ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf72k23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9Z2Q1:SC31A_RAT Protein transport protein Sec31A - Rattus norve... 34 3.2
2Q99MZ3:WBS14_MOUSE Williams-Beuren syndrome chromosome region 14... 34 4.1
3Q8K285:FCHO1_MOUSE FCH domain only protein 1 - Mus musculus (Mouse) 34 4.2
4Q2M2I8:AAK1_HUMAN AP2-associated protein kinase 1 - Homo sapiens... 33 5.4
5Q9VSR3:ORB2_DROME Probable RNA-binding protein orb2 - Drosophila... 33 7.1
6P16166:UFO1_MAIZE Anthocyanidin 3-O-glucosyltransferase - Zea ma... 33 7.1
7Q9W6C5:PDC6I_XENLA Programmed cell death 6-interacting protein -... 33 9.3
8Q5SW96:ARH_HUMAN Low density lipoprotein receptor adapter protei... 33 9.3
9Q8LCE4:AGP5_ARATH Classical arabinogalactan protein 5 precursor ... 33 9.3

>Q9Z2Q1:SC31A_RAT Protein transport protein Sec31A - Rattus norvegicus (Rat)|
          Length = 1249
 Score = 34.3 bits (77), Expect = 3.2
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
 Frame = -1

Query: 2464 VPLGTARPEHLRLVARCCFSSGR--PGISCTVSTSQQSPAPDP-PGRDLGRCGAG----- 2309
            +P  T +P+ ++L  R C + GR  PG   + S+ +  P P   PG   G          
Sbjct: 770  LPDNTNQPDIVQLRDRLCRAQGRSVPGQESSRSSYEGQPLPKGGPGPLAGHPQVSRVQSQ 829

Query: 2308 -----LRLSGSLRRWPGPHPMALPLQPPDACLALENKGN 2207
                 +R++ ++  W    P ALP  PP AC +    GN
Sbjct: 830  QYYPQVRIAPTVTTWSDRTPTALPSHPPAACPSDTQGGN 868



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>Q99MZ3:WBS14_MOUSE Williams-Beuren syndrome chromosome region 14 protein homolog - Mus|
            musculus (Mouse)
          Length = 864

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = +3

Query: 1650 PQQMLIHGLHGAASTDFSTHWPPNPVLAKASFVHASEELGPVVTSAAKNKGLFGSGKPAM 1829
            P  + +HGL     + F T  PP  +L + S + A        TSA    G+     P  
Sbjct: 404  PTPVKVHGLEPCTPSPFPTMAPPPSLLPEESLLSARFPF----TSAPPAPGVSTLPAPTT 459

Query: 1830 FRES-CPGLGNAPSEGNGAPHRFLEP 1904
            F  +  PG G  P   +  PH +LEP
Sbjct: 460  FVPTPQPGPGPVPFSVDHLPHGYLEP 485



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>Q8K285:FCHO1_MOUSE FCH domain only protein 1 - Mus musculus (Mouse)|
          Length = 873

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 51/209 (24%), Positives = 77/209 (36%), Gaps = 13/209 (6%)
 Frame = +2

Query: 2273 PRPA-PQT-----AREPQPRPTPSQVPAWRIWSWGLL*GGHGAADSRAP*AEATPCNQSQ 2434
            PRP  PQ+     A+ P+PR    + P+   W      G  G ADS  P A+ T    + 
Sbjct: 491  PRPGTPQSPPTCRAQHPEPRGLMPRAPSPGPW------GPEGGADSLTP-ADPTREGLAA 543

Query: 2435 VLRTSRTKR-DVPLPDQTWGGC-----SAQGCPCCSLHPSTPGYGVSSGPALPTYPRPRL 2596
             LR  R+++   PL       C     S  G    ++ P  P +    G  +   P P +
Sbjct: 544  TLRRPRSRKVSCPLTRSNGDLCRSLSPSPLGSSAPTIPPDRPSFSTQMGHGISRGPSPVV 603

Query: 2597 AGGPVLARXXXXXXXXXXXTDSNCDLIPLCF-LCEVLHR*KSEGLPPGCINSSHINVPIT 2773
             G                      D +P+     E +H     G  P C+  + +   +T
Sbjct: 604  LGSQ--------------------DTLPVATAFTEYVHA-YFRGHSPSCL--ARVTGELT 640

Query: 2774 A*VSSPAGRC*EFGGQPTPAELPERAIST 2860
              ++ PAG    F G P P  L  R ++T
Sbjct: 641  --MTFPAGIVRVFSGTPPPPVLSFRLVNT 667



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>Q2M2I8:AAK1_HUMAN AP2-associated protein kinase 1 - Homo sapiens (Human)|
          Length = 863

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
 Frame = +2

Query: 2276 RPAPQT-AREPQPRPTPSQVPAWRIWSWGLL*GGHGAADSRAP*AEATPCNQSQVLRTSR 2452
            +P PQT A++PQ  PTP Q P+ +             A      A+ATP +Q Q+    +
Sbjct: 426  QPLPQTQAKQPQAPPTPQQTPSTQ-------------AQGLPAQAQATPQHQQQLFLKQQ 472

Query: 2453 TKRDVPLPDQT------WGGCSAQGCPCCSLHPSTPGYGVSSGPAL 2572
             ++  P P Q       +    AQ     ++HP+T    ++  P +
Sbjct: 473  QQQQQPPPAQQQPAGTFYQQQQAQTQQFQAVHPATQKPAIAQFPVV 518



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>Q9VSR3:ORB2_DROME Probable RNA-binding protein orb2 - Drosophila melanogaster (Fruit|
           fly)
          Length = 704

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +3

Query: 144 QHQEATSQH-GHEGKQNTHGKKRDQAPTAKSPFMLHARKRPRREL*GHDQITVPAGHQGA 320
           QHQ+   QH  H+ +Q  H  ++  +P   +    H +++  RE  G    + P G  G 
Sbjct: 181 QHQQQHQQHQQHQQQQQLHQHQQQLSPNLSALHHHHQQQQQLRESGGSHSPSSPGG-GGG 239

Query: 321 TTPRNPEDGGQELGSVEP 374
            +P N    G   G + P
Sbjct: 240 GSPYNGSQAGCSSGGISP 257



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>P16166:UFO1_MAIZE Anthocyanidin 3-O-glucosyltransferase - Zea mays (Maize)|
          Length = 471

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 31/109 (28%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
 Frame = -1

Query: 1906 LGSKNRWGAPFPSDG--AFPNPGQLSRNMAGLPDPNSPLFLAALVTTGPSSSEAWTKEAL 1733
            LG +   G  + S G  A P P +L    AGL D  +P   +    + P     +   A 
Sbjct: 282  LGRQPARGVAYVSFGTVACPRPDELRELAAGLEDSGAPFLWSLREDSWPHLPPGFLDRA- 340

Query: 1732 ARTGFGGQWVEKSVLAAPWSPWINIC*GPQCG-----KSWSHFLPGLLS 1601
            A TG G        L  PW+P + +   P  G       W+  L GL S
Sbjct: 341  AGTGSG--------LVVPWAPQVAVLRHPSVGAFVTHAGWASVLEGLSS 381



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>Q9W6C5:PDC6I_XENLA Programmed cell death 6-interacting protein - Xenopus laevis (African|
            clawed frog)
          Length = 867

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
 Frame = +2

Query: 2273 PRPAPQT---AREPQPRPTPSQVPAWRIWSWGLL*GGHGAADSRAP*AEATPCNQSQVLR 2443
            P PAP+T   A++P PRP P  +P+                      A   P + +Q   
Sbjct: 744  PTPAPRTVFSAKQPPPRPPPPAMPS----------------------ASPVPASAAQASN 781

Query: 2444 TSRT-KRDVPLPDQTWGGCSAQGCPCCSLHPSTPGYGVSSGPALPTYPRPRLAG 2602
             + T   D   P        AQG P    +PS PGY    G  +P    P + G
Sbjct: 782  PAPTAAADSSQPPSNTIPSQAQGPP----YPSYPGYPGYYGMPMPVGYNPYMYG 831



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>Q5SW96:ARH_HUMAN Low density lipoprotein receptor adapter protein 1 - Homo sapiens|
           (Human)
          Length = 308

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +2

Query: 254 KKASEGAVRT*SNHCASWSPGGHHSKEP*RWWTGIRKC*TVLDGMLF 394
           K A    +R+ S    SW  GG H K P   WT  R+  T+L+GMLF
Sbjct: 5   KSAGRALIRSPSLAKQSWGGGGRHRKLP-ENWTDTRE--TLLEGMLF 48



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>Q8LCE4:AGP5_ARATH Classical arabinogalactan protein 5 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 133

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +1

Query: 547 RRRSQARPALASPQGSDPETAP---QPPLFSPGAHDSTTRTSYLPFDNLPFSDRAP 705
           R  + A    A+P  S P TAP   QPP  SP A  ++T  S  P  N+P  +  P
Sbjct: 44  RATAPAPSPSANPPPSAPTTAPPVSQPPTESPPAPPTSTSPSGAPGTNVPSGEAGP 99


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 570,906,763
Number of extensions: 13891233
Number of successful extensions: 46714
Number of sequences better than 10.0: 9
Number of HSP's gapped: 46086
Number of HSP's successfully gapped: 9
Length of query: 1008
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 885
Effective length of database: 66,948,154
Effective search space: 59249116290
Effective search space used: 59249116290
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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