>Q76C99:RF1_ORYSA Rf1 protein, mitochondrial precursor - Oryza sativa (Rice)|
          Length = 791
 Score =  202 bits (515), Expect = 4e-51
 Identities = 127/451 (28%), Positives = 222/451 (49%), Gaps = 14/451 (3%)
 Frame = +3

Query: 735  CNNGKLIQACC----------VIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKE-VLE 881
            C  G LI  CC           +  ++  G   DA     L++GL    + + A + VL 
Sbjct: 88   CTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR 147

Query: 882  VMVLSGGIPDTITCNMLIAQLCCTGQLNLAMNVLE---DMRYGGISPNGITFNTLIRCMC 1052
             M   G IP+  + N+L+  LC   +   A+ +L    D R GG  P+ +++ T+I    
Sbjct: 148  RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 1053 NQHMYGRAITFWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVV 1232
             +    +A + + E L  G  P V+T   ++  +CK     +AMEVLN +   G  PD +
Sbjct: 208  KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 1233 TYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHM 1412
            TYN+++   C +G+ K+A   L ++ ++G+EP+  TY +L+  LC   R  E   +   M
Sbjct: 268  TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 1413 NHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMV 1592
                 +P++T Y   +  +   G L +  G+L+ MV +   PD   ++ L+ A  K+G V
Sbjct: 328  TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 1593 EEALLVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSL 1772
            ++A+LV   +R+ G     +TY  +I  L   G V+ AM  F++MI +G+SP +I Y SL
Sbjct: 388  DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 1773 VMCFCRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETK 1952
            +   C  N  E A +L+   L  G  +    F  +I + C++G+   +  +  +M+    
Sbjct: 448  IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 1953 NTSNSFYLSIVRRVAKSGRIEEAERLLQELV 2045
              +   Y +++     +G+++EA +LL  +V
Sbjct: 508  KPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538



 Score =  187 bits (474), Expect = 2e-46
 Identities = 130/516 (25%), Positives = 223/516 (43%), Gaps = 70/516 (13%)
 Frame = +3

Query: 711  YTGNLRRYCNNGKLIQACCVIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMV 890
            YT  +  +   G   +A     EM+  G +PD      +I  L K    +KA EVL  MV
Sbjct: 199  YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 891  LSGGIPDTITCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYG 1070
             +G +PD +T N ++   C +GQ   A+  L+ MR  G+ P+ +T++ L+  +C      
Sbjct: 259  KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 1071 RAITFWKEQLRIGWPPYVMTSTLLVD--------------------------------LV 1154
             A   +    + G  P + T   L+                                 L+
Sbjct: 319  EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 1155 C---KKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLE 1325
            C   K+    +AM V +++  +G  P+ VTY A+I   CK+GR++DA     ++I EGL 
Sbjct: 379  CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 1326 PNSTTYCILLHSLCNTRRWAEVYDLLTHM-----------------NH------------ 1418
            P +  Y  L+H LC   +W    +L+  M                 +H            
Sbjct: 439  PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 1419 ------VNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICK 1580
                  +  +P+V  YN  IN +C  G +D+A+ +L  MVS    P+ VTY+TL+N  CK
Sbjct: 499  FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 1581 EGMVEEALLVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDIT 1760
               +E+AL++ + +  +G     ITYN ++  L        A  L+  +   G   +  T
Sbjct: 559  ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 1761 YGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVML 1940
            Y  ++   C+  + ++ALQ+      +  +++  TF ++I AL + G+ + A D+     
Sbjct: 619  YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 1941 SETKNTSNSFYLSIVRRVAKSGRIEEAERLLQELVD 2048
            S     +   Y  +   +   G +EE ++L   + D
Sbjct: 679  SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714



 Score =  182 bits (463), Expect = 4e-45
 Identities = 107/419 (25%), Positives = 202/419 (48%)
 Frame = +3

Query: 792  GQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMVLSGGIPDTITCNMLIAQLCCTGQLNLA 971
            G  PD      +I G  K G ++KA      M+  G +PD +T N +IA LC    ++ A
Sbjct: 191  GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 972  MNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAITFWKEQLRIGWPPYVMTSTLLVDL 1151
            M VL  M   G+ P+ +T+N+++   C+      AI F K+    G  P V+T +LL+D 
Sbjct: 251  MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 1152 VCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPN 1331
            +CK      A ++ + +   G +P++ TY  L+      G L +   +L  ++  G+ P+
Sbjct: 311  LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370

Query: 1332 STTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLE 1511
               + IL+ +     +  +   + + M      P+   Y   I   CK G ++ A+   E
Sbjct: 371  HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430

Query: 1512 KMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALANKG 1691
            +M+ +   P  + YN+L++ +C     E A  +   + + G  L  I +N++ID+   +G
Sbjct: 431  QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490

Query: 1692 EVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATFV 1871
             V ++  LF+ M+  G+ P+ ITY +L+  +C     +EA++LL+  +++G +    T+ 
Sbjct: 491  RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550

Query: 1872 MVIQALCRDGKAEAAADILRVMLSETKNTSNSFYLSIVRRVAKSGRIEEAERLLQELVD 2048
             +I   C+  + E A  + + M S   +     Y  I++ + ++ R   A+ L   + +
Sbjct: 551  TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609



 Score =  161 bits (408), Expect = 1e-38
 Identities = 117/439 (26%), Positives = 201/439 (45%)
 Frame = +3

Query: 723  LRRYCNNGKLIQACCVIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMVLSGG 902
            L+ Y   G L++   ++D MV +G  PD      LI    K GK ++A  V   M   G 
Sbjct: 343  LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402

Query: 903  IPDTITCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAIT 1082
             P+ +T   +I  LC +G++  AM   E M   G+SP  I +N+LI  +C  + + RA  
Sbjct: 403  NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462

Query: 1083 FWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASC 1262
               E L  G     +    ++D  CK+     + ++   +   G +P+V+TYN LI+  C
Sbjct: 463  LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522

Query: 1263 KAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVT 1442
             AG++ +A  +L+ +++ GL+PN+ TY  L++  C   R  +   L   M      PD+ 
Sbjct: 523  LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582

Query: 1443 AYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCI 1622
             YNI +    +      A  +  ++       ++ TYN +L+ +CK  + ++AL + + +
Sbjct: 583  TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642

Query: 1623 RENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMA 1802
                 +L   T+N +IDAL   G   +A  LF    S+G+ P+  TY  +      + + 
Sbjct: 643  CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702

Query: 1803 EEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETKNTSNSFYLSI 1982
            EE  QL       G  V       +++ L + G+   A   L  M+ E   +  +   S+
Sbjct: 703  EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS-MIDEKHFSLEASTASL 761

Query: 1983 VRRVAKSGRIEEAERLLQE 2039
               +   G+ +E  R L E
Sbjct: 762  FIDLLSGGKYQEYYRFLPE 780



 Score =  139 bits (349), Expect = 7e-32
 Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 7/299 (2%)
 Frame = +3

Query: 1170 PKRAMEVLNELAMEGCQ---PDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTT 1340
            P  A+   N +A  G     PD+ TY  LI   C+AGRL      L  +I +G   ++  
Sbjct: 65   PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124

Query: 1341 YCILLHSLCNTRRWAEVYDL-LTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKM 1517
            +  LL  LC  +R ++  D+ L  M  + C P+V +YNI +   C      +A+ +L  M
Sbjct: 125  FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184

Query: 1518 VSDK---CFPDIVTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALANK 1688
              D+     PD+V+Y T++N   KEG  ++A      + + G     +TYN++I AL   
Sbjct: 185  ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244

Query: 1689 GEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATF 1868
              + KAM + + M+ +G+ PD +TY S++  +C     +EA+  L +  + G +  V T+
Sbjct: 245  QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 1869 VMVIQALCRDGKAEAAADILRVMLSETKNTSNSFYLSIVRRVAKSGRIEEAERLLQELV 2045
             +++  LC++G+   A  I   M         + Y ++++  A  G + E   LL  +V
Sbjct: 305  SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363



 Score =  108 bits (270), Expect = 1e-22
 Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 3/377 (0%)
 Frame = +3

Query: 603  SGDVERAILSLQAKPWKHLGQNSNEGVDLPKDKGMLYTGNLRRYCNNGKLIQACCVIDEM 782
            SG VE A+L  +        Q  +EG+       ++Y   +   C   K  +A  +I EM
Sbjct: 419  SGRVEDAMLYFE--------QMIDEGLS---PGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 783  VLHGQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMVLSGGIPDTITCNMLIAQLCCTGQL 962
            +  G   +      +I    K G+  +++++ E+MV  G  P+ IT N LI   C  G++
Sbjct: 468  LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 963  NLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAITFWKEQLRIGWPPYVMTSTLL 1142
            + AM +L  M   G+ PN +T++TLI   C       A+  +K                 
Sbjct: 528  DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK----------------- 570

Query: 1143 VDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGL 1322
                              E+   G  PD++TYN ++    +  R   AK +  R+   G 
Sbjct: 571  ------------------EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 1323 EPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIG 1502
            +   +TY I+LH LC  +   +   +  ++  ++ + +   +NI I+   K G  D+A  
Sbjct: 613  QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672

Query: 1503 VLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALA 1682
            +     S+   P+  TY  +   I  +G++EE   +   + +NG  +     N ++  L 
Sbjct: 673  LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732

Query: 1683 NKGEVKKA---MALFDE 1724
             +GE+ +A   +++ DE
Sbjct: 733  QRGEITRAGTYLSMIDE 749



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
 Frame = +3

Query: 1731 SDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAE 1910
            +D ++PD  TYG L+ C CR    +     L   +  GF+V    F  +++ LC D +  
Sbjct: 80   ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139

Query: 1911 AAADILRVMLSETKNTSNSF-YLSIVRRVAKSGRIEEAERLLQELVD 2048
             A DI+   ++E     N F Y  +++ +    R +EA  LL  + D
Sbjct: 140  DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMAD 186

>P0C043:Y4791_ARATH Putative PPR-repeat protein At4g17915 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 463

 Score =  131 bits (329), Expect = 2e-29
 Identities = 116/438 (26%), Positives = 193/438 (44%), Gaps = 2/438 (0%)
 Frame = +3

Query: 735  CNNGKLIQACCVIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMVLSGGIPDT 914
            C   KL +A  +I + +  G  PD      LI G  +     +A  V   M  +G  PD 
Sbjct: 24   CKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDV 83

Query: 915  ITCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAITFWKE 1094
             T N LIA       L+  + + ++M   GI P+  ++NTL+ C      +  A     +
Sbjct: 84   ATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYK 143

Query: 1095 QLRI-GWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAG 1271
             L++ G  P   T  +L+D +CK      A+E+  E+     +P+++TYN LI+  CK+ 
Sbjct: 144  DLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSR 202

Query: 1272 RLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYN 1451
            R+  AK +LT L   G  PN+ TY  +L     TRR      L   M       D  AY 
Sbjct: 203  RVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYF 262

Query: 1452 IFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIREN 1631
              ++   K G   +A   ++++V      DIV+YNTLLN   K+G ++    +   I   
Sbjct: 263  AVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERR 322

Query: 1632 GWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEA 1811
            G +    T+  +++ L   G+ ++A   F  M   GI  + +T   LV   C+    + A
Sbjct: 323  GMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRA 382

Query: 1812 LQLLNRTLALGFQVK-VATFVMVIQALCRDGKAEAAADILRVMLSETKNTSNSFYLSIVR 1988
            ++          +VK   T+  V+  LC+D +   A+ +L    ++      S   +++ 
Sbjct: 383  MRYFE-----SMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPTSARRAVLS 437

Query: 1989 RVAKSGRIEEAERLLQEL 2042
             +  SG   EA +   E+
Sbjct: 438  GLRMSGCYGEARKAKAEM 455



 Score =  119 bits (299), Expect = 5e-26
 Identities = 74/333 (22%), Positives = 154/333 (46%), Gaps = 1/333 (0%)
 Frame = +3

Query: 1029 NTLIRCMCNQHMYGRAITFWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAM 1208
            N  +  +C      +A +   + +R+G  P V+T   L+   C+  G + A  V   +  
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76

Query: 1209 EGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAE 1388
             G +PDV TYN+LI+ + +   L     +   ++  G+ P+  +Y  L+       +  E
Sbjct: 77   AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136

Query: 1389 VYDLL-THMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLL 1565
             + +L   +      P    YN+ ++  CK G++D A+ + ++M S +  P+++TYN L+
Sbjct: 137  AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS-RFKPELMTYNILI 195

Query: 1566 NAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGIS 1745
            N +CK   V  A  +   ++++G+    +TY T++        +++ + LF EM  +G +
Sbjct: 196  NGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYT 255

Query: 1746 PDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADI 1925
             D   Y ++V    +    +EA + +   +  G +  + ++  ++    +DG  +A  D+
Sbjct: 256  YDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDL 315

Query: 1926 LRVMLSETKNTSNSFYLSIVRRVAKSGRIEEAE 2024
            L  +           +  IV  + ++G+   AE
Sbjct: 316  LGEIERRGMKADEYTHTIIVNGLLRTGQTRRAE 348



 Score =  112 bits (279), Expect = 1e-23
 Identities = 89/375 (23%), Positives = 159/375 (42%), Gaps = 2/375 (0%)
 Frame = +3

Query: 924  NMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAITFWKEQLR 1103
            N+ +  LC   +L  A +++ D    G+ P+ +T+NTLI   C       A    +    
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76

Query: 1104 IGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAGRLKD 1283
             G  P V T   L+    ++      + + +E+   G  PD+ +YN L+    K G+ ++
Sbjct: 77   AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136

Query: 1284 AKTILTR-LIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYNIFI 1460
            A  +L + L   GL P   TY +LL +LC         +L   M     +P++  YNI I
Sbjct: 137  AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS-RFKPELMTYNILI 195

Query: 1461 NYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRENGWQ 1640
            N  CK   +  A  +L ++      P+ VTY T+L    K   +   L +   ++  G+ 
Sbjct: 196  NGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYT 255

Query: 1641 LVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQL 1820
                 Y  ++ AL   G  K+A     E++  G   D ++Y +L+  + +    +    L
Sbjct: 256  YDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDL 315

Query: 1821 LNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETKNTSNSFYLS-IVRRVA 1997
            L      G +    T  +++  L R G+   A +   V + E     N    + +V  + 
Sbjct: 316  LGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHF-VSMGEMGIGLNLVTCNCLVDGLC 374

Query: 1998 KSGRIEEAERLLQEL 2042
            K+G ++ A R  + +
Sbjct: 375  KAGHVDRAMRYFESM 389



 Score =  106 bits (265), Expect = 4e-22
 Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 1/270 (0%)
 Frame = +3

Query: 1239 NALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNH 1418
            N  + + CK  +L+ A++++   I  G++P+  TY  L+   C      E Y +   M  
Sbjct: 17   NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76

Query: 1419 VNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEE 1598
                PDV  YN  I    +   LD  + + ++M+    +PD+ +YNTL+    K G  EE
Sbjct: 77   AGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEE 136

Query: 1599 ALLVA-RCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLV 1775
            A  V  + ++  G      TYN L+DAL   G +  A+ LF EM S    P+ +TY  L+
Sbjct: 137  AFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQS-RFKPELMTYNILI 195

Query: 1776 MCFCRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETKN 1955
               C+      A  +L      G+     T+  +++   +  +      +   M  E   
Sbjct: 196  NGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYT 255

Query: 1956 TSNSFYLSIVRRVAKSGRIEEAERLLQELV 2045
                 Y ++V  + K+GR +EA   +QELV
Sbjct: 256  YDGYAYFAVVSALIKTGRTKEAYEYMQELV 285



 Score = 56.2 bits (134), Expect = 6e-07
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 1/215 (0%)
 Frame = +3

Query: 711  YTGNLRRYCNNGKLIQACCVIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKEVLEVMV 890
            YT  L+ Y    ++ +   +  EM   G   D      ++  L+KTG+  +A E ++ +V
Sbjct: 226  YTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELV 285

Query: 891  LSGGIPDTITCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYG 1070
              G   D ++ N L+      G L+   ++L ++   G+  +  T   ++  +       
Sbjct: 286  RKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTR 345

Query: 1071 RAITFWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALI 1250
            RA   +     +G    ++T   LVD +CK     RAM     + ++    D  TY +++
Sbjct: 346  RAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVK----DEYTYTSVV 401

Query: 1251 SASCKAGRLKDAKTILTRLIAEGLE-PNSTTYCIL 1352
               CK  R   A  +L     +G++ P S    +L
Sbjct: 402  HNLCKDMRFVCASKLLLSCYNKGIKIPTSARRAVL 436



 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 1/238 (0%)
 Frame = +3

Query: 693  KDKGMLYTGNLRRYCNNGKLIQACCVIDEMVLHGQIPDAKCCVRLIRGLVKTGKANKAKE 872
            K + M Y   +   C + ++  A  ++ E+   G  P+A     +++   KT +  +  +
Sbjct: 185  KPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQ 244

Query: 873  VLEVMVLSGGIPDTITCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMC 1052
            +   M   G   D      +++ L  TG+   A   ++++   G   + +++NTL+    
Sbjct: 245  LFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYF 304

Query: 1053 NQHMYGRAITFWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVV 1232
                         E  R G      T T++V+ + +    +RA E    +   G   ++V
Sbjct: 305  KDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLV 364

Query: 1233 TYNALISASCKAGRLKDAKTILTRLIAEGLE-PNSTTYCILLHSLCNTRRWAEVYDLL 1403
            T N L+   CKAG +  A         E +E  +  TY  ++H+LC   R+     LL
Sbjct: 365  TCNCLVDGLCKAGHVDRAMRYF-----ESMEVKDEYTYTSVVHNLCKDMRFVCASKLL 417

>P42704:LPPRC_HUMAN 130 kDa leucine-rich protein - Homo sapiens (Human)|
          Length = 1273

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 47/223 (21%), Positives = 89/223 (39%)
 Frame = +3

Query: 1434 DVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVA 1613
            DV+ YN  +  + +  +       L KM      P+ VTY  L+ + C  G +E A  + 
Sbjct: 40   DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKIL 99

Query: 1614 RCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRK 1793
              ++     +    ++ L+   A  G+++ A  +   M   GI P   TY +L+  +  K
Sbjct: 100  GFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 159

Query: 1794 NMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETKNTSNSFY 1973
               +   Q L +       +     + +I +  + G    +    +    E +   ++  
Sbjct: 160  GDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMN 219

Query: 1974 LSIVRRVAKSGRIEEAERLLQELVDCKVVKEDSPVILSS*LLE 2102
            L ++    K   +E+    LQ L+ C V KED P +  S  L+
Sbjct: 220  LILLLVTEK---LEDV--ALQILLACPVSKEDGPSVFGSFFLQ 257



 Score = 43.9 bits (102), Expect = 0.003
 Identities = 27/111 (24%), Positives = 46/111 (41%)
 Frame = +3

Query: 1185 EVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSL 1364
            + L ++     QP+ VTY  LI++ C  G ++ A  IL  +  + L      +  L+   
Sbjct: 62   DFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGH 121

Query: 1365 CNTRRWAEVYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKM 1517
                      ++LT M     EP    Y   +N + + G +D     LEK+
Sbjct: 122  ARAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172



 Score = 42.0 bits (97), Expect = 0.012
 Identities = 69/382 (18%), Positives = 138/382 (36%), Gaps = 8/382 (2%)
 Frame = +3

Query: 918  TCNMLIAQLCCTGQLNLAMNVLEDMRYGGISPNGITFNTLIRCMCNQHMYGRAITFWKEQ 1097
            +C  L+ +L    +   A  + + ++  G   +   +N L++             F  + 
Sbjct: 8    SCGSLLPELKLEERTEFAHRIWDTLQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKM 67

Query: 1098 LRIGWPPYVMTSTLLVDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAGRL 1277
                  P  +T   L+   C     + A ++L  +  +        ++AL++   +AG +
Sbjct: 68   EEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDM 127

Query: 1278 KDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYNIF 1457
            ++A+ ILT +   G+EP   TY  LL++         V   L  +               
Sbjct: 128  ENAENILTVMRDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQI 187

Query: 1458 INYFCKYGHLDQAIGVLEKMVSDKCF-PDIVTYNTLLNAICKEGMVEEALLVARCIRENG 1634
            I  F K G+L  +    +K   ++ + PD +    LL     E +  + LL     +E+G
Sbjct: 188  IFSFSKAGYLSMSQKFWKKFTCERRYIPDAMNLILLLVTEKLEDVALQILLACPVSKEDG 247

Query: 1635 WQLVR-------ITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRK 1793
              +         +T NT ++ L +  +  K + +          P   T    + C    
Sbjct: 248  PSVFGSFFLQHCVTMNTPVEKLTDYCKKLKEVQMHS-------FPLQFT----LHCALLA 296

Query: 1794 NMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEAAADILRVMLSETKNTSNSFY 1973
            N  + A  L+      GF ++   F  ++    ++   +   +IL+ M     +     Y
Sbjct: 297  NKTDLAKALMKAVKEEGFPIRPHYFWPLLVGRRKEKNVQGIIEILKGMQELGVHPDQETY 356

Query: 1974 LSIVRRVAKSGRIEEAERLLQE 2039
               V  +     +  A  +LQE
Sbjct: 357  TDYV--IPCFDSVNSARAILQE 376



 Score = 33.9 bits (76), Expect = 3.3
 Identities = 49/283 (17%), Positives = 109/283 (38%), Gaps = 14/283 (4%)
 Frame = +3

Query: 1278 KDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVYDLLTHMNHVNCEPDVTAYNIF 1457
            +D K  L    A   EP+     ++    C   +    YD+  +    N   +   Y+  
Sbjct: 896  EDEKHSLNSSSASTTEPDFQKDILIA---CRLNQKKGAYDIFLNAKEQNIVFNAETYSNL 952

Query: 1458 INYFCKYGHLDQAIGV---LEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRE 1628
            I       +  QA+ V    E  +      D      ++  + ++  ++EA+   + + +
Sbjct: 953  IKLLMSEDYFTQAMEVKAFAETHIKGFTLNDAANSRLIITQVRRD-YLKEAVTTLKTVLD 1011

Query: 1629 NGWQLVRITYNTLIDALANKGEVKKAMALFDEM--ISDGISPDDITY-GSLVMCFCRKNM 1799
                  R+    +I ALA KG+V+    +   +  + D I    + +  ++ +   + N 
Sbjct: 1012 QQQTPSRLAVTRVIQALAMKGDVENIEVVQKMLNGLEDSIGLSKMVFINNIALAQIKNNN 1071

Query: 1800 AEEALQLLNRTLALGFQVKVATFVMVIQALCR--DGKAEAAADILRVMLSETKN------ 1955
             + A++ +   L    +V    +  +     +  + + E A + + +M     N      
Sbjct: 1072 IDAAIENIENMLTSENKVIEPQYFGLAYLFRKVIEEQLEPAVEKISIMAERLANQFAIYK 1131

Query: 1956 TSNSFYLSIVRRVAKSGRIEEAERLLQELVDCKVVKEDSPVIL 2084
                F+L +V     +G++++A  LLQ    C  + E +P++L
Sbjct: 1132 PVTDFFLQLV----DAGKVDDARALLQR---CGAIAEQTPILL 1167

>Q10451:YLE1_SCHPO Uncharacterized protein C1093.01 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 1261

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
 Frame = +3

Query: 1179 AMEVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLH 1358
            A+ +  E      +P V  YNA++S   +A R  +   +   +   GL P S TY  +++
Sbjct: 910  ALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVIN 969

Query: 1359 SLCNTRRWAEVYDLLTHM-NHVNCEPDVTAYNIFINYFCK-YGHLDQAIGVLEKMVSDKC 1532
            + C     +    L   M N  N +P V  YN  I +  +   + ++A+    ++ +   
Sbjct: 970  AACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFNREKALFYYNRLCATDI 1029

Query: 1533 FPDIVTYNTLLNA 1571
             P   TY  L++A
Sbjct: 1030 EPSSHTYKLLMDA 1042



 Score = 42.0 bits (97), Expect = 0.012
 Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 17/234 (7%)
 Frame = +3

Query: 1236 YNALISASCKAGRL-------KDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRRWAEVY 1394
            Y  LIS   K  R        + +K +  ++  + LE  +    ++L ++  +  +A  +
Sbjct: 810  YPTLISVLSKNKRFDAVQRVFEHSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQF 869

Query: 1395 D----LLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQA---IGVLEKMVSDKCFPDIVTY 1553
                    +M  +   P  + +   IN   + G  D A   + + E+       P +  Y
Sbjct: 870  KSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLY 929

Query: 1554 NTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMIS 1733
            N +L+ + +     E   + + ++E+G     +TY T+I+A    G+   A  LF EM +
Sbjct: 930  NAVLSKLGRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMEN 989

Query: 1734 D-GISPDDITYGSLVMCFCRKNM--AEEALQLLNRTLALGFQVKVATFVMVIQA 1886
                 P    Y +++  F  + M   E+AL   NR  A   +    T+ +++ A
Sbjct: 990  QPNYQPRVAPYNTMIQ-FEVQTMFNREKALFYYNRLCATDIEPSSHTYKLLMDA 1042

>Q8C2E4:PTCD1_MOUSE Pentatricopeptide repeat protein 1 - Mus musculus (Mouse)|
          Length = 695

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
 Frame = +3

Query: 1572 ICKEGMVEEAL--LVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGIS 1745
            + KEG + EAL     + ++E   Q +   Y  LI      G +KKA  LF++M    + 
Sbjct: 144  LIKEGKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLE 203

Query: 1746 PDDITYGSLV-MCF---CRKNMAEEALQLLNRTLALGFQVKVATF--VMVIQALCRD 1898
            P D TY +L  +C     + +  + AL+L  +  A  FQ+ + T+  ++ + A C D
Sbjct: 204  PSDATYTALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCAD 260



 Score = 41.2 bits (95), Expect = 0.021
 Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 4/212 (1%)
 Frame = +3

Query: 837  LVKTGKANKAKEVLEVMVLSGGIPDTITCN--MLIAQLCCTGQLNLAMNVLEDMRYGGIS 1010
            L+K GK  +A ++ E  +L       + CN  +LI      G L  A  +  DM+   + 
Sbjct: 144  LIKEGKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLE 203

Query: 1011 PNGITFNTLIRCMCNQHMYGRAITFWKEQLRIGWPPYVMTSTLLVDLVCKKCGPKRAMEV 1190
            P+  T+  L   +C       A + WK+                          + A+++
Sbjct: 204  PSDATYTALFN-VC-------AESPWKDSAL-----------------------QSALKL 232

Query: 1191 LNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCN 1370
              +L     Q ++ TY+AL+  + K   L+    +   +I  G      T+C LL     
Sbjct: 233  RQQLQARNFQLNLKTYHALLKVAAKCADLRLCLDVFKEIIQRGHAVTEETFCFLLVGCIQ 292

Query: 1371 TRR--WAEVYDLLTHMNHVNCEPDVTAYNIFI 1460
             ++  + +   +   M  +  +P    YN+ +
Sbjct: 293  DKKTGFRQAMQVWRQMLSLGIKPSRHGYNLLL 324



 Score = 35.0 bits (79), Expect = 1.5
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
 Frame = +3

Query: 825  LIRGLVKTGKANKAKEVLEVMVLSGGIPDTIT-CNMLIAQLCCTGQLNLAMNVLEDMRYG 1001
            LIR   K G    AK +L ++   G +P+  T CN+ I    C    +  M +L DM+  
Sbjct: 524  LIRKKSKLGDLEGAKALLPILAKKGIVPNLRTFCNLAIG---CHRPRD-GMQLLADMKKS 579

Query: 1002 GISPNGITFNTLIRCMCNQHMYGRAITFWKE 1094
             +SPN   ++TLI     +  Y   I+  K+
Sbjct: 580  QVSPNIHIYSTLINAALKKLDYTYLISILKD 610



 Score = 34.3 bits (77), Expect = 2.5
 Identities = 43/194 (22%), Positives = 71/194 (36%), Gaps = 2/194 (1%)
 Frame = +3

Query: 1200 LAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRR 1379
            L  E  QP    Y  LI    + G LK A  +   +    LEP+  TY  L  ++C    
Sbjct: 162  LKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSDATYTALF-NVCAESP 220

Query: 1380 WAEVYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNT 1559
            W                              K   L  A+ + +++ +     ++ TY+ 
Sbjct: 221  W------------------------------KDSALQSALKLRQQLQARNFQLNLKTYHA 250

Query: 1560 LLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALA--NKGEVKKAMALFDEMIS 1733
            LL    K   +   L V + I + G  +   T+  L+       K   ++AM ++ +M+S
Sbjct: 251  LLKVAAKCADLRLCLDVFKEIIQRGHAVTEETFCFLLVGCIQDKKTGFRQAMQVWRQMLS 310

Query: 1734 DGISPDDITYGSLV 1775
             GI P    Y  L+
Sbjct: 311  LGIKPSRHGYNLLL 324

>Q5R655:PTCD1_PONPY Pentatricopeptide repeat protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 698

 Score = 43.5 bits (101), Expect = 0.004
 Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
 Frame = +3

Query: 1572 ICKEGMVEEAL--LVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGIS 1745
            + KEG + EAL     + ++E   Q +   Y  LI      G +KKA +L+++M    + 
Sbjct: 144  LIKEGKLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLE 203

Query: 1746 PDDITYGSLV-MCF---CRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEA 1913
            P D TY +L  +C     + +  + AL+L  +  A  F++ + T+  +++   +      
Sbjct: 204  PSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRM 263

Query: 1914 AADILRVML 1940
              D+ + ++
Sbjct: 264  CLDVFKEII 272



 Score = 42.4 bits (98), Expect = 0.009
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
 Frame = +3

Query: 1200 LAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRR 1379
            L  E  QP    Y ALI    + G LK A ++  ++    LEP+  TY  L  ++C    
Sbjct: 162  LKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDATYTALF-NVCAESP 220

Query: 1380 WAE-----VYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI 1544
            W +        L   +   N E ++  Y+  +    K   L   + V ++++        
Sbjct: 221  WKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTE 280

Query: 1545 VTYNTLLNAIC--KEGMVEEALLVARCIRENGWQLVRITYNTLIDALANKG 1691
             T++ LL      K+     AL V R +   G Q  R +YN L+ A  + G
Sbjct: 281  ETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 331

>O75127:PTCD1_HUMAN Pentatricopeptide repeat protein 1 - Homo sapiens (Human)|
          Length = 700

 Score = 42.4 bits (98), Expect = 0.009
 Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
 Frame = +3

Query: 1572 ICKEGMVEEAL--LVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGIS 1745
            + KEG + EAL     + ++E   Q +   Y  LI      G +KKA  L+++M    + 
Sbjct: 146  LIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLE 205

Query: 1746 PDDITYGSLV-MCF---CRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALCRDGKAEA 1913
            P D TY +L  +C     + +  + AL+L  +  A  F++ + T+  +++   +      
Sbjct: 206  PSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRM 265

Query: 1914 AADILRVML 1940
              D+ + ++
Sbjct: 266  CLDVFKEII 274



 Score = 40.4 bits (93), Expect = 0.036
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
 Frame = +3

Query: 1200 LAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNTRR 1379
            L  E  QP    Y  LI    + G LK A  +  ++    LEP+  TY  L  ++C    
Sbjct: 164  LKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALF-NVCAESP 222

Query: 1380 WAE-----VYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI 1544
            W +        L   +   N E ++  Y+  +    K   L   + V ++++        
Sbjct: 223  WKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVVTE 282

Query: 1545 VTYNTLLNAIC--KEGMVEEALLVARCIRENGWQLVRITYNTLIDALANKG 1691
             T++ LL      K+     AL V R +   G Q  R +YN L+ A  + G
Sbjct: 283  ETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCG 333

>Q6FKT1:AEP3_CANGA ATPase expression protein 3 - Candida glabrata (Yeast) (Torulopsis|
            glabrata)
          Length = 623

 Score = 37.0 bits (84), Expect = 0.39
 Identities = 41/214 (19%), Positives = 86/214 (40%), Gaps = 23/214 (10%)
 Frame = +3

Query: 1185 EVLNELAMEGCQPDVVTYNALISASCKAGRLKDAKTILTRLI--AEGLEPNSTTYCILLH 1358
            E+  ++ +EGC+P+  TYN L+    K   ++  ++I   L+     ++ N         
Sbjct: 239  ELFAQMKVEGCKPNTTTYNILLLNLVKKVHMRKIRSIKNELLFYLRNMQKNGI------- 291

Query: 1359 SLCNTRRWAEVYDLLT-HMNH-------VNCEPDVTA---YNIFINYFCKYGHLDQAIGV 1505
              C+T  W   Y+ L   M+        ++C   +T+   Y++  N      H+      
Sbjct: 292  -FCDTVTWNTCYNFLNDEMSRDLYIEKLIDCGVPLTSELVYSVVRN--SSKAHISTKTKY 348

Query: 1506 LEKMVSD--KCFPDIVTYNTLLNAICKEGMVEEALLVAR--------CIRENGWQLVRIT 1655
            +  M  +  + F ++   N L++ +  +  VE A  V R         + +  + +   T
Sbjct: 349  ILDMFGEDGESFVNLKFVNLLISDLVLDHNVERAWSVLRYFELKQLKFVNQPKFLINSET 408

Query: 1656 YNTLIDALANKGEVKKAMALFDEMISDGISPDDI 1757
             NT +   A +G +      ++  + D + P+ I
Sbjct: 409  MNTFLRYFAEQGRIDLCFLTYNYFVKDLVGPNKI 442



 Score = 33.9 bits (76), Expect = 3.3
 Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 18/228 (7%)
 Frame = +3

Query: 1386 EVYDLLTHMNHVNCEP--DVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNT 1559
            ++  +L H +++N      V  YN  + ++ K         +  +M  + C P+  TYN 
Sbjct: 199  KILRVLIHPSNLNTIDLRSVQCYNDILYFYSKKYDFATCRELFAQMKVEGCKPNTTTYNI 258

Query: 1560 LLNAICKE-------GMVEEALLVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALF 1718
            LL  + K+        +  E L   R +++NG     +T+NT  + L    E+ + + + 
Sbjct: 259  LLLNLVKKVHMRKIRSIKNELLFYLRNMQKNGIFCDTVTWNTCYNFL--NDEMSRDLYI- 315

Query: 1719 DEMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKVATFV-MVIQALCR 1895
            +++I  G+        S+V    + +++ +   +L+     G       FV ++I  L  
Sbjct: 316  EKLIDCGVPLTSELVYSVVRNSSKAHISTKTKYILDMFGEDGESFVNLKFVNLLISDLVL 375

Query: 1896 DGKAEAAADILRVM-LSETKNTSNSFYL-------SIVRRVAKSGRIE 2015
            D   E A  +LR   L + K  +   +L       + +R  A+ GRI+
Sbjct: 376  DHNVERAWSVLRYFELKQLKFVNQPKFLINSETMNTFLRYFAEQGRID 423



 Score = 33.9 bits (76), Expect = 3.3
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 20/139 (14%)
 Frame = +3

Query: 1380 WAEVYDLLTHMNHVNCEPDVTAYNIFINYFCKYGHL-------DQAIGVLEKMVSDKCFP 1538
            +A   +L   M    C+P+ T YNI +    K  H+       ++ +  L  M  +  F 
Sbjct: 234  FATCRELFAQMKVEGCKPNTTTYNILLLNLVKKVHMRKIRSIKNELLFYLRNMQKNGIFC 293

Query: 1539 DIVTYNTLLNAICKE-------------GMVEEALLVARCIRENGWQLVRITYNTLIDAL 1679
            D VT+NT  N +  E             G+   + LV   +R +    +      ++D  
Sbjct: 294  DTVTWNTCYNFLNDEMSRDLYIEKLIDCGVPLTSELVYSVVRNSSKAHISTKTKYILDMF 353

Query: 1680 ANKGEVKKAMALFDEMISD 1736
               GE    +   + +ISD
Sbjct: 354  GEDGESFVNLKFVNLLISD 372

>Q7Z401:MYCPP_HUMAN C-myc promoter-binding protein - Homo sapiens (Human)|
          Length = 1863

 Score = 36.2 bits (82), Expect = 0.67
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
 Frame = +3

Query: 810  KCCVRLIRGLVKTGKANKAKEVLEVMVLSGGIPDTITCNMLIAQLCCTGQLN---LAMNV 980
            K C   +R L        A +VL+ M      P    C  ++ QLC  GQ +   LA+ V
Sbjct: 781  KVCHSKVRAL------KTAYDVLKKMQSKKMDPPDEVCYRILMQLC--GQYDQPVLAVRV 832

Query: 981  LEDMRYGGISPNGITFNTLIRCMCNQHMYGRAI--TFWKEQLRIGWPPYVMTSTLLVDLV 1154
            L +M+  GI PN IT+            Y +A+  + W  + R G+  +     +++ + 
Sbjct: 833  LFEMQKAGIDPNAITYG----------YYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVT 882

Query: 1155 CKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASCKAG 1271
              K   K+    L++  + G Q D + YN+L     + G
Sbjct: 883  QFKRALKKHAH-LSQTTLSGGQSD-LGYNSLSKDEVRRG 919

>Q8BKF1:RPOM_MOUSE DNA-directed RNA polymerase, mitochondrial precursor - Mus musculus|
            (Mouse)
          Length = 1207

 Score = 35.8 bits (81), Expect = 0.88
 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = +3

Query: 1656 YNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQ-LLNRT 1832
            YNT++   A KG  ++ + +F  +   G+SPD  +Y + + C  R++     +Q  L + 
Sbjct: 236  YNTVMLGWARKGSFRELVYVFLMLKDAGLSPDLCSYAAALQCMGRRDQDVRTIQRCLKQM 295

Query: 1833 LALGFQVKVATFVMVIQ 1883
            +  GFQ ++    +V++
Sbjct: 296  MEEGFQPQLLFTDLVLE 312

>Q12089:AEP3_YEAST ATPase expression protein 3 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 606

 Score = 35.8 bits (81), Expect = 0.88
 Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 24/277 (8%)
 Frame = +3

Query: 1287 KTILTRLIAEGLEPNSTTYCILLHSLCNTRRWA-------EVYDLLTHMNHVNCEPDVTA 1445
            + I  ++ AEG +PN+ T+ +LL ++              EV   L  M +     DV  
Sbjct: 241  REIFAQMKAEGTKPNTITFNLLLRNVVKNSHIRKTKHPDDEVLFYLRSMRNHGVFADVIT 300

Query: 1446 YNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIR 1625
            +    N+      + + + +++       F     Y  L N    +   E+ L V   + 
Sbjct: 301  WTTCYNFL--RDEVSRQLYIVQMGEHLGNFNVNFVYTVLRNG---DYRAEDCLKV---LA 352

Query: 1626 ENGWQLVRITYNTLIDALANKGEVKKAMALFD---EMISDGISPDDITYGSLVMCFCRKN 1796
             N   + R T+   I+ L N+ +++ A  L D   + +      D       +  F  K 
Sbjct: 353  ANSLPISRKTFYLCIERLLNEEQLETASKLLDYGFQHLKSNFKLDSEAMNHFMRVFANKG 412

Query: 1797 MAEEALQLLNRTLALGFQVK--VATFVMVIQALCRDGKAEAAADILR----VMLSETKNT 1958
             ++ A    N T    +++K    TF M+ +AL R+G  +    +L+    + +SE    
Sbjct: 413  RSDLAFLCYN-TCRKIYKIKPDSQTFEMLFKALVRNGNTKNFGAVLQYIKDLKVSEGFGL 471

Query: 1959 SNSFYLSIVRRVAKSG--------RIEEAERLLQELV 2045
              S++ +    + K G         IE+A +LL  L+
Sbjct: 472  RTSYWRTKADSIFKFGSPNTLSEKSIEKARKLLGNLI 508



 Score = 33.1 bits (74), Expect = 5.7
 Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 16/210 (7%)
 Frame = +3

Query: 1347 ILLHSLCNTRRWAE----VYDLLTHMNHVNCEPDVT-----AYNIFINYFCKYGHLDQAI 1499
            IL H+  N R  ++    V  +L H+ H   +  +       YN  I +F ++       
Sbjct: 182  ILSHTKFNFRSSSKLNGIVRKMLRHLLHPTNKTTLPLRSAQVYNDSIYFFSEHFDFASCR 241

Query: 1500 GVLEKMVSDKCFPDIVTYNTLLNAICKEGMV-------EEALLVARCIRENGWQLVRITY 1658
             +  +M ++   P+ +T+N LL  + K   +       +E L   R +R +G     IT+
Sbjct: 242  EIFAQMKAEGTKPNTITFNLLLRNVVKNSHIRKTKHPDDEVLFYLRSMRNHGVFADVITW 301

Query: 1659 NTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLA 1838
             T  + L  + EV +   L+   + + +   ++ +   V+    +N    A   L    A
Sbjct: 302  TTCYNFL--RDEVSR--QLYIVQMGEHLGNFNVNFVYTVL----RNGDYRAEDCLKVLAA 353

Query: 1839 LGFQVKVATFVMVIQALCRDGKAEAAADIL 1928
                +   TF + I+ L  + + E A+ +L
Sbjct: 354  NSLPISRKTFYLCIERLLNEEQLETASKLL 383

>Q9W6M2:ESR2_SPAAU Estrogen receptor beta - Sparus aurata (Gilthead sea bream)|
          Length = 559

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 596 AISRGCTIHQTIPHSSFWPHHYHITRILPLGEIVP*PR 483
           AIS   ++HQT+  S FWP H H+   LPL  +   P+
Sbjct: 71  AISDRPSVHQTLSPSLFWPSHGHVGTTLPLHHLQARPQ 108

>P51825:AFF1_HUMAN AF4/FMR2 family member 1 - Homo sapiens (Human)|
          Length = 1210

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -3

Query: 633 GTKWPSQRPRMLCHFQGLHDPPNHPAFFVLAASLPHYPHSSAWRNRPLTAAACRASSPPD 454
           G+  PS       H Q +H P + P   +   ++ H P  +  R  P+ +   ++  PPD
Sbjct: 99  GSSIPSSSFHTSVHHQSIHTPASGP---LSVGNISHNPKMAQPRTEPMPSLHAKSCGPPD 155

Query: 453 RQHFS 439
            QH +
Sbjct: 156 SQHLT 160

>Q8BK72:RT27_MOUSE Mitochondrial 28S ribosomal protein S27 - Mus musculus (Mouse)|
          Length = 415

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 1455 FINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLV 1610
            +I    KYG  D+A+  L   V    FPD  T+N L++   K+G  ++AL V
Sbjct: 112  WIRQCLKYGAQDKALYTLVNKVQYGIFPDNFTFNLLMDYFIKKGNYKDALSV 163

>P16236:REL_CHICK C-Rel proto-oncogene protein - Gallus gallus (Chicken)|
          Length = 598

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
 Frame = -2

Query: 352 GAGPLGHKPHLWRP---APPECTILLNRHGNTMCPCARHRPGGKGSTAARAAGVRSLNWR 182
           G G     P  W+    + P  + LL+ H +        +PG +GS++  A     LNW 
Sbjct: 369 GPGKQDTLPSCWQQLFSSSPSASSLLSMHPHNSFTAEVPQPGAQGSSSLPAFHDNPLNWP 428

Query: 181 REWRTDGARNSGSTRQGPERKSLAAAEARPDSSH 80
            E  +   RN GST  G     ++AA+ +  SS+
Sbjct: 429 DEKDSSFYRNFGST-NGMGAAMVSAADMQSASSN 461

>Q8VHJ7:PRGC2_MOUSE Peroxisome proliferator-activated receptor gamma coactivator 1-beta -|
            Mus musculus (Mouse)
          Length = 1014

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
 Frame = -2

Query: 256  CARHRPGGKGSTAARAAGVRSLNWRREWRTDGARNSGSTRQGPERKSLAAAEAR------ 95
            C+R R     S+ +  +     N+RRE R   +  + S R   +R+  A  E R      
Sbjct: 840  CSRSRSSSGSSSCSSWSPATRKNFRRESRGPCSDGTPSVRHARKRREKAIGEGRVVYIRN 899

Query: 94   --PDSSHRRLASKVVRYGELQDCASCSRS 14
               D S R L  +   +GE+ +C   +RS
Sbjct: 900  LSSDMSSRELKKRFEVFGEIVECQVLTRS 928

>Q57711:Y941_METJA TPR repeat-containing protein MJ0941 - Methanococcus jannaschii|
          Length = 338

 Score = 34.3 bits (77), Expect = 2.5
 Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
 Frame = +3

Query: 1674 ALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQV 1853
            AL+ KGE+K+A+  F+E++S   S + IT+  +   +      +EAL+  N+  ALG + 
Sbjct: 72   ALSAKGEIKEAITTFEELLSYE-SKNPITWVFVGQLYGMSGNCDEALKCYNK--ALGIEN 128

Query: 1854 KVATFVMVIQALCRD--GKAEAAADILRVMLSETKNTSNSFYLSIVRRVAKSGRIEEAER 2027
            +  +   +++ +C +  G+ +        +L+ T N     ++     + K GR E+A  
Sbjct: 129  RFLS-AFLLKTICLEFLGEYDELLKCYNEVLTYTPNFV-PMWVKKAEILRKLGRYEDALL 186

Query: 2028 LLQELVDCK 2054
             L   ++ K
Sbjct: 187  CLNRALELK 195

>Q6CIF3:AEP3_KLULA ATPase expression protein 3 - Kluyveromyces lactis (Yeast) (Candida|
            sphaerica)
          Length = 593

 Score = 34.3 bits (77), Expect = 2.5
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
 Frame = +3

Query: 1287 KTILTRLIAEGLEPNSTTYCILLHSLCNTRR-------WAEVYDLLTHMNHVNCEPDVTA 1445
            + +  ++ +EG+ PN  TY ++L +L    R       + E    L  M   N   DV  
Sbjct: 233  RELYAQMKSEGIAPNVQTYNLMLRNLLRNSRLIKQQLPYREAIFYLERMKKENISADVIT 292

Query: 1446 YNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIR 1625
            +N    YF    ++ +AI  LEKMV ++  P  +TY+ L   + +E +    ++    +R
Sbjct: 293  WNTC--YFLLKDNISRAI-FLEKMV-ERGVP--LTYHLLYGILEEEDIPFNVII--DFLR 344

Query: 1626 EN----GWQLVRITYNTLI 1670
            EN      ++++I + +LI
Sbjct: 345  ENDIPVDTKIIKICHRSLI 363

>P48237:YG3M_YEAST Uncharacterized protein YGR150C - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 864

 Score = 33.9 bits (76), Expect = 3.3
 Identities = 21/58 (36%), Positives = 32/58 (55%)
 Frame = +3

Query: 1512 KMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNTLIDALAN 1685
            K +S K FPDI TYNT+L    KE    +AL + + I+++  +    TY  +   LA+
Sbjct: 347  KFLSTKHFPDICTYNTMLRICEKERNFPKALDLFQEIQDHNIKPTTNTYIMMARVLAS 404

>Q2WGD3:YCF1_SELUN Putative protein ycf1 - Selaginella uncinata (Blue spikemoss)|
            (Peacock spikemoss)
          Length = 1601

 Score = 33.9 bits (76), Expect = 3.3
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -2

Query: 316  RPAPPECTILLNRHGNTMCPCARHRPGGKGSTAARAAGVRSLN--WRREWRTDGARNSGS 143
            +  PP   IL +    T+CP + H   G      R AG R L   +  E R+ GAR+ G 
Sbjct: 1472 KSVPPRTGILEDGGDKTICPHSSHI--GDVPLPKRRAGSRILESFYLAEGRSRGARSEGG 1529

Query: 142  TRQGPERK 119
            T +G ER+
Sbjct: 1530 TVEGHERR 1537

>Q04592:PCSK5_MOUSE Proprotein convertase subtilisin/kexin type 5 precursor - Mus|
            musculus (Mouse)
          Length = 1877

 Score = 33.9 bits (76), Expect = 3.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 1143 VDLVCKKCGPKRAMEVLNELAMEGCQPDVVTYNALISASC 1262
            V+ VCK C P+R  + ++E   + C PD   YN +   SC
Sbjct: 1346 VEGVCKHC-PERCQDCIHEKTCKECMPDFFLYNDMCHRSC 1384

>Q32PI8:RT27_BOVIN Mitochondrial 28S ribosomal protein S27 - Bos taurus (Bovine)|
          Length = 415

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
 Frame = +3

Query: 1482 HLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEALLVARCIRE--NGWQLVRIT 1655
            HL     +++K    K     +T +  ++ I     ++ A       R   N W L   T
Sbjct: 49   HLADLASLMDKTYERKLPVSSLTISRFVDNISSREEIDHAEYYLYKFRHSPNCWYLRNWT 108

Query: 1656 YNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCFCRKNMAEEALQLL 1823
             +T I      G   KA+      +  GI PD+ T+  L+  F +K   ++AL ++
Sbjct: 109  IHTWIRQCLKYGAQDKALYTLVNKVQYGIFPDNYTFNLLMDHFIKKENYKDALSVV 164

>Q7MHB1:METH_VIBVY Methionine synthase - Vibrio vulnificus (strain YJ016)|
          Length = 1226

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
 Frame = +3

Query: 1545 VTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNT-LIDA----------LANKG 1691
            VT +     + KE + +EAL VAR   ENG Q++ I  +  ++DA           A++ 
Sbjct: 366  VTGSARFKRLIKEELYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEP 425

Query: 1692 EVKKAMALFD----EMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKV 1859
            E+ K   + D    E+I  G+    I    +V     K   E+ ++        G  V V
Sbjct: 426  EISKVPIMVDSSKWEVIEAGLK--CIQGKGIVNSISLKEGKEKFVEQAKLIRRYGAAVIV 483

Query: 1860 ATFVMVIQALCRDGKAEAAADILRVMLSE 1946
              F  V QA  R+ K E      R+++ E
Sbjct: 484  MAFDEVGQADTRERKLEICTKAYRILVDE 512

>Q8DCJ7:METH_VIBVU Methionine synthase - Vibrio vulnificus|
          Length = 1226

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 15/149 (10%)
 Frame = +3

Query: 1545 VTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNT-LIDA----------LANKG 1691
            VT +     + KE + +EAL VAR   ENG Q++ I  +  ++DA           A++ 
Sbjct: 366  VTGSARFKRLIKEELYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEP 425

Query: 1692 EVKKAMALFD----EMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKV 1859
            E+ K   + D    E+I  G+    I    +V     K   E+ ++        G  V V
Sbjct: 426  EISKVPIMVDSSKWEVIEAGLK--CIQGKGIVNSISLKEGKEKFVEQAKLIRRYGAAVIV 483

Query: 1860 ATFVMVIQALCRDGKAEAAADILRVMLSE 1946
              F  V QA  R+ K E      R+++ E
Sbjct: 484  MAFDEVGQADTRERKLEICTKAYRILVDE 512

>Q87L95:METH_VIBPA Methionine synthase - Vibrio parahaemolyticus|
          Length = 1226

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
 Frame = +3

Query: 1545 VTYNTLLNAICKEGMVEEALLVARCIRENGWQLVRITYNT-LIDA----------LANKG 1691
            VT +     + KE   +EAL VAR   ENG Q++ I  +  ++DA           A++ 
Sbjct: 366  VTGSARFKRLIKEEQYDEALEVARQQVENGAQIIDINMDEGMLDAQACMVRFLNLCASEP 425

Query: 1692 EVKKAMALFD----EMISDGISPDDITYGSLVMCFCRKNMAEEALQLLNRTLALGFQVKV 1859
            E+ K   + D    E+I  G+    I    +V     K   E+ ++        G  V V
Sbjct: 426  EISKVPIMVDSSKWEVIEAGLK--CIQGKGIVNSISLKEGKEKFVEQAKLIRRYGAAVIV 483

Query: 1860 ATFVMVIQALCRDGKAEAAADILRVMLSE 1946
              F  V QA  R  K E   +  R+++ E
Sbjct: 484  MAFDEVGQAETRTRKLEICTNAYRILVDE 512

>Q8BP00:IQCB1_MOUSE IQ calmodulin-binding motif-containing protein 1 - Mus musculus|
           (Mouse)
          Length = 598

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +3

Query: 546 ERRMRDGLVDRAAPGNGRASGDVERAILSLQAKPWKHLGQNSNEGVDLPKDK-----GML 710
           E +  +  + R+ P   +A       +  +QA  WK LG+   + VD+PKD+     GML
Sbjct: 531 EGKEPEQFLSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEEPGDEVDVPKDELSIDLGML 590

Query: 711 YTGNLR 728
           + G  +
Sbjct: 591 FIGGTK 596

>Q9ERB4:CSPG2_RAT Versican core protein precursor - Rattus norvegicus (Rat)|
          Length = 2738

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 1416 HVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI---VTYNTLLNAICKEG 1586
            H N + +    N  + Y CK G +  A G    + + K F  +      N+L+   CK+G
Sbjct: 2613 HENGQWNDVPCNYHLTYTCKKGTV--ACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDG 2670

Query: 1587 MVEEALLVARCIRENGWQLVRIT 1655
             ++  L   RC+    W + +IT
Sbjct: 2671 FIQRHLPTIRCLGNGRWAMPKIT 2693

>Q62059:CSPG2_MOUSE Versican core protein precursor - Mus musculus (Mouse)|
          Length = 3357

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 1416 HVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI---VTYNTLLNAICKEG 1586
            H N + +    N  + Y CK G +  A G    + + K F  +      N+L+   CK+G
Sbjct: 3233 HENGQWNDVPCNYHLTYTCKKGTV--ACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDG 3290

Query: 1587 MVEEALLVARCIRENGWQLVRIT 1655
             ++  L   RC+    W + +IT
Sbjct: 3291 FIQRHLPTIRCLGNGRWAMPKIT 3313

>P13611:CSPG2_HUMAN Versican core protein precursor - Homo sapiens (Human)|
          Length = 3396

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 1416 HVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI---VTYNTLLNAICKEG 1586
            H N + +    N  + Y CK G +  A G    + + K F  +      N+L+   CK+G
Sbjct: 3271 HENGQWNDVPCNYHLTYTCKKGTV--ACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDG 3328

Query: 1587 MVEEALLVARCIRENGWQLVRIT 1655
             ++  L   RC+    W + +IT
Sbjct: 3329 FIQRHLPTIRCLGNGRWAIPKIT 3351

>P81282:CSPG2_BOVIN Versican core protein precursor - Bos taurus (Bovine)|
          Length = 3381

 Score = 32.7 bits (73), Expect = 7.4
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +3

Query: 1416 HVNCEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDI---VTYNTLLNAICKEG 1586
            H N + +    N  + Y CK G +  A G    + + K F  +      N+L+   CK+G
Sbjct: 3256 HENGQWNDVPCNYHLTYTCKKGTV--ACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDG 3313

Query: 1587 MVEEALLVARCIRENGWQLVRIT 1655
             ++  L   RC+    W + +IT
Sbjct: 3314 FIQRHLPTIRCLGNGRWAMPKIT 3336

>Q6UXZ0:TMIG1_HUMAN Transmembrane and immunoglobulin domain-containing protein 1|
            precursor - Homo sapiens (Human)
          Length = 262

 Score = 32.3 bits (72), Expect = 9.7
 Identities = 30/156 (19%), Positives = 69/156 (44%)
 Frame = +3

Query: 1425 CEPDVTAYNIFINYFCKYGHLDQAIGVLEKMVSDKCFPDIVTYNTLLNAICKEGMVEEAL 1604
            C   ++  +  I++ C+ G  DQ++ V   +V +  FP +++ N       +EG      
Sbjct: 88   CVSSISENDNGISFTCRLGR-DQSVSV--SVVLNVTFPPLLSGNDFQTV--EEG--SNVK 140

Query: 1605 LVARCIRENGWQLVRITYNTLIDALANKGEVKKAMALFDEMISDGISPDDITYGSLVMCF 1784
            LV         Q++    ++L+D   ++ ++++    F   I+    PD+ TY  +    
Sbjct: 141  LVCNVKANPQAQMMWYKNSSLLDLEKSRHQIQQTSESFQLSITKVEKPDNGTYSCIAKSS 200

Query: 1785 CRKNMAEEALQLLNRTLALGFQVKVATFVMVIQALC 1892
             +    +  L + ++T+ +  +  +A  V++   LC
Sbjct: 201  LKTESLDFHLIVKDKTVGVPIEPIIAACVVIFLTLC 236


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 457,918,507
Number of extensions: 10603069
Number of successful extensions: 27355
Number of sequences better than 10.0: 31
Number of HSP's gapped: 27274
Number of HSP's successfully gapped: 59
Length of query: 828
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 706
Effective length of database: 67,222,449
Effective search space: 47459048994
Effective search space used: 47459048994
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)