ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72k23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109063: | 37 | 0.11 | 2 | AK067471:Os01g0203000 | 33 | 0.90 | 3 | AK107926:Os01g0382000 | 32 | 2.0 | 4 | Os01g0718900:Os01g0718900 | 32 | 2.6 | 5 | AK110196:Os05g0516400 | 31 | 5.9 | 6 | AK065222:Os09g0516300 | 30 | 7.6 | 7 | AK119846: | 30 | 7.7 | 8 | AK108974: | 30 | 7.7 | 9 | AK120897:Os04g0624900 | 30 | 7.7 | 10 | AK119324:Os03g0103400 | 30 | 7.7 | 11 | AK106805:Os05g0173800 | 30 | 7.7 | 12 | AK101641:Os10g0485000 | 30 | 7.7 | 13 | AK072354:Os09g0498200 | 30 | 7.7 | 14 | AK064171:Os01g0956700 | 30 | 7.7 | 15 | AK120193:Os06g0234100 | 30 | 10.0 | 16 | AK110714:Os03g0431500 | 30 | 10.0 | 17 | AK119920:Os01g0355500 | 30 | 10.0 | 18 | AK100317:Os01g0355500 | 30 | 10.0 | 19 | AK100217:Os05g0226900 | 30 | 10.0 | 20 | AK069326:Os04g0653000 | 30 | 10.0 | 21 | AK059441:Os04g0653000 | 30 | 10.0 | 22 | AF337054:Os05g0226900 | 30 | 10.0 |
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>AK109063: | Length = 334 Score = 36.6 bits (83), Expect = 0.11 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Frame = +2 Query: 2273 PRPAPQTAREPQPRPTPSQVPAWRIWSWGLL*GGHGAAD--------SRAP*AEATPCNQ 2428 P P P A P P P PS +P +R + G + + D +R P + P Sbjct: 118 PTPLPAPAPGPSPAPAPSPLPQYRDTQYDS--GFYNSFDPSYSPFSYNRGPFPSSYPSFG 175 Query: 2429 SQVLRTSRTKRDVPLPDQTWGGCSAQGCPCCSLHPSTPGYGVSSGPALPTYPRPRL 2596 S P ++G PS P YG S GP+ P+Y P L Sbjct: 176 SSY----------PSFGPSYGSSYGSSYGSSYAAPSFPSYGPSYGPSFPSYAAPAL 221
>AK067471:Os01g0203000 | Length = 365 Score = 33.5 bits (75), Expect = 0.90 Identities = 31/103 (30%), Positives = 39/103 (37%) Frame = +2 Query: 2492 GCSAQGCPCCSLHPSTPGYGVSSGPALPTYPRPRLAGGPVLARXXXXXXXXXXXTDSNCD 2671 GCS PC S PS P ++ P ++P A P L D N Sbjct: 109 GCSVSPSPCSSYQPS-PRASYNASPTSSSFPSG--ASSPFLPHPNNMANG----VDGNPI 161 Query: 2672 LIPLCFLCEVLHR*KSEGLPPGCINSSHINVPITA*VSSPAGR 2800 L L L K LPP I+ I+ P+T +SSP R Sbjct: 162 LPWLKTLSNSPSSKKHPQLPPLLIHGGSISAPVTPPLSSPTAR 204
>AK107926:Os01g0382000 | Length = 164 Score = 32.3 bits (72), Expect = 2.0 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = -3 Query: 2927 HCHKRGDRGQSSAWGSLGGSPSAWRWLALEVLQEWAGRQT-----LSTCRQG 2787 H R + G++ WGS GG W A +Q W G ++ ++C QG Sbjct: 70 HSSNRNNLGENLFWGSAGGD-----WTAASAVQSWVGEKSDYDYASNSCAQG 116
>Os01g0718900:Os01g0718900 | Length = 351 Score = 32.0 bits (71), Expect = 2.6 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 2255 EGHRVRPRPAPQTAREPQPRPTPSQ-VPAW 2341 +G PRPAP TA P PTP++ P W Sbjct: 70 QGFEFAPRPAPATATATAPAPTPARGTPEW 99
>AK110196:Os05g0516400 | Length = 827 Score = 30.8 bits (68), Expect = 5.9 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +2 Query: 2270 RPRPAPQTA-REPQPRPTPSQV-PAWRIWSWGLL*GGHGAADSRAP*AEATP 2419 R PAP A REP P P+PS P+ I++ GG GAA P + +P Sbjct: 231 RSPPAPSPASREPSPSPSPSVAPPSLPIFTPSPPGGGRGAATPSPPSSRPSP 282
>AK065222:Os09g0516300 | Length = 900 Score = 30.4 bits (67), Expect = 7.6 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +3 Query: 1713 PPNPVLAKASFVHASEELGPVVTSAAKNKGLFGSGKPAMFRESCPGLGNAPSE 1871 PP P +A+ AS L P SAA G+ GSG P + +GN P++ Sbjct: 7 PPQPQPQEAAGREASSSLSPAKESAAGGGGVGGSGAP---ETNTLWVGNLPAQ 56
>AK119846: | Length = 648 Score = 30.4 bits (67), Expect = 7.7 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Frame = -1 Query: 1963 NNGIQRQSHQRENQQGGRRLGSKNRWGAPFPSDGAFPNPGQLSRNMAGL-PDPNSPLFLA 1787 ++G+ +RE Q K + G+P P A P L+ N L P PN + + Sbjct: 141 SSGLLASPRERERQSSFGGFLGKQKSGSPAPGRSASPGGRMLNTNSMNLMPTPNKYVTDS 200 Query: 1786 ALVTTGPSSSEAWTKEALARTGFG 1715 V S+ + AL R+G G Sbjct: 201 GKVIDMASAYRRLSDAALLRSGGG 224
>AK108974: | Length = 335 Score = 30.4 bits (67), Expect = 7.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 Query: 2249 EREGHRVRPRPAPQTAREPQPRPTPSQVPA 2338 + + V P PAP A P P P P+ PA Sbjct: 221 QSQNQNVNPAPAPAPAPAPAPAPAPAPAPA 250
>AK120897:Os04g0624900 | Length = 138 Score = 30.4 bits (67), Expect = 7.7 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 2243 RLEREGHRVRPRPAPQTAREPQPRPTPSQVP 2335 RL R G P P+ R P PRP P + P Sbjct: 69 RLRRRGEVAPQHPRPRRRRAPHPRPPPPRPP 99
>AK119324:Os03g0103400 | Length = 474 Score = 30.4 bits (67), Expect = 7.7 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 565 RPALASPQGSDPETAPQPPLFSPGAHDSTTR-TSYLPFDNL 684 R AL S S + P PPL P HD + TSY F +L Sbjct: 154 RRALISDDDSSSSSTPPPPLHEPHPHDLLLKLTSYKSFSDL 194
>AK106805:Os05g0173800 | Length = 204 Score = 30.4 bits (67), Expect = 7.7 Identities = 16/45 (35%), Positives = 19/45 (42%) Frame = +1 Query: 2827 SCRTSRASHLHAEGEPPSEPQAEDCPLSPRLWQWGLWGRGKEACA 2961 SC T+R+SH A PP P + W W GR A A Sbjct: 59 SCATTRSSHAAASSPPPRGRFTASGPTTTTWWTWPSPGRMGTAAA 103
>AK101641:Os10g0485000 | Length = 1078 Score = 30.4 bits (67), Expect = 7.7 Identities = 31/115 (26%), Positives = 37/115 (32%) Frame = +2 Query: 2273 PRPAPQTAREPQPRPTPSQVPAWRIWSWGLL*GGHGAADSRAP*AEATPCNQSQVLRTSR 2452 P A A P+ PS PA G DS A TP + S Sbjct: 4 PATAASDATNPEAAEVPSAAPASE---------SEGPFDSGVVAAATTPA-----VVDSA 49 Query: 2453 TKRDVPLPDQTWGGCSAQGCPCCSLHPSTPGYGVSSGPALPTYPRPRLAGGPVLA 2617 + D P G P P+ P + PA P PRP+ AG P A Sbjct: 50 VEGDAPAAPAPTSGSG----PAAPSMPANP-----ASPATPGPPRPQFAGSPAYA 95
>AK072354:Os09g0498200 | Length = 228 Score = 30.4 bits (67), Expect = 7.7 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +1 Query: 835 SCKQLGNGCCIV*PGSGNGFIAAAWK 912 +C LG+ IV SGNG +AAAW+ Sbjct: 43 TCNSLGHAAHIVVVSSGNGEVAAAWR 68
>AK064171:Os01g0956700 | Length = 331 Score = 30.4 bits (67), Expect = 7.7 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +1 Query: 2062 SADDVHSPLTSVPSIEQRKPQILEAGIQVLRQRRIVTV*SAFPIDLFTNYLCSLR 2226 S DD H P +P +EQ P +L+ + RQ + F + F +Y+ LR Sbjct: 226 SRDDFHWPFVKLPKLEQNLPPMLQQILSGERQMK-----RKFDVTFFCDYINLLR 275
>AK120193:Os06g0234100 | Length = 628 Score = 30.0 bits (66), Expect = 10.0 Identities = 25/77 (32%), Positives = 34/77 (44%) Frame = +3 Query: 1683 AASTDFSTHWPPNPVLAKASFVHASEELGPVVTSAAKNKGLFGSGKPAMFRESCPGLGNA 1862 AAS+D H P +P+ A S AS+ P + A + +G R+S G Sbjct: 68 AASSD-GHHHPSSPLAAAVS---ASDSPDPASSPAPRGRG----------RKSRRGRPEP 113 Query: 1863 PSEGNGAPHRFLEPRRR 1913 PS+ APH P RR Sbjct: 114 PSDAGAAPHAPPSPPRR 130
>AK110714:Os03g0431500 | Length = 118 Score = 30.0 bits (66), Expect = 10.0 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = +3 Query: 2289 RLPESLSPAPHRPRSLPGGSGAGDCCEVDTVQLIPGRPELKQHRATSRRCSGRAVP 2456 RLPE L+ + H P PG + + + P P + A RR R P Sbjct: 15 RLPEPLTASSHAPAGQPGAAASSERVPAGAAPPTPPPPRARPTLALPRRVRHRPAP 70
>AK119920:Os01g0355500 | Length = 523 Score = 30.0 bits (66), Expect = 10.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 562 ARPALASPQGSDPETAPQPPLFSPGAHDSTTRTSYLPFDNLP 687 A PA SP S P +P PP+F D + PFD +P Sbjct: 42 AEPAEPSPSSSAP--SPPPPVFDKPVFDDADADAADPFDAIP 81
>AK100317:Os01g0355500 | Length = 948 Score = 30.0 bits (66), Expect = 10.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +1 Query: 562 ARPALASPQGSDPETAPQPPLFSPGAHDSTTRTSYLPFDNLP 687 A PA SP S P +P PP+F D + PFD +P Sbjct: 42 AEPAEPSPSSSAP--SPPPPVFDKPVFDDADADAADPFDAIP 81
>AK100217:Os05g0226900 | Length = 360 Score = 30.0 bits (66), Expect = 10.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 2252 REGHRVRPRPAPQTAREPQPRPTPSQVP 2335 + G + P+P P+ EP+P P P VP Sbjct: 163 KPGPKPEPKPEPKPHPEPKPEPKPKPVP 190
>AK069326:Os04g0653000 | Length = 196 Score = 30.0 bits (66), Expect = 10.0 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -1 Query: 1954 IQRQSHQRENQQGGRRL-GSKNRWGAP--FPSDGAFPNPGQLS 1835 ++ +SHQ++ QQG L G G P FP PNP QL+ Sbjct: 13 VEEKSHQQQQQQGEEELVGLSLAGGRPKVFPMSSPPPNPSQLT 55
>AK059441:Os04g0653000 | Length = 194 Score = 30.0 bits (66), Expect = 10.0 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -1 Query: 1954 IQRQSHQRENQQGGRRL-GSKNRWGAP--FPSDGAFPNPGQLS 1835 ++ +SHQ++ QQG L G G P FP PNP QL+ Sbjct: 11 VEEKSHQQQQQQGEEELVGLSLAGGRPKVFPMSSPPPNPSQLT 53
>AF337054:Os05g0226900 | Length = 358 Score = 30.0 bits (66), Expect = 10.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 2252 REGHRVRPRPAPQTAREPQPRPTPSQVP 2335 + G + P+P P+ EP+P P P VP Sbjct: 161 KPGPKPEPKPEPKPHPEPKPEPKPKPVP 188 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 98,989,448 Number of extensions: 2655803 Number of successful extensions: 12675 Number of sequences better than 10.0: 22 Number of HSP's gapped: 12360 Number of HSP's successfully gapped: 22 Length of query: 1008 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 898 Effective length of database: 10,995,345 Effective search space: 9873819810 Effective search space used: 9873819810 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
