| Clone Name | FLbaf72l13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001053267.1| Oryza sativa (japonica cultivar-group) Os02g0435000 (Os02g0435000) mRNA, complete cds Length = 1758 Score = 1047 bits (528), Expect = 0.0 Identities = 870/984 (88%) Strand = Plus / Plus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 455 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 514 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccaggaggagcc 205 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||||| |||| Sbjct: 515 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccaggagaagcc 574 Query: 206 agctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggataacaagcagct 265 ||||||||| || ||||| |||||| | ||||||||||||||| |||||||||||||||| Sbjct: 575 agctccaaacaaggatgtttaccaactatttgctgagaaggttagggataacaagcagct 634 Query: 266 ggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtggaaaagattt 325 |||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 635 ggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtggaaaagattt 694 Query: 326 tactagtttcatcaagaatcatccagaagttggggaaattttagggccggataaagatat 385 ||||| ||||| | |||||||||||||||| |||||||||||||||| ||||||||| | Sbjct: 695 tactaccttcatgaggaatcatccagaagttagggaaattttagggccagataaagattt 754 Query: 386 ggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataaggtgtgaccg 445 |||| ||||| ||||||||||| |||| | ||| |||||||| |||||||||||||| Sbjct: 755 agaagtggaagacattgttaacactctgctgagcaagaaccttgtgataaggtgtgaccg 814 Query: 446 agtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctgctcatttgga 505 ||||||||||||||| |||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 815 agtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctgcacatttgga 874 Query: 506 gatacatcaggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaa 565 |||||||| |||||||| |||||||| |||||||| |||| |||||||||||||||||| Sbjct: 875 gatacatcgtgaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaa 934 Query: 566 aagacggaccttgtggcagacgattctttcatttatttggcctgtctttgcattggcggt 625 ||| ||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || Sbjct: 935 aaggaggaccttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagt 994 Query: 626 ctgcttatttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctgg 685 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 995 ttgcttatttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctgg 1054 Query: 686 agccttactgtttatcgtatccctgcttttattaagagctgccatctttggcgtattatg 745 ||| ||| |||| || || || | ||||| ||||||||||| ||||||||| || |||| Sbjct: 1055 agctttattgttcattgtctctattcttttgttaagagctgctatctttggcatactatg 1114 Query: 746 ggttcttcttggaaaacgggtgtggttcttccccaatataaatgcagaggagaccacatt 805 ||| || ||||| ||||| ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 1115 ggtactccttgggaaacgtgtgtggttctttccaaatataaatgccgaagagacaacatt 1174 Query: 806 tagagaactcgttcggttttggcctgagaaggatgagggagagcgaccaaagtggacgtc 865 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1175 tagagaacttgttcggttttggcccgagaaggatgagggagagcgaccaaagtggacatc 1234 Query: 866 aagacttttctatgctactgttgccttattggtgatattgctgcttagacatcacgctcc 925 |||||| |||||||| |||||||| ||||||||||||| ||||| || || || ||||| Sbjct: 1235 aagactcttctatgccactgttgctgtattggtgatattactgctcaggcaccatgctcc 1294 Query: 926 agatgaagcagctagagcgaggtaccaaaagaaggtttctaatataattgatgatgtcct 985 ||||||||||||||| || |||||||| ||||||||||| || |||||||||||||| || Sbjct: 1295 agatgaagcagctagggcaaggtaccagaagaaggtttcgaacataattgatgatgttct 1354 Query: 986 tgagtggtctccgaagttggctttgtctgggatgatggataaacatactgaggataatgc 1045 |||||||||||| ||||| |||||||||||||||||||| |||||||||| | |||||| Sbjct: 1355 tgagtggtctccaaagttagctttgtctgggatgatggaaaaacatactgggactaatgc 1414 Query: 1046 gacagaaactagcaattacaccag 1069 |||||||||||||| ||||||| Sbjct: 1415 atcagaaactagcaatcacaccag 1438
>dbj|AK102414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093B11, full insert sequence Length = 1760 Score = 1047 bits (528), Expect = 0.0 Identities = 870/984 (88%) Strand = Plus / Plus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 457 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 516 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccaggaggagcc 205 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||||| |||| Sbjct: 517 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccaggagaagcc 576 Query: 206 agctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggataacaagcagct 265 ||||||||| || ||||| |||||| | ||||||||||||||| |||||||||||||||| Sbjct: 577 agctccaaacaaggatgtttaccaactatttgctgagaaggttagggataacaagcagct 636 Query: 266 ggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtggaaaagattt 325 |||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 637 ggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtggaaaagattt 696 Query: 326 tactagtttcatcaagaatcatccagaagttggggaaattttagggccggataaagatat 385 ||||| ||||| | |||||||||||||||| |||||||||||||||| ||||||||| | Sbjct: 697 tactaccttcatgaggaatcatccagaagttagggaaattttagggccagataaagattt 756 Query: 386 ggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataaggtgtgaccg 445 |||| ||||| ||||||||||| |||| | ||| |||||||| |||||||||||||| Sbjct: 757 agaagtggaagacattgttaacactctgctgagcaagaaccttgtgataaggtgtgaccg 816 Query: 446 agtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctgctcatttgga 505 ||||||||||||||| |||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 817 agtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctgcacatttgga 876 Query: 506 gatacatcaggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaa 565 |||||||| |||||||| |||||||| |||||||| |||| |||||||||||||||||| Sbjct: 877 gatacatcgtgaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaa 936 Query: 566 aagacggaccttgtggcagacgattctttcatttatttggcctgtctttgcattggcggt 625 ||| ||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || Sbjct: 937 aaggaggaccttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagt 996 Query: 626 ctgcttatttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctgg 685 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 997 ttgcttatttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctgg 1056 Query: 686 agccttactgtttatcgtatccctgcttttattaagagctgccatctttggcgtattatg 745 ||| ||| |||| || || || | ||||| ||||||||||| ||||||||| || |||| Sbjct: 1057 agctttattgttcattgtctctattcttttgttaagagctgctatctttggcatactatg 1116 Query: 746 ggttcttcttggaaaacgggtgtggttcttccccaatataaatgcagaggagaccacatt 805 ||| || ||||| ||||| ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 1117 ggtactccttgggaaacgtgtgtggttctttccaaatataaatgccgaagagacaacatt 1176 Query: 806 tagagaactcgttcggttttggcctgagaaggatgagggagagcgaccaaagtggacgtc 865 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1177 tagagaacttgttcggttttggcccgagaaggatgagggagagcgaccaaagtggacatc 1236 Query: 866 aagacttttctatgctactgttgccttattggtgatattgctgcttagacatcacgctcc 925 |||||| |||||||| |||||||| ||||||||||||| ||||| || || || ||||| Sbjct: 1237 aagactcttctatgccactgttgctgtattggtgatattactgctcaggcaccatgctcc 1296 Query: 926 agatgaagcagctagagcgaggtaccaaaagaaggtttctaatataattgatgatgtcct 985 ||||||||||||||| || |||||||| ||||||||||| || |||||||||||||| || Sbjct: 1297 agatgaagcagctagggcaaggtaccagaagaaggtttcgaacataattgatgatgttct 1356 Query: 986 tgagtggtctccgaagttggctttgtctgggatgatggataaacatactgaggataatgc 1045 |||||||||||| ||||| |||||||||||||||||||| |||||||||| | |||||| Sbjct: 1357 tgagtggtctccaaagttagctttgtctgggatgatggaaaaacatactgggactaatgc 1416 Query: 1046 gacagaaactagcaattacaccag 1069 |||||||||||||| ||||||| Sbjct: 1417 atcagaaactagcaatcacaccag 1440
>dbj|AK060832.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C06, full insert sequence Length = 1526 Score = 1047 bits (528), Expect = 0.0 Identities = 870/984 (88%) Strand = Plus / Plus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 295 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 354 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccaggaggagcc 205 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||||| |||| Sbjct: 355 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccaggagaagcc 414 Query: 206 agctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggataacaagcagct 265 ||||||||| || ||||| |||||| | ||||||||||||||| |||||||||||||||| Sbjct: 415 agctccaaacaaggatgtttaccaactatttgctgagaaggttagggataacaagcagct 474 Query: 266 ggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtggaaaagattt 325 |||||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 475 ggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtggaaaagattt 534 Query: 326 tactagtttcatcaagaatcatccagaagttggggaaattttagggccggataaagatat 385 ||||| ||||| | |||||||||||||||| |||||||||||||||| ||||||||| | Sbjct: 535 tactaccttcatgaggaatcatccagaagttagggaaattttagggccagataaagattt 594 Query: 386 ggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataaggtgtgaccg 445 |||| ||||| ||||||||||| |||| | ||| |||||||| |||||||||||||| Sbjct: 595 agaagtggaagacattgttaacactctgctgagcaagaaccttgtgataaggtgtgaccg 654 Query: 446 agtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctgctcatttgga 505 ||||||||||||||| |||||||||||||| || || ||||| |||||||| |||||||| Sbjct: 655 agtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctgcacatttgga 714 Query: 506 gatacatcaggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaa 565 |||||||| |||||||| |||||||| |||||||| |||| |||||||||||||||||| Sbjct: 715 gatacatcgtgaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaa 774 Query: 566 aagacggaccttgtggcagacgattctttcatttatttggcctgtctttgcattggcggt 625 ||| ||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || Sbjct: 775 aaggaggaccttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagt 834 Query: 626 ctgcttatttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctgg 685 ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| Sbjct: 835 ttgcttatttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctgg 894 Query: 686 agccttactgtttatcgtatccctgcttttattaagagctgccatctttggcgtattatg 745 ||| ||| |||| || || || | ||||| ||||||||||| ||||||||| || |||| Sbjct: 895 agctttattgttcattgtctctattcttttgttaagagctgctatctttggcatactatg 954 Query: 746 ggttcttcttggaaaacgggtgtggttcttccccaatataaatgcagaggagaccacatt 805 ||| || ||||| ||||| ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 955 ggtactccttgggaaacgtgtgtggttctttccaaatataaatgccgaagagacaacatt 1014 Query: 806 tagagaactcgttcggttttggcctgagaaggatgagggagagcgaccaaagtggacgtc 865 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1015 tagagaacttgttcggttttggcccgagaaggatgagggagagcgaccaaagtggacatc 1074 Query: 866 aagacttttctatgctactgttgccttattggtgatattgctgcttagacatcacgctcc 925 |||||| |||||||| |||||||| ||||||||||||| ||||| || || || ||||| Sbjct: 1075 aagactcttctatgccactgttgctgtattggtgatattactgctcaggcaccatgctcc 1134 Query: 926 agatgaagcagctagagcgaggtaccaaaagaaggtttctaatataattgatgatgtcct 985 ||||||||||||||| || |||||||| ||||||||||| || |||||||||||||| || Sbjct: 1135 agatgaagcagctagggcaaggtaccagaagaaggtttcgaacataattgatgatgttct 1194 Query: 986 tgagtggtctccgaagttggctttgtctgggatgatggataaacatactgaggataatgc 1045 |||||||||||| ||||| |||||||||||||||||||| |||||||||| | |||||| Sbjct: 1195 tgagtggtctccaaagttagctttgtctgggatgatggaaaaacatactgggactaatgc 1254 Query: 1046 gacagaaactagcaattacaccag 1069 |||||||||||||| ||||||| Sbjct: 1255 atcagaaactagcaatcacaccag 1278
>gb|AY104674.1| Zea mays PCO111827 mRNA sequence Length = 1370 Score = 801 bits (404), Expect = 0.0 Identities = 799/931 (85%), Gaps = 6/931 (0%) Strand = Plus / Plus Query: 97 agatggcagggaagggagccaaggcgacggccgccaaggcggcggagaaggaaaagggga 156 ||||||| ||||||||||||||||| |||||||||||| ||||||| ||||| ||||||| Sbjct: 98 agatggcggggaagggagccaaggccacggccgccaagtcggcggacaaggacaagggga 157 Query: 157 agaaggcc------cccgcctcccgttcctcccgtgcctgttcccaggaggagccagctc 210 ||||| || |||| ||| || |||||||| ||| |||| ||| || |||||| Sbjct: 158 agaagaccggcggccccgtctcgcgctcctcccgcgccgcaccccatgagaagtcagctc 217 Query: 211 caaagaaagatgtgtaccaattgtttgctgagaaggttcgggataacaagcagctggaat 270 | ||||||||||| || |||||||||||||||||||| |||||||||| || ||||||| Sbjct: 218 cgaagaaagatgtttatcaattgtttgctgagaaggtcagggataacaaacaactggaat 277 Query: 271 cgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtggaaaagattttacta 330 | |||||||| ||||||||||||| ||||| |||||||| |||||||||||||| | || Sbjct: 278 caagatgggcgatcatgcaagaaacccgcgtggagtatttccgtggaaaagatttcaata 337 Query: 331 gtttcatcaagaatcatccagaagttggggaaattttagggccggataaagatatggaag 390 ||| |||| |||||||||||||| |||||||||| ||||| ||||| ||| | || | Sbjct: 338 ccttcgtcaaaaatcatccagaagtcagggaaattttggggccagataaggatttagagg 397 Query: 391 ctgaagatattgttaacaccttgcttatcaaaaaccttgtaataaggtgtgaccgagttt 450 ||||| ||||||||||| ||||| | ||| |||||||| ||||||||||| ||||| Sbjct: 398 tggaagacattgttaacactttgctgaccaagaaccttgtgataaggtgtgatcgagtca 457 Query: 451 ggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctgctcatttggagatac 510 |||||||||||| || || ||||||||| |||| || |||||||||||||||||||||| Sbjct: 458 tgaaaactgtgaggcctggcaagaaaaagctatcgtcatggcctgctcatttggagatac 517 Query: 511 atcaggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaaaagac 570 || | |||||||| || |||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 518 ataatgaacaagtgtttactgaaaatgatgggttttttgcttggatgtttctgaaaagaa 577 Query: 571 ggaccttgtggcagacgattctttcatttatttggcctgtctttgcattggcggtctgct 630 |||||||||||||||| |||||||||||| |||||||| | |||||| |||| ||||||| Sbjct: 578 ggaccttgtggcagacaattctttcatttgtttggcctctttttgcactggcagtctgct 637 Query: 631 tatttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctggagcct 690 |||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||| Sbjct: 638 tatttccagtttacccataccagtgcaagattgttgtactgtactcatgtgctggagctc 697 Query: 691 tactgtttatcgtatccctgcttttattaagagctgccatctttggcgtattatgggttc 750 |||| || || || ||| | ||||| |||||||||| |||||||| | ||||||||| Sbjct: 698 tacttttcattgtctccattcttttgctaagagctgctatctttggtatcctatgggttc 757 Query: 751 ttcttggaaaacgggtgtggttcttccccaatataaatgcagaggagaccacatttagag 810 | ||||| ||||| |||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 758 tccttgggaaacgcgtgtggttcttccccaatataaatgcggaggagacaacttttagag 817 Query: 811 aactcgttcggttttggcctgagaaggatgagggagagcgaccaaagtggacgtcaagac 870 |||||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 818 aactcgttcgtttttggcctgaaaaggatgaaggagagcggccaaagtggacatcaagac 877 Query: 871 ttttctatgctactgttgccttattggtgatattgctgcttagacatcacgctccagatg 930 |||||||||| |||||| ||||||||||||| |||||||| ||||| ||||| || | Sbjct: 878 ttttctatgcccttgttgctctattggtgatattactgcttaggcatcatgctcctgacg 937 Query: 931 aagcagctagagcgaggtaccaaaagaaggtttctaatataattgatgatgtccttgagt 990 ||||||||||||| ||||||||||||||||||||||| ||||| ||||| || ||||| | Sbjct: 938 aagcagctagagccaggtaccaaaagaaggtttctaacataatcgatgacgttcttgaat 997 Query: 991 ggtctccgaagttggctttgtctgggatgat 1021 ||||||||||||| ||| | ||||| ||||| Sbjct: 998 ggtctccgaagttagctatttctggaatgat 1028
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 345 bits (174), Expect = 3e-91 Identities = 282/318 (88%) Strand = Plus / Minus Query: 196 aggaggagccagctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggata 255 ||||| ||||||||||||| || ||||| |||||| | ||||||||||||||| |||||| Sbjct: 13946280 aggagaagccagctccaaacaaggatgtttaccaactatttgctgagaaggttagggata 13946221 Query: 256 acaagcagctggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtg 315 |||||||||||||||| |||||||| | |||||||||||||| ||||||||||| |||| Sbjct: 13946220 acaagcagctggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtg 13946161 Query: 316 gaaaagattttactagtttcatcaagaatcatccagaagttggggaaattttagggccgg 375 ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 13946160 gaaaagattttactaccttcatgaggaatcatccagaagttagggaaattttagggccag 13946101 Query: 376 ataaagatatggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataa 435 |||||||| | |||| ||||| ||||||||||| |||| | ||| |||||||| |||| Sbjct: 13946100 ataaagatttagaagtggaagacattgttaacactctgctgagcaagaaccttgtgataa 13946041 Query: 436 ggtgtgaccgagtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctg 495 ||||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||| Sbjct: 13946040 ggtgtgaccgagtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctg 13945981 Query: 496 ctcatttggagatacatc 513 | |||||||||||||||| Sbjct: 13945980 cacatttggagatacatc 13945963 Score = 254 bits (128), Expect = 7e-64 Identities = 206/232 (88%) Strand = Plus / Minus Query: 718 taagagctgccatctttggcgtattatgggttcttcttggaaaacgggtgtggttcttcc 777 |||||||||| ||||||||| || ||||||| || ||||| ||||| ||||||||||| | Sbjct: 13942509 taagagctgctatctttggcatactatgggtactccttgggaaacgtgtgtggttctttc 13942450 Query: 778 ccaatataaatgcagaggagaccacatttagagaactcgttcggttttggcctgagaagg 837 | ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 13942449 caaatataaatgccgaagagacaacatttagagaacttgttcggttttggcccgagaagg 13942390 Query: 838 atgagggagagcgaccaaagtggacgtcaagacttttctatgctactgttgccttattgg 897 ||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 13942389 atgagggagagcgaccaaagtggacatcaagactcttctatgccactgttgctgtattgg 13942330 Query: 898 tgatattgctgcttagacatcacgctccagatgaagcagctagagcgaggta 949 ||||||| ||||| || || || |||||||||||||||||||| || ||||| Sbjct: 13942329 tgatattactgctcaggcaccatgctccagatgaagcagctagggcaaggta 13942278 Score = 224 bits (113), Expect = 7e-55 Identities = 167/185 (90%) Strand = Plus / Minus Query: 513 caggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaaaagacgg 572 ||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||| || Sbjct: 13945479 caggaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaaaaggagg 13945420 Query: 573 accttgtggcagacgattctttcatttatttggcctgtctttgcattggcggtctgctta 632 ||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || |||||| Sbjct: 13945419 accttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagtttgctta 13945360 Query: 633 tttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctggagcctta 692 ||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||| Sbjct: 13945359 tttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctggagcttta 13945300 Query: 693 ctgtt 697 |||| Sbjct: 13945299 ttgtt 13945295 Score = 145 bits (73), Expect = 5e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 945 aggtaccaaaagaaggtttctaatataattgatgatgtccttgagtggtctccgaagttg 1004 |||||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 13940855 aggtaccagaagaaggtttcgaacataattgatgatgttcttgagtggtctccaaagtta 13940796 Query: 1005 gctttgtctgggatgatggataaacatactgaggataatgcgacagaaactagcaattac 1064 |||||||||||||||||||| |||||||||| | |||||| |||||||||||||| || Sbjct: 13940795 gctttgtctgggatgatggaaaaacatactgggactaatgcatcagaaactagcaatcac 13940736 Query: 1065 accag 1069 ||||| Sbjct: 13940735 accag 13940731 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 13947432 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 13947373 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccagg 198 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||| Sbjct: 13947372 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccagg 13947320
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 345 bits (174), Expect = 3e-91 Identities = 282/318 (88%) Strand = Plus / Minus Query: 196 aggaggagccagctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggata 255 ||||| ||||||||||||| || ||||| |||||| | ||||||||||||||| |||||| Sbjct: 118178 aggagaagccagctccaaacaaggatgtttaccaactatttgctgagaaggttagggata 118119 Query: 256 acaagcagctggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtg 315 |||||||||||||||| |||||||| | |||||||||||||| ||||||||||| |||| Sbjct: 118118 acaagcagctggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtg 118059 Query: 316 gaaaagattttactagtttcatcaagaatcatccagaagttggggaaattttagggccgg 375 ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 118058 gaaaagattttactaccttcatgaggaatcatccagaagttagggaaattttagggccag 117999 Query: 376 ataaagatatggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataa 435 |||||||| | |||| ||||| ||||||||||| |||| | ||| |||||||| |||| Sbjct: 117998 ataaagatttagaagtggaagacattgttaacactctgctgagcaagaaccttgtgataa 117939 Query: 436 ggtgtgaccgagtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctg 495 ||||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||| Sbjct: 117938 ggtgtgaccgagtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctg 117879 Query: 496 ctcatttggagatacatc 513 | |||||||||||||||| Sbjct: 117878 cacatttggagatacatc 117861 Score = 254 bits (128), Expect = 7e-64 Identities = 206/232 (88%) Strand = Plus / Minus Query: 718 taagagctgccatctttggcgtattatgggttcttcttggaaaacgggtgtggttcttcc 777 |||||||||| ||||||||| || ||||||| || ||||| ||||| ||||||||||| | Sbjct: 114407 taagagctgctatctttggcatactatgggtactccttgggaaacgtgtgtggttctttc 114348 Query: 778 ccaatataaatgcagaggagaccacatttagagaactcgttcggttttggcctgagaagg 837 | ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 114347 caaatataaatgccgaagagacaacatttagagaacttgttcggttttggcccgagaagg 114288 Query: 838 atgagggagagcgaccaaagtggacgtcaagacttttctatgctactgttgccttattgg 897 ||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 114287 atgagggagagcgaccaaagtggacatcaagactcttctatgccactgttgctgtattgg 114228 Query: 898 tgatattgctgcttagacatcacgctccagatgaagcagctagagcgaggta 949 ||||||| ||||| || || || |||||||||||||||||||| || ||||| Sbjct: 114227 tgatattactgctcaggcaccatgctccagatgaagcagctagggcaaggta 114176 Score = 224 bits (113), Expect = 7e-55 Identities = 167/185 (90%) Strand = Plus / Minus Query: 513 caggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaaaagacgg 572 ||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||| || Sbjct: 117377 caggaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaaaaggagg 117318 Query: 573 accttgtggcagacgattctttcatttatttggcctgtctttgcattggcggtctgctta 632 ||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || |||||| Sbjct: 117317 accttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagtttgctta 117258 Query: 633 tttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctggagcctta 692 ||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||| Sbjct: 117257 tttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctggagcttta 117198 Query: 693 ctgtt 697 |||| Sbjct: 117197 ttgtt 117193 Score = 145 bits (73), Expect = 5e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 945 aggtaccaaaagaaggtttctaatataattgatgatgtccttgagtggtctccgaagttg 1004 |||||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 112753 aggtaccagaagaaggtttcgaacataattgatgatgttcttgagtggtctccaaagtta 112694 Query: 1005 gctttgtctgggatgatggataaacatactgaggataatgcgacagaaactagcaattac 1064 |||||||||||||||||||| |||||||||| | |||||| |||||||||||||| || Sbjct: 112693 gctttgtctgggatgatggaaaaacatactgggactaatgcatcagaaactagcaatcac 112634 Query: 1065 accag 1069 ||||| Sbjct: 112633 accag 112629 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 119330 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 119271 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccagg 198 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||| Sbjct: 119270 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccagg 119218
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B05 Length = 117057 Score = 345 bits (174), Expect = 3e-91 Identities = 282/318 (88%) Strand = Plus / Minus Query: 196 aggaggagccagctccaaagaaagatgtgtaccaattgtttgctgagaaggttcgggata 255 ||||| ||||||||||||| || ||||| |||||| | ||||||||||||||| |||||| Sbjct: 15918 aggagaagccagctccaaacaaggatgtttaccaactatttgctgagaaggttagggata 15859 Query: 256 acaagcagctggaatcgagatgggctgtcatgcaagaaactcgcgttgagtattttcgtg 315 |||||||||||||||| |||||||| | |||||||||||||| ||||||||||| |||| Sbjct: 15858 acaagcagctggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtg 15799 Query: 316 gaaaagattttactagtttcatcaagaatcatccagaagttggggaaattttagggccgg 375 ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||| | Sbjct: 15798 gaaaagattttactaccttcatgaggaatcatccagaagttagggaaattttagggccag 15739 Query: 376 ataaagatatggaagctgaagatattgttaacaccttgcttatcaaaaaccttgtaataa 435 |||||||| | |||| ||||| ||||||||||| |||| | ||| |||||||| |||| Sbjct: 15738 ataaagatttagaagtggaagacattgttaacactctgctgagcaagaaccttgtgataa 15679 Query: 436 ggtgtgaccgagtttggaaaactgtgagaccaggaaagaaaaagttatcatcctggcctg 495 ||||||||||||||||||||||||| |||||||||||||| || || ||||| ||||||| Sbjct: 15678 ggtgtgaccgagtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctg 15619 Query: 496 ctcatttggagatacatc 513 | |||||||||||||||| Sbjct: 15618 cacatttggagatacatc 15601 Score = 254 bits (128), Expect = 7e-64 Identities = 206/232 (88%) Strand = Plus / Minus Query: 718 taagagctgccatctttggcgtattatgggttcttcttggaaaacgggtgtggttcttcc 777 |||||||||| ||||||||| || ||||||| || ||||| ||||| ||||||||||| | Sbjct: 12147 taagagctgctatctttggcatactatgggtactccttgggaaacgtgtgtggttctttc 12088 Query: 778 ccaatataaatgcagaggagaccacatttagagaactcgttcggttttggcctgagaagg 837 | ||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 12087 caaatataaatgccgaagagacaacatttagagaacttgttcggttttggcccgagaagg 12028 Query: 838 atgagggagagcgaccaaagtggacgtcaagacttttctatgctactgttgccttattgg 897 ||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||| Sbjct: 12027 atgagggagagcgaccaaagtggacatcaagactcttctatgccactgttgctgtattgg 11968 Query: 898 tgatattgctgcttagacatcacgctccagatgaagcagctagagcgaggta 949 ||||||| ||||| || || || |||||||||||||||||||| || ||||| Sbjct: 11967 tgatattactgctcaggcaccatgctccagatgaagcagctagggcaaggta 11916 Score = 224 bits (113), Expect = 7e-55 Identities = 167/185 (90%) Strand = Plus / Minus Query: 513 caggaacaagtattcactgaaaatgatggtttttatgcttggatgtttctcaaaagacgg 572 ||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||| || Sbjct: 15117 caggaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaaaaggagg 15058 Query: 573 accttgtggcagacgattctttcatttatttggcctgtctttgcattggcggtctgctta 632 ||||||||||| ||||||||||||||| |||||||| ||||||| ||||| || |||||| Sbjct: 15057 accttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagtttgctta 14998 Query: 633 tttccagtttacccataccaatgcaagattgtggtactgtactcttgcgctggagcctta 692 ||||||||||||||||||||||||||||||||||| ||||||| || |||||||| ||| Sbjct: 14997 tttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctggagcttta 14938 Query: 693 ctgtt 697 |||| Sbjct: 14937 ttgtt 14933 Score = 145 bits (73), Expect = 5e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 945 aggtaccaaaagaaggtttctaatataattgatgatgtccttgagtggtctccgaagttg 1004 |||||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||| Sbjct: 10493 aggtaccagaagaaggtttcgaacataattgatgatgttcttgagtggtctccaaagtta 10434 Query: 1005 gctttgtctgggatgatggataaacatactgaggataatgcgacagaaactagcaattac 1064 |||||||||||||||||||| |||||||||| | |||||| |||||||||||||| || Sbjct: 10433 gctttgtctgggatgatggaaaaacatactgggactaatgcatcagaaactagcaatcac 10374 Query: 1065 accag 1069 ||||| Sbjct: 10373 accag 10369 Score = 129 bits (65), Expect = 3e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 86 cggggcggcggagatggcagggaagggagccaaggcgacggccgccaaggcggcggagaa 145 ||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct: 17070 cggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaa 17011 Query: 146 ggaaaaggggaagaaggcccccgcctcccgttcctcccgtgcctgttcccagg 198 ||||||||||||||||||||||| ||||| || ||||| ||| | ||||||| Sbjct: 17010 ggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccagg 16958
>emb|CT834195.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA023J22, full insert sequence Length = 807 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 221 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 280 Query: 181 cccg 184 |||| Sbjct: 281 cccg 284
>ref|NM_001057767.1| Oryza sativa (japonica cultivar-group) Os03g0743400 (Os03g0743400) mRNA, complete cds Length = 1002 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 229 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 288 Query: 181 cccg 184 |||| Sbjct: 289 cccg 292
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Minus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 2101 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 2042 Query: 181 cccg 184 |||| Sbjct: 2041 cccg 2038
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 30313216 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 30313275 Query: 181 cccg 184 |||| Sbjct: 30313276 cccg 30313279 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 155 gaagaaggcccccgcctcccgttcctcccg 184 |||||||||||||| |||||| |||||||| Sbjct: 3353332 gaagaaggcccccgtctcccgctcctcccg 3353361
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 13474 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 13533 Query: 181 cccg 184 |||| Sbjct: 13534 cccg 13537
>dbj|AK120299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052C06, full insert sequence Length = 1004 Score = 87.7 bits (44), Expect = 1e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | Sbjct: 231 cgacggccgccaagtcggcggagaaggacaaggggaagaaggcccccgtctcccgctcgt 290 Query: 181 cccg 184 |||| Sbjct: 291 cccg 294
>gb|AY104056.1| Zea mays PCO122239 mRNA sequence Length = 924 Score = 71.9 bits (36), Expect = 6e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcggagaaggaaaaggggaagaaggcccccgcctcccgttcct 180 ||||||| |||||| ||||||||||||| |||||||||||||||||| ||| || |||| Sbjct: 259 cgacggcggccaagtcggcggagaaggacaaggggaagaaggcccccatctcacggtcct 318 Query: 181 cccg 184 |||| Sbjct: 319 cccg 322
>gb|DQ245751.1| Zea mays clone 20090 mRNA sequence Length = 787 Score = 48.1 bits (24), Expect = 0.085 Identities = 39/44 (88%) Strand = Plus / Plus Query: 123 acggccgccaaggcggcggagaaggaaaaggggaagaaggcccc 166 ||||| |||||| | || |||||||| ||||||||||||||||| Sbjct: 154 acggcggccaagtccgccgagaaggacaaggggaagaaggcccc 197
>ref|NM_112984.2| Arabidopsis thaliana protein transporter (AT3G20920) mRNA, complete cds Length = 1338 Score = 48.1 bits (24), Expect = 0.085 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 904 tgctgcttagacatcacgctccagatgaagcagctagagcgaggtaccaaaagaaggtt- 962 |||||||||| | ||| || || |||||||| ||| | || |||||||||| ||||| | Sbjct: 859 tgctgcttaggcgtcatgcccctgatgaagctgctcgggccaggtaccaaa-gaaggatg 917 Query: 963 tctaatataattgatgatgtccttgagtggtc 994 || || || ||||||||||||||||||||||| Sbjct: 918 tccaacatcattgatgatgtccttgagtggtc 949
>ref|NM_001035657.1| Arabidopsis thaliana protein transporter (AT3G20920) mRNA, complete cds Length = 1776 Score = 48.1 bits (24), Expect = 0.085 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 904 tgctgcttagacatcacgctccagatgaagcagctagagcgaggtaccaaaagaaggtt- 962 |||||||||| | ||| || || |||||||| ||| | || |||||||||| ||||| | Sbjct: 856 tgctgcttaggcgtcatgcccctgatgaagctgctcgggccaggtaccaaa-gaaggatg 914 Query: 963 tctaatataattgatgatgtccttgagtggtc 994 || || || ||||||||||||||||||||||| Sbjct: 915 tccaacatcattgatgatgtccttgagtggtc 946
>gb|AY114067.1| Arabidopsis thaliana unknown protein (At3g20920) mRNA, complete cds Length = 1129 Score = 48.1 bits (24), Expect = 0.085 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 904 tgctgcttagacatcacgctccagatgaagcagctagagcgaggtaccaaaagaaggtt- 962 |||||||||| | ||| || || |||||||| ||| | || |||||||||| ||||| | Sbjct: 806 tgctgcttaggcgtcatgcccctgatgaagctgctcgggccaggtaccaaa-gaaggatg 864 Query: 963 tctaatataattgatgatgtccttgagtggtc 994 || || || ||||||||||||||||||||||| Sbjct: 865 tccaacatcattgatgatgtccttgagtggtc 896
>gb|AY056330.1| Arabidopsis thaliana unknown protein (At3g20920) mRNA, complete cds Length = 1354 Score = 48.1 bits (24), Expect = 0.085 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 904 tgctgcttagacatcacgctccagatgaagcagctagagcgaggtaccaaaagaaggtt- 962 |||||||||| | ||| || || |||||||| ||| | || |||||||||| ||||| | Sbjct: 859 tgctgcttaggcgtcatgcccctgatgaagctgctcgggccaggtaccaaa-gaaggatg 917 Query: 963 tctaatataattgatgatgtccttgagtggtc 994 || || || ||||||||||||||||||||||| Sbjct: 918 tccaacatcattgatgatgtccttgagtggtc 949
>gb|AY088141.1| Arabidopsis thaliana clone 41717 mRNA, complete sequence Length = 1254 Score = 48.1 bits (24), Expect = 0.085 Identities = 77/92 (83%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 904 tgctgcttagacatcacgctccagatgaagcagctagagcgaggtaccaaaagaaggtt- 962 |||||||||| | ||| || || |||||||| ||| | || |||||||||| ||||| | Sbjct: 856 tgctgcttaggcgtcatgcccctgatgaagctgctcgggccaggtaccaaa-gaaggatg 914 Query: 963 tctaatataattgatgatgtccttgagtggtc 994 || || || ||||||||||||||||||||||| Sbjct: 915 tccaacatcattgatgatgtccttgagtggtc 946
>dbj|AP001304.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFD22 Length = 33330 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 972 attgatgatgtccttgagtggtc 994 ||||||||||||||||||||||| Sbjct: 7873 attgatgatgtccttgagtggtc 7851
>gb|AC174675.2| Mus musculus BAC clone RP24-159B8 from chromosome y, complete sequence Length = 137614 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 ggagaaggaaaaggggaagaagg 162 ||||||||||||||||||||||| Sbjct: 43981 ggagaaggaaaaggggaagaagg 43959
>emb|BX822566.1|CNS0A7AF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1298 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 972 attgatgatgtccttgagtggtc 994 ||||||||||||||||||||||| Sbjct: 903 attgatgatgtccttgagtggtc 925
>emb|BX824563.1|CNS0A6RT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1147 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 972 attgatgatgtccttgagtggtc 994 ||||||||||||||||||||||| Sbjct: 921 attgatgatgtccttgagtggtc 943
>ref|NM_001055584.1| Oryza sativa (japonica cultivar-group) Os03g0162200 (Os03g0162200) mRNA, complete cds Length = 813 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 155 gaagaaggcccccgcctcccgttcctcccg 184 |||||||||||||| |||||| |||||||| Sbjct: 171 gaagaaggcccccgtctcccgctcctcccg 200
>gb|BT016248.1| Zea mays clone Contig81 mRNA sequence Length = 623 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 gagaaggaaaaggggaagaaggcccc 166 |||||||| ||||||||||||||||| Sbjct: 16 gagaaggacaaggggaagaaggcccc 41
>gb|AC125124.4| Mus musculus BAC clone RP24-273N19 from chromosome 16, complete sequence Length = 188199 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1099 cagatgcagacgaggatgtgga 1120 |||||||||||||||||||||| Sbjct: 129748 cagatgcagacgaggatgtgga 129727
>gb|AC140413.3| Mus musculus BAC clone RP23-138H4 from chromosome 19, complete sequence Length = 202504 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 ggagaaggaaaaggggaagaag 161 |||||||||||||||||||||| Sbjct: 114844 ggagaaggaaaaggggaagaag 114865
>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence Length = 208416 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1312 ggaaaggaaatgttttgtcaaa 1333 |||||||||||||||||||||| Sbjct: 58734 ggaaaggaaatgttttgtcaaa 58713
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 155 gaagaaggcccccgcctcccgttcctcccg 184 |||||||||||||| |||||| |||||||| Sbjct: 75993 gaagaaggcccccgtctcccgctcctcccg 75964
>gb|AF201929.1|AF201929 Murine hepatitis virus strain 2, complete genome Length = 31276 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1115 tgtggatgcagatgaaacccaaggtg 1140 ||||||||||||||||| |||||||| Sbjct: 3071 tgtggatgcagatgaaaaccaaggtg 3096
>gb|AF207902.1|AF207902 Murine hepatitis virus strain ML-11 RNA-directed RNA polymerase (orf1A), RNA-directed RNA polymerase (orf1B), non-structural protein (orf2A), hemagglutinin esterase protein (orf2B), spike glycoprotein precursor (orf3), non-structural protein (orf5A), envelope glycoprotein E (orf5B), matrix glycoprotein (orf6), and nucleocapsid protein (orf7) genes, complete cds Length = 31277 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1115 tgtggatgcagatgaaacccaaggtg 1140 ||||||||||||||||| |||||||| Sbjct: 3071 tgtggatgcagatgaaaaccaaggtg 3096
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 863 gtcaagacttttctatgctactgttg 888 ||||||||||||||| |||||||||| Sbjct: 186119 gtcaagacttttctaggctactgttg 186094
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 gccgccaaggcggcggagaagg 147 |||||||||||||||||||||| Sbjct: 466902 gccgccaaggcggcggagaagg 466923
>gb|AC084660.1|CBRG46N08 Caenorhabditis briggsae cosmid G46N08, complete sequence Length = 37436 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1340 aatcagactaccttttttgttt 1361 |||||||||||||||||||||| Sbjct: 13414 aatcagactaccttttttgttt 13435
>dbj|AK121533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030P21, full insert sequence Length = 817 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 155 gaagaaggcccccgcctcccgttcctcccg 184 |||||||||||||| |||||| |||||||| Sbjct: 173 gaagaaggcccccgtctcccgctcctcccg 202
>gb|AF208066.1|AF208066 Murine hepatitis virus strain Penn 97-1, complete genome Length = 31112 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1115 tgtggatgcagatgaaacccaaggtg 1140 ||||||||||||||||| |||||||| Sbjct: 3071 tgtggatgcagatgaaaaccaaggtg 3096
>dbj|AK061605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C05, full insert sequence Length = 785 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 155 gaagaaggcccccgcctcccgttcctcccg 184 |||||||||||||| |||||| |||||||| Sbjct: 168 gaagaaggcccccgtctcccgctcctcccg 197
>emb|CT867971.3| Human DNA sequence from clone XX-NCIH1770_17G13, complete sequence Length = 117339 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 749 tcttcttggaaaacgggtgtggttc 773 |||||||||||||||||| |||||| Sbjct: 106778 tcttcttggaaaacgggtttggttc 106754
>emb|CT967324.6| Human DNA sequence from clone XX-NCIH1770_9N16, complete sequence Length = 114955 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 749 tcttcttggaaaacgggtgtggttc 773 |||||||||||||||||| |||||| Sbjct: 30198 tcttcttggaaaacgggtttggttc 30222
>emb|CT867970.3| Human DNA sequence from clone XX-NCIH1770_10D19, complete sequence Length = 148222 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 749 tcttcttggaaaacgggtgtggttc 773 |||||||||||||||||| |||||| Sbjct: 72594 tcttcttggaaaacgggtttggttc 72570
>gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome 6, complete sequence Length = 182525 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 agaaggaaaaggggaagaagg 162 ||||||||||||||||||||| Sbjct: 169646 agaaggaaaaggggaagaagg 169626
>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete sequence Length = 186172 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gagaaggaaaaggggaagaag 161 ||||||||||||||||||||| Sbjct: 132836 gagaaggaaaaggggaagaag 132856
>gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, complete sequence Length = 202374 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 agaaggaaaaggggaagaagg 162 ||||||||||||||||||||| Sbjct: 106640 agaaggaaaaggggaagaagg 106660
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 cgacggccgccaaggcggcgg 141 ||||||||||||||||||||| Sbjct: 398446 cgacggccgccaaggcggcgg 398466
>dbj|AK001037.1| Homo sapiens cDNA FLJ10175 fis, clone HEMBA1003989 Length = 1798 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 828 cctgagaaggatgagggagag 848 ||||||||||||||||||||| Sbjct: 1023 cctgagaaggatgagggagag 1043
>gb|AY218842.1| Spodoptera exigua midgut class 1 aminopeptidase N (apn1) mRNA, complete cds Length = 3332 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1186 aacttctgaatttgatggaag 1206 ||||||||||||||||||||| Sbjct: 897 aacttctgaatttgatggaag 917
>gb|AC091614.3| Homo sapiens chromosome 1 clone RP4-665J23, complete sequence Length = 107764 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 790 cagaggagaccacatttagagaact 814 |||||||||||||||||| |||||| Sbjct: 50722 cagaggagaccacatttaaagaact 50698
>emb|AL080276.9|HSJ101K10 Human DNA sequence from clone RP1-101K10 on chromosome 6q25-26 Contains a novel pseudogene, the FBXO5 gene for F-box only protein 5, the gene for similar to prokaryotic-type class I peptide chain release factors (LOC54516), the RGS17 gene for regulator of G-protein signaling 17, a novel gene and two putative CpG islands, complete sequence Length = 111723 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 828 cctgagaaggatgagggagag 848 ||||||||||||||||||||| Sbjct: 60366 cctgagaaggatgagggagag 60346
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gacggaccttgtggcagacga 588 ||||||||||||||||||||| Sbjct: 14313 gacggaccttgtggcagacga 14293
>gb|AC096719.3| Homo sapiens BAC clone RP11-14M23 from 4, complete sequence Length = 158398 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1305 tgtactcggaaaggaaatgtt 1325 ||||||||||||||||||||| Sbjct: 9426 tgtactcggaaaggaaatgtt 9446
>gb|AC104623.4| Homo sapiens BAC clone RP11-542H15 from 2, complete sequence Length = 102794 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 749 tcttcttggaaaacgggtgtggttc 773 |||||||||||||||||| |||||| Sbjct: 58924 tcttcttggaaaacgggtttggttc 58948
>gb|AC144940.5| Mus musculus BAC clone RP23-429A10 from chromosome 9, complete sequence Length = 213669 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1189 ttctgaatttgatggaagttt 1209 ||||||||||||||||||||| Sbjct: 210615 ttctgaatttgatggaagttt 210635
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 568 gacggaccttgtggcagacga 588 ||||||||||||||||||||| Sbjct: 14313 gacggaccttgtggcagacga 14293
>gb|AC079245.35| Mus musculus strain C57BL/6J chromosome 9 clone rp23-426k2, complete sequence Length = 213098 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1189 ttctgaatttgatggaagttt 1209 ||||||||||||||||||||| Sbjct: 14847 ttctgaatttgatggaagttt 14867
>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b, complete sequence Length = 77452 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1342 tcagactaccttttttgtttg 1362 ||||||||||||||||||||| Sbjct: 73991 tcagactaccttttttgtttg 74011
>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence Length = 245367 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 884 tgttgccttattggtgatatt 904 ||||||||||||||||||||| Sbjct: 239366 tgttgccttattggtgatatt 239346
>emb|X78846.1|ZM38G1 Z.Mays Zm38 gene, intron 1 Length = 3045 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 agccaaggcgacggccgccaaggcg 137 |||| |||||||||||||||||||| Sbjct: 2517 agccgaggcgacggccgccaaggcg 2541
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 atatggaagctgaagatattg 402 ||||||||||||||||||||| Sbjct: 768301 atatggaagctgaagatattg 768321
>emb|AL662829.8| Mouse DNA sequence from clone RP23-188M15 on chromosome 4, complete sequence Length = 182069 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1025 taaacatactgaggataatgc 1045 ||||||||||||||||||||| Sbjct: 28812 taaacatactgaggataatgc 28792
>emb|AL772338.9| Mouse DNA sequence from clone RP23-47A6 on chromosome 4, complete sequence Length = 235366 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 aaggaaatgttttgtcaaaat 1335 ||||||||||||||||||||| Sbjct: 153527 aaggaaatgttttgtcaaaat 153547 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 274,133,462 Number of extensions: 14831370 Number of successful extensions: 310729 Number of sequences better than 10.0: 61 Number of HSP's gapped: 310729 Number of HSP's successfully gapped: 75 Length of query: 1378 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1355 Effective length of database: 18,503,978,556 Effective search space: 25072890943380 Effective search space used: 25072890943380 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)