ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72l13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102414:Os02g0435000 | 579 | e-165 | 2 | AK060832:Os02g0435000 | 579 | e-165 | 3 | AK065454:Os07g0673200 | 31 | 1.8 | 4 | AK110026: | 30 | 3.1 | 5 | AK110091: | 30 | 4.0 | 6 | Os11g0592400:Os11g0592400 | 29 | 9.0 | 7 | Os09g0502800:Os09g0502800 | 29 | 9.0 | 8 | AK100087:Os02g0116300 | 29 | 9.0 | 9 | AK070691:Os02g0116300 | 29 | 9.0 | 10 | AK064404:Os02g0767200 | 29 | 9.0 |
|---|
>AK102414:Os02g0435000 | Length = 372 Score = 579 bits (1493), Expect = e-165 Identities = 277/300 (92%), Positives = 293/300 (97%) Frame = +3 Query: 171 SRSSRACSQEEPAPKKDVYQLFAEKVRDNKQLESRWAVMQETRVEYFRGKDFTSFIKNHP 350 SRSSRA SQE+PAP KDVYQLFAEKVRDNKQLESRWA+MQETRVEYFRGKDFT+F++NHP Sbjct: 25 SRSSRAGSQEKPAPNKDVYQLFAEKVRDNKQLESRWAIMQETRVEYFRGKDFTTFMRNHP 84 Query: 351 EVGEILGPDKDMEAEDIVNTLLIKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHQEQVFT 530 EV EILGPDKD+E EDIVNTLL KNLVIRCDRVWKTVRPGKKKLSSWPAHLEIH+EQVFT Sbjct: 85 EVREILGPDKDLEVEDIVNTLLSKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHREQVFT 144 Query: 531 ENDGFYAWMFLKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSL 710 ENDGF+AWMFLKRRTLWQTILSF+WP+FALAVCLFPVYPYQCKIVVLYSCAGALLFIVS+ Sbjct: 145 ENDGFFAWMFLKRRTLWQTILSFVWPLFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSI 204 Query: 711 LLLRAAIFGVLWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA 890 LLLRAAIFG+LWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA Sbjct: 205 LLLRAAIFGILWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA 264 Query: 891 LLVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMMDKHTEDNATETSNYTS 1070 +LVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMM+KHT NA+ETSN+TS Sbjct: 265 VLVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMMEKHTGTNASETSNHTS 324
>AK060832:Os02g0435000 | Length = 372 Score = 579 bits (1493), Expect = e-165 Identities = 277/300 (92%), Positives = 293/300 (97%) Frame = +3 Query: 171 SRSSRACSQEEPAPKKDVYQLFAEKVRDNKQLESRWAVMQETRVEYFRGKDFTSFIKNHP 350 SRSSRA SQE+PAP KDVYQLFAEKVRDNKQLESRWA+MQETRVEYFRGKDFT+F++NHP Sbjct: 25 SRSSRAGSQEKPAPNKDVYQLFAEKVRDNKQLESRWAIMQETRVEYFRGKDFTTFMRNHP 84 Query: 351 EVGEILGPDKDMEAEDIVNTLLIKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHQEQVFT 530 EV EILGPDKD+E EDIVNTLL KNLVIRCDRVWKTVRPGKKKLSSWPAHLEIH+EQVFT Sbjct: 85 EVREILGPDKDLEVEDIVNTLLSKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHREQVFT 144 Query: 531 ENDGFYAWMFLKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSL 710 ENDGF+AWMFLKRRTLWQTILSF+WP+FALAVCLFPVYPYQCKIVVLYSCAGALLFIVS+ Sbjct: 145 ENDGFFAWMFLKRRTLWQTILSFVWPLFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSI 204 Query: 711 LLLRAAIFGVLWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA 890 LLLRAAIFG+LWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA Sbjct: 205 LLLRAAIFGILWVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVA 264 Query: 891 LLVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMMDKHTEDNATETSNYTS 1070 +LVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMM+KHT NA+ETSN+TS Sbjct: 265 VLVILLLRHHAPDEAARARYQKKVSNIIDDVLEWSPKLALSGMMEKHTGTNASETSNHTS 324
>AK065454:Os07g0673200 | Length = 321 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +3 Query: 324 FTSFIKNHPEVGEILGPDKDMEAEDIVNTLLIKNLVIRCDRVWKTVRPGKKKLSSWPAHL 503 FTS K H G ++ KD+ I+N + ++ ++ + D++ + + + K + H+ Sbjct: 99 FTS--KGHKSHGALIQQGKDLVTYAIINAVAMRKILKKYDKIHYSKQGQEFKAQAQSLHI 156 Query: 504 EIHQEQVFTENDGFY 548 EI Q E FY Sbjct: 157 EILQSPWLCELMAFY 171
>AK110026: | Length = 1006 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 455 FPNSVTPYYKVFDKQGVNNIFSFHIFIR 372 FP+SV P+Y + DK+ SF IFIR Sbjct: 544 FPSSVRPFYAMEDKENPKVTNSFDIFIR 571
>AK110091: | Length = 1212 Score = 30.0 bits (66), Expect = 4.0 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = -1 Query: 886 TVA*KSLDVHFGRSPSSFSGQNR-TSSLNVVSSA--FILGKNHTRFPRRTHNTPKMAALN 716 +VA S+ +G PSS S + +SS ++VSSA I FPR + +T + Sbjct: 36 SVASSSVSTPYGGLPSSASSSSSASSSSSLVSSARRSISSTGRNSFPRASPSTTSLVKDQ 95 Query: 715 KSRDTINSKAPAQEYSTTILHWYG*TGNKQTANAKT 608 R A S + TG Q++NA++ Sbjct: 96 SPRSRSRRNGSASSSSLVLTRPDNATGIHQSSNAES 131
>Os11g0592400:Os11g0592400 | Length = 861 Score = 28.9 bits (63), Expect = 9.0 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -2 Query: 1161 ISFSYHQHLGFHLHPHPRLH 1102 IS S H HL HLH PRLH Sbjct: 8 ISPSIHLHLHLHLHHPPRLH 27
>Os09g0502800:Os09g0502800 | Length = 465 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = -1 Query: 481 NFFFPGLTVFQTRSHLITRFLISKVLTISSASISLSGPKISPT 353 NF+F G V T L T+FL K L SISLSG +SP+ Sbjct: 282 NFYFTGYKVVNTPM-LTTKFLYLKYL-----SISLSGLTVSPS 318
>AK100087:Os02g0116300 | Length = 683 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 559 FSKDGP-CGRRFFHLFGLSLHWRSAYFQFTHTN 654 F GP CG +FF FGL + +F FT N Sbjct: 219 FFASGPGCGFKFFPTFGLEAYKHGFFFDFTMAN 251
>AK070691:Os02g0116300 | Length = 683 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +1 Query: 559 FSKDGP-CGRRFFHLFGLSLHWRSAYFQFTHTN 654 F GP CG +FF FGL + +F FT N Sbjct: 219 FFASGPGCGFKFFPTFGLEAYKHGFFFDFTMAN 251
>AK064404:Os02g0767200 | Length = 482 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -1 Query: 328 VKSFPRKYSTRVSCMTAHLD-SSCLLSRTFSANNWYTSFFGAGSSWEQAREE 176 +K R Y +S M A L + L+ RT N+W +F G + W + +E+ Sbjct: 143 IKPEDRNYHAALSIMAAKLAYENELVVRTVVQNHWQMNFVGFYNCWNEFQED 194 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 38,858,737 Number of extensions: 870294 Number of successful extensions: 2077 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2076 Number of HSP's successfully gapped: 10 Length of query: 459 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 355 Effective length of database: 11,235,591 Effective search space: 3988634805 Effective search space used: 3988634805 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
