ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf78o07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os02g0317800:Os02g0317800 | 229 | 2e-60 | 2 | AK119798:Os10g0371000 | 36 | 0.034 | 3 | AK070069:Os10g0371000 | 36 | 0.034 | 4 | AK110796:Os01g0899700 | 31 | 1.1 | 5 | AK068276:Os12g0568900 | 31 | 1.1 | 6 | Os02g0113300:Os02g0113300 | 30 | 1.4 | 7 | AK072590:Os02g0113800 | 30 | 1.4 | 8 | Os11g0119900:Os11g0119900 | 30 | 2.4 | 9 | AK063278:Os12g0472800 | 29 | 4.2 | 10 | AK064705:Os09g0508200 | 28 | 5.4 | 11 | AK110228: | 28 | 7.1 | 12 | Os12g0604200:Os12g0604200 | 28 | 9.3 | 13 | AK109815:Os11g0175000 | 28 | 9.3 | 14 | AK106041:Os02g0677300 | 28 | 9.3 | 15 | AK060550:Os02g0677300 | 28 | 9.3 | 16 | Os05g0101500:Os05g0101500 | 28 | 9.3 |
|---|
>Os02g0317800:Os02g0317800 | Length = 155 Score = 229 bits (584), Expect = 2e-60 Identities = 104/121 (85%), Positives = 112/121 (92%) Frame = +2 Query: 224 WTGEIRGRVVCDVCADSAIGPEDHALEGAEVAVLCITKSGEVINYQAFTNYEGIYSVAET 403 WTGEIRG VVCDVC D+AIGPEDH LEGAEVAVLCIT+SGEVINYQAFTN +G+Y VAET Sbjct: 35 WTGEIRGHVVCDVCGDAAIGPEDHVLEGAEVAVLCITRSGEVINYQAFTNSKGVYIVAET 94 Query: 404 MPESDRWDSCLARPISSFHQHCTRRGDAHSGVKFTYNKHSGNSHSVKAFLYKPANIPLYC 583 MPESDRW+SCLARPISSFHQHCT+RGD HSGVKFTY+K SGNSH+VK FLYKPAN PLYC Sbjct: 95 MPESDRWESCLARPISSFHQHCTKRGDTHSGVKFTYSKPSGNSHTVKTFLYKPANAPLYC 154 Query: 584 S 586 S Sbjct: 155 S 155
>AK119798:Os10g0371000 | Length = 172 Score = 35.8 bits (81), Expect = 0.034 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 236 IRGRVVCDVCADSAIGPEDHALEGAEVAVLCITKS--GEVINYQAFTNYEGIYSV 394 +RGRV CD C P + GA+V V C +KS + +++ T++ G Y++ Sbjct: 40 VRGRVWCDTCLAGFETPASTYIAGAKVKVECRSKSTGAKTCSFEGQTDHTGTYNI 94
>AK070069:Os10g0371000 | Length = 172 Score = 35.8 bits (81), Expect = 0.034 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +2 Query: 236 IRGRVVCDVCADSAIGPEDHALEGAEVAVLCITKS--GEVINYQAFTNYEGIYSV 394 +RGRV CD C P + GA+V V C +KS + +++ T++ G Y++ Sbjct: 40 VRGRVWCDTCLAGFETPASTYIAGAKVKVECRSKSTGAKTCSFEGQTDHTGTYNI 94
>AK110796:Os01g0899700 | Length = 412 Score = 30.8 bits (68), Expect = 1.1 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = +2 Query: 233 EIRGRVVCDVCADSAIGPEDHA---LEGAEVAVLCITKSGEVINYQAFTNYEGIYSVAET 403 ++ G+V C C + A E H L+GA V V C ++ + +T G YSV+ T Sbjct: 50 KVIGKVYCYRCFNEAHPEESHGKEHLKGAMVKVTCQANDQALVGF-GYTQDNGKYSVSIT 108 Query: 404 -MPESDRW--DSC 433 +P S + DSC Sbjct: 109 GLPLSSTYGADSC 121
>AK068276:Os12g0568900 | Length = 230 Score = 30.8 bits (68), Expect = 1.1 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +2 Query: 224 WTGEIRGRVVCDVCADSAIGPEDHALEGAEVAVLCITKSGEVINY 358 W+G + R CD A G E A + VA L + G+V Y Sbjct: 73 WSGRVAARTGCDAAASPPAGCETGASPPSTVAQLSVHGGGDVATY 117
>Os02g0113300:Os02g0113300 | Length = 484 Score = 30.4 bits (67), Expect = 1.4 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +2 Query: 431 CLARP--ISSFHQHCTRRGDAHSGVKFTYNKHSGNSHSVKAFLYKP 562 CLARP +S HC R GD +FT + +H+ A L P Sbjct: 75 CLARPPRLSYLCVHCPRPGDGEGAYRFTVDPQVLGTHTDVALLRVP 120
>AK072590:Os02g0113800 | Length = 487 Score = 30.4 bits (67), Expect = 1.4 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = +2 Query: 431 CLARP--ISSFHQHCTRRGDAHSGVKFTYNKHSGNSHSVKAFLYKP 562 CLARP +S HC R GD +FT + +H+ A L P Sbjct: 75 CLARPPRLSYLCVHCPRPGDGEGAYRFTVDPRVLGTHTDVALLRVP 120
>Os11g0119900:Os11g0119900 | Length = 389 Score = 29.6 bits (65), Expect = 2.4 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 117 HPNPWRRRVLSFTGVCSRSTWPSSLSCLRRPLQP 218 H NPWR RV +G + + PS L RRP P Sbjct: 13 HTNPWRHRVSRCSGRPATRSAPSILWRRRRPRSP 46
>AK063278:Os12g0472800 | Length = 378 Score = 28.9 bits (63), Expect = 4.2 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = +2 Query: 236 IRGRVVCDVCADSAIGPEDHALEGAEVAVLCI------TKSGEVINYQAFTNYEGIYSV 394 + G V CD C+ S+ + L G +V + C+ +K I + TN G Y + Sbjct: 55 VTGTVFCDACSSSSFSNHSYFLPGVKVRIDCMISVKSASKEEIKITAEKVTNTFGAYQL 113
>AK064705:Os09g0508200 | Length = 262 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Frame = +2 Query: 242 GRVVCDVCADSAIGPEDHALEGAEVAVLCITKSGEV------INYQAFTNYEGIYSV 394 G V CD C+++ L+GA V + C K + + T+ G+Y + Sbjct: 40 GSVYCDACSNNTFSKHSFFLKGARVLIQCSFKVNSTMAEELSLEAERTTDQNGVYKL 96
>AK110228: | Length = 1551 Score = 28.1 bits (61), Expect = 7.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -2 Query: 479 PSSCNAGGSC*WASPGTSPTGRSPASS 399 PSS + G A+PG SP G +PASS Sbjct: 1385 PSSLSGGFGSGAAAPGASPFGGAPASS 1411
>Os12g0604200:Os12g0604200 | Length = 431 Score = 27.7 bits (60), Expect = 9.3 Identities = 13/22 (59%), Positives = 13/22 (59%) Frame = +2 Query: 248 VVCDVCADSAIGPEDHALEGAE 313 VV DVC D A P H LEG E Sbjct: 363 VVVDVCRDVAAWPGRHLLEGGE 384
>AK109815:Os11g0175000 | Length = 267 Score = 27.7 bits (60), Expect = 9.3 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -3 Query: 205 RRKQESEEGQVEREQTPVKERTRRRHGLGCLV 110 RR+Q+ + Q++ + T + R RRRHG LV Sbjct: 70 RRRQDPKVHQLDADSTGLLRRRRRRHGEDDLV 101
>AK106041:Os02g0677300 | Length = 224 Score = 27.7 bits (60), Expect = 9.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -3 Query: 472 RAMLVEAADGPRQARVPPVALRH 404 RA + AD PR+ RVPP+ H Sbjct: 104 RAACLNFADSPRRLRVPPIGASH 126
>AK060550:Os02g0677300 | Length = 224 Score = 27.7 bits (60), Expect = 9.3 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -3 Query: 472 RAMLVEAADGPRQARVPPVALRH 404 RA + AD PR+ RVPP+ H Sbjct: 104 RAACLNFADSPRRLRVPPIGASH 126
>Os05g0101500:Os05g0101500 | Length = 97 Score = 27.7 bits (60), Expect = 9.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -1 Query: 294 WSSGPMAESAQTSQTTRPRISP 229 WS GP AE A + RPR+ P Sbjct: 3 WSLGPAAEGAVVAAAERPRLRP 24 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,719,307 Number of extensions: 424604 Number of successful extensions: 1503 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1501 Number of HSP's successfully gapped: 16 Length of query: 261 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 162 Effective length of database: 11,435,796 Effective search space: 1852598952 Effective search space used: 1852598952 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
