| Clone Name | FLbaf81p04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066512.1| Oryza sativa (japonica cultivar-group) Os07g0558800 (Os07g0558800) mRNA, complete cds Length = 1172 Score = 642 bits (324), Expect = 0.0 Identities = 514/576 (89%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 4 tcgatccgtcaaacaagctctacttcccatatgaaccaggaaagcaggtcaagagtgcaa 63 |||||||| | ||||||||||||||||||||| |||||||| | ||||| | ||| |||| Sbjct: 318 tcgatccgcccaacaagctctacttcccatatcaaccaggacaacaggtgaggagcgcaa 377 Query: 64 ttaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaactgcaccca 123 | ||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 378 tcaggataaagaacacaagcaagtctcatgtagcatttaagttccaaacaactgcaccca 437 Query: 124 agagttgctttatgcgtcctcctggagccatacttgcccctggcgagactatcatagcga 183 |||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| | Sbjct: 438 agagctgcttcatgcgtcctcctggagccatacttgcccctggggagaccatcatagcaa 497 Query: 184 ctgttttcaagtttgtcgagcacccagagaataatgagaatgttctgcagaagtgcaagg 243 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 498 ctgttttcaagtttgtcgagcacccagagaacaatgagaatgttctacagaagtgcaagg 557 Query: 244 tcaagttcaagattttgagcttgaaggtcaaaggacccatggaatatgcaccagaattgt 303 | || |||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 558 ttaaattcaagattttgagcttgaaggtcaaaggacccatggattacgcaccagaaatgt 617 Query: 304 ttgacgagcagaaagatcaggcagttgttgagaagatactgagggttgttttcttggatg 363 |||| ||||||| |||||| || || ||||||||||| |||||||||||||| ||| ||| Sbjct: 618 ttgatgagcagagagatcaagccgtagttgagaagatcctgagggttgtttttttgaatg 677 Query: 364 ttcagaacccaggcccacaactggaaaagctgaacactcagttagctgaggcagaggctg 423 || | || ||||||||||||||||||||||| || | |||||| |||||||| ||||||| Sbjct: 678 ttgaaaatccaggcccacaactggaaaagctaaataatcagttggctgaggctgaggctg 737 Query: 424 cacttgaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggc 483 |||||||||| | ||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 738 cacttgaggcaagaaagaaacctcctgaagagaatggcccaaagattgttggcgaagggc 797 Query: 484 ttgtcattgatgaatggaaggagaggagggaaagatacctcgctcaacaacaggtcgaag 543 ||||||| ||||||||||| || | ||||||||||| || || ||||||||||| |||| Sbjct: 798 ttgtcatcgatgaatggaaagaacgaagggaaagatatcttgcacaacaacaggttgaag 857 Query: 544 cggtcgactcagtgtaaattgtacc-ttcttctgct 578 ||| ||||||||||||||||| || |||||||||| Sbjct: 858 tggttgactcagtgtaaattgtgcctttcttctgct 893
>dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145E05, full insert sequence Length = 1173 Score = 642 bits (324), Expect = 0.0 Identities = 514/576 (89%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 4 tcgatccgtcaaacaagctctacttcccatatgaaccaggaaagcaggtcaagagtgcaa 63 |||||||| | ||||||||||||||||||||| |||||||| | ||||| | ||| |||| Sbjct: 319 tcgatccgcccaacaagctctacttcccatatcaaccaggacaacaggtgaggagcgcaa 378 Query: 64 ttaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaactgcaccca 123 | ||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 379 tcaggataaagaacacaagcaagtctcatgtagcatttaagttccaaacaactgcaccca 438 Query: 124 agagttgctttatgcgtcctcctggagccatacttgcccctggcgagactatcatagcga 183 |||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| | Sbjct: 439 agagctgcttcatgcgtcctcctggagccatacttgcccctggggagaccatcatagcaa 498 Query: 184 ctgttttcaagtttgtcgagcacccagagaataatgagaatgttctgcagaagtgcaagg 243 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 499 ctgttttcaagtttgtcgagcacccagagaacaatgagaatgttctacagaagtgcaagg 558 Query: 244 tcaagttcaagattttgagcttgaaggtcaaaggacccatggaatatgcaccagaattgt 303 | || |||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct: 559 ttaaattcaagattttgagcttgaaggtcaaaggacccatggattacgcaccagaaatgt 618 Query: 304 ttgacgagcagaaagatcaggcagttgttgagaagatactgagggttgttttcttggatg 363 |||| ||||||| |||||| || || ||||||||||| |||||||||||||| ||| ||| Sbjct: 619 ttgatgagcagagagatcaagccgtagttgagaagatcctgagggttgtttttttgaatg 678 Query: 364 ttcagaacccaggcccacaactggaaaagctgaacactcagttagctgaggcagaggctg 423 || | || ||||||||||||||||||||||| || | |||||| |||||||| ||||||| Sbjct: 679 ttgaaaatccaggcccacaactggaaaagctaaataatcagttggctgaggctgaggctg 738 Query: 424 cacttgaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggc 483 |||||||||| | ||||||||||| ||||||||||| || || |||||||| ||||||| Sbjct: 739 cacttgaggcaagaaagaaacctcctgaagagaatggcccaaagattgttggcgaagggc 798 Query: 484 ttgtcattgatgaatggaaggagaggagggaaagatacctcgctcaacaacaggtcgaag 543 ||||||| ||||||||||| || | ||||||||||| || || ||||||||||| |||| Sbjct: 799 ttgtcatcgatgaatggaaagaacgaagggaaagatatcttgcacaacaacaggttgaag 858 Query: 544 cggtcgactcagtgtaaattgtacc-ttcttctgct 578 ||| ||||||||||||||||| || |||||||||| Sbjct: 859 tggttgactcagtgtaaattgtgcctttcttctgct 894
>dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E12, full insert sequence Length = 1741 Score = 577 bits (291), Expect = e-161 Identities = 454/507 (89%), Gaps = 1/507 (0%) Strand = Plus / Plus Query: 73 agaatacaagcaagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgct 132 |||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 953 agaacacaagcaagtctcatgtagcatttaagttccaaacaactgcacccaagagctgct 1012 Query: 133 ttatgcgtcctcctggagccatacttgcccctggcgagactatcatagcgactgttttca 192 | |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 1013 tcatgcgtcctcctggagccatacttgcccctggggagaccatcatagcaactgttttca 1072 Query: 193 agtttgtcgagcacccagagaataatgagaatgttctgcagaagtgcaaggtcaagttca 252 |||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||| Sbjct: 1073 agtttgtcgagcacccagagaacaatgagaatgttctacagaagtgcaaggttaaattca 1132 Query: 253 agattttgagcttgaaggtcaaaggacccatggaatatgcaccagaattgtttgacgagc 312 |||||||||||||||||||||||||||||||||| || ||||||||| ||||||| |||| Sbjct: 1133 agattttgagcttgaaggtcaaaggacccatggattacgcaccagaaatgtttgatgagc 1192 Query: 313 agaaagatcaggcagttgttgagaagatactgagggttgttttcttggatgttcagaacc 372 ||| |||||| || || ||||||||||| |||||||||||||| ||| ||||| | || | Sbjct: 1193 agagagatcaagccgtagttgagaagatcctgagggttgtttttttgaatgttgaaaatc 1252 Query: 373 caggcccacaactggaaaagctgaacactcagttagctgaggcagaggctgcacttgagg 432 |||||||||||||||||||||| || | |||||| |||||||| |||||||||||||||| Sbjct: 1253 caggcccacaactggaaaagctaaataatcagttggctgaggctgaggctgcacttgagg 1312 Query: 433 cgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtcattg 492 | | ||||||||||| ||||||||||| || || |||||||| |||||||||||||| | Sbjct: 1313 caagaaagaaacctcctgaagagaatggcccaaagattgttggcgaagggcttgtcatcg 1372 Query: 493 atgaatggaaggagaggagggaaagatacctcgctcaacaacaggtcgaagcggtcgact 552 |||||||||| || | ||||||||||| || || ||||||||||| |||| ||| |||| Sbjct: 1373 atgaatggaaagaacgaagggaaagatatcttgcacaacaacaggttgaagtggttgact 1432 Query: 553 cagtgtaaattgtacc-ttcttctgct 578 ||||||||||||| || |||||||||| Sbjct: 1433 cagtgtaaattgtgcctttcttctgct 1459
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 178 bits (90), Expect = 2e-41 Identities = 108/114 (94%) Strand = Plus / Plus Query: 186 gttttcaagtttgtcgagcacccagagaataatgagaatgttctgcagaagtgcaaggtc 245 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 22282405 gttttcaagtttgtcgagcacccagagaacaatgagaatgttctacagaagtgcaaggtt 22282464 Query: 246 aagttcaagattttgagcttgaaggtcaaaggacccatggaatatgcaccagaa 299 || |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 22282465 aaattcaagattttgagcttgaaggtcaaaggacccatggattacgcaccagaa 22282518 Score = 127 bits (64), Expect = 7e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 381 caactggaaaagctgaacactcagttagctgaggcagaggctgcacttgaggcgcggaag 440 |||||||||||||| || | |||||| |||||||| ||||||||||||||||| | ||| Sbjct: 22284123 caactggaaaagctaaataatcagttggctgaggctgaggctgcacttgaggcaagaaag 22284182 Query: 441 aaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtcattgatgaatgg 500 |||||||| ||||||||||| || || |||||||| |||||||||||||| ||||||||| Sbjct: 22284183 aaacctcctgaagagaatggcccaaagattgttggcgaagggcttgtcatcgatgaatgg 22284242 Score = 119 bits (60), Expect = 2e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 22282226 agttccaaacaactgcacccaagagctgcttcatgcgtcctcctggagccatacttgccc 22282285 Query: 163 ctggcgagactatcatagcgactg 186 |||| ||||| |||||||| |||| Sbjct: 22282286 ctggggagaccatcatagcaactg 22282309 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 302 gtttgacgagcagaaagatcaggcagttgttgagaagatactgagggttgttttcttgga 361 |||||| ||||||| |||||| || || ||||||||||| |||||||||||||| ||| | Sbjct: 22283945 gtttgatgagcagagagatcaagccgtagttgagaagatcctgagggttgtttttttgaa 22284004 Query: 362 tgttcagaacccaggccca 380 |||| | || ||||||||| Sbjct: 22284005 tgttgaaaatccaggccca 22284023 Score = 67.9 bits (34), Expect = 6e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 510 agggaaagatacctcgctcaacaacaggtcgaagcggtcgactcagtgtaaattgtacc- 568 ||||||||||| || || ||||||||||| |||| ||| ||||||||||||||||| || Sbjct: 22284341 agggaaagatatcttgcacaacaacaggttgaagtggttgactcagtgtaaattgtgcct 22284400 Query: 569 ttcttctgct 578 |||||||||| Sbjct: 22284401 ttcttctgct 22284410 Score = 63.9 bits (32), Expect = 9e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 37 aaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagcaagtcacatgtag 96 |||||||| | ||||| | ||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 22282011 aaccaggacaacaggtgaggagcgcaatcaggataaagaacacaagcaagtctcatgtag 22282070 Query: 97 catt 100 |||| Sbjct: 22282071 catt 22282074 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 tcgatccgtcaaacaagctctacttcccat 33 |||||||| | ||||||||||||||||||| Sbjct: 22280679 tcgatccgcccaacaagctctacttcccat 22280708
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 178 bits (90), Expect = 2e-41 Identities = 108/114 (94%) Strand = Plus / Plus Query: 186 gttttcaagtttgtcgagcacccagagaataatgagaatgttctgcagaagtgcaaggtc 245 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 87651 gttttcaagtttgtcgagcacccagagaacaatgagaatgttctacagaagtgcaaggtt 87710 Query: 246 aagttcaagattttgagcttgaaggtcaaaggacccatggaatatgcaccagaa 299 || |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 87711 aaattcaagattttgagcttgaaggtcaaaggacccatggattacgcaccagaa 87764 Score = 127 bits (64), Expect = 7e-26 Identities = 106/120 (88%) Strand = Plus / Plus Query: 381 caactggaaaagctgaacactcagttagctgaggcagaggctgcacttgaggcgcggaag 440 |||||||||||||| || | |||||| |||||||| ||||||||||||||||| | ||| Sbjct: 89369 caactggaaaagctaaataatcagttggctgaggctgaggctgcacttgaggcaagaaag 89428 Query: 441 aaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtcattgatgaatgg 500 |||||||| ||||||||||| || || |||||||| |||||||||||||| ||||||||| Sbjct: 89429 aaacctcctgaagagaatggcccaaagattgttggcgaagggcttgtcatcgatgaatgg 89488 Score = 119 bits (60), Expect = 2e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 87472 agttccaaacaactgcacccaagagctgcttcatgcgtcctcctggagccatacttgccc 87531 Query: 163 ctggcgagactatcatagcgactg 186 |||| ||||| |||||||| |||| Sbjct: 87532 ctggggagaccatcatagcaactg 87555 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 302 gtttgacgagcagaaagatcaggcagttgttgagaagatactgagggttgttttcttgga 361 |||||| ||||||| |||||| || || ||||||||||| |||||||||||||| ||| | Sbjct: 89191 gtttgatgagcagagagatcaagccgtagttgagaagatcctgagggttgtttttttgaa 89250 Query: 362 tgttcagaacccaggccca 380 |||| | || ||||||||| Sbjct: 89251 tgttgaaaatccaggccca 89269 Score = 67.9 bits (34), Expect = 6e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 510 agggaaagatacctcgctcaacaacaggtcgaagcggtcgactcagtgtaaattgtacc- 568 ||||||||||| || || ||||||||||| |||| ||| ||||||||||||||||| || Sbjct: 89587 agggaaagatatcttgcacaacaacaggttgaagtggttgactcagtgtaaattgtgcct 89646 Query: 569 ttcttctgct 578 |||||||||| Sbjct: 89647 ttcttctgct 89656 Score = 63.9 bits (32), Expect = 9e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 37 aaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagcaagtcacatgtag 96 |||||||| | ||||| | ||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 87257 aaccaggacaacaggtgaggagcgcaatcaggataaagaacacaagcaagtctcatgtag 87316 Query: 97 catt 100 |||| Sbjct: 87317 catt 87320 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Plus Query: 4 tcgatccgtcaaacaagctctacttcccat 33 |||||||| | ||||||||||||||||||| Sbjct: 85925 tcgatccgcccaacaagctctacttcccat 85954
>emb|BX827571.1|CNS0A2R4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1168 Score = 151 bits (76), Expect = 5e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 471 gagtgctattaagattaagaatacaagcaaatcacatgtagccttcaagtttcaaacaac 530 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 531 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 590 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 591 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 638 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 848 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 907 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 908 atcgatgaatggaaggag 925
>ref|NM_118265.2| Arabidopsis thaliana structural molecule (AT4G21450) mRNA, complete cds Length = 1219 Score = 143 bits (72), Expect = 1e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 494 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaagtttcaaacaac 553 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 554 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 613 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 614 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 661 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 870 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 929 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 930 atcgatgaatggaaggag 947
>ref|NM_202855.1| Arabidopsis thaliana structural molecule (AT4G21450) mRNA, complete cds Length = 1480 Score = 143 bits (72), Expect = 1e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 494 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaagtttcaaacaac 553 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 554 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 613 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 614 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 661 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 1131 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 1190 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 1191 atcgatgaatggaaggag 1208
>gb|AY096741.1| Arabidopsis thaliana putative membrane associated protein (At4g21450) mRNA, complete cds Length = 919 Score = 143 bits (72), Expect = 1e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 381 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaagtttcaaacaac 440 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 441 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 500 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 501 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 548 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 757 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 816 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 817 atcgatgaatggaaggag 834
>gb|AY070416.1| Arabidopsis thaliana putative membrane associated protein (At4g21450) mRNA, complete cds Length = 1200 Score = 143 bits (72), Expect = 1e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 459 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaagtttcaaacaac 518 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 519 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 578 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 579 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 626 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 835 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 894 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 895 atcgatgaatggaaggag 912
>emb|BX827866.1|CNS0A306 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1064 Score = 143 bits (72), Expect = 1e-30 Identities = 144/168 (85%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 377 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaagtttcaaacaac 436 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || |||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 437 tgcgccgaagagttgctttatgcgtccacctggtgctattcttgctcctggagagactat 496 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 497 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 544 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 753 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 812 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 813 atcgatgaatggaaggag 830
>gb|AY087306.1| Arabidopsis thaliana clone 33975 mRNA, complete sequence Length = 1201 Score = 127 bits (64), Expect = 7e-26 Identities = 142/168 (84%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaagtttcaaacaac 115 |||||| |||| ||| || ||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 491 gagtgctattaagattaaaaataccagcaaatcacatgtagccttcaagtttcaaacaac 550 Query: 116 tgcacccaagagttgctttatgcgtcctcctggagccatacttgcccctggcgagactat 175 ||| || ||||||||||| |||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 551 tgcgccgaagagttgcttcatgcgtccacctggtgctattcttgctcctggagagactat 610 Query: 176 catagcgactgttttcaagtttgtcgagcacccagagaataatgagaa 223 || || ||||| || || ||||| |||| || |||||||||||||| Sbjct: 611 tattgctactgtgtttaaatttgttgagcctcctgagaataatgagaa 658 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 429 gaggcgcggaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtc 488 ||||| || |||||||||||||| || | ||||| || || |||| ||||||||||| Sbjct: 867 gaggcacgaaagaaacctccagaggaaacaggtccaaagatgattggagaagggcttgtg 926 Query: 489 attgatgaatggaaggag 506 || ||||||||||||||| Sbjct: 927 atcgatgaatggaaggag 944
>gb|AY107128.1| Zea mays PCO069400 mRNA sequence Length = 1375 Score = 121 bits (61), Expect = 5e-24 Identities = 382/489 (78%) Strand = Plus / Plus Query: 17 caagctctacttcccatatgaaccaggaaagcaggtcaagagtgcaattaggataaagaa 76 ||||||||||||||||||||| || || ||||| ||| ||| || | ||||| ||||| Sbjct: 368 caagctctacttcccatatgagcccggcaagcaagtccggagcgcggtcaggatcaagaa 427 Query: 77 tacaagcaagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttat 136 | |||||||| ||||| || |||||||| ||||| |||||||| ||||||||||| || Sbjct: 428 catcagcaagtcccatgtggccttcaagttccaaacgactgcaccaaagagttgcttcat 487 Query: 137 gcgtcctcctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtt 196 | | ||||| || | | ||||| || || || | |||||||| || ||||||||||| Sbjct: 488 gaggcctccgggcggtgtgcttgctccaggggaaagcatcatagcaacagttttcaagtt 547 Query: 197 tgtcgagcacccagagaataatgagaatgttctgcagaagtgcaaggtcaagttcaagat 256 ||| ||||| || ||||| || ||||| || | ||||||||||| ||||| ||||| Sbjct: 548 tgtggagcatccggagaacaacgagaagccgatggacaagtgcaaggttaagtttaagat 607 Query: 257 tttgagcttgaaggtcaaaggacccatggaatatgcaccagaattgtttgacgagcagaa 316 | | ||| |||| |||||||| || |||| || | || ||| ||||||| |||||||| Sbjct: 608 tgtcagcctgaaagtcaaagggccggtggagtacgtccctgaactgtttgatgagcagaa 667 Query: 317 agatcaggcagttgttgagaagatactgagggttgttttcttggatgttcagaacccagg 376 || |||| | || ||| | ||| || |||| || |||||||||| | || |||| | Sbjct: 668 ggaccaggtcgcggtcgagcaaatattgcgggtagtattcttggatgctgagcgcccaag 727 Query: 377 cccacaactggaaaagctgaacactcagttagctgaggcagaggctgcacttgaggcgcg 436 ||||||| |||| || || || ||| ||||||| ||||| || || |||||||| || Sbjct: 728 cccacaaatggacaaactcaagcgccagctagctgaagcagaagcagcccttgaggcacg 787 Query: 437 gaagaaacctccagaagagaatggtcctaaaattgttggtgaagggcttgtcattgatga 496 |||||||||||||| || |||||||| |||||||||||||| ||||| ||||| || Sbjct: 788 caagaaacctccagaggacaatggtccccgtattgttggtgaaggccttgtgattgacga 847 Query: 497 atggaagga 505 ||||||||| Sbjct: 848 atggaagga 856
>ref|NM_116745.2| Arabidopsis thaliana structural molecule (AT4G05060) mRNA, complete cds Length = 1207 Score = 105 bits (53), Expect = 3e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 24 tacttcccatatgaaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagc 83 |||||||| ||||| || || ||||| |||| |||||| |||| ||| |||||||| ||| Sbjct: 488 tacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaagaatacgagc 547 Query: 84 aagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcct 143 |||||||||||||| || |||||||||||||| | ||| ||||||||||| ||||| || Sbjct: 548 aagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttcatgcgcccg 607 Query: 144 cctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtcgag 203 |||| || || ||||| || || || || || || ||||||||||||||||| ||| Sbjct: 608 gctggtgctattcttgctcccggggaagaaattatcgcaactgttttcaagtttgttgag 667 Query: 204 cacccagagaataatga 220 | || ||||||||||| Sbjct: 668 cctcctgagaataatga 684
>gb|AY143842.1| Arabidopsis thaliana At4g05060/T32N4_12 mRNA, complete cds Length = 864 Score = 105 bits (53), Expect = 3e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 24 tacttcccatatgaaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagc 83 |||||||| ||||| || || ||||| |||| |||||| |||| ||| |||||||| ||| Sbjct: 325 tacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaagaatacgagc 384 Query: 84 aagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcct 143 |||||||||||||| || |||||||||||||| | ||| ||||||||||| ||||| || Sbjct: 385 aagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttcatgcgcccg 444 Query: 144 cctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtcgag 203 |||| || || ||||| || || || || || || ||||||||||||||||| ||| Sbjct: 445 gctggtgctattcttgctcccggggaagaaattatcgcaactgttttcaagtttgttgag 504 Query: 204 cacccagagaataatga 220 | || ||||||||||| Sbjct: 505 cctcctgagaataatga 521
>gb|AY094468.1| Arabidopsis thaliana AT4g05060/T32N4_12 mRNA, complete cds Length = 1208 Score = 105 bits (53), Expect = 3e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 24 tacttcccatatgaaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagc 83 |||||||| ||||| || || ||||| |||| |||||| |||| ||| |||||||| ||| Sbjct: 488 tacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaagaatacgagc 547 Query: 84 aagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcct 143 |||||||||||||| || |||||||||||||| | ||| ||||||||||| ||||| || Sbjct: 548 aagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttcatgcgcccg 607 Query: 144 cctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtcgag 203 |||| || || ||||| || || || || || || ||||||||||||||||| ||| Sbjct: 608 gctggtgctattcttgctcccggggaagaaattatcgcaactgttttcaagtttgttgag 667 Query: 204 cacccagagaataatga 220 | || ||||||||||| Sbjct: 668 cctcctgagaataatga 684
>gb|AY087509.1| Arabidopsis thaliana clone 36198 mRNA, complete sequence Length = 1073 Score = 105 bits (53), Expect = 3e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 24 tacttcccatatgaaccaggaaagcaggtcaagagtgcaattaggataaagaatacaagc 83 |||||||| ||||| || || ||||| |||| |||||| |||| ||| |||||||| ||| Sbjct: 390 tacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaagaatacgagc 449 Query: 84 aagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcct 143 |||||||||||||| || |||||||||||||| | ||| ||||||||||| ||||| || Sbjct: 450 aagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttcatgcgcccg 509 Query: 144 cctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtcgag 203 |||| || || ||||| || || || || || || ||||||||||||||||| ||| Sbjct: 510 gctggtgctattcttgctcccggggaagaaattatcgcaactgttttcaagtttgttgag 569 Query: 204 cacccagagaataatga 220 | || ||||||||||| Sbjct: 570 cctcctgagaataatga 586
>ref|NM_001067507.1| Oryza sativa (japonica cultivar-group) Os08g0141300 (Os08g0141300) mRNA, complete cds Length = 1286 Score = 101 bits (51), Expect = 4e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 81 agcaagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgt 140 |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| ||| | Sbjct: 431 agcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttcatgagg 490 Query: 141 cctcctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtc 200 ||||| || | |||||||| || || |||| |||||||| || || ||||||||||| Sbjct: 491 cctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaagtttgtg 550 Query: 201 gagcacccagagaataatgagaa 223 ||||| || |||||||||||||| Sbjct: 551 gagcatcctgagaataatgagaa 573 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 584 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 643 Query: 291 gcaccagaattgtttgacgagcagaaa 317 | |||||| ||||||| ||||||||| Sbjct: 644 gtcccagaactgtttgatgagcagaaa 670 Score = 73.8 bits (37), Expect = 9e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 761 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 820 Query: 468 attgttggtgaagggcttgtcattgatgaatggaaggagaggagggaaagatacctcgct 527 |||||||||||||| ||||| |||||||||||||||||| | || || |||||||| ||| Sbjct: 821 attgttggtgaaggccttgtaattgatgaatggaaggagcgaagagagagataccttgct 880 Query: 528 c 528 | Sbjct: 881 c 881
>dbj|AK058337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D04, full insert sequence Length = 1285 Score = 101 bits (51), Expect = 4e-18 Identities = 120/143 (83%) Strand = Plus / Plus Query: 81 agcaagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgt 140 |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| ||| | Sbjct: 443 agcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttcatgagg 502 Query: 141 cctcctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtc 200 ||||| || | |||||||| || || |||| |||||||| || || ||||||||||| Sbjct: 503 cctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaagtttgtg 562 Query: 201 gagcacccagagaataatgagaa 223 ||||| || |||||||||||||| Sbjct: 563 gagcatcctgagaataatgagaa 585 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 596 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 655 Query: 291 gcaccagaattgtttgacgagcagaaa 317 | |||||| ||||||| ||||||||| Sbjct: 656 gtcccagaactgtttgatgagcagaaa 682 Score = 73.8 bits (37), Expect = 9e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 773 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 832 Query: 468 attgttggtgaagggcttgtcattgatgaatggaaggagaggagggaaagatacctcgct 527 |||||||||||||| ||||| |||||||||||||||||| | || || |||||||| ||| Sbjct: 833 attgttggtgaaggccttgtaattgatgaatggaaggagcgaagagagagataccttgct 892 Query: 528 c 528 | Sbjct: 893 c 893
>gb|AC146792.27| Medicago truncatula clone mth2-32m20, complete sequence Length = 125714 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 ||||||||||||||||||| || ||||| || ||||||||||||||||| || ||||| | Sbjct: 107988 agtttcaaacaactgcaccaaaaagttgtttcatgcgtcctcctggagctatccttgcac 107929 Query: 163 ctggcgagactatcatagc 181 ||||||||| ||||||||| Sbjct: 107928 ctggcgagagtatcatagc 107910 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 402 cagttagctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggt 461 ||||| ||||| || || ||||| ||||| | |||||||||||| ||||||| || Sbjct: 107262 cagttggctgatgctgatgctgcccttgaagaacggaagaaacctgcagaagatgcaggg 107203 Query: 462 cctaaaattgttggtgaagggcttgtcattgatgaatgg 500 ||||||||| |||||||||||||||||||||| |||||| Sbjct: 107202 cctaaaattattggtgaagggcttgtcattgacgaatgg 107164
>gb|AC149642.2| Medicago truncatula chromosome 2 BAC clone mth2-62p11, complete sequence Length = 95165 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Minus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 ||||||||||||||||||| || ||||| || ||||||||||||||||| || ||||| | Sbjct: 8030 agtttcaaacaactgcaccaaaaagttgtttcatgcgtcctcctggagctatccttgcac 7971 Query: 163 ctggcgagactatcatagc 181 ||||||||| ||||||||| Sbjct: 7970 ctggcgagagtatcatagc 7952 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 402 cagttagctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggt 461 ||||| ||||| || || ||||| ||||| | |||||||||||| ||||||| || Sbjct: 7304 cagttggctgatgctgatgctgcccttgaagaacggaagaaacctgcagaagatgcaggg 7245 Query: 462 cctaaaattgttggtgaagggcttgtcattgatgaatgg 500 ||||||||| |||||||||||||||||||||| |||||| Sbjct: 7244 cctaaaattattggtgaagggcttgtcattgacgaatgg 7206
>dbj|AK067917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123E21, full insert sequence Length = 1287 Score = 93.7 bits (47), Expect = 1e-15 Identities = 120/143 (83%), Gaps = 1/143 (0%) Strand = Plus / Plus Query: 81 agcaagtcacatgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgt 140 |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| ||| | Sbjct: 432 agcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttcatg-gg 490 Query: 141 cctcctggagccatacttgcccctggcgagactatcatagcgactgttttcaagtttgtc 200 ||||| || | |||||||| || || |||| |||||||| || || ||||||||||| Sbjct: 491 cctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaagtttgtg 550 Query: 201 gagcacccagagaataatgagaa 223 ||||| || |||||||||||||| Sbjct: 551 gagcatcctgagaataatgagaa 573 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 584 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 643 Query: 291 gcaccagaattgtttgacgagcagaaa 317 | |||||| ||||||| ||||||||| Sbjct: 644 gtcccagaactgtttgatgagcagaaa 670 Score = 73.8 bits (37), Expect = 9e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 761 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 820 Query: 468 attgttggtgaagggcttgtcattgatgaatggaaggagaggagggaaagatacctcgct 527 |||||||||||||| ||||| |||||||||||||||||| | || || |||||||| ||| Sbjct: 821 attgttggtgaaggccttgtaattgatgaatggaaggagcgaagagagagataccttgct 880 Query: 528 c 528 | Sbjct: 881 c 881
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55 Length = 194916 Score = 81.8 bits (41), Expect = 4e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 |||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| | Sbjct: 44994 agtttcaaacaactgcgccgaagagttgctttatgcgtccacctggtgctattcttgctc 45053 Query: 163 ctggcgagactat 175 |||| |||||||| Sbjct: 45054 ctggagagactat 45066 Score = 50.1 bits (25), Expect = 0.014 Identities = 43/49 (87%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaag 104 |||||| |||| ||| || ||||||||||| ||||||||||| |||||| Sbjct: 44868 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaag 44916
>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project) Length = 95266 Score = 81.8 bits (41), Expect = 4e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggagccatacttgccc 162 |||||||||||||||| || |||||||||||||||||||| ||||| || || ||||| | Sbjct: 31986 agtttcaaacaactgcgccgaagagttgctttatgcgtccacctggtgctattcttgctc 32045 Query: 163 ctggcgagactat 175 |||| |||||||| Sbjct: 32046 ctggagagactat 32058 Score = 50.1 bits (25), Expect = 0.014 Identities = 43/49 (87%) Strand = Plus / Plus Query: 56 gagtgcaattaggataaagaatacaagcaagtcacatgtagcattcaag 104 |||||| |||| ||| || ||||||||||| ||||||||||| |||||| Sbjct: 31860 gagtgctattaagattaaaaatacaagcaaatcacatgtagccttcaag 31908
>gb|L38744.1|PS30129E Pisolithus tinctorius (F00010) mRNA, EST0129 Length = 351 Score = 71.9 bits (36), Expect = 4e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 90 catgtagcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcc 145 ||||||||||||||||| ||||||||||| ||||||||||||| ||||| ||||| Sbjct: 16 catgtagcattcaagttccaaacaactgcccccaagagttgctacatgcggcctcc 71
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 2300996 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 2301055 Query: 291 g 291 | Sbjct: 2301056 g 2301056 Score = 58.0 bits (29), Expect = 6e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 2301527 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 2301586 Query: 468 attgttggtgaagggcttgtcattgatgaatgg 500 |||||||||||||| ||||| |||||||||||| Sbjct: 2301587 attgttggtgaaggccttgtaattgatgaatgg 2301619 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 ttcaagtttgtcgagcacccagagaataatgagaa 223 ||||||||||| ||||| || |||||||||||||| Sbjct: 2300951 ttcaagtttgtggagcatcctgagaataatgagaa 2300985
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 48495 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 48554 Query: 291 g 291 | Sbjct: 48555 g 48555 Score = 58.0 bits (29), Expect = 6e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 49026 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 49085 Query: 468 attgttggtgaagggcttgtcattgatgaatgg 500 |||||||||||||| ||||| |||||||||||| Sbjct: 49086 attgttggtgaaggccttgtaattgatgaatgg 49118 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 ttcaagtttgtcgagcacccagagaataatgagaa 223 ||||||||||| ||||| || |||||||||||||| Sbjct: 48450 ttcaagtttgtggagcatcctgagaataatgagaa 48484
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 231 cagaagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatat 290 |||||||||||||| |||||||||||| | || |||||||||||||||| ||||| ||| Sbjct: 99123 cagaagtgcaaggttaagttcaagattgtcagtctgaaggtcaaaggacctatggagtat 99182 Query: 291 g 291 | Sbjct: 99183 g 99183 Score = 58.0 bits (29), Expect = 6e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 408 gctgaggcagaggctgcacttgaggcgcggaagaaacctccagaagagaatggtcctaaa 467 ||||| |||||||| |||||||| || || |||||||||||||| || | || || Sbjct: 99654 gctgaagcagaggcagcacttgaagcacgcaagaaacctccagaggacaccggcccccgc 99713 Query: 468 attgttggtgaagggcttgtcattgatgaatgg 500 |||||||||||||| ||||| |||||||||||| Sbjct: 99714 attgttggtgaaggccttgtaattgatgaatgg 99746 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 189 ttcaagtttgtcgagcacccagagaataatgagaa 223 ||||||||||| ||||| || |||||||||||||| Sbjct: 99078 ttcaagtttgtggagcatcctgagaataatgagaa 99112
>gb|AY111322.1| Zea mays CL6452_2 mRNA sequence Length = 688 Score = 61.9 bits (31), Expect = 4e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 234 aagtgcaaggtcaagttcaagattttgagcttgaaggtcaaaggacccatggaatatgca 293 ||||||||||| |||||||||||| | ||| |||| |||||||| || |||| |||| Sbjct: 39 aagtgcaaggttaagttcaagattgtcagcctgaaagtcaaagggccggtggagtatgtc 98 Query: 294 ccagaattgtttgacgagcagaa 316 || ||||||||||| |||||||| Sbjct: 99 cctgaattgtttgatgagcagaa 121 Score = 42.1 bits (21), Expect = 3.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 468 attgttggtgaagggcttgtcattgatgaatggaaggagaggagggaaagatacctcgct 527 ||||| || ||||| ||||| || |||||||||||||| | || || |||||||||||| Sbjct: 273 attgtcggcgaaggccttgtgatcgatgaatggaaggaacgaagagagagatacctcgct 332 Query: 528 c 528 | Sbjct: 333 c 333
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 45 aagcaggtcaagagtgcaattaggataaagaatacaagcaagtcacatgtagc 97 ||||| |||| |||||| |||| ||| |||||||| ||||||||||||||||| Sbjct: 123351 aagcaagtcaggagtgccattaagattaagaatacgagcaagtcacatgtagc 123299 Score = 42.1 bits (21), Expect = 3.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcg 139 ||||||||||||| | ||| ||||||||||| ||||| Sbjct: 123206 agtttcaaacaacagtaccaaagagttgcttcatgcg 123170
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 45 aagcaggtcaagagtgcaattaggataaagaatacaagcaagtcacatgtagc 97 ||||| |||| |||||| |||| ||| |||||||| ||||||||||||||||| Sbjct: 129758 aagcaagtcaggagtgccattaagattaagaatacgagcaagtcacatgtagc 129810 Score = 42.1 bits (21), Expect = 3.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcg 139 ||||||||||||| | ||| ||||||||||| ||||| Sbjct: 129903 agtttcaaacaacagtaccaaagagttgcttcatgcg 129939
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 Length = 80196 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 45 aagcaggtcaagagtgcaattaggataaagaatacaagcaagtcacatgtagc 97 ||||| |||| |||||| |||| ||| |||||||| ||||||||||||||||| Sbjct: 61826 aagcaagtcaggagtgccattaagattaagaatacgagcaagtcacatgtagc 61774 Score = 42.1 bits (21), Expect = 3.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcg 139 ||||||||||||| | ||| ||||||||||| ||||| Sbjct: 61681 agtttcaaacaacagtaccaaagagttgcttcatgcg 61645
>gb|BT025794.1| Arabidopsis thaliana At5g54110 mRNA, complete cds Length = 801 Score = 54.0 bits (27), Expect = 9e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 96 gcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 ||||| ||||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 328 gcatttaagttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 382 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Plus Query: 183 actgttttcaagtttgtcgagcacccagagaataatga 220 ||||| ||||||||||| ||||| |||||||| ||||| Sbjct: 415 actgtgttcaagtttgtggagcatccagagaacaatga 452
>ref|NM_124791.2| Arabidopsis thaliana ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule (ATMAMI) mRNA, complete cds Length = 1177 Score = 54.0 bits (27), Expect = 9e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 96 gcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 ||||| ||||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 470 gcatttaagttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 524
>dbj|AK221411.1| Arabidopsis thaliana mRNA for membrane associated protein, partial cds, clone: RAFL03-05-C07 Length = 768 Score = 54.0 bits (27), Expect = 9e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 96 gcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 ||||| ||||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 396 gcatttaagttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 450
>emb|BX841749.1|CNS09YJR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1042 Score = 54.0 bits (27), Expect = 9e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 96 gcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 ||||| ||||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 396 gcatttaagttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 450
>gb|U83655.1|ATU83655 Arabidopsis thaliana membrane associated protein mRNA, complete cds Length = 1182 Score = 54.0 bits (27), Expect = 9e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 96 gcattcaagtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 ||||| ||||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 464 gcatttaagttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 518
>dbj|AB018115.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJP23 Length = 31827 Score = 48.1 bits (24), Expect = 0.054 Identities = 42/48 (87%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 |||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 24948 agttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 24995
>emb|BX830481.1|CNS0A041 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 48.1 bits (24), Expect = 0.054 Identities = 42/48 (87%) Strand = Plus / Plus Query: 103 agtttcaaacaactgcacccaagagttgctttatgcgtcctcctggag 150 |||| |||||||| ||||| |||||||| | |||||||||||| |||| Sbjct: 651 agttccaaacaacggcacctaagagttgttatatgcgtcctcccggag 698
>emb|CR548634.10| Zebrafish DNA sequence from clone CH211-145D10 in linkage group 23, complete sequence Length = 153164 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 44228 tggtttgttaatgatgtattttt 44250
>emb|CT027567.10| Zebrafish DNA sequence from clone DKEY-31E3 in linkage group 23, complete sequence Length = 158422 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 40471 tggtttgttaatgatgtattttt 40493
>emb|BX005399.30| Zebrafish DNA sequence from clone DKEY-3D16 in linkage group 8, complete sequence Length = 193926 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 136256 tggtttgttaatgatgtattttt 136234
>emb|CR786581.30| Zebrafish DNA sequence from clone DKEY-179C19 in linkage group 8, complete sequence Length = 166217 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 94981 tggtttgttaatgatgtattttt 94959
>gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome 5, complete sequence Length = 176338 Score = 46.1 bits (23), Expect = 0.21 Identities = 26/27 (96%) Strand = Plus / Minus Query: 483 cttgtcattgatgaatggaaggagagg 509 ||||||||| ||||||||||||||||| Sbjct: 69254 cttgtcattcatgaatggaaggagagg 69228
>emb|CR788303.14| Zebrafish DNA sequence from clone DKEY-178E17 in linkage group 8, complete sequence Length = 175313 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 153729 tggtttgttaatgatgtattttt 153707
>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1, complete sequence Length = 212798 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 167457 tggtttgttaatgatgtattttt 167479
>emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in linkage group 8, complete sequence Length = 222110 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 35595 tggtttgttaatgatgtattttt 35573
>emb|CR376730.13| Zebrafish DNA sequence from clone CH211-205A14 in linkage group 20, complete sequence Length = 156481 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 68176 tggtttgttaatgatgtattttt 68198
>emb|BX957361.10| Zebrafish DNA sequence from clone DKEY-269O24 in linkage group 4 Contains two novel genes and a CpG island, complete sequence Length = 116445 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 46880 tggtttgttaatgatgtattttt 46902
>emb|AL807378.5| Zebrafish DNA sequence from clone CH211-215A18 in linkage group 7 Contains three CpG islands, complete sequence Length = 198700 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 136460 tggtttgttaatgatgtattttt 136482
>emb|BX247865.15| Zebrafish DNA sequence from clone CH211-205J13 in linkage group 8, complete sequence Length = 169286 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 37675 tggtttgttaatgatgtattttt 37697 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 89652 tggtttgttaatgatgtattttt 89674
>emb|BX649556.9| Zebrafish DNA sequence from clone DKEY-29M1 in linkage group 11, complete sequence Length = 197002 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 46477 tggtttgttaatgatgtattttt 46499
>emb|BX950224.7| Zebrafish DNA sequence from clone DKEY-284G18 in linkage group 18, complete sequence Length = 155246 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 60546 tggtttgttaatgatgtattttt 60524
>emb|BX005366.18| Zebrafish DNA sequence from clone DKEY-222J15 in linkage group 1, complete sequence Length = 162076 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 83810 tggtttgttaatgatgtattttt 83832
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 124028 tggtttgttaatgatgtattttt 124006
>emb|BX248083.4| Zebrafish DNA sequence from clone CH211-255B5 in linkage group 5, complete sequence Length = 148679 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 138228 tggtttgttaatgatgtattttt 138206
>emb|BX005242.6| Zebrafish DNA sequence from clone DKEY-67N17 in linkage group 16, complete sequence Length = 192177 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Minus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 184761 tggtttgttaatgatgtattttt 184739
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 150753 tggtttgttaatgatgtattttt 150775
>emb|CR392005.15| Zebrafish DNA sequence from clone DKEY-254K18 in linkage group 5, complete sequence Length = 55105 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattttt 839 ||||||||||||||||||||||| Sbjct: 9287 tggtttgttaatgatgtattttt 9309
>emb|Z98048.1|HS408N23 Human DNA sequence from clone RP3-408N23 on chromosome 22q13, complete sequence Length = 97916 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Minus Query: 819 gtttgttaatgatgtattttttttgt 844 |||||||||| ||||||||||||||| Sbjct: 24740 gtttgttaataatgtattttttttgt 24715
>emb|AL445258.4| Human DNA sequence from clone RP11-269F10 on chromosome Xq27.1-27.3 Contains STSs and GSSs, complete sequence Length = 175483 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 731 cagataaattaattggcttgtc 752 |||||||||||||||||||||| Sbjct: 24638 cagataaattaattggcttgtc 24617
>emb|AL662786.5| Mouse DNA sequence from clone RP23-340O10 on chromosome 11, complete sequence Length = 203337 Score = 44.1 bits (22), Expect = 0.85 Identities = 25/26 (96%) Strand = Plus / Plus Query: 448 cagaagagaatggtcctaaaattgtt 473 ||||||||||||||||| |||||||| Sbjct: 152375 cagaagagaatggtcctcaaattgtt 152400
>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence Length = 158673 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Minus Query: 818 ggtttgttaatgatgtattttt 839 |||||||||||||||||||||| Sbjct: 86499 ggtttgttaatgatgtattttt 86478
>ref|NM_001064208.1| Oryza sativa (japonica cultivar-group) Os06g0489500 (Os06g0489500) mRNA, complete cds Length = 5012 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 atggaaggagaggagggaaag 517 ||||||||||||||||||||| Sbjct: 945 atggaaggagaggagggaaag 965
>ref|XM_001157970.1| PREDICTED: Pan troglodytes F-box and WD-40 domain protein 2, transcript variant 2 (FBXW2), mRNA Length = 5392 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tgcagaagtgcaaggtcaagt 249 ||||||||||||||||||||| Sbjct: 820 tgcagaagtgcaaggtcaagt 840
>ref|XM_520223.2| PREDICTED: Pan troglodytes F-box and WD-40 domain protein 2, transcript variant 3 (FBXW2), mRNA Length = 5540 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tgcagaagtgcaaggtcaagt 249 ||||||||||||||||||||| Sbjct: 968 tgcagaagtgcaaggtcaagt 988
>ref|XM_001157864.1| PREDICTED: Pan troglodytes F-box and WD-40 domain protein 2, transcript variant 1 (FBXW2), mRNA Length = 5729 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tgcagaagtgcaaggtcaagt 249 ||||||||||||||||||||| Sbjct: 1157 tgcagaagtgcaaggtcaagt 1177
>emb|BX901890.16| Zebrafish DNA sequence from clone DKEY-265J11, complete sequence Length = 195144 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 tggtttgttaatgatgtattt 837 ||||||||||||||||||||| Sbjct: 129881 tggtttgttaatgatgtattt 129901
>gb|AC104117.2| Homo sapiens chromosome 5 clone RP11-281O15, complete sequence Length = 211975 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gttctgcagaagtgcaaggtcaagt 249 ||||||||||||||||| ||||||| Sbjct: 114513 gttctgcagaagtgcaaagtcaagt 114489
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 atggaaggagaggagggaaag 517 ||||||||||||||||||||| Sbjct: 16634803 atggaaggagaggagggaaag 16634823
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 atggaaggagaggagggaaag 517 ||||||||||||||||||||| Sbjct: 130783 atggaaggagaggagggaaag 130803
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 ctcgctcaacaacaggtcgaagcgg 546 |||||||||| |||||||||||||| Sbjct: 5847136 ctcgctcaacgacaggtcgaagcgg 5847112
>dbj|AK120595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147K17, full insert sequence Length = 5013 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 atggaaggagaggagggaaag 517 ||||||||||||||||||||| Sbjct: 946 atggaaggagaggagggaaag 966
>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence Length = 139970 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 476 tgaagggcttgtcattgatgaatgg 500 |||||| |||||||||||||||||| Sbjct: 64327 tgaaggtcttgtcattgatgaatgg 64351 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 179,577,959 Number of extensions: 9805301 Number of successful extensions: 217879 Number of sequences better than 10.0: 74 Number of HSP's gapped: 217867 Number of HSP's successfully gapped: 127 Length of query: 886 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 864 Effective length of database: 18,508,616,841 Effective search space: 15991444950624 Effective search space used: 15991444950624 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)