ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf82a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1D42142:Os07g0215500 93 2e-19
2AF042200:Os07g0215500 93 2e-19
3D42141:Os07g0214600 92 4e-19
4D42140:Os07g0214300 91 5e-19
5X62091:Os07g0214300 91 5e-19
6D42139:Os07g0214300 91 5e-19
7D11432:Os07g0214300 91 5e-19
8AK107328:Os07g0214300 91 5e-19
9D11430:Os07g0215500 91 7e-19
10AK107215:Os07g0213800 87 1e-17
11X66257:Os07g0214100 83 2e-16
12D11431:Os07g0214100 83 2e-16
13D43657:Os07g0214300 70 1e-12
14D43659:Os07g0214300 69 3e-12
15D43658: 67 8e-12
16AK107696:Os07g0213600 33 0.22
17AK059028:Os01g0919700 29 3.3
18AF216531:Os03g0151000 28 5.6
19AK109631:Os04g0509000 28 5.6
20Os08g0249600:Os08g0249600 27 9.4
21AK120836:Os01g0218800 27 9.4
22AK103664:Os01g0218800 27 9.4
23AK106337:Os04g0430600 27 9.5
24AK072050:Os04g0430600 27 9.5 
>D42142:Os07g0215500 |
          Length = 160
 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVGN---RVPEDVLRDCCQEVANISNEWCRCGDL 317
           P   C P MG+ + PL RCRALVK +CVG       E V RDCC+++A + + WCRC  +
Sbjct: 38  PGPLCQPGMGYPMYPLPRCRALVKRQCVGRGTAAAAEQVRRDCCRQLAAVDDSWCRCEAI 97

Query: 318 GSMLRSVYAAL---XXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
             ML  +Y  L               C++  ++   A +PA CNV IPN   G  GVCYW
Sbjct: 98  SHMLGGIYRELGAPDVGHPMSEVFRGCRRGDLERAAASLPAFCNVDIPN---GGGGVCYW 154
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>AF042200:Os07g0215500 |
          Length = 160

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVGN---RVPEDVLRDCCQEVANISNEWCRCGDL 317
           P   C P MG+ + PL RCRALVK +CVG       E V RDCC+++A + + WCRC  +
Sbjct: 38  PGPLCQPGMGYPMYPLPRCRALVKRQCVGRGTAAAAEQVRRDCCRQLAAVDDSWCRCEAI 97

Query: 318 GSMLRSVYAAL---XXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
             ML  +Y  L               C++  ++   A +PA CNV IPN   G  GVCYW
Sbjct: 98  SHMLGGIYRELGAPDVGHPMSEVFRGCRRGDLERAAASLPAFCNVDIPN---GGGGVCYW 154
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>D42141:Os07g0214600 |
          Length = 157

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 48/118 (40%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVG-NRVPEDVLRDCCQEVANISNEWCRCGDLGS 323
           P   C P +G+   PL RCRA VK +CV    V E V R CC+++A I + WCRC  L  
Sbjct: 37  PGQLCQPGIGYPTYPLPRCRAFVKRQCVAPGTVDEQVRRGCCRQLAAIDSSWCRCDALNH 96

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           MLR +Y    A             C++  ++   A +PA CNV IPN   G  GVCYW
Sbjct: 97  MLRIIYRESGAADAGHPMAEVFRGCRRGDIERAAASLPAFCNVDIPN---GVGGVCYW 151
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>D42140:Os07g0214300 |
          Length = 156

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +3

Query: 159 CDPEMGHKVSPLTRCRALVKLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGS 323
           C P MG+ +  L RCRA+VK +CVG+  P     E + +DCC+++A + + WCRC  L  
Sbjct: 31  CQPGMGYPMYSLPRCRAVVKRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNH 90

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           M+  +Y    A             C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 91  MVGGIYRELGATDVGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 145
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>X62091:Os07g0214300 |
          Length = 166

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +3

Query: 159 CDPEMGHKVSPLTRCRALVKLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGS 323
           C P MG+ +  L RCRA+VK +CVG+  P     E + +DCC+++A + + WCRC  L  
Sbjct: 41  CQPGMGYPMYSLPRCRAVVKRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNH 100

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           M+  +Y    A             C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 101 MVGGIYRELGATDVGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 155
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>D42139:Os07g0214300 |
          Length = 166

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +3

Query: 159 CDPEMGHKVSPLTRCRALVKLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGS 323
           C P MG+ +  L RCRA+VK +CVG+  P     E + +DCC+++A + + WCRC  L  
Sbjct: 41  CQPGMGYPMYSLPRCRAVVKRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNH 100

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           M+  +Y    A             C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 101 MVGGIYRELGATDVGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 155
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>D11432:Os07g0214300 |
          Length = 166

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +3

Query: 159 CDPEMGHKVSPLTRCRALVKLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGS 323
           C P MG+ +  L RCRA+VK +CVG+  P     E + +DCC+++A + + WCRC  L  
Sbjct: 41  CQPGMGYPMYSLPRCRAVVKRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNH 100

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           M+  +Y    A             C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 101 MVGGIYRELGATDVGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 155
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>AK107328:Os07g0214300 |
          Length = 166

 Score = 91.3 bits (225), Expect = 5e-19
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
 Frame = +3

Query: 159 CDPEMGHKVSPLTRCRALVKLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGS 323
           C P MG+ +  L RCRA+VK +CVG+  P     E + +DCC+++A + + WCRC  L  
Sbjct: 41  CQPGMGYPMYSLPRCRAVVKRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNH 100

Query: 324 MLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           M+  +Y    A             C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 101 MVGGIYRELGATDVGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 155
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>D11430:Os07g0215500 |
          Length = 158

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 47/118 (39%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVGNRVP-EDVLRDCCQEVANISNEWCRCGDLGS 323
           P   C P MG+ + PL RCRALVK +C G     E V RDCC+++A + + WCRC  +  
Sbjct: 38  PGPLCQPGMGYPMYPLPRCRALVKRQCRGTAAAAEQVRRDCCRQLAAVDDSWCRCEAISH 97

Query: 324 MLRSVYAAL---XXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           ML  +Y  L               C++  ++   A +PA CNV IPN   G  GVCYW
Sbjct: 98  MLGGIYRELGAPDVGHPMSEVFRGCRRGDLERAAASLPAFCNVDIPN---GGGGVCYW 152
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>AK107215:Os07g0213800 |
          Length = 160

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 46/117 (39%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVGNRVPEDVLRDCCQEVANISNEWCRCGDLGSM 326
           P   C    G+ + PL RCRAL K +C G  V E V +DCC+++A I + +CRC  L  M
Sbjct: 36  PGQLCAAGRGYPMYPLPRCRALAKRQCAGGAVDEQVRQDCCRQLAAIDDSFCRCPALSHM 95

Query: 327 LRSVYAAL---XXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
           L  +Y  L               C++  MK + A +PA CNV IP    G  GVCYW
Sbjct: 96  LVGMYKELGAPAKGQPMDEVFPGCRRGDMKRVAASLPAFCNVDIP---IGIGGVCYW 149
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>X66257:Os07g0214100 |
          Length = 163

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVG----NRVPEDVLRDCCQEVANISNEWCRCGD 314
           P   C P + +    L +CR LV+ +CVG    +   E V +DCC+++A + + WCRCG 
Sbjct: 35  PGEQCRPGISYPTYSLPQCRTLVRRQCVGRGAASAADEQVWQDCCRQLAAVDDGWCRCGA 94

Query: 315 LGSMLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCY 485
           L  ML  +Y    A             C++  ++   A +PA CNV IPN   G  GVCY
Sbjct: 95  LDHMLSGIYRELGATEAGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GPGGVCY 151

Query: 486 W 488
           W
Sbjct: 152 W 152
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>D11431:Os07g0214100 |
          Length = 163

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
 Frame = +3

Query: 147 PWMWCDPEMGHKVSPLTRCRALVKLECVG----NRVPEDVLRDCCQEVANISNEWCRCGD 314
           P   C P + +    L +CR LV+ +CVG    +   E V +DCC+++A + + WCRCG 
Sbjct: 35  PGEQCRPGISYPTYSLPQCRTLVRRQCVGRGAASAADEQVWQDCCRQLAAVDDGWCRCGA 94

Query: 315 LGSMLRSVY---AALXXXXXXXXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCY 485
           L  ML  +Y    A             C++  ++   A +PA CNV IPN   G  GVCY
Sbjct: 95  LDHMLSGIYRELGATEAGHPMAEVFPGCRRGDLERAAASLPAFCNVDIPN---GPGGVCY 151

Query: 486 W 488
           W
Sbjct: 152 W 152
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>D43657:Os07g0214300 |
          Length = 107

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
 Frame = +3

Query: 216 KLECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGSMLRSVY---AALXXXXXXX 371
           K +CVG+  P     E + +DCC+++A + + WCRC  L  M+  +Y    A        
Sbjct: 1   KRQCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMA 60

Query: 372 XXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
                C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 61  EVFPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 96
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>D43659:Os07g0214300 |
          Length = 106

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
 Frame = +3

Query: 222 ECVGNRVP-----EDVLRDCCQEVANISNEWCRCGDLGSMLRSVY---AALXXXXXXXXX 377
           +CVG+  P     E + +DCC+++A + + WCRC  L  M+  +Y    A          
Sbjct: 2   QCVGHGAPGGAVDEQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPMAEV 61

Query: 378 XXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
              C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 62  FPGCRRGDLERAAASLPAFCNVDIPN---GTGGVCYW 95
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>D43658: |
          Length = 109

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
 Frame = +3

Query: 210 LVKLECVGNR----VPEDVLRDCCQEVANISNEWCRCGDLGSMLRSVY---AALXXXXXX 368
           +VK +CV  R      E + +DCC+++A + + WCRC  L  M+  +Y    A       
Sbjct: 2   VVKRQCVATRRTGGADEQLRQDCCRQLAAVDDSWCRCSALNHMVGGIYRELGATDVGHPM 61

Query: 369 XXXXXXCQKDVMKLLVAGVPALCNVPIPNEAAGTRGVCYW 488
                 C++  ++   A +PA CNV IPN   GT GVCYW
Sbjct: 62  AEVFPGCRRGDLERARATLPAFCNVDIPN---GTGGVCYW 98
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>AK107696:Os07g0213600 |
          Length = 154

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
 Frame = +3

Query: 159 CDPEMGH-KVSPLTRCRALVKLECVGNRVPEDVLRDCCQEVANISNEWCRCGDLGSMLRS 335
           C+P  G     PL  CRA +   C G   P  V   CC ++  ++   CRC  L +M+  
Sbjct: 49  CEPGQGVVPKDPLPGCRAYLLRRC-GGGDPPGVRARCCHQLREVAAR-CRCDALRAMVEV 106

Query: 336 VYAALXXXXXXXXXXXXCQKDVMKLLVAGVPAL--CNVPIPNEAAGTR 473
           +                C+K  M  +  G+P    C++    +  G+R
Sbjct: 107 L-------VEEEEAPLACKKGAMAAIAEGLPGRDECDLDTRADDGGSR 147
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>AK059028:Os01g0919700 |
          Length = 379

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 16/70 (22%)
 Frame = -1

Query: 163 SHHIQGPLLSLRAPVIGVTMSMHSRSTNN----------------MLFIHIAPIPIYYYL 32
           +H + G     + P+ G+TM   S+S+N+                +LFIH  P   Y Y 
Sbjct: 81  AHPVYGNKGKAKDPIFGLTMGAESQSSNDVFRWFCVEAGSSSNPPVLFIHGFPSQAYSYR 140

Query: 31  NQLLISIGSY 2
           N L +   +Y
Sbjct: 141 NVLPVVSDNY 150
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>AF216531:Os03g0151000 |
          Length = 113

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 279 PPPGSSLLGHPRAPGCPHTRASPMLGSA*AGSP 181
           PPPG S     R+P  PH R+ P + S+   +P
Sbjct: 4   PPPGRSSTRCRRSPPLPHQRSPPPVSSSPLPAP 36
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>AK109631:Os04g0509000 |
          Length = 325

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 279 PPPGSSLLGHPRAPGCPHT---RASPMLGSA*AGSPCGPSQDHTTS 151
           PPP S  L  PRAP  P T    + P  G+A   S     Q  T+S
Sbjct: 229 PPPASRRLAFPRAPARPTTMDYSSDPADGAAGTSSASARRQRSTSS 274
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>Os08g0249600:Os08g0249600 |
          Length = 951

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 479 DPSGACRLVGNGDIAERRHACNQELHHIL 393
           D SGA  L+GN   A  RHA  +E+ H++
Sbjct: 544 DKSGAYVLLGNIYAASGRHASAREIRHLM 572
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>AK120836:Os01g0218800 |
          Length = 991

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 156 WCDPEMGHKVSPLTRCRALVKLECVGNRVPEDVLRDCCQ--EVANISNEWCRCGDLGSML 329
           W +    +K+    RC+  V  EC G R  +D     C+  E+     E C C   G  L
Sbjct: 569 WVEDWDYNKIIICNRCQIAVHQECYGARDVQDFTNWVCRACELPKQKRECCLCPVKGGAL 628

Query: 330 R 332
           +
Sbjct: 629 K 629
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>AK103664:Os01g0218800 |
          Length = 800

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 156 WCDPEMGHKVSPLTRCRALVKLECVGNRVPEDVLRDCCQ--EVANISNEWCRCGDLGSML 329
           W +    +K+    RC+  V  EC G R  +D     C+  E+     E C C   G  L
Sbjct: 378 WVEDWDYNKIIICNRCQIAVHQECYGARDVQDFTNWVCRACELPKQKRECCLCPVKGGAL 437

Query: 330 R 332
           +
Sbjct: 438 K 438
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>AK106337:Os04g0430600 |
          Length = 374

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 142 LLSLRAPVIGVTMSMHSRSTNNMLFIHIAPIPIYYYLNQLLISIGS 5
           L+      +  T+ M  R+T +   +H+   P+  Y  QLL++ G+
Sbjct: 233 LVPTELSTVNATVRMTFRNTGSFFGVHVTAEPLTLYYYQLLMASGN 278
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>AK072050:Os04g0430600 |
          Length = 367

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 142 LLSLRAPVIGVTMSMHSRSTNNMLFIHIAPIPIYYYLNQLLISIGS 5
           L+      +  T+ M  R+T +   +H+   P+  Y  QLL++ G+
Sbjct: 226 LVPTELSTVNATVRMTFRNTGSFFGVHVTAEPLTLYYYQLLMASGN 271


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,741,263
Number of extensions: 379359
Number of successful extensions: 1240
Number of sequences better than 10.0: 24
Number of HSP's gapped: 1214
Number of HSP's successfully gapped: 24
Length of query: 223
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 126
Effective length of database: 11,515,878
Effective search space: 1451000628
Effective search space used: 1451000628
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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