ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf82b15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7L5D6:CG020_HUMAN UPF0363 protein C7orf20 - Homo sapiens (Human) 74 4e-12
2Q12125:YO164_YEAST UPF0363 protein YOR164C - Saccharomyces cerev... 35 1.4
3Q5UQ83:YR526_MIMIV Putative alpha/beta hydrolase R526 - Mimivirus 33 5.3
4O13415:AREA_ASPOR Nitrogen regulatory protein areA - Aspergillus... 32 9.1

>Q7L5D6:CG020_HUMAN UPF0363 protein C7orf20 - Homo sapiens (Human)|
          Length = 327
 Score = 73.6 bits (179), Expect = 4e-12
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
 Frame = +3

Query: 1506 QKLSEAISAAKVRSEGCSSFLRAALRWSAEFGTSRNGSPDLHVMLGEYIYSESPETDMTK 1685
            + L++  S     S    +F+  AL+WS+  G+ + G P LH +L   ++ E    +  +
Sbjct: 106  ENLAKVFSLMDPNSPERVTFVSRALKWSSG-GSGKLGHPRLHQLLALTLWKEQ---NYCE 161

Query: 1686 VASHFVRGNDPKKFASMLVNFM-GKCYPGEDDTAIARGVLMYLSLGNLRDANLLMDGMKE 1862
               HF+   D +  A+MLV +   + +  E D  +A+ VL +L L N   A+++     +
Sbjct: 162  SRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMFVAQAVLQFLCLKNKSSASVVFTTYTQ 221

Query: 1863 QLKSADLEFPKTN-LIEFIKYLLQTLERDAYTLFRTLRQKYRTSTDRDTVFEELLDEIAA 2039
            +  S +   P    L+ FI +LL  ++    T+F  L ++Y+ S  RD ++ E LD I  
Sbjct: 222  KHPSIEDGPPFVEPLLNFIWFLLLAVDGGKLTVFTVLCEQYQPSLRRDPMYNEYLDRIGQ 281

Query: 2040 KFYGV--RQQNPLEGLFGEM 2093
             F+GV  +Q +   GL G +
Sbjct: 282  LFFGVPPKQTSSYGGLLGNL 301



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>Q12125:YO164_YEAST UPF0363 protein YOR164C - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 312

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 170 KTIERFEKMVEGGSYYEAQQMFKSTSARY 256
           KT++RFE  ++ G YYEA Q  ++ + RY
Sbjct: 15  KTLQRFENKIKAGDYYEAHQTLRTIANRY 43



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>Q5UQ83:YR526_MIMIV Putative alpha/beta hydrolase R526 - Mimivirus|
          Length = 346

 Score = 33.1 bits (74), Expect = 5.3
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
 Frame = -3

Query: 2336 FFFCRKEKNNIKTNRMILQQISGASSCSFMLNVLTPLTMTREAPIEHFLCVLFPG*PTVD 2157
            +F+   ++ N+  N +I   + G S    M  VL  LT  +  P   +  +L+P      
Sbjct: 164  YFYSNAQRYNLDFNNII---VVGDSVGGNMATVLAMLTREKTGPRFKYQILLYPVISAAM 220

Query: 2156 LPQKYYS---GQWIKLFSQQLYLEHFTEKSFQRILLP 2055
              Q Y +   G W+   S + + E +TE + Q +++P
Sbjct: 221  NTQSYQTFENGPWLSKKSMEWFYEQYTEPN-QNLMIP 256



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>O13415:AREA_ASPOR Nitrogen regulatory protein areA - Aspergillus oryzae|
          Length = 866

 Score = 32.3 bits (72), Expect = 9.1
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
 Frame = +3

Query: 1485 DDYDDDGQKLSEAISAAKVRSEGCSSFLRAALRWSAEFGTSRNGSPDL------HVMLGE 1646
            D+ DDDG +LSE    A     G      + ++W  +F  S +  P        HV +G 
Sbjct: 501  DNEDDDGHQLSERAGLAMPTEYGDEDGFSSGMQWDGQFPGSFHSLPGFGPQHRKHVTIGS 560

Query: 1647 YIYSESPE 1670
                ++PE
Sbjct: 561  TDMMDTPE 568


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 406,568,669
Number of extensions: 8861231
Number of successful extensions: 19788
Number of sequences better than 10.0: 4
Number of HSP's gapped: 19785
Number of HSP's successfully gapped: 4
Length of query: 780
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 659
Effective length of database: 67,496,744
Effective search space: 44480354296
Effective search space used: 44480354296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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