ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf78o07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243319.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100056L07, full insert sequence Length = 715 Score = 335 bits (169), Expect = 1e-88 Identities = 307/353 (86%) Strand = Plus / Plus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 143 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 202 Query: 275 gccatcgggcccgaggaccacgccctcgaaggcgctgaggttgctgttctgtgcattacg 334 |||||||| ||||||||||||| ||||||||| || |||||||| || || ||||| ||| Sbjct: 203 gccatcggccccgaggaccacgtcctcgaaggtgccgaggttgccgtcctctgcatcacg 262 Query: 335 aaatctggtgaggtcatcaactaccaggcattcacaaactacgagggcatctacagtgtt 394 | ||||||||| || |||||||||||||| |||||||||| | |||| |||||| |||| Sbjct: 263 agatctggtgaagttatcaactaccaggccttcacaaactccaagggtgtctacattgtt 322 Query: 395 gcggagacgatgccggagagcgaccggtgggactcgtgcctggcgaggcccatcagcagc 454 |||||||||||||| ||||| ||||| ||||| || ||| |||| ||||||||||||||| Sbjct: 323 gcggagacgatgccagagagtgaccgttgggagtcatgcttggcaaggcccatcagcagc 382 Query: 455 ttccaccagcattgcacgaggaggggcgatgcacactctggggtcaagttcacatacaac 514 || |||||||||||||| | |||||| ||| ||||||||||||||||||||||||||| | Sbjct: 383 tttcaccagcattgcactaagaggggtgatacacactctggggtcaagttcacatacagc 442 Query: 515 aaacactcagggaactcgcacagcgttaaggcattcctgtacaagcctgccaa 567 || | ||||| ||||| |||| ||| ||| | ||||| |||||||||||||| Sbjct: 443 aagccttcaggaaactctcacaccgtcaagacgttcctctacaagcctgccaa 495
>ref|NM_001053210.1| Oryza sativa (japonica cultivar-group) Os02g0317800 (Os02g0317800) mRNA, complete cds Length = 468 Score = 335 bits (169), Expect = 1e-88 Identities = 307/353 (86%) Strand = Plus / Plus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 94 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 153 Query: 275 gccatcgggcccgaggaccacgccctcgaaggcgctgaggttgctgttctgtgcattacg 334 |||||||| ||||||||||||| ||||||||| || |||||||| || || ||||| ||| Sbjct: 154 gccatcggccccgaggaccacgtcctcgaaggtgccgaggttgccgtcctctgcatcacg 213 Query: 335 aaatctggtgaggtcatcaactaccaggcattcacaaactacgagggcatctacagtgtt 394 | ||||||||| || |||||||||||||| |||||||||| | |||| |||||| |||| Sbjct: 214 agatctggtgaagttatcaactaccaggccttcacaaactccaagggtgtctacattgtt 273 Query: 395 gcggagacgatgccggagagcgaccggtgggactcgtgcctggcgaggcccatcagcagc 454 |||||||||||||| ||||| ||||| ||||| || ||| |||| ||||||||||||||| Sbjct: 274 gcggagacgatgccagagagtgaccgttgggagtcatgcttggcaaggcccatcagcagc 333 Query: 455 ttccaccagcattgcacgaggaggggcgatgcacactctggggtcaagttcacatacaac 514 || |||||||||||||| | |||||| ||| ||||||||||||||||||||||||||| | Sbjct: 334 tttcaccagcattgcactaagaggggtgatacacactctggggtcaagttcacatacagc 393 Query: 515 aaacactcagggaactcgcacagcgttaaggcattcctgtacaagcctgccaa 567 || | ||||| ||||| |||| ||| ||| | ||||| |||||||||||||| Sbjct: 394 aagccttcaggaaactctcacaccgtcaagacgttcctctacaagcctgccaa 446
>emb|CT835486.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN054M03, full insert sequence Length = 547 Score = 327 bits (165), Expect = 3e-86 Identities = 306/353 (86%) Strand = Plus / Plus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 153 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 212 Query: 275 gccatcgggcccgaggaccacgccctcgaaggcgctgaggttgctgttctgtgcattacg 334 |||||||| ||||||||||||| ||||||||| || |||||||| || || ||||| ||| Sbjct: 213 gccatcggccccgaggaccacgtcctcgaaggtgccgaggttgccgtcctctgcatcacg 272 Query: 335 aaatctggtgaggtcatcaactaccaggcattcacaaactacgagggcatctacagtgtt 394 | ||||||||| || |||||||||||||| |||||||||| | |||| |||||| |||| Sbjct: 273 agatctggtgaagttatcaactaccaggccttcacaaactccaagggtgtctacattgtt 332 Query: 395 gcggagacgatgccggagagcgaccggtgggactcgtgcctggcgaggcccatcagcagc 454 | |||||||||||| ||||| ||||| ||||| || ||| |||| ||||||||||||||| Sbjct: 333 ggggagacgatgccagagagtgaccgttgggagtcatgcttggcaaggcccatcagcagc 392 Query: 455 ttccaccagcattgcacgaggaggggcgatgcacactctggggtcaagttcacatacaac 514 || |||||||||||||| | |||||| ||| ||||||||||||||||||||||||||| | Sbjct: 393 tttcaccagcattgcactaagaggggtgatacacactctggggtcaagttcacatacagc 452 Query: 515 aaacactcagggaactcgcacagcgttaaggcattcctgtacaagcctgccaa 567 || | ||||| ||||| |||| ||| ||| | ||||| |||||||||||||| Sbjct: 453 aagccttcaggaaactctcacaccgtcaagacgttcctctacaagcctgccaa 505
>gb|AY104587.1| Zea mays PCO104634 mRNA sequence Length = 903 Score = 293 bits (148), Expect = 5e-76 Identities = 301/352 (85%) Strand = Plus / Plus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 248 gccgaggcttggacgggggagatccgcggccgcgtcgtctgcgacgtctgcggcgacgca 307 Query: 275 gccatcgggcccgaggaccacgccctcgaaggcgctgaggttgctgttctgtgcattacg 334 |||||||| || |||||||||||||||||||| || ||||||||||| || ||||| || Sbjct: 308 gccatcggcccggaggaccacgccctcgaaggtgcggaggttgctgtcctctgcatcaca 367 Query: 335 aaatctggtgaggtcatcaactaccaggcattcacaaactacgagggcatctacagtgtt 394 |||||||||||||| |||||||| || || |||||||||| | ||||| | || | ||| Sbjct: 368 aaatctggtgaggttatcaactatcaagccttcacaaactccaagggcgtgtatactgtc 427 Query: 395 gcggagacgatgccggagagcgaccggtgggactcgtgcctggcgaggcccatcagcagc 454 || ||||| ||||||||||||||| |||||||||||||| |||||||||| || |||||| Sbjct: 428 gccgagactatgccggagagcgacaggtgggactcgtgcttggcgaggcctatgagcagc 487 Query: 455 ttccaccagcattgcacgaggaggggcgatgcacactctggggtcaagttcacatacaac 514 ||||| | |||||||| || |||| ||||| ||||||||||| |||||||| |||||| Sbjct: 488 ttccatctacattgcacacggcggggtgatgctcactctggggtgaagttcacttacaac 547 Query: 515 aaacactcagggaactcgcacagcgttaaggcattcctgtacaagcctgcca 566 ||| || |||||| |||||| ||| ||| | ||||| |||||||| |||| Sbjct: 548 aaatcgtctgggaacccgcacaccgtcaagcctttcctctacaagccggcca 599
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 224 bits (113), Expect = 4e-55 Identities = 221/257 (85%) Strand = Plus / Minus Query: 311 gaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccaggcattcaca 370 |||||||| || || ||||| |||| ||||||||| || |||||||||||||| |||||| Sbjct: 12629680 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 12629621 Query: 371 aactacgagggcatctacagtgttgcggagacgatgccggagagcgaccggtgggactcg 430 |||| | |||| |||||| |||||||||||||||||| ||||| ||||| ||||| || Sbjct: 12629620 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 12629561 Query: 431 tgcctggcgaggcccatcagcagcttccaccagcattgcacgaggaggggcgatgcacac 490 ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| ||||| Sbjct: 12629560 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 12629501 Query: 491 tctggggtcaagttcacatacaacaaacactcagggaactcgcacagcgttaaggcattc 550 |||||||||||||||||||||| ||| | ||||| ||||| |||| ||| ||| | ||| Sbjct: 12629500 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 12629441 Query: 551 ctgtacaagcctgccaa 567 || |||||||||||||| Sbjct: 12629440 ctctacaagcctgccaa 12629424 Score = 119 bits (60), Expect = 2e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 12632437 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 12632378 Query: 275 gccatcgggcccgaggaccacgccctcgaagg 306 |||||||| ||||||||||||| ||||||||| Sbjct: 12632377 gccatcggccccgaggaccacgtcctcgaagg 12632346
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 224 bits (113), Expect = 4e-55 Identities = 221/257 (85%) Strand = Plus / Minus Query: 311 gaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccaggcattcaca 370 |||||||| || || ||||| |||| ||||||||| || |||||||||||||| |||||| Sbjct: 26739 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 26680 Query: 371 aactacgagggcatctacagtgttgcggagacgatgccggagagcgaccggtgggactcg 430 |||| | |||| |||||| |||||||||||||||||| ||||| ||||| ||||| || Sbjct: 26679 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 26620 Query: 431 tgcctggcgaggcccatcagcagcttccaccagcattgcacgaggaggggcgatgcacac 490 ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| ||||| Sbjct: 26619 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 26560 Query: 491 tctggggtcaagttcacatacaacaaacactcagggaactcgcacagcgttaaggcattc 550 |||||||||||||||||||||| ||| | ||||| ||||| |||| ||| ||| | ||| Sbjct: 26559 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 26500 Query: 551 ctgtacaagcctgccaa 567 || |||||||||||||| Sbjct: 26499 ctctacaagcctgccaa 26483 Score = 119 bits (60), Expect = 2e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 29496 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 29437 Query: 275 gccatcgggcccgaggaccacgccctcgaagg 306 |||||||| ||||||||||||| ||||||||| Sbjct: 29436 gccatcggccccgaggaccacgtcctcgaagg 29405
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 224 bits (113), Expect = 4e-55 Identities = 221/257 (85%) Strand = Plus / Minus Query: 311 gaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccaggcattcaca 370 |||||||| || || ||||| |||| ||||||||| || |||||||||||||| |||||| Sbjct: 134213 gaggttgccgtcctctgcatcacgagatctggtgaagttatcaactaccaggccttcaca 134154 Query: 371 aactacgagggcatctacagtgttgcggagacgatgccggagagcgaccggtgggactcg 430 |||| | |||| |||||| |||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134153 aactccaagggtgtctacattgttgcggagacgatgccagagagtgaccgttgggagtca 134094 Query: 431 tgcctggcgaggcccatcagcagcttccaccagcattgcacgaggaggggcgatgcacac 490 ||| |||| ||||||||||||||||| |||||||||||||| | |||||| ||| ||||| Sbjct: 134093 tgcttggcaaggcccatcagcagctttcaccagcattgcactaagaggggtgatacacac 134034 Query: 491 tctggggtcaagttcacatacaacaaacactcagggaactcgcacagcgttaaggcattc 550 |||||||||||||||||||||| ||| | ||||| ||||| |||| ||| ||| | ||| Sbjct: 134033 tctggggtcaagttcacatacagcaagccttcaggaaactctcacaccgtcaagacgttc 133974 Query: 551 ctgtacaagcctgccaa 567 || |||||||||||||| Sbjct: 133973 ctctacaagcctgccaa 133957 Score = 119 bits (60), Expect = 2e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 215 gccgaagcgtggacgggggagatccgcggccgcgtcgtctgcgacgtctgcgccgactct 274 ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 136970 gccgaggcgtggacgggggagatccgcggccacgtcgtctgcgacgtctgcggggacgcc 136911 Query: 275 gccatcgggcccgaggaccacgccctcgaagg 306 |||||||| ||||||||||||| ||||||||| Sbjct: 136910 gccatcggccccgaggaccacgtcctcgaagg 136879
>ref|NM_124867.2| Arabidopsis thaliana unknown protein (AT5G54855) mRNA, complete cds Length = 679 Score = 85.7 bits (43), Expect = 2e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 302 gaaggcgctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccag 361 ||||| ||||||||||| ||||||||||| || |||||||| || || | |||||||| Sbjct: 259 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 318 Query: 362 gcattcacaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccgg 421 || |||||||||| | || |||||| ||||| ||||| ||||| |||||||| || Sbjct: 319 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 378 Query: 422 tgggactcgtgcctggcgaggcccatcagcagcttccac 460 |||||| | ||||| || || |||||||||||||||||| Sbjct: 379 tgggacgcttgccttgcaagacccatcagcagcttccac 417
>gb|AY093718.1| Arabidopsis thaliana AT1g27100/T7N9_16 mRNA, complete cds Length = 441 Score = 85.7 bits (43), Expect = 2e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 302 gaaggcgctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccag 361 ||||| ||||||||||| ||||||||||| || |||||||| || || | |||||||| Sbjct: 157 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 216 Query: 362 gcattcacaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccgg 421 || |||||||||| | || |||||| ||||| ||||| ||||| |||||||| || Sbjct: 217 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 276 Query: 422 tgggactcgtgcctggcgaggcccatcagcagcttccac 460 |||||| | ||||| || || |||||||||||||||||| Sbjct: 277 tgggacgcttgccttgcaagacccatcagcagcttccac 315
>gb|AF410270.1|AF410270 Arabidopsis thaliana unknown protein mRNA, complete cds Length = 636 Score = 85.7 bits (43), Expect = 2e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 302 gaaggcgctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccag 361 ||||| ||||||||||| ||||||||||| || |||||||| || || | |||||||| Sbjct: 216 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 275 Query: 362 gcattcacaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccgg 421 || |||||||||| | || |||||| ||||| ||||| ||||| |||||||| || Sbjct: 276 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 335 Query: 422 tgggactcgtgcctggcgaggcccatcagcagcttccac 460 |||||| | ||||| || || |||||||||||||||||| Sbjct: 336 tgggacgcttgccttgcaagacccatcagcagcttccac 374
>dbj|AK118946.1| Arabidopsis thaliana At5g54855 mRNA for unknown protein, complete cds, clone: RAFL21-28-L11 Length = 635 Score = 85.7 bits (43), Expect = 2e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 302 gaaggcgctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccag 361 ||||| ||||||||||| ||||||||||| || |||||||| || || | |||||||| Sbjct: 229 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 288 Query: 362 gcattcacaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccgg 421 || |||||||||| | || |||||| ||||| ||||| ||||| |||||||| || Sbjct: 289 gctttcacaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 348 Query: 422 tgggactcgtgcctggcgaggcccatcagcagcttccac 460 |||||| | ||||| || || |||||||||||||||||| Sbjct: 349 tgggacgcttgccttgcaagacccatcagcagcttccac 387
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 81.8 bits (41), Expect = 3e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 308 gctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccaggcattc 367 ||||||||||| ||||||||||| || |||||||| || || | |||||||| || ||| Sbjct: 42976 gctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaagctttc 43035 Query: 368 acaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccggtgggac 427 ||||||| | || |||||| ||||| ||||| ||||| |||||||| || |||||| Sbjct: 43036 acaaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgttgggac 43095 Query: 428 tcgtgcctggcgaggcccatcagcagcttccac 460 | ||||| || || |||||||||||||||||| Sbjct: 43096 gcttgccttgcaagacccatcagcagcttccac 43128
>gb|AY088675.1| Arabidopsis thaliana clone 9159 mRNA, complete sequence Length = 661 Score = 77.8 bits (39), Expect = 5e-11 Identities = 129/159 (81%) Strand = Plus / Plus Query: 302 gaaggcgctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccag 361 ||||| ||||||||||| ||||||||||| || |||||||| || || | |||||||| Sbjct: 259 gaaggagctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaa 318 Query: 362 gcattcacaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccgg 421 || ||||| |||| | || |||||| ||||| ||||| ||||| |||||||| || Sbjct: 319 gctttcactaactcaaaaggtgtctacacagttgcagagacaatgccagagagcgaacgt 378 Query: 422 tgggactcgtgcctggcgaggcccatcagcagcttccac 460 |||||| | ||||| || || |||||||||||||||||| Sbjct: 379 tgggacgcttgccttgcaagacccatcagcagcttccac 417
>emb|BX830033.1|CNS0A053 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1507 Score = 52.0 bits (26), Expect = 0.003 Identities = 119/150 (79%) Strand = Plus / Plus Query: 308 gctgaggttgctgttctgtgcattacgaaatctggtgaggtcatcaactaccaggcattc 367 ||||||||||| ||||||||||| || |||||||| || || | |||||||| || || Sbjct: 1134 gctgaggttgcggttctgtgcataaccaaatctggagaagttgtgaactaccaagctttt 1193 Query: 368 acaaactacgagggcatctacagtgttgcggagacgatgccggagagcgaccggtgggac 427 ||||||| | || |||| | ||||| ||||| ||||| |||||||| || |||||| Sbjct: 1194 acaaactcaaaaggtgtctaaacagttgcagagacaatgccagagagcgaacgttgggac 1253 Query: 428 tcgtgcctggcgaggcccatcagcagcttc 457 | | ||| || || ||||||||||||||| Sbjct: 1254 gcttcccttgcaagacccatcagcagcttc 1283
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 gccgcgtcgtctgcgacgtctgcgccg 269 ||||||||||||||| ||||||||||| Sbjct: 11355976 gccgcgtcgtctgcgccgtctgcgccg 11356002
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 gccgcgtcgtctgcgacgtctgcgccg 269 ||||||||||||||| ||||||||||| Sbjct: 67510 gccgcgtcgtctgcgccgtctgcgccg 67536
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 44.1 bits (22), Expect = 0.74 Identities = 25/26 (96%) Strand = Plus / Plus Query: 178 ggccctcctcgctttcctgcttgcgg 203 |||||||||||| ||||||||||||| Sbjct: 197376 ggccctcctcgccttcctgcttgcgg 197401
>gb|AY364845.1| Virus PhiCh1 pBgB51 capsid protein, int1, and capsid protein genes, complete cds Length = 5995 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgcggccgcgtcgtctgcgac 259 ||||||||||||||||||||| Sbjct: 5722 cgcggccgcgtcgtctgcgac 5742
>gb|AY364843.1| Virus PhiCh1 pBgB5 ORF34-5, integrase, and ORF36-5 genes, complete cds Length = 5995 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgcggccgcgtcgtctgcgac 259 ||||||||||||||||||||| Sbjct: 5722 cgcggccgcgtcgtctgcgac 5742
>gb|AF440695.1| Virus PhiCh1, complete genome Length = 58498 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 cgcggccgcgtcgtctgcgac 259 ||||||||||||||||||||| Sbjct: 27029 cgcggccgcgtcgtctgcgac 27049
>emb|AL116942.1|CNS01DKM Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gaaagagttgctcgtcatttc 27 ||||||||||||||||||||| Sbjct: 398 gaaagagttgctcgtcatttc 418
>emb|AL116070.1|CNS01CWE Botrytis cinerea strain T4 cDNA library Length = 660 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gaaagagttgctcgtcatttc 27 ||||||||||||||||||||| Sbjct: 398 gaaagagttgctcgtcatttc 418 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 102,118,424 Number of extensions: 4907780 Number of successful extensions: 91762 Number of sequences better than 10.0: 22 Number of HSP's gapped: 91756 Number of HSP's successfully gapped: 26 Length of query: 783 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 761 Effective length of database: 18,508,616,841 Effective search space: 14085057416001 Effective search space used: 14085057416001 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
