatagtgccatacttgaaa 21702327 Query: 1013 ccg 1015 ||| Sbjct: 21702328 ccg 21702330 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 437 caggggaacttaattgggcgggcagtaattgagtactgtgatggtggaccaccggta 493 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 21699193 caggggaacttaattggtcgggcagtaattgagtactgcgatggtggaccaccggta 21699249 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 180 cggcgctcgcgccggtggcctccgcggtgcccttcatcgtcctgcacgg 228 ||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 21697002 cggcgctcgtcccggtggcctccgccgtgcccttcatcgtcctgcacgg 21697050 Score = 67.9 bits (34), Expect = 9e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 781 gtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattatcctga 840 |||||| ||||||||||| || ||||| |||||||| |||||||| || || ||||| || Sbjct: 21701990 gtttgaggacgacgcagtgttaataccccgggaaacggcatggttcgggtactatcccga 21702049 Query: 841 tggcgcctttaatcctgtgctgcctcctca 870 ||||||||| | ||| |||| ||| ||||| Sbjct: 21702050 tggcgccttcagtccagtgcagccacctca 21702079 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 490 ggtaaagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttg 549 |||||||||||||||||| ||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 21699440 ggtaaagaatttcatctcgattggtggtcctcatgctggtacggcatcagtaccactttg 21699499 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 564 tttgcgttcttgttgatgtgctgattcaactggagatatattcaaactatgtgcagg 620 |||| |||||| |||||| |||||| || |||||||||||||||||||||| |||| Sbjct: 21700463 tttgtgttcttattgatgctctgattaaattggagatatattcaaactatgtacagg 21700519 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 615 tgcaggcacatcttgcccctagcggttacctaaagattcccactg 659 |||||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 21700620 tgcaggcacaccttgctcctagtggttacctaaagatacccactg 21700664 Score = 52.0 bits (26), Expect = 0.005 Identities = 71/86 (82%) Strand = Plus / Plus Query: 227 gggatcggggaccagtgcgggaacaacgggatcgcctccttcaccgacgagctcgcggag 286 |||||||| |||||||||| |||| ||||| || ||||||||||| ||| | ||| Sbjct: 21697170 gggatcggcgaccagtgcgagaacggtgggatggcgtccttcaccgaaatgcttggggaa 21697229 Query: 287 tggtcgggatccaagggatactgcat 312 ||||| || ||||||||||||||||| Sbjct: 21697230 tggtccggctccaagggatactgcat 21697255 Score = 50.1 bits (25), Expect = 0.022 Identities = 49/57 (85%) Strand = Plus / Plus Query: 384 aggtaaaggaaatggaagagcttcgtgaaggttacagcataattggtctttctcagg 440 |||| ||| ||||| |||| || ||| |||||||||||||| |||| |||||||||| Sbjct: 21698658 aggtgaagaaaatgaaagaactccgtaaaggttacagcatagttggcctttctcagg 21698714 Score = 48.1 bits (24), Expect = 0.085 Identities = 45/52 (86%) Strand = Plus / Plus Query: 314 gaaattgggagaggatcatgggattcctggttaatgccacttcaagatcagg 365 |||||||| |||||| ||||||| || ||| | |||||||||||||| |||| Sbjct: 21698407 gaaattggaagaggagcatgggactcttggctgatgccacttcaagagcagg 21698458 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 17452740 ggagcgggagcgggagcgcgag 17452761 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 20646483 ggccggagcgggagcgggagcg 20646462
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 659 gatatgacagattatttgaagggttgcaaatttcttcctaagcttaataatgagatacca 718 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 16032 gatatgacagattatttgaagggttgcaagtttcttccaaagcttaacaatgagatacca 16091 Query: 719 agtgaaagaaacattacatataaagaaagatttagcagcttgga 762 ||||||||||| ||| |||||| ||||||| |||||| |||| Sbjct: 16092 agtgaaagaaatgctacgtataaacaaagattcagcagcctgga 16135 Score = 109 bits (55), Expect = 3e-20 Identities = 106/123 (86%) Strand = Plus / Plus Query: 893 gactggatcggcttgaggactttggatgagactgggcgtgttaagtttgtgtcggtgcca 952 |||||||||||||||| | ||||||| ||| |||||||||||||||| || || |||||| Sbjct: 16891 gactggatcggcttgaaggctttggaggaggctgggcgtgttaagttcgtatcagtgcca 16950 Query: 953 ggaggtcacctccgcatatcaaggagcgacatgaagaagtacatagtgccttatttgaca 1012 ||||||||||| |||| || || || |||| |||||||||||||||||| || |||| | Sbjct: 16951 ggaggtcacctgagcatctccagaagtgacacgaagaagtacatagtgccatacttgaaa 17010 Query: 1013 ccg 1015 ||| Sbjct: 17011 ccg 17013 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 437 caggggaacttaattgggcgggcagtaattgagtactgtgatggtggaccaccggta 493 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 13876 caggggaacttaattggtcgggcagtaattgagtactgcgatggtggaccaccggta 13932 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 180 cggcgctcgcgccggtggcctccgcggtgcccttcatcgtcctgcacgg 228 ||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 11685 cggcgctcgtcccggtggcctccgccgtgcccttcatcgtcctgcacgg 11733 Score = 67.9 bits (34), Expect = 9e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 781 gtttgaagacgacgcagtcttgatacctcgggaaacagcatggtttggttattatcctga 840 |||||| ||||||||||| || ||||| |||||||| |||||||| || || ||||| || Sbjct: 16673 gtttgaggacgacgcagtgttaataccccgggaaacggcatggttcgggtactatcccga 16732 Query: 841 tggcgcctttaatcctgtgctgcctcctca 870 ||||||||| | ||| |||| ||| ||||| Sbjct: 16733 tggcgccttcagtccagtgcagccacctca 16762 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 490 ggtaaagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttg 549 |||||||||||||||||| ||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 14123 ggtaaagaatttcatctcgattggtggtcctcatgctggtacggcatcagtaccactttg 14182 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 564 tttgcgttcttgttgatgtgctgattcaactggagatatattcaaactatgtgcagg 620 |||| |||||| |||||| |||||| || |||||||||||||||||||||| |||| Sbjct: 15146 tttgtgttcttattgatgctctgattaaattggagatatattcaaactatgtacagg 15202 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 615 tgcaggcacatcttgcccctagcggttacctaaagattcccactg 659 |||||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 15303 tgcaggcacaccttgctcctagtggttacctaaagatacccactg 15347 Score = 52.0 bits (26), Expect = 0.005 Identities = 71/86 (82%) Strand = Plus / Plus Query: 227 gggatcggggaccagtgcgggaacaacgggatcgcctccttcaccgacgagctcgcggag 286 |||||||| |||||||||| |||| ||||| || ||||||||||| ||| | ||| Sbjct: 11853 gggatcggcgaccagtgcgagaacggtgggatggcgtccttcaccgaaatgcttggggaa 11912 Query: 287 tggtcgggatccaagggatactgcat 312 ||||| || ||||||||||||||||| Sbjct: 11913 tggtccggctccaagggatactgcat 11938 Score = 50.1 bits (25), Expect = 0.022 Identities = 49/57 (85%) Strand = Plus / Plus Query: 384 aggtaaaggaaatggaagagcttcgtgaaggttacagcataattggtctttctcagg 440 |||| ||| ||||| |||| || ||| |||||||||||||| |||| |||||||||| Sbjct: 13341 aggtgaagaaaatgaaagaactccgtaaaggttacagcatagttggcctttctcagg 13397 Score = 48.1 bits (24), Expect = 0.085 Identities = 45/52 (86%) Strand = Plus / Plus Query: 314 gaaattgggagaggatcatgggattcctggttaatgccacttcaagatcagg 365 |||||||| |||||| ||||||| || ||| | |||||||||||||| |||| Sbjct: 13090 gaaattggaagaggagcatgggactcttggctgatgccacttcaagagcagg 13141
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 437 caggggaacttaattgggcgggcagtaattgagtactgtgatggtggaccaccggta 493 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 131097 caggggaacttaattggtcgggcagtaattgagtactgcgatggtggaccaccggta 131153 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 180 cggcgctcgcgccggtggcctccgcggtgcccttcatcgtcctgcacgg 228 ||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 128906 cggcgctcgtcccggtggcctccgccgtgcccttcatcgtcctgcacgg 128954 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 490 ggtaaagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttg 549 |||||||||||||||||| ||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 131344 ggtaaagaatttcatctcgattggtggtcctcatgctggtacggcatcagtaccactttg 131403 Score = 58.0 bits (29), Expect = 9e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 564 tttgcgttcttgttgatgtgctgattcaactggagatatattcaaactatgtgcagg 620 |||| |||||| |||||| |||||| || |||||||||||||||||||||| |||| Sbjct: 132367 tttgtgttcttattgatgctctgattaaattggagatatattcaaactatgtacagg 132423 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 615 tgcaggcacatcttgcccctagcggttacctaaagattcccactg 659 |||||||||| ||||| ||||| |||||||||||||| ||||||| Sbjct: 132524 tgcaggcacaccttgctcctagtggttacctaaagatacccactg 132568 Score = 52.0 bits (26), Expect = 0.005 Identities = 71/86 (82%) Strand = Plus / Plus Query: 227 gggatcggggaccagtgcgggaacaacgggatcgcctccttcaccgacgagctcgcggag 286 |||||||| |||||||||| |||| ||||| || ||||||||||| ||| | ||| Sbjct: 129074 gggatcggcgaccagtgcgagaacggtgggatggcgtccttcaccgaaatgcttggggaa 129133 Query: 287 tggtcgggatccaagggatactgcat 312 ||||| || ||||||||||||||||| Sbjct: 129134 tggtccggctccaagggatactgcat 129159 Score = 50.1 bits (25), Expect = 0.022 Identities = 49/57 (85%) Strand = Plus / Plus Query: 384 aggtaaaggaaatggaagagcttcgtgaaggttacagcataattggtctttctcagg 440 |||| ||| ||||| |||| || ||| |||||||||||||| |||| |||||||||| Sbjct: 130562 aggtgaagaaaatgaaagaactccgtaaaggttacagcatagttggcctttctcagg 130618 Score = 48.1 bits (24), Expect = 0.085 Identities = 45/52 (86%) Strand = Plus / Plus Query: 314 gaaattgggagaggatcatgggattcctggttaatgccacttcaagatcagg 365 |||||||| |||||| ||||||| || ||| | |||||||||||||| |||| Sbjct: 130311 gaaattggaagaggagcatgggactcttggctgatgccacttcaagagcagg 130362
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 81.8 bits (41), Expect = 6e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 791 gacgcagtcttgatacctcgggaaacagcatggtttggttattatcctgatgg 843 ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 22260 gacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatgg 22312 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 494 aagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttgtggt 553 ||||||||||| ||| | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 20351 aagaatttcatttcactcggtggccctcatgctggtactgcttcagtgccactttgtggt 20410 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 666 cagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaagtgaaa 725 |||||||||| |||||||| | ||||||||| |||||||| |||||| ||||| |||||| Sbjct: 21500 cagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaa 21559 Query: 726 gaaacattacatataaagaaagatttagcagcttggagaacttggtactgatcatg 781 |||| || || || ||||| ||||||||||| ||||| |||||| | |||||| Sbjct: 21560 gaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatg 21615 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 197 gcctccgcggtgcccttcatcgtcctgcacgg 228 |||||||| ||||||||||||||||||||||| Sbjct: 19018 gcctccgccgtgcccttcatcgtcctgcacgg 19049 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 615 tgcaggcacatcttgcccctagcggttac 643 |||||||||||||||| ||||| |||||| Sbjct: 21185 tgcaggcacatcttgcacctagtggttac 21213
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 81.8 bits (41), Expect = 6e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 791 gacgcagtcttgatacctcgggaaacagcatggtttggttattatcctgatgg 843 ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88260 gacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatgg 88312 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 494 aagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttgtggt 553 ||||||||||| ||| | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 86351 aagaatttcatttcactcggtggccctcatgctggtactgcttcagtgccactttgtggt 86410 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 666 cagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaagtgaaa 725 |||||||||| |||||||| | ||||||||| |||||||| |||||| ||||| |||||| Sbjct: 87500 cagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaa 87559 Query: 726 gaaacattacatataaagaaagatttagcagcttggagaacttggtactgatcatg 781 |||| || || || ||||| ||||||||||| ||||| |||||| | |||||| Sbjct: 87560 gaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatg 87615 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 197 gcctccgcggtgcccttcatcgtcctgcacgg 228 |||||||| ||||||||||||||||||||||| Sbjct: 85018 gcctccgccgtgcccttcatcgtcctgcacgg 85049 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 20450922 ggccggagcgggagcgggagcg 20450943 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 615 tgcaggcacatcttgcccctagcggttac 643 |||||||||||||||| ||||| |||||| Sbjct: 87185 tgcaggcacatcttgcacctagtggttac 87213
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 81.8 bits (41), Expect = 6e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 791 gacgcagtcttgatacctcgggaaacagcatggtttggttattatcctgatgg 843 ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 36958 gacgctgtcttgatacctcgggaaacagcatggtttggttactatccagatgg 36906 Score = 79.8 bits (40), Expect = 2e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 666 cagattatttgaagggttgcaaatttcttcctaagcttaataatgagataccaagtgaaa 725 |||||||||| |||||||| | ||||||||| |||||||| |||||| ||||| |||||| Sbjct: 37718 cagattatttaaagggttgtagatttcttccaaagcttaacaatgagttaccaggtgaaa 37659 Query: 726 gaaacattacatataaagaaagatttagcagcttggagaacttggtactgatcatg 781 |||| || || || ||||| ||||||||||| ||||| |||||| | |||||| Sbjct: 37658 gaaatgccacctacaaggaaaggtttagcagcttagagaatttggtattaatcatg 37603 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 494 aagaatttcatctcaattgggggccctcacgctggtactgcttcagtgccactttgtggt 553 ||||||||||| ||| | || |||||||| |||||||||||||||||||||||||||||| Sbjct: 38867 aagaatttcatttcactcggtggccctcatgctggtactgcttcagtgccactttgtggt 38808 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 197 gcctccgcggtgcccttcatcgtcctgcacgg 228 |||||||| ||||||||||||||||||||||| Sbjct: 40200 gcctccgccgtgcccttcatcgtcctgcacgg 40169 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 615 tgcaggcacatcttgcccctagcggttac 643 |||||||||||||||| ||||| |||||| Sbjct: 38033 tgcaggcacatcttgcacctagtggttac 38005
>ref|NM_115898.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase (AT3G60340) mRNA, complete cds Length = 1643 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 821 gagaccaagctatatactgaagactggattggtttgag 858
>ref|NM_180397.1| Arabidopsis thaliana palmitoyl-(protein) hydrolase (AT3G60340) mRNA, complete cds Length = 1774 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 952 gagaccaagctatatactgaagactggattggtttgag 989
>gb|AY142494.1| Arabidopsis thaliana putative palmitoyl-protein thioesterase precursor (At3g60340) mRNA, complete cds Length = 1048 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 730 gagaccaagctatatactgaagactggattggtttgag 767
>gb|AY035032.1| Arabidopsis thaliana putative palmitoyl-protein thioesterase precursor (At3g60340) mRNA, complete cds Length = 1321 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 916 gagaccaagctatatactgaagactggattggtttgag 953
>gb|AY087806.1| Arabidopsis thaliana clone 38539 mRNA, complete sequence Length = 1151 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 759 gagaccaagctatatactgaagactggattggtttgag 796
>emb|BX825693.1|CNS0A7JS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL56ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 925 gagaccaagctatatactgaagactggattggtttgag 962
>emb|BX823241.1|CNS0A7KQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 951 gagaccaagctatatactgaagactggattggtttgag 988
>emb|BX822721.1|CNS0A7MC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1248 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 950 gagaccaagctatatactgaagactggattggtttgag 987
>emb|BX822496.1|CNS0A7MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB41ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1251 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 887 gagaccaagctatatactgaagactggattggtttgag 924
>emb|BX822334.1|CNS0A7LZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 52.0 bits (26), Expect = 0.005 Identities = 35/38 (92%) Strand = Plus / Plus Query: 872 gagacaaagctatatactgaagactggatcggcttgag 909 ||||| ||||||||||||||||||||||| || ||||| Sbjct: 931 gagaccaagctatatactgaagactggattggtttgag 968
>gb|AC183493.1| Brassica oleracea Contig B, complete sequence Length = 284024 Score = 50.1 bits (25), Expect = 0.022 Identities = 43/49 (87%) Strand = Plus / Minus Query: 873 agacaaagctatatactgaagactggatcggcttgaggactttggatga 921 |||||||||||||||| ||||||||||| || |||| || |||||||| Sbjct: 127420 agacaaagctatatacagaagactggattggtttgaaaacattggatga 127372 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 695 cctaagcttaataatgagataccaa 719 ||||||||||| ||||||||||||| Sbjct: 127679 cctaagcttaacaatgagataccaa 127655
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 50.1 bits (25), Expect = 0.022 Identities = 34/37 (91%) Strand = Plus / Plus Query: 873 agacaaagctatatactgaagactggatcggcttgag 909 |||| ||||||||||||||||||||||| || ||||| Sbjct: 81103 agaccaagctatatactgaagactggattggtttgag 81139 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 catggtttggttattatcctgatgg 843 |||||||||| |||||||||||||| Sbjct: 80956 catggtttggatattatcctgatgg 80980
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10 Length = 103787 Score = 50.1 bits (25), Expect = 0.022 Identities = 34/37 (91%) Strand = Plus / Plus Query: 873 agacaaagctatatactgaagactggatcggcttgag 909 |||| ||||||||||||||||||||||| || ||||| Sbjct: 7650 agaccaagctatatactgaagactggattggtttgag 7686 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 catggtttggttattatcctgatgg 843 |||||||||| |||||||||||||| Sbjct: 7503 catggtttggatattatcctgatgg 7527
>gb|BT013017.1| Lycopersicon esculentum clone 114255R, mRNA sequence Length = 1422 Score = 48.1 bits (24), Expect = 0.085 Identities = 123/156 (78%) Strand = Plus / Plus Query: 413 ggttacagcataattggtctttctcaggggaacttaattgggcgggcagtaattgagtac 472 ||||||| |||| ||||||| || ||||| ||| |||| || || || || | || ||| Sbjct: 411 ggttacaacatagttggtctatcacagggtaacctaataggccgagctgttgtggaatac 470 Query: 473 tgtgatggtggaccaccggtaaagaatttcatctcaattgggggccctcacgctggtact 532 ||||| || ||||||| ||| |||||||| || || | || || ||||| ||||| ||| Sbjct: 471 tgtgagggaggaccacaggttaagaatttgatttccttaggaggacctcatgctggcact 530 Query: 533 gcttcagtgccactttgtggttctggtattctttgc 568 || ||||| || || ||||||||||| ||| ||||| Sbjct: 531 gcctcagttcctctctgtggttctggcattttttgc 566
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 gagcgggagcgggagcgcgagag 79 ||||||||||||||||||||||| Sbjct: 10754634 gagcgggagcgggagcgcgagag 10754656
>ref|XM_391967.3| PREDICTED: Apis mellifera similar to CG15105-PA, isoform A (LOC408420), mRNA Length = 5462 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgagagagggcga 86 ||||||||||||||||||||| |||| |||| Sbjct: 3953 ggagcgggagcgggagcgcgaaagagagcga 3983
>ref|NM_115899.2| Arabidopsis thaliana ubiquitin-protein ligase (AT3G60350) mRNA, complete cds Length = 3722 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Minus Query: 879 agctatatactgaagactggatcggcttgag 909 |||||||||||||||||||||| || ||||| Sbjct: 3722 agctatatactgaagactggattggtttgag 3692
>ref|NM_132432.1| Drosophila melanogaster CG2186-RA (CG2186), mRNA Length = 4449 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 gagcgggagcgggagcgcgagag 79 ||||||||||||||||||||||| Sbjct: 2261 gagcgggagcgggagcgcgagag 2283
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 gagcgggagcgggagcgcgagag 79 ||||||||||||||||||||||| Sbjct: 33080 gagcgggagcgggagcgcgagag 33102
>gb|BT023500.1| Drosophila melanogaster LD29862 full insert cDNA Length = 4423 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 gagcgggagcgggagcgcgagag 79 ||||||||||||||||||||||| Sbjct: 2221 gagcgggagcgggagcgcgagag 2243
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcgcggcgctcgcgccggtggcc 199 ||||||||||||||||||||||| Sbjct: 2509057 tcgcggcgctcgcgccggtggcc 2509035
>emb|BX823341.1|CNS0A7KR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Plus Query: 879 agctatatactgaagactggatcggcttgag 909 |||||||||||||||||||||| || ||||| Sbjct: 956 agctatatactgaagactggattggtttgag 986 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 catggtttggttattatcctgatgg 843 |||||||||| |||||||||||||| Sbjct: 896 catggtttggatattatcctgatgg 920
>gb|AC125292.4| Drosophila melanogaster X BAC CH223-5O10 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 95026 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 gagcgggagcgggagcgcgagag 79 ||||||||||||||||||||||| Sbjct: 89059 gagcgggagcgggagcgcgagag 89081
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 cgctcgcgccggtggcctccgcggtg 208 |||| ||||||||||||||||||||| Sbjct: 1697781 cgctggcgccggtggcctccgcggtg 1697806
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 ccggtggcctccgcggtgccct 212 |||||||||||||||||||||| Sbjct: 2982351 ccggtggcctccgcggtgccct 2982330
>ref|NM_001071400.1| Oryza sativa (japonica cultivar-group) Os10g0478900 (Os10g0478900) mRNA, complete cds Length = 821 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 17 ggagcgggagcgggagcgcgag 38
>ref|NM_001057050.1| Oryza sativa (japonica cultivar-group) Os03g0569800 (Os03g0569800) mRNA, complete cds Length = 2448 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 113 ggccggagcgggagcgggagcg 134
>ref|NM_001049405.1| Oryza sativa (japonica cultivar-group) Os01g0314100 (Os01g0314100) mRNA, complete cds Length = 2003 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 240 ggccggagcgggagcgggagcg 219
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 gcggcgacgagggtgggccgga 58 |||||||||||||||||||||| Sbjct: 2481383 gcggcgacgagggtgggccgga 2481404 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 cgatggccgcgctgtcccccg 137 ||||||||||||||||||||| Sbjct: 5276596 cgatggccgcgctgtcccccg 5276616 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cgcggcgctcgcgccggtggc 198 ||||||||||||||||||||| Sbjct: 8025048 cgcggcgctcgcgccggtggc 8025068
>ref|XM_361112.1| Magnaporthe grisea 70-15 hypothetical protein (MG03655.4) partial mRNA Length = 2271 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgagagag 81 ||||||||||||||||||||| |||| Sbjct: 1788 ggagcgggagcgggagcgcgacagag 1813
>gb|AY557471.1| Sepia officinalis 18S ribosomal RNA gene, complete sequence Length = 2449 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 tcgtcgtcgccgccgtcttcgcggcgctcg 188 |||||||||||| |||| |||||||||||| Sbjct: 291 tcgtcgtcgccgtcgtcctcgcggcgctcg 320
>ref|XM_588828.2| PREDICTED: Bos taurus similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 (LOC511484), mRNA Length = 2463 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 1749 ggagcgggagcgggagcgcgag 1770
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 21042 ggagcgggagcgggagcgcgag 21063
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 11791669 ggccggagcgggagcgggagcg 11791690 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagc 72 ||||||||||||||||||||| Sbjct: 7347650 ggccggagcgggagcgggagc 7347630 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcga 76 ||||||||||||||||||||| Sbjct: 42268099 ggagcgggagcgggagcgcga 42268079
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 47935 ggccggagcgggagcgggagcg 47914
>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 Length = 95527 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 81848 ggagcgggagcgggagcgcgag 81827
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 102193 ggccggagcgggagcgggagcg 102214
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 81735 ggagcgggagcgggagcgcgag 81756
>gb|AC013354.6|AC013354 Genomic sequence for Arabidopsis thaliana BAC F15H18 from chromosome I, complete sequence Length = 95327 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1132 tctttgcattattaccttataa 1153 |||||||||||||||||||||| Sbjct: 44393 tctttgcattattaccttataa 44414
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 130837 ggccggagcgggagcgggagcg 130858
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 3954 ggccggagcgggagcgggagcg 3975
>dbj|AK120873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M17, full insert sequence Length = 2517 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 179 ggccggagcgggagcgggagcg 200
>emb|AJ606935.1| Sepia officinalis partial 18S rRNA gene Length = 1978 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 tcgtcgtcgccgccgtcttcgcggcgctcg 188 |||||||||||| |||| |||||||||||| Sbjct: 261 tcgtcgtcgccgtcgtcctcgcggcgctcg 290
>emb|BX833217.1|CNS09Z7L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1062 Score = 44.1 bits (22), Expect = 1.3 Identities = 40/46 (86%) Strand = Plus / Plus Query: 622 acatcttgcccctagcggttacctaaagattcccactgatatgaca 667 ||||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 543 acatcttgctcctagtggttatctcaaaattcctactgatatgaca 588
>dbj|AK070080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045J04, full insert sequence Length = 2978 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 114 ggccggagcgggagcgggagcg 135
>dbj|AK067157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E09, full insert sequence Length = 2003 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagcg 73 |||||||||||||||||||||| Sbjct: 240 ggccggagcgggagcgggagcg 219
>dbj|AK062836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-G12, full insert sequence Length = 821 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ggagcgggagcgggagcgcgag 77 |||||||||||||||||||||| Sbjct: 17 ggagcgggagcgggagcgcgag 38
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 cgctcgcgccggtggcctccgcggtg 208 |||| ||||||||||||||||||||| Sbjct: 2539498 cgctggcgccggtggcctccgcggtg 2539473
>emb|CT832505.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121E20, full insert sequence Length = 1686 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcga 76 ||||||||||||||||||||| Sbjct: 198 ggagcgggagcgggagcgcga 178
>ref|NM_001051993.1| Oryza sativa (japonica cultivar-group) Os01g0959000 (Os01g0959000) mRNA, complete cds Length = 1688 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcga 76 ||||||||||||||||||||| Sbjct: 199 ggagcgggagcgggagcgcga 179
>ref|NM_001049041.1| Oryza sativa (japonica cultivar-group) Os01g0232700 (Os01g0232700) mRNA, complete cds Length = 1776 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagc 72 ||||||||||||||||||||| Sbjct: 66 ggccggagcgggagcgggagc 46
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 gctggccctcgtcgtcgccgc 171 ||||||||||||||||||||| Sbjct: 4221610 gctggccctcgtcgtcgccgc 4221590
>emb|CU137660.1| Medicago truncatula chromosome 5 clone mth2-56j22, COMPLETE SEQUENCE Length = 96010 Score = 42.1 bits (21), Expect = 5.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 812 gaaacagcatggtttggttattatcctgatggc 844 |||||| | ||||||||||||||||| |||||| Sbjct: 51530 gaaacatcctggtttggttattatccagatggc 51498
>ref|XR_024922.1| PREDICTED: Pan troglodytes similar to KIAA0298 protein (LOC451011), mRNA Length = 7745 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 3099 ctgtgctgcctcctcaggaga 3119
>ref|XM_515269.2| PREDICTED: Pan troglodytes similar to FAM110C (LOC458988), mRNA Length = 1521 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 1023 cctcctgcagcccctcgtcgtcgccgccg 995
>gb|AC189297.1| Brassica rapa subsp. pekinensis clone KBrB027O09, complete sequence Length = 149009 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 819 catggtttggttattatcctgatgg 843 |||||||||| |||||||||||||| Sbjct: 139111 catggtttggatattatcctgatgg 139135
>gb|AC189261.1| Brassica rapa subsp. pekinensis clone KBrB021P11, complete sequence Length = 116928 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 695 cctaagcttaataatgagataccaa 719 ||||||||||| ||||||||||||| Sbjct: 115954 cctaagcttaacaatgagataccaa 115978
>ref|XM_001097566.1| PREDICTED: Macaca mulatta tripartite motif-containing 66 (TRIM66), mRNA Length = 4302 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 2910 ctgtgctgcctcctcaggaga 2930
>emb|BX897691.14| Zebrafish DNA sequence from clone DKEY-168E3 in linkage group 7, complete sequence Length = 207478 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 895 ctggatcggcttgaggactttggat 919 ||||||||||||||||| ||||||| Sbjct: 122455 ctggatcggcttgaggaatttggat 122431
>ref|NM_001077710.1| Homo sapiens family with sequence similarity 110 member C (FAM110C), mRNA gb|DQ431183.1| Homo sapiens FAM110C (FAM110C) mRNA, complete cds Length = 966 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 820 cctcctgcagcccctcgtcgtcgccgccg 792
>ref|NM_124104.2| Arabidopsis thaliana palmitoyl-(protein) hydrolase (AT5G47330) mRNA, complete cds Length = 1120 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 623 catcttgcccctagcggttacctaaagattcccactgatatgaca 667 |||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 560 catcttgctcctagtggttatctcaaaattcctactgatatgaca 604
>gb|BT020483.1| Arabidopsis thaliana At5g47330 gene, complete cds Length = 974 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 623 catcttgcccctagcggttacctaaagattcccactgatatgaca 667 |||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 522 catcttgctcctagtggttatctcaaaattcctactgatatgaca 566
>gb|BT020407.1| Arabidopsis thaliana At5g47330 mRNA, complete cds Length = 945 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 623 catcttgcccctagcggttacctaaagattcccactgatatgaca 667 |||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 496 catcttgctcctagtggttatctcaaaattcctactgatatgaca 540
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cgcggcgctcgcgccggtggc 198 ||||||||||||||||||||| Sbjct: 3353803 cgcggcgctcgcgccggtggc 3353783
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence Length = 178426 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 88701 ctgtgctgcctcctcaggaga 88681
>gb|AY623660.1| Homo sapiens TNF receptor-associated factor 2 (TRAF2) gene, complete cds Length = 43834 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 gggccggagcgggagcgggagcgcgagag 79 ||||||||||||||||||| ||| ||||| Sbjct: 1777 gggccggagcgggagcgggggcgggagag 1805
>ref|XM_541269.2| PREDICTED: Canis familiaris similar to RAS and EF hand domain containing (LOC484152), mRNA Length = 2852 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 gccctcgtcgtcgccgccgtcttcg 179 ||||||||| ||||||||||||||| Sbjct: 339 gccctcgtcctcgccgccgtcttcg 315
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cgccggtggcctccgcggtgc 209 ||||||||||||||||||||| Sbjct: 2817193 cgccggtggcctccgcggtgc 2817173
>ref|XM_809411.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507991.80) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1133 ctttgcattattaccttataaatgcattg 1161 |||||||||||||| || ||||||||||| Sbjct: 180 ctttgcattattactttttaaatgcattg 208
>ref|XM_808992.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504035.120) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1133 ctttgcattattaccttataaatgcattg 1161 |||||||||||||| || ||||||||||| Sbjct: 180 ctttgcattattactttttaaatgcattg 208
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 tggccctcgtcgtcgccgccg 173 ||||||||||||||||||||| Sbjct: 4004633 tggccctcgtcgtcgccgccg 4004653
>emb|AL390882.12| Human DNA sequence from clone RP11-113D19 on chromosome 9p21.2-22.3 Contains the IFNA21 gene for interferon, alpha 21, the IFNW1 gene for interferon, omega 1, an interferon, omega 1 (IFNW1) pseudogene, the IFNB1 gene for interferon, beta 1, fibroblast, an interferon, beta 1, fibroblast (IFNB1) pseudogene and a novel gene, possible otholog of mouse RIKEN cDNA 4933428I03 gene, complete sequence Length = 162064 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 729 acattacatataaagaaagat 749 ||||||||||||||||||||| Sbjct: 11632 acattacatataaagaaagat 11612
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 51 gggccggagcgggagcgggagcgcgagag 79 ||||||||||||||||||| ||| ||||| Sbjct: 165134 gggccggagcgggagcgggggcgggagag 165162
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcga 76 ||||||||||||||||||||| Sbjct: 40056 ggagcgggagcgggagcgcga 40036
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 cgcggcgctcgcgccggtggc 198 ||||||||||||||||||||| Sbjct: 3053790 cgcggcgctcgcgccggtggc 3053810
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 gccggagcgggagcgggagcg 73 ||||||||||||||||||||| Sbjct: 231740 gccggagcgggagcgggagcg 231720
>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for ribosomal protein L27a and KIAA0298 gene Length = 275434 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 258097 ctgtgctgcctcctcaggaga 258117
>emb|CR937025.1|PT027O15 Pan troglodytes chromosome 11 BAC PTB-027O15, complete sequence Length = 155399 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 729 acattacatataaagaaagat 749 ||||||||||||||||||||| Sbjct: 120344 acattacatataaagaaagat 120364
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagc 72 ||||||||||||||||||||| Sbjct: 8678 ggccggagcgggagcgggagc 8658
>gb|AC084110.4|AC084110 Arabidopsis thaliana chromosome 1 BAC F27G20 genomic sequence, complete sequence Length = 56310 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 727 aaacattacatataaagaaag 747 ||||||||||||||||||||| Sbjct: 50609 aaacattacatataaagaaag 50589
>gb|BT004170.1| Arabidopsis thaliana clone RAFL15-31-H22 (R20833) putative palmitoyl-protein thioesterase precursor (At5g47330) mRNA, complete cds Length = 1135 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 623 catcttgcccctagcggttacctaaagattcccactgatatgaca 667 |||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 560 catcttgctcctagtggttatctcaaaattcctactgatatgaca 604
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 tggccctcgtcgtcgccgccg 173 ||||||||||||||||||||| Sbjct: 91930 tggccctcgtcgtcgccgccg 91950
>ref|XM_952623.1| Neurospora crassa OR74A hypothetical protein (NCU00245.1) partial mRNA Length = 828 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 gccggagcgggagcgggagcg 73 ||||||||||||||||||||| Sbjct: 364 gccggagcgggagcgggagcg 384
>gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, complete sequence Length = 170211 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 125796 ctgtgctgcctcctcaggaga 125816
>gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 127462 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 727 aaacattacatataaagaaag 747 ||||||||||||||||||||| Sbjct: 33108 aaacattacatataaagaaag 33088
>gb|AC097644.3| Homo sapiens cosmid clone XXcos-2052C30 from 2, complete sequence Length = 44008 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 6204 cctcctgcagcccctcgtcgtcgccgccg 6232
>gb|AC097643.3| Homo sapiens cosmid clone XXcos-2052C25 from 2, complete sequence Length = 36371 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 10441 cctcctgcagcccctcgtcgtcgccgccg 10469
>gb|AC097642.3| Homo sapiens cosmid clone XXcos-2052C22 from 2, complete sequence Length = 44838 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 28216 cctcctgcagcccctcgtcgtcgccgccg 28244
>gb|AC104056.5| Homo sapiens cosmid clone XXcos-2052C14 from 2, complete sequence Length = 36883 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 35565 cctcctgcagcccctcgtcgtcgccgccg 35593
>gb|AC103913.3| Homo sapiens cosmid clone XXcos-2052C4 from 2, complete sequence Length = 36816 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 145 cctcctgctggccctcgtcgtcgccgccg 173 |||||||| | |||||||||||||||||| Sbjct: 33693 cctcctgcagcccctcgtcgtcgccgccg 33721
>emb|BX830972.1|CNS09ZIK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1094 Score = 42.1 bits (21), Expect = 5.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 623 catcttgcccctagcggttacctaaagattcccactgatatgaca 667 |||||||| ||||| ||||| || || ||||| |||||||||||| Sbjct: 552 catcttgctcctagtggttatctcaaaattcctactgatatgaca 596
>dbj|AK070420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048A15, full insert sequence Length = 1690 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 ggagcgggagcgggagcgcga 76 ||||||||||||||||||||| Sbjct: 201 ggagcgggagcgggagcgcga 181
>dbj|AK069972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037L20, full insert sequence Length = 1777 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 ggccggagcgggagcgggagc 72 ||||||||||||||||||||| Sbjct: 67 ggccggagcgggagcgggagc 47
>gb|DQ333389.1| Elk herpesvirus glycoprotein C gene, complete cds Length = 1619 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gccctcgtcgtcgccgccgtc 175 ||||||||||||||||||||| Sbjct: 537 gccctcgtcgtcgccgccgtc 517
>gb|AC155347.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH093K03, complete sequence Length = 78322 Score = 42.1 bits (21), Expect = 5.3 Identities = 42/49 (85%) Strand = Plus / Minus Query: 873 agacaaagctatatactgaagactggatcggcttgaggactttggatga 921 |||||||||||||||| ||||| ||||| || |||| || |||||||| Sbjct: 47865 agacaaagctatatacagaagattggattggtttgaaaacattggatga 47817 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 695 cctaagcttaataatgagataccaa 719 ||||||||||| ||||||||||||| Sbjct: 48124 cctaagcttaacaatgagataccaa 48100
>dbj|AB002296.2| Homo sapiens mRNA for KIAA0298 protein, partial cds Length = 6505 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 855 ctgtgctgcctcctcaggaga 875 ||||||||||||||||||||| Sbjct: 3056 ctgtgctgcctcctcaggaga 3076 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 228,629,056 Number of extensions: 12093355 Number of successful extensions: 241271 Number of sequences better than 10.0: 109 Number of HSP's gapped: 241267 Number of HSP's successfully gapped: 179 Length of query: 1382 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1359 Effective length of database: 18,503,978,556 Effective search space: 25146906857604 Effective search space used: 25146906857604 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
