ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72l13 |
|---|---|
| Clone Library Name | barley_pub |
>Q5R4Q3:SEC62_PONPY Translocation protein SEC62 - Pongo pygmaeus (Orangutan)| Length = 399 Score = 65.9 bits (159), Expect = 4e-10 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 9/123 (7%) Frame = +3 Query: 453 KTVRPG--KKKLSSWPAHLEIHQEQVFTENDGFYAWMF--LKRRTLWQTILSFIWPVFAL 620 K PG KKK + LE H +QVF + + Y W++ + +T ++ I + + Sbjct: 152 KEETPGTPKKKETKKKFKLEPHDDQVFLDGNEVYVWIYDPVHFKTF---VMGLILVIAVI 208 Query: 621 AVCLFPVYPYQCKIVVLYSCAGALLFIVSLLLL---RAAIFGVLWVLLGKR--VWFFPNI 785 A LFP++P + ++ V Y GA F+ S+LLL R +F ++W++ G R WF PN+ Sbjct: 209 AATLFPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNL 268 Query: 786 NAE 794 A+ Sbjct: 269 TAD 271
>Q99442:SEC62_HUMAN Translocation protein SEC62 - Homo sapiens (Human)| Length = 399 Score = 65.9 bits (159), Expect = 4e-10 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 9/123 (7%) Frame = +3 Query: 453 KTVRPG--KKKLSSWPAHLEIHQEQVFTENDGFYAWMF--LKRRTLWQTILSFIWPVFAL 620 K PG KKK + LE H +QVF + + Y W++ + +T ++ I + + Sbjct: 152 KEETPGTPKKKETKKKFKLEPHDDQVFLDGNEVYVWIYDPVHFKTF---VMGLILVIAVI 208 Query: 621 AVCLFPVYPYQCKIVVLYSCAGALLFIVSLLLL---RAAIFGVLWVLLGKR--VWFFPNI 785 A LFP++P + ++ V Y GA F+ S+LLL R +F ++W++ G R WF PN+ Sbjct: 209 AATLFPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNL 268 Query: 786 NAE 794 A+ Sbjct: 269 TAD 271
>Q5F3A1:SEC62_CHICK Translocation protein SEC62 - Gallus gallus (Chicken)| Length = 398 Score = 64.7 bits (156), Expect = 9e-10 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%) Frame = +3 Query: 453 KTVRPG--KKKLSSWPAHLEIHQEQVFTENDGFYAWMF--LKRRTLWQTILSFIWPVFAL 620 K PG KKK + LE H++QVF + + Y W++ + +T + + + + Sbjct: 152 KDETPGTPKKKETKRKFKLEPHEDQVFLDGNEVYVWIYDPVHFKTF---AMGLVLVIAVI 208 Query: 621 AVCLFPVYPYQCKIVVLYSCAGALLFIVSLLLL---RAAIFGVLWVLLGKR--VWFFPNI 785 A LFP++P + ++ V Y GA F+ S+LLL R +F ++W++ G R WF PN+ Sbjct: 209 AATLFPLWPAEMRVGVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNL 268 Query: 786 NAE 794 A+ Sbjct: 269 TAD 271
>O13787:SEC62_SCHPO Translocation protein sec62 - Schizosaccharomyces pombe (Fission| yeast) Length = 273 Score = 64.3 bits (155), Expect = 1e-09 Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 19/232 (8%) Frame = +3 Query: 234 FAEKVRDNKQLESRWAVMQETRVEYFRGKDFTSFI----------KNHPEVGEILGPDKD 383 F ++ +L+++ A++ RV YFR K F+ K PE+ Sbjct: 21 FTNFLKSRPELKTKPAILNGKRVYYFRVKRVLRFLTSEAYTPKKYKGFPEISS------R 74 Query: 384 MEAEDIVNTLLIKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHQEQVFTENDGFYAWMF- 560 EA +++ L++ ++++R D++ R K+KL L+I++ Q F ++D Y W++ Sbjct: 75 EEAIEVLKLLIMNSMLVRVDKLPPKQR--KQKL----VELQINRNQDF-QDDMHYVWLYE 127 Query: 561 -LKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGAL----LFIVSLLLLRA 725 L +R + L+ ++ + LA+ LFP++P + Y G L LF V L++LR Sbjct: 128 PLPKRVM---ALAVLFALVVLALVLFPLWPMFMRKGAWYLSMGGLGVIGLFFV-LVILRF 183 Query: 726 AIFGVLWVLLGKRVWFFPNINAEE---TTFRELVRFWPEKDEGERPKWTSRL 872 +F + V++ +W FPN+ A+ +F+ L + K E ++ + + +L Sbjct: 184 FLFCITAVIVRPGIWLFPNLLADVGFCDSFKPLWSWHNSKSEVKKTRKSKKL 235
>Q8BU14:SEC62_MOUSE Translocation protein SEC62 - Mus musculus (Mouse)| Length = 398 Score = 64.3 bits (155), Expect = 1e-09 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%) Frame = +3 Query: 453 KTVRPG--KKKLSSWPAHLEIHQEQVFTENDGFYAWMF--LKRRTLWQTILSFIWPVFAL 620 K PG KKK + LE H +QVF + + + W++ + +T ++ I + + Sbjct: 152 KEETPGTPKKKETKKKFKLEPHDDQVFLDGNEVFVWIYDPVHIKTF---VMGLILVIAVI 208 Query: 621 AVCLFPVYPYQCKIVVLYSCAGALLFIVSLLLL---RAAIFGVLWVLLGKR--VWFFPNI 785 A LFP++P + ++ V Y GA F+ S+LLL R +F ++W++ G R WF PN+ Sbjct: 209 AATLFPLWPAEMRVGVYYLSVGAGCFVASILLLAIARCILFLIIWLITGGRHHFWFLPNL 268 Query: 786 NAE 794 A+ Sbjct: 269 TAD 271
>Q99161:SEC62_YARLI Translocation protein SEC62 - Yarrowia lipolytica (Candida| lipolytica) Length = 396 Score = 51.6 bits (122), Expect = 8e-06 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 17/218 (7%) Frame = +3 Query: 237 AEKVRDNKQLESRWAVMQETRVEYFRGKDFTSFIKNHPEVGEILG-PDKDM-------EA 392 A+ +R +K L+ R ++ R ++FR K +++ P+ ++ P+ + EA Sbjct: 30 ADYLRSHKLLKQRPGILNGKRSDFFRVKRAIRALED-PKYKQLQSKPNSKLPPINSRNEA 88 Query: 393 EDIVNTLLIKNLVIRCDRV-WKTVRPGKKKLSSWPAHLEIHQEQVFTENDGFYAWMFLKR 569 I + I + +R D++ +T K+K L+++ +Q F + D +Y W F Sbjct: 89 ISIFRLMPINQMALRVDKLPTQTALMMKQKPEQGVPVLQVNPQQEFGD-DMYYTW-FYNP 146 Query: 570 RTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGALLFI---VSLLLLRAAIFGV 740 L + + A LFP++P + V Y G L I + L+R IF + Sbjct: 147 VPLTTYLYGALGVAAIFAGVLFPLWPIFLRQGVWYLSVGMLGLIGVFFGIALVRLVIFVL 206 Query: 741 LWVLLGKRVWFFPNINAEETTFRELVRFW-----PEKD 839 W + +W FPN+ A+ + W PE+D Sbjct: 207 TWPTVKPGIWIFPNLFADVGFVDSFIPLWAWHGTPERD 244
>Q5AI21:SEC62_CANAL Translocation protein SEC62 - Candida albicans (Yeast)| Length = 293 Score = 44.3 bits (103), Expect = 0.001 Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 20/242 (8%) Frame = +3 Query: 192 SQEEPAPKKDVYQLFAEKVRDNKQLESRWAVMQETR-VEYFRGKDFTSFI--------KN 344 +Q P V LF N L+ R ++ T +E+FR K + + Sbjct: 18 AQRSPVAVNIVNYLF-----QNPILKQRTGLLDNTNDIEFFRFKRLQRALLSDDYKQKQQ 72 Query: 345 HPEVGEILGPDKDMEAEDIVNTLLIKNLVIRCDRVWKTVRPGKKKLSSWPAHLEI----H 512 +P+ G I P + E V LLI+N ++ + K K + W + E Sbjct: 73 NPKNGLI--PVANNEDVQKVFVLLIQNQLLL--PLQKLHYAEVKAVKGWKPNKEKPTLKR 128 Query: 513 QEQVFTENDGFYAWMFLKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGAL 692 ++ + D +Y W++ K + + SF+ AV LFP++P K V Y GAL Sbjct: 129 ADKAVMDPDVYYGWLYQKPNP-YILLYSFLAIAGVFAVILFPLWPNFMKRGVWYLSMGAL 187 Query: 693 LFIV---SLLLLRAAIFGVLWVLLGKRVWFFPNINAEETTFREL--VRFW--PEKDEGER 851 I + ++R I+ + V K W FPN+ + V W P+K +G++ Sbjct: 188 GLIALFFATAIVRLIIYIISLVAFPKPFWLFPNLFEDCGVIESFQPVYAWEEPKKKKGKK 247 Query: 852 PK 857 K Sbjct: 248 KK 249
>Q6BI99:SEC62_DEBHA Translocation protein SEC62 - Debaryomyces hansenii (Yeast)| (Torulaspora hansenii) Length = 278 Score = 43.9 bits (102), Expect = 0.002 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 16/199 (8%) Frame = +3 Query: 237 AEKVRDNKQLESRWAVMQETR-VEYFRGK---------DFTSFIKNHPEVGEILGPDKDM 386 A ++DNK L+ R ++ + VE+FR K D+ + NH ++ + Sbjct: 20 ANYLKDNKILKQRTGLLNNSEDVEFFRYKRLARALLSDDYKTKQANHKN--GLIPIADEQ 77 Query: 387 EAEDIVNTLLIKNLVIRCDRV-WKTVRPGKKKLSSWPAHLEIHQE-QVFTENDGFYAWMF 560 EA + TL+ VI +++ + ++ K + Q + E + ++ W + Sbjct: 78 EAAKVFITLIQSQFVIPVEKLHYNEIKQANKSWKPNKTKPTLKQSTKANIEPNAYFVWTY 137 Query: 561 LKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGAL----LFIVSLLLLRAA 728 K + + S + V + LFP++P KI V Y G L LF + + ++R Sbjct: 138 NKPNP-FILLYSILLLVGIFTIILFPLWPNFMKIGVWYLSMGLLGLLGLFFL-IAIIRLI 195 Query: 729 IFGVLWVLLGKRVWFFPNI 785 I+ + ++L + W +PN+ Sbjct: 196 IYIITLLVLPRAFWLYPNL 214
>Q9KYR6:SYP_STRCO Prolyl-tRNA synthetase - Streptomyces coelicolor| Length = 567 Score = 34.3 bits (77), Expect = 1.3 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Frame = +1 Query: 988 SGLRSWLCLG*WI--NILRIMRQKLAITPA----MPQ*LPKNPQMQTRMWMQMKPKVLMI 1149 +GL SWL LG + NI RI+R+++ A +P LP+ P T W + P++ + Sbjct: 43 AGLWSWLPLGKKVLGNIERIVREEMDAIGAQEVQLPALLPREPYEATGRWQEYGPELFRL 102 Query: 1150 RER 1158 ++R Sbjct: 103 QDR 105
>Q10287:BGS1_SCHPO 1,3-beta-glucan synthase component bgs1 - Schizosaccharomyces pombe| (Fission yeast) Length = 1729 Score = 33.9 bits (76), Expect = 1.6 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Frame = -3 Query: 1079 CGMAGVIASFCRI--ILSMFIHHPRQ-SQLRRPLKDIINYIRNLLLVPRSSCFIWSVMSK 909 CG+AG IASF + ++ +IH PR+ RR ++ I LLL FI++ +K Sbjct: 381 CGLAGAIASFITLAAVVFEYIHVPRRYHSARRLWPSMLLLISTLLLNIAPVVFIFASSTK 440 Query: 908 QQYH 897 +Q++ Sbjct: 441 EQHY 444
>P04540:NU5M_TRYBB NADH-ubiquinone oxidoreductase chain 5 - Trypanosoma brucei brucei| Length = 590 Score = 33.1 bits (74), Expect = 2.8 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Frame = +3 Query: 591 LSFIWPVFALAVCLFPVYPYQCKIVV----LYSCAGALLFIVSLLLL 719 L F++ F L CLF ++ Y+C +V LY C ++ FI+ + + Sbjct: 433 LMFVFKCFCLVDCLFLLFDYECCLVYCLISLYMCILSIFFIIDFVCI 479
>Q2GDR7:HTPG_NEOSM Chaperone protein htpG - Neorickettsia sennetsu (strain Miyayama)| Length = 620 Score = 32.7 bits (73), Expect = 3.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = +3 Query: 285 MQETRVEYFRGKDFTSFIKNHPEVGEILGPDKDMEAEDIVNTLLIKNLVIRCDRVWKTVR 464 M E + + R K +HP +G+I+G E ED++ L + +++ D V VR Sbjct: 549 MLEQKQLHSRSKKILEINASHPVIGKIIGKVDSPEVEDLIFLLYDQACILQGDEVRNPVR 608 Query: 465 PGK 473 K Sbjct: 609 MSK 611
>P94367:CYDD_BACSU ATP-binding/permease protein cydD - Bacillus subtilis| Length = 575 Score = 32.7 bits (73), Expect = 3.7 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 1/133 (0%) Frame = +3 Query: 540 GFYAWMFLKRRTLWQTILSFIWPVFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSLLLL 719 GF++W F L+ +L ++PV +L V + VLYS L Sbjct: 153 GFFSWPFAILLALYLFVLVVLFPVVSLLVTRAKNAKLKSGRNVLYS------------RL 200 Query: 720 RAAIFGVL-WVLLGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVALL 896 A+ GV W+ G+R F EE + EL E+ + +W VA L Sbjct: 201 TDAVMGVSDWMFSGRRHAFIDAYEKEERDWFEL-----ERKKQRFTRWRDFAAQCLVAGL 255 Query: 897 VILLLRHHAPDEA 935 ++L+L A +A Sbjct: 256 ILLMLFWTAGQQA 268
>Q9FJ30:FBL88_ARATH Putative F-box/LRR-repeat protein At5g41840 - Arabidopsis thaliana| (Mouse-ear cress) Length = 540 Score = 32.0 bits (71), Expect = 6.2 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Frame = +3 Query: 771 FFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVALLVILLLRHHAPDEAARARY 950 F PN+N +++ + F P R K++ Y + V +L A + R+ Sbjct: 52 FVPNLNFDDSIY-----FHPR---ARRNKYSKS--YESFMSFVDSVLALQAKTKTPLKRF 101 Query: 951 QKKVSNIIDD--VLEWSPKLALSGMMDKHTEDNATETSNYTSHAT 1079 K +++D VLEW PK+ G++D + + T + NY +++ Sbjct: 102 HVKCEDVVDQSWVLEWIPKVLKRGVLD--IDLHITSSRNYCENSS 144
>Q1H497:SYP_METFK Prolyl-tRNA synthetase - Methylobacillus flagellatus (strain KT /| ATCC 51484 / DSM 6875) Length = 573 Score = 32.0 bits (71), Expect = 6.3 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 8/65 (12%) Frame = +1 Query: 988 SGLRSWLCLG*WINILR----IMRQKL----AITPAMPQ*LPKNPQMQTRMWMQMKPKVL 1143 SGL SW+ LG + +LR I+R+++ A+ MP PK +T W P++L Sbjct: 37 SGLYSWMPLG--LRVLRKVETIVREEMNRAGALELLMPAVQPKELWEETGRWAVFGPQML 94 Query: 1144 MIRER 1158 IR+R Sbjct: 95 KIRDR 99
>O95427:PIGN_HUMAN GPI ethanolamine phosphate transferase 1 - Homo sapiens (Human)| Length = 931 Score = 31.6 bits (70), Expect = 8.1 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +3 Query: 543 FYAWMFLKRRTLWQTILSFIWPVFALAVCLFPVYPY--QCKIVVLYSCAGALLFIVSLLL 716 F AW FL R + S W F+L + +FP+ P + + L AG L+ ++SL + Sbjct: 575 FAAWPFLTRLWTRAKMTSLSWTFFSLLLAVFPLMPVVGRKPDISLVMGAGLLVLLLSLCV 634 Query: 717 L 719 + Sbjct: 635 V 635 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 242,850,555 Number of extensions: 5371258 Number of successful extensions: 13639 Number of sequences better than 10.0: 16 Number of HSP's gapped: 13620 Number of HSP's successfully gapped: 16 Length of query: 459 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 342 Effective length of database: 68,593,924 Effective search space: 23459122008 Effective search space used: 23459122008 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
