ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf72f08 |
|---|---|
| Clone Library Name | barley_pub |
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 162 bits (410), Expect = 3e-39 Identities = 104/279 (37%), Positives = 154/279 (55%), Gaps = 22/279 (7%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 GS Q D KMFIGGLS QTS + ++YF K+GEI + ++M++ T++ RGFGF+ Sbjct: 11 GSANDSQHD---PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67 Query: 248 TYSDPAIVDRVI-EDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFK 424 T++DPA VD+V+ + +H +D K ++ K P+ A P +TKKIFVGGL ++ K Sbjct: 68 TFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKA 604 +F +FGKV + ++ D +TNR RGFGF+ F+ E V+++ ++I N VE KKA Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEI--NNKMVECKKA 185 Query: 605 EPKKPSNPPHSLDSKPRRSPYAD----------GYDGFASSYNNGGRLAPYKSTGFGTR- 751 +PK+ PP + R PY GY F ++Y GR P + +G + Sbjct: 186 QPKEVMFPP-GTRGRARGLPYTMDAFMLGMGMLGYPNFVATY---GRGYPGFAPSYGYQF 241 Query: 752 PGSYSSAYVP----------GSYSSAYVPGSYSSAYVPG 838 PG ++AY P GS S+ PG + A PG Sbjct: 242 PGFPAAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPG 280
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 158 bits (399), Expect = 5e-38 Identities = 100/267 (37%), Positives = 152/267 (56%), Gaps = 13/267 (4%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 GS Q D KMFIGGLS QTS + ++YF K+GEI + ++M++ T++ RGFGF+ Sbjct: 11 GSANDSQHD---PGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67 Query: 248 TYSDPAIVDRVI-EDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFK 424 T++DPA VD+V+ + +H +D K ++ K P+ A P +TKKIFVGGL ++ K Sbjct: 68 TFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKA 604 +F +FGKV + ++ D +TNR RGFGF+ F+ E V+++ ++I N VE KKA Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEI--NNKMVECKKA 185 Query: 605 EPKKPSNPPHSLDSKPRRSPYAD----------GYDGFASSYNNGGRLAPYKSTGFGTR- 751 +PK+ PP + R PY GY F ++Y GR P + +G + Sbjct: 186 QPKEVMFPP-GTRGRARGLPYTMDAFMLGMGMLGYPNFVATY---GRGYPGFAPSYGYQF 241 Query: 752 PGSYSSAYVP-GSYSSAYVPGSYSSAY 829 PG ++AY P + + A GS ++Y Sbjct: 242 PGFPAAAYGPVAAAAVAAARGSVLNSY 268
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 151 bits (382), Expect = 5e-36 Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 KMFIGGLS QT+ +EYFG++GE+ + ++M++ T++ RGFGF+T+ D A VD+V+ + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H +D K ++ K P+ A P +TKKIFVGGL ++ K +F +FGKV + + Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D +TNR RGFGF+ F++E V+++ ++I N VE KKA+PK+ +P S Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI--NNKMVECKKAQPKEVMSPTGSARG 198 Query: 647 KPRRSPYADGYDGF 688 + R PY G D F Sbjct: 199 RSRVMPY--GMDAF 210 Score = 58.2 bits (139), Expect = 7e-08 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Frame = +2 Query: 335 PKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIV 514 P A+P K+F+GGL + +++F +FG+V E ++ D T RSRGFGF+ Sbjct: 8 PGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67 Query: 515 FDAEKTVDELLAKKGNKIDLNGTQVEV---KKAEPK 613 F + VD++LA+ +++D +V ++A+PK Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPK 103
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 151 bits (381), Expect = 6e-36 Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 KMFIGGLS QT+ +EYFG++GE+ + ++M++ T++ RGFGF+T+ D A VD+V+ + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H +D K ++ K P+ A P +TKKIFVGGL ++ K +F +FGKV + + Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAML 140 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D +TNR RGFGF+ F++E V+++ ++I N VE KKA+PK+ +P S Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI--NNKMVECKKAQPKEVMSPTGSARG 198 Query: 647 KPRRSPYADGYDGF 688 + R PY G D F Sbjct: 199 RSRVMPY--GMDAF 210 Score = 58.2 bits (139), Expect = 7e-08 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Frame = +2 Query: 335 PKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIV 514 P A+P K+F+GGL + +++F +FG+V E ++ D T RSRGFGF+ Sbjct: 8 PGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67 Query: 515 FDAEKTVDELLAKKGNKIDLNGTQVEV---KKAEPK 613 F + VD++LA+ +++D +V ++A+PK Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPK 103
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 151 bits (381), Expect = 6e-36 Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 KMFIGGLS QT+ +EYFG++GE+ + ++M++ T++ RGFGF+T+ D A VD+V+ + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H +D K ++ K P+ A P +TKKIFVGGL ++ K +F +FGKV + + Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAML 140 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D +TNR RGFGF+ F++E V+++ ++I N VE KKA+PK+ +P S Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEI--NNKMVECKKAQPKEVMSPTGSARG 198 Query: 647 KPRRSPYADGYDGF 688 + R PY G D F Sbjct: 199 RSRVMPY--GMDAF 210 Score = 58.2 bits (139), Expect = 7e-08 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Frame = +2 Query: 335 PKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIV 514 P A+P K+F+GGL + +++F +FG+V E ++ D T RSRGFGF+ Sbjct: 8 PGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67 Query: 515 FDAEKTVDELLAKKGNKIDLNGTQVEV---KKAEPK 613 F + VD++LA+ +++D +V ++A+PK Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPK 103
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 151 bits (381), Expect = 6e-36 Identities = 86/249 (34%), Positives = 136/249 (54%), Gaps = 7/249 (2%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI 283 + KMFIGGL+ T+ +EYFGKYG + D IMK+ T + RGFGF+++ P+ VD V+ Sbjct: 158 SCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217 Query: 284 EDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 + H++DGK ++ KR IP+ + KT KIFVGG+ +R EF++FFS++G +++ + Sbjct: 218 KTQHILDGKVIDPKRAIPRD----EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQ 273 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPK----KPSNPP 631 ++ D T +SRGFGF+ +D+ VD + K ID ++E+K+AEP+ K SN Sbjct: 274 LMLDKDTGQSRGFGFVTYDSADAVDRVCQNK--FIDFKDRKIEIKRAEPRHMQQKSSN-- 329 Query: 632 HSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAY---VPGSYSSAY 802 + NNGG + FG + G ++ Y + G Y+ Sbjct: 330 --------------------NGGNNGGNNMNRRGGNFGNQ-GDFNQMYQNPMMGGYNPMM 368 Query: 803 VPGSYSSAY 829 P + + Y Sbjct: 369 NPQAMTDYY 377
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 142 bits (359), Expect = 2e-33 Identities = 88/240 (36%), Positives = 128/240 (53%), Gaps = 16/240 (6%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+F+GGL T+ T + YF +YGE+VD VIMK++ T + RGFGF+ + DP V V+ Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLK--------------DFKTKKIFVGGLPTALRDDEFK 424 H +DG+ ++ K P+G P + K+ KIFVGG+P + E + Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELR 130 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKA 604 ++F KFG V E +I D R RGFGFI F+ E++VD+ A + D+ G +VEVK+A Sbjct: 131 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ--AVNMHFHDIMGKKVEVKRA 188 Query: 605 EPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGF-GTRPGSYSSAYVP 781 EP+ N A G G AS + G R+AP + G+ G P ++ Y P Sbjct: 189 EPRDSKN-------------QAPGQPG-ASQW--GSRVAPSAANGWAGQPPPTWQQGYGP 232 Score = 70.5 bits (171), Expect = 1e-11 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 1/86 (1%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 + D + + K+F+GG+ +EYF K+G + + V++ + Q+PRGFGFIT+ D Sbjct: 106 RSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQ 165 Query: 266 IVDRVIEDN-HVIDGKQVEIKRTIPK 340 VD+ + + H I GK+VE+KR P+ Sbjct: 166 SVDQAVNMHFHDIMGKKVEVKRAEPR 191
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 142 bits (358), Expect = 3e-33 Identities = 90/250 (36%), Positives = 132/250 (52%), Gaps = 16/250 (6%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 M K+F+GGL T+ T + YF +YGE+VD VIMK++ T + RGFGF+ + D Sbjct: 1 MNNSGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60 Query: 260 PAIVDRVIEDN-HVIDGKQVEIKRTIPKGAAPLK--------------DFKTKKIFVGGL 394 P V V+ H +DG+ ++ K P+G P + + K+ KIFVGG+ Sbjct: 61 PNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGI 120 Query: 395 PTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDL 574 P + E +++F KFG V E +I D R RGFGFI F+ E++VD+ A + D+ Sbjct: 121 PHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ--AVNMHFHDI 178 Query: 575 NGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGF-GTR 751 G +VEVK+AEP+ DSK + A G G AS + G R+ P + G+ G Sbjct: 179 MGKKVEVKRAEPR---------DSKSQ----APGQPG-ASQW--GSRVVPNAANGWAGQP 222 Query: 752 PGSYSSAYVP 781 P ++ Y P Sbjct: 223 PPTWQQGYGP 232
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 142 bits (357), Expect = 4e-33 Identities = 69/180 (38%), Positives = 116/180 (64%), Gaps = 1/180 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+F+GGLS +T+ YF ++G+I+D V+MK + + RGFGF+T++DP V+ V+++ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H +DG+ ++ K P+ K K+F+GGLP+ + + + + FF+++GKV E I Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D +SRGFGF+ F+ E +V+ + ++ I+LNG QVE+KKAEP+ S +S +S Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNER--YINLNGKQVEIKKAEPRDGSGGQNSNNS 185
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 141 bits (355), Expect = 7e-33 Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 16/194 (8%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 M Q G K+F+GGL T+ T + YF +YGE+VD VIMK++ T + RGFGF+ + D Sbjct: 1 MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60 Query: 260 PAIVDRVIEDN-HVIDGKQVEIKRTIPKGAAP---------------LKDFKTKKIFVGG 391 P V V+ H +DG+ ++ K P+G P ++ ++ KIFVGG Sbjct: 61 PNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGG 120 Query: 392 LPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKID 571 +P + E K++F++FG V E +I D R RGFGFI F+ E++VD+ A + D Sbjct: 121 IPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ--AVNMHFHD 178 Query: 572 LNGTQVEVKKAEPK 613 + G +VEVK+AEP+ Sbjct: 179 IMGKKVEVKRAEPR 192
>Q99729:ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B - Homo sapiens (Human)| Length = 331 Score = 137 bits (344), Expect = 1e-31 Identities = 93/259 (35%), Positives = 140/259 (54%), Gaps = 10/259 (3%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI 283 A KMF+GGLS TS K+YF K+GE+VD I + +T + RGFGFI + D A V++V+ Sbjct: 67 AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVL 126 Query: 284 ED-NHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGL-PTALRDDEFKDFFSKFGKVVE 457 + H +DG+ ++ PK A +K KKIFVGGL P + +++ +++F +FG++ Sbjct: 127 DQKEHRLDGRVID-----PKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEA 181 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK------- 616 E+ D N+ RGF FI F E+ V ++L KK + + +G++ E+K A+PK+ Sbjct: 182 IELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTV--SGSKCEIKVAQPKEVYQQQQY 239 Query: 617 PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSS 796 S + + R S G G + S+N G Y + G+G Y Y PG Sbjct: 240 GSGGRGNRNRGNRGSGGGGGGGGQSQSWNQG--YGNYWNQGYG-----YQQGYGPGYGGY 292 Query: 797 AYVPGSYSSAYVPG-DYSR 850 Y P Y Y PG DYS+ Sbjct: 293 DYSPYGY-YGYGPGYDYSQ 310
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 134 bits (338), Expect = 6e-31 Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 12/268 (4%) Frame = +2 Query: 77 EMKQQDGASAA--------KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPR 232 E+K ++G+ A K+F+GGL+ T+ +E++ ++GEI D ++M++ T++ R Sbjct: 5 EIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSR 64 Query: 233 GFGFITYSDPAIVDRVIEDN-HVIDGKQVEIKRTIPKGAAPLKD--FKTKKIFVGGLPTA 403 GFGF+T+S VD ++ H+IDGK V+ KR +P+ + TK+++V G+ Sbjct: 65 GFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRED 124 Query: 404 LRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGT 583 +D ++F+K+G V + EII D +T + RGFGF+ FD +VD+ + +K + + NG Sbjct: 125 HTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV--NGH 182 Query: 584 QVEVKKAEPK-KPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGS 760 + +V+K K + S + D + R DG G YN GG G G G Sbjct: 183 RCDVRKGLSKDEMSKAQMNRDRETRGGRSRDGQRG---GYNGGG--------GGGGGWGG 231 Query: 761 YSSAYVPGSYSSAYVPGSYSSAYVPGDY 844 + PG+Y PG GDY Sbjct: 232 PAQRGGPGAYGG---PGGGGQGGYGGDY 256 Score = 75.5 bits (184), Expect = 4e-13 Identities = 43/114 (37%), Positives = 65/114 (57%) Frame = +2 Query: 314 VEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRS 493 VEIK G A L+ +KIFVGGL + DD ++F+S+FG++ + ++ D +T RS Sbjct: 4 VEIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRS 63 Query: 494 RGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR 655 RGFGF+ F + VD + ++ + ID G V+ K+A P+ N S S R Sbjct: 64 RGFGFVTFSGKTEVDAAMKQRPHIID--GKTVDPKRAVPRDDKNRSESNVSTKR 115
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 132 bits (332), Expect = 3e-30 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 3/248 (1%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 E K+++ K+FIGGLS +T+ + + Y+ ++G++ D V+M++ +++ RGFGF+T+S Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70 Query: 257 DPAIVDRVIEDN-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKD 427 A VD + H IDG+ VE KR + + P KK+FVGG+ + +D Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130 Query: 428 FFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAE 607 +F ++GK+ EII D + + RGFGF+ FD VD+++ +K + I NG EV+KA Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTI--NGHNAEVRKAL 188 Query: 608 PKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGS 787 ++ S S+ R G GF S GG P + F Y S G Sbjct: 189 SRQEMQEVQS--SRSGRG----GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGD 242 Query: 788 YSSAYVPG 811 + Y G Sbjct: 243 GYNGYGGG 250 Score = 60.8 bits (146), Expect = 1e-08 Identities = 30/101 (29%), Positives = 58/101 (57%) Frame = +2 Query: 329 TIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGF 508 T+P + + +K+F+GGL ++ ++++ ++GK+ + ++ D ++ RSRGFGF Sbjct: 7 TVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 66 Query: 509 IVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + F + VD +A + + ID G VE K+A ++ S P Sbjct: 67 VTFSSMAEVDAAMAARPHSID--GRVVEPKRAVAREESGKP 105
>P07909:ROA1_DROME Heterogeneous nuclear ribonucleoprotein A1 - Drosophila| melanogaster (Fruit fly) Length = 365 Score = 132 bits (332), Expect = 3e-30 Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 3/172 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL +T+ K +F K+G IVD V+MK+ T++ RGFGFITYS +++D + Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91 Query: 290 N-HVIDGKQVEIKRTIPKG--AAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR +P+ +P KK+FVG L + +D+F FG +V+ Sbjct: 92 RPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDI 151 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 I+ D T + RGF F+ FD VD+++ +K ++ LNG V+VKKA PK+ Sbjct: 152 NIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQ--LNGKMVDVKKALPKQ 201 Score = 65.9 bits (159), Expect = 4e-10 Identities = 33/89 (37%), Positives = 52/89 (58%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL D+ K F K+G +V+ ++ D T RSRGFGFI + +DE Sbjct: 31 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHS 637 + +KID G VE K+A P++ + P++ Sbjct: 91 SRPHKID--GRVVEPKRAVPRQDIDSPNA 117 Score = 65.9 bits (159), Expect = 4e-10 Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 GA+ K+F+G L + ++YF +G IVD I+ ++ T K RGF F+ + D VD Sbjct: 118 GATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVD 177 Query: 275 RVI-EDNHVIDGKQVEIKRTIPK 340 +V+ + H ++GK V++K+ +PK Sbjct: 178 KVVLQKQHQLNGKMVDVKKALPK 200
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 132 bits (331), Expect = 4e-30 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 3/248 (1%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 E K+++ K+FIGGLS +T+ + + Y+ ++G++ D V+M++ +++ RGFGF+T+S Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70 Query: 257 DPAIVDRVIEDN-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKD 427 A VD + H IDG+ VE KR + + P KK+FVGG+ + +D Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130 Query: 428 FFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAE 607 +F ++GK+ EII D + + RGFGF+ FD VD+++ +K + I NG EV+KA Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI--NGHNAEVRKAL 188 Query: 608 PKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGS 787 ++ S S+ R G GF S GG P + F Y S G Sbjct: 189 SRQEMQEVQS--SRSGRG----GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGD 242 Query: 788 YSSAYVPG 811 + Y G Sbjct: 243 GYNGYGGG 250 Score = 60.8 bits (146), Expect = 1e-08 Identities = 30/101 (29%), Positives = 58/101 (57%) Frame = +2 Query: 329 TIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGF 508 T+P + + +K+F+GGL ++ ++++ ++GK+ + ++ D ++ RSRGFGF Sbjct: 7 TVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 66 Query: 509 IVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + F + VD +A + + ID G VE K+A ++ S P Sbjct: 67 VTFSSMAEVDAAMAARPHSID--GRVVEPKRAVAREESGKP 105
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 132 bits (331), Expect = 4e-30 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 3/248 (1%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 E K+++ K+FIGGLS +T+ + + Y+ ++G++ D V+M++ +++ RGFGF+T+S Sbjct: 11 ERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 70 Query: 257 DPAIVDRVIEDN-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKD 427 A VD + H IDG+ VE KR + + P KK+FVGG+ + +D Sbjct: 71 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 130 Query: 428 FFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAE 607 +F ++GK+ EII D + + RGFGF+ FD VD+++ +K + I NG EV+KA Sbjct: 131 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI--NGHNAEVRKAL 188 Query: 608 PKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGS 787 ++ S S+ R G GF S GG P + F Y S G Sbjct: 189 SRQEMQEVQS--SRSGRG----GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGD 242 Query: 788 YSSAYVPG 811 + Y G Sbjct: 243 GYNGYGGG 250 Score = 60.8 bits (146), Expect = 1e-08 Identities = 30/101 (29%), Positives = 58/101 (57%) Frame = +2 Query: 329 TIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGF 508 T+P + + +K+F+GGL ++ ++++ ++GK+ + ++ D ++ RSRGFGF Sbjct: 7 TVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 66 Query: 509 IVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + F + VD +A + + ID G VE K+A ++ S P Sbjct: 67 VTFSSMAEVDAAMAARPHSID--GRVVEPKRAVAREESGKP 105
>Q08473:SQD_DROME RNA-binding protein squid - Drosophila melanogaster (Fruit fly)| Length = 344 Score = 131 bits (329), Expect = 7e-30 Identities = 89/275 (32%), Positives = 135/275 (49%), Gaps = 19/275 (6%) Frame = +2 Query: 71 SGEMKQQDGASAA-----KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRG 235 +G Q AS K+F+GGLS +T+ +++FGKYGEI + + T + RG Sbjct: 39 NGSSDNQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRG 98 Query: 236 FGFITYSDPAIVDRV-IEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F FI +++ +D+V D H+I+ K+V+ K+ + KIFVGGL T + D Sbjct: 99 FAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHG---------KIFVGGLTTEISD 149 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVE 592 +E K +F +FG +VE E+ D ++ +GF FI FD+E+ V +LL K K + G +V+ Sbjct: 150 EEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL--KTPKQKIAGKEVD 207 Query: 593 VKKAEPKKPSNPPHSLDSKPR------------RSPYADGYDGFASSYNNGGRLAPYKST 736 VK+A PK + + PR R Y + +DG S GG Y + Sbjct: 208 VKRATPKPENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYGAG 267 Query: 737 GFGT-RPGSYSSAYVPGSYSSAYVPGSYSSAYVPG 838 G+G G Y + Y G Y G + Y G Sbjct: 268 GYGDYYAGGYYNGYDYGYDGYGYGGGFEGNGYGGG 302
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 130 bits (328), Expect = 9e-30 Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 3/237 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS QT+ + + Y+ ++G++ D V+M++ +++ RGFGF+T+S A VD + Sbjct: 10 KLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR + + P KK+FVGG+ + +D+F+++GK+ Sbjct: 70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTI 129 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 EII D + + RGFGF+ FD VD+++ +K + I NG EV+KA ++ S Sbjct: 130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI--NGHNAEVRKALSRQEMQEVQS- 186 Query: 641 DSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S+ R G GF S GG P + F Y S G + Y G Sbjct: 187 -SRSGRG----GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGG 238 Score = 60.1 bits (144), Expect = 2e-08 Identities = 28/87 (32%), Positives = 53/87 (60%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL ++ ++++ ++GK+ + ++ D ++ RSRGFGF+ F + VD +A Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + + ID G VE K+A ++ S P Sbjct: 69 ARPHSID--GRVVEPKRAVAREESGKP 93
>P21522:ROA1_SCHAM Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog -| Schistocerca americana (American grasshopper) Length = 342 Score = 130 bits (328), Expect = 9e-30 Identities = 68/171 (39%), Positives = 105/171 (61%), Gaps = 3/171 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL +T+ + K++F ++GEIVD V+MK+ T++ RGFGFITYS +VD Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77 Query: 290 N-HVIDGKQVEIKRTIPKG--AAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR +P+ P KK+FVGG+ + +++ +D+F ++G VV Sbjct: 78 RPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSA 137 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPK 613 I+ D T + RGF F+ FD VD++ + ++I G ++VKKA PK Sbjct: 138 AIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQI--RGKHIDVKKALPK 186 Score = 79.0 bits (193), Expect = 4e-14 Identities = 33/91 (36%), Positives = 58/91 (63%), Gaps = 1/91 (1%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 + + GA+ K+F+GG+ + ++YF +YG +V A I+ ++ T+K RGF F+ + D Sbjct: 100 RPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDY 159 Query: 263 AIVDRV-IEDNHVIDGKQVEIKRTIPKGAAP 352 VD++ + NH I GK +++K+ +PKG AP Sbjct: 160 DPVDKICLSRNHQIRGKHIDVKKALPKGDAP 190 Score = 61.6 bits (148), Expect = 7e-09 Identities = 31/89 (34%), Positives = 50/89 (56%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL D+ K F ++G++V+ ++ D T RSRGFGFI + VD+ Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHS 637 + +K+D G VE K+A P+ P + Sbjct: 77 ARPHKVD--GRVVEPKRAVPRTEIGRPEA 103
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus| (Rat) Length = 379 Score = 129 bits (324), Expect = 3e-29 Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 K+FIGGLS +T+ + +E+F K+G + D V+M++ T++ RGFGF+TYS VD + Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 287 DNHVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F K+GK+ Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E++ D + + RGF F+ FD TVD+++ +K + I NG EVKKA K+ S Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI--NGHNCEVKKALSKQEMQSAGSQ 213 Query: 641 DSK--------PRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSY 763 + R + G F N GGR Y G G+R GSY Sbjct: 214 RGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGR-GGYGGGGGGSR-GSY 260 Score = 63.9 bits (154), Expect = 1e-09 Identities = 33/103 (32%), Positives = 57/103 (55%) Frame = +2 Query: 323 KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGF 502 +R +G P + + +K+F+GGL DD ++ F K+G + + ++ D T RSRGF Sbjct: 19 RRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 78 Query: 503 GFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 GF+ + + VD + + +K+D G VE K+A ++ S P Sbjct: 79 GFVTYSCVEEVDAAMCARPHKVD--GRVVEPKRAVSREDSVKP 119
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 129 bits (324), Expect = 3e-29 Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 K+FIGGLS +T+ + +E+F K+G + D V+M++ T++ RGFGF+TYS VD + Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 287 DNHVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F K+GK+ Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E++ D + + RGF F+ FD TVD+++ +K + I NG EVKKA K+ S Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI--NGHNCEVKKALSKQEMQSAGSQ 213 Query: 641 DSK--------PRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSY 763 + R + G F N GGR Y G G+R GSY Sbjct: 214 RGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGR-GGYGGGGGGSR-GSY 260 Score = 63.9 bits (154), Expect = 1e-09 Identities = 33/103 (32%), Positives = 57/103 (55%) Frame = +2 Query: 323 KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGF 502 +R +G P + + +K+F+GGL DD ++ F K+G + + ++ D T RSRGF Sbjct: 19 RRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 78 Query: 503 GFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 GF+ + + VD + + +K+D G VE K+A ++ S P Sbjct: 79 GFVTYSCVEEVDAAMCARPHKVD--GRVVEPKRAVSREDSVKP 119
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 129 bits (324), Expect = 3e-29 Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 11/229 (4%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI-E 286 K+FIGGLS +T+ + +E+F K+G + D V+M++ T++ RGFGF+TYS VD + Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95 Query: 287 DNHVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F K+GK+ Sbjct: 96 RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E++ D + + RGF F+ FD TVD+++ +K + I NG EVKKA K+ S Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI--NGHNCEVKKALSKQEMQSAGSQ 213 Query: 641 DSK--------PRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSY 763 + R + G F N GGR Y G G+R GSY Sbjct: 214 RGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGR-GGYGGGGGGSR-GSY 260 Score = 63.9 bits (154), Expect = 1e-09 Identities = 33/103 (32%), Positives = 57/103 (55%) Frame = +2 Query: 323 KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGF 502 +R +G P + + +K+F+GGL DD ++ F K+G + + ++ D T RSRGF Sbjct: 19 RRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 78 Query: 503 GFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 GF+ + + VD + + +K+D G VE K+A ++ S P Sbjct: 79 GFVTYSCVEEVDAAMCARPHKVD--GRVVEPKRAVSREDSVKP 119
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 129 bits (324), Expect = 3e-29 Identities = 79/237 (33%), Positives = 123/237 (51%), Gaps = 3/237 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + Y+ ++G++ D V+M++ +++ RGFGF+T+S A VD + Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 69 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR + + P KK+FVGG+ + +D+F ++GK+ Sbjct: 70 RPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 EII D + + RGFGF+ FD VD+++ +K + I NG EV+KA ++ S Sbjct: 130 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI--NGHNAEVRKALSRQEMQEVQS- 186 Query: 641 DSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S+ R G GF S GG P + F Y S G + Y G Sbjct: 187 -SRSGRG----GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGG 238 Score = 60.1 bits (144), Expect = 2e-08 Identities = 28/87 (32%), Positives = 53/87 (60%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL ++ ++++ ++GK+ + ++ D ++ RSRGFGF+ F + VD +A Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + + ID G VE K+A ++ S P Sbjct: 69 ARPHSID--GRVVEPKRAVAREESGKP 93
>Q02926:RB97D_DROME Ribonucleoprotein RB97D - Drosophila melanogaster (Fruit fly)| Length = 471 Score = 129 bits (323), Expect = 3e-29 Identities = 70/188 (37%), Positives = 114/188 (60%), Gaps = 3/188 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ T+ K ++G++G++VD V+M++ T++ RGFGFITY+ +VDR E+ Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLKD--FKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H+IDGK VE KR +P+ ++ KK+FVGGL ++ +++F +FG VV Sbjct: 93 RPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSV 152 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 +++ D +T + RGF F+ FD VD+ + KK + I V+VKK+ ++L Sbjct: 153 KLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKY--VHVDVKKS--------IYNL 202 Query: 641 DSKPRRSP 664 D K ++ P Sbjct: 203 DKKEKQQP 210 Score = 59.3 bits (142), Expect = 3e-08 Identities = 31/81 (38%), Positives = 48/81 (59%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL ++ K F+ ++GKVV+ ++ D +T RSRGFGFI + VD Sbjct: 32 RKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91 Query: 551 KKGNKIDLNGTQVEVKKAEPK 613 + + ID G VE K+A P+ Sbjct: 92 NRPHIID--GKTVEAKRALPR 110 Score = 54.3 bits (129), Expect = 1e-06 Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 ++ S K+F+GGL +EYF ++G +V ++ ++ T K RGF F+ + D Sbjct: 116 RETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYD 175 Query: 266 IVDR-VIEDNHVIDGKQVEIKRTI 334 VD+ +++ H I V++K++I Sbjct: 176 AVDKAILKKQHAIKYVHVDVKKSI 199
>Q99020:ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B - Mus musculus (Mouse)| Length = 285 Score = 127 bits (319), Expect = 1e-28 Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 8/217 (3%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI 283 A KMF+GGLS TS K+YF K+GE+VD I + +T + RGFGFI + D + V++V+ Sbjct: 74 AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVL 133 Query: 284 ED-NHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + H +DG+ ++ PK A +K KKIFVGGL +++ +++F +FG++ Sbjct: 134 DQKEHRLDGRVID-----PKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 188 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK-------P 619 E+ D N+ RGF FI F E V ++L KK + + +G++ E+K A+PK+ Sbjct: 189 ELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTV--SGSKCEIKVAQPKEVYQQQQYG 246 Query: 620 SNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYK 730 S + + R S G + S GG YK Sbjct: 247 SGGRGNRNRGNRGSGGGQGSTNYGKSQRRGGHQNNYK 283
>Q3SWU3:HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like - Rattus norvegicus| (Rat) Length = 322 Score = 126 bits (317), Expect = 2e-28 Identities = 93/265 (35%), Positives = 130/265 (49%), Gaps = 16/265 (6%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S KMFIGGLS TS EY ++GE+VD I + T + RGFGF+ + D A VD+V Sbjct: 49 SGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 108 Query: 281 IE-DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVV 454 +E H +DGK ++ KR KG P KK+FVGGL +++ K++F FG++ Sbjct: 109 LELKEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFGAFGEIE 163 Query: 455 EHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPH 634 E+ D TN RGF FI + E+ V +LL + ++I + E+K A+PK+ Sbjct: 164 NIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI--GSGKCEIKVAQPKEVYRQQQ 221 Query: 635 SLDSKPRRSPYADGYDGF-------ASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYS 793 K R A G G ++N G Y G+ G+Y+SAY SYS Sbjct: 222 Q-QQKGGRGAAAGGRGGARGRGRGQGQNWNQG--FNNYYDQGY----GNYNSAYGDESYS 274 Query: 794 -------SAYVPGSYSSAYVPGDYS 847 + Y GSY DYS Sbjct: 275 GYGGYDYTGYNYGSYGYGQGYTDYS 299
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus| laevis (African clawed frog) Length = 385 Score = 125 bits (314), Expect = 4e-28 Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 11/227 (4%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + +E+F ++G++ D V+M++ T++ RGFGF+TYS VD + Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + A P KKIFVGG+ + +D+F +GK+ Sbjct: 88 RPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIETI 147 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E++ D + + RGF F+ FD TVD+++ +K + I+L+ EVKKA K+ + Sbjct: 148 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLH--NCEVKKALSKQEMQTASAQ 205 Query: 641 DSK--------PRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPG 757 + R Y G G ++ GG GFG R G Sbjct: 206 RGRGGGGSNFMGRGGNYGGGDGGGGGNFGRGG--------GFGNRGG 244 Score = 64.7 bits (156), Expect = 8e-10 Identities = 32/98 (32%), Positives = 57/98 (58%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 +G P + + +K+F+GGL DD ++ F ++GK+ + ++ D T RSRGFGF+ + Sbjct: 16 QGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTY 75 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD ++ + +K+D G VE K+A ++ S P Sbjct: 76 SCVEEVDASMSARPHKVD--GRVVEPKRAVSREDSARP 111
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus| laevis (African clawed frog) Length = 373 Score = 125 bits (314), Expect = 4e-28 Identities = 75/221 (33%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + +E+F ++G++ D V+M++ T++ RGFGF+TYS VD + Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + A P KKIFVGG+ + +D+ +GK+ Sbjct: 88 RPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIETI 147 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E++ D + + RGF F+ FD TVD+++ +K + I NG EVKKA K+ + Sbjct: 148 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI--NGHNCEVKKALSKQEM---QTA 202 Query: 641 DSKPRRSPYADGYDGFASSY--NNGGRLAPYKSTGFGTRPG 757 ++ R + G +Y +GG GFG R G Sbjct: 203 SAQRGRGGGGSNFMGRGGNYGGGDGGNFGRGGGGGFGNRGG 243 Score = 64.3 bits (155), Expect = 1e-09 Identities = 32/98 (32%), Positives = 57/98 (58%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 +G P + + +K+F+GGL DD ++ F ++GK+ + ++ D T RSRGFGF+ + Sbjct: 16 QGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTY 75 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD ++ + +K+D G VE K+A ++ S P Sbjct: 76 SCVEEVDASMSARPHKVD--GRVVEPKRAVSREDSARP 111
>Q5ZI72:HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like - Gallus gallus| (Chicken) Length = 301 Score = 124 bits (311), Expect = 8e-28 Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 2/257 (0%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +Q DG KMFIGGLS TS EY ++GE+VD I + T + RGFGF+ + D Sbjct: 26 QQDDG----KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA 81 Query: 263 AIVDRVIE-DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFS 436 A V++V+E H +DGK ++ KR KG P KK+FVGGL +++ K++F Sbjct: 82 ASVEKVLELKEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFG 136 Query: 437 KFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 FG++ E+ D TN RGF FI + E+ V +LL + ++I + E+K A+PK+ Sbjct: 137 AFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI--GSGKCEIKVAQPKE 194 Query: 617 PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSS 796 + + ++ ++ G G + GF Y Y G+Y+S Sbjct: 195 ----VYRQQQQQQKGGKSNASGGRGGGRGRGRGQGQNWNQGFN---NYYDQGY--GNYNS 245 Query: 797 AYVPGSYSSAYVPGDYS 847 AY SY S Y DYS Sbjct: 246 AYSDQSY-SGYGGYDYS 261
>Q9JJ54:HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 - Rattus norvegicus| (Rat) Length = 353 Score = 124 bits (310), Expect = 1e-27 Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 2/248 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 KMFIGGLS T+ K+YF K+G++VD + + T + RGFGF+ + + VD+V++ Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLKDFK-TKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H ++GK ++ PK A +K + KKIFVGGL +++ +++F FG+V E Sbjct: 156 KEHKLNGKVID-----PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 210 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLD 643 + D+ TN+ RGF FI F E+ V +++ KK + + L ++ E+K A K+ Sbjct: 211 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL--SKCEIKVAMSKEQYQQQQQWG 268 Query: 644 SKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSS 823 S+ + A G G S N G + Y + G+G+ G S Y G Y Y Y+S Sbjct: 269 SRGGFAGRARGRGGGPSQNWNQG-YSNYWNQGYGSY-GYNSQGY--GGY-GGYDYTGYNS 323 Query: 824 AYVPGDYS 847 Y GDYS Sbjct: 324 YYGYGDYS 331
>Q60668:HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 - Mus musculus (Mouse)| Length = 355 Score = 123 bits (309), Expect = 1e-27 Identities = 86/248 (34%), Positives = 132/248 (53%), Gaps = 2/248 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 KMFIGGLS T+ K+YF K+GE+VD + + T + RGFGF+ + + VD+V++ Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLKDFK-TKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H ++GK ++ PK A +K + KKIFVGGL +++ +++F FG+V E Sbjct: 158 KEHKLNGKVID-----PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLD 643 + D+ TN+ RGF FI F E+ V +++ KK + + L ++ E+K A K+ Sbjct: 213 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL--SKCEIKVAMSKEQYQQQQQWG 270 Query: 644 SKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSS 823 S+ + A G G S N G + Y + G+G G S Y G Y Y Y++ Sbjct: 271 SRGGFAGRARGRGGGPSQNWNQG-YSNYWNQGYGNY-GYNSQGY--GGY-GGYDYTGYNN 325 Query: 824 AYVPGDYS 847 Y GDYS Sbjct: 326 YYGYGDYS 333
>Q14103:HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 - Homo sapiens (Human)| Length = 355 Score = 123 bits (309), Expect = 1e-27 Identities = 86/248 (34%), Positives = 132/248 (53%), Gaps = 2/248 (0%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 KMFIGGLS T+ K+YF K+GE+VD + + T + RGFGF+ + + VD+V++ Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Query: 290 N-HVIDGKQVEIKRTIPKGAAPLKDFK-TKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H ++GK ++ PK A +K + KKIFVGGL +++ +++F FG+V E Sbjct: 158 KEHKLNGKVID-----PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE 212 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLD 643 + D+ TN+ RGF FI F E+ V +++ KK + + L ++ E+K A K+ Sbjct: 213 LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL--SKCEIKVAMSKEQYQQQQQWG 270 Query: 644 SKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSS 823 S+ + A G G S N G + Y + G+G G S Y G Y Y Y++ Sbjct: 271 SRGGFAGRARGRGGGPSQNWNQG-YSNYWNQGYGNY-GYNSQGY--GGY-GGYDYTGYNN 325 Query: 824 AYVPGDYS 847 Y GDYS Sbjct: 326 YYGYGDYS 333
>Q9Z130:HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like - Mus musculus| (Mouse) Length = 301 Score = 123 bits (309), Expect = 1e-27 Identities = 90/257 (35%), Positives = 127/257 (49%), Gaps = 2/257 (0%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +Q DG KMFIGGLS TS EY ++GE+VD I + T + RGFGF+ + D Sbjct: 25 QQDDG----KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA 80 Query: 263 AIVDRVIE-DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFS 436 A VD+V+E H +DGK ++ KR KG P KK+FVGGL +++ K++F Sbjct: 81 ASVDKVLELKEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFG 135 Query: 437 KFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 FG++ E+ D TN RGF FI + E+ V +LL + ++I + E+K A+PK+ Sbjct: 136 AFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI--GSGKCEIKVAQPKE 193 Query: 617 PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSS 796 K R A G G + G + GF Y Y G+Y+S Sbjct: 194 VYRQQQQ-QQKGGRGAAAGGRGG---ARGRGRGQGQNWNQGFN---NYYDQGY--GNYNS 244 Query: 797 AYVPGSYSSAYVPGDYS 847 AY S Y DY+ Sbjct: 245 AYGGDQNYSGYGGYDYT 261
>O14979:HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like - Homo sapiens| (Human) Length = 420 Score = 123 bits (309), Expect = 1e-27 Identities = 90/257 (35%), Positives = 127/257 (49%), Gaps = 2/257 (0%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +Q DG KMFIGGLS TS EY ++GE+VD I + T + RGFGF+ + D Sbjct: 144 QQDDG----KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA 199 Query: 263 AIVDRVIE-DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFS 436 A VD+V+E H +DGK ++ KR KG P KK+FVGGL +++ K++F Sbjct: 200 ASVDKVLELKEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPDTSEEQIKEYFG 254 Query: 437 KFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 FG++ E+ D TN RGF FI + E+ V +LL + ++I + E+K A+PK+ Sbjct: 255 AFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQI--GSGKCEIKVAQPKE 312 Query: 617 PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSS 796 K R A G G + G + GF Y Y G+Y+S Sbjct: 313 VYRQQQQ-QQKGGRGAAAGGRGG---TRGRGRGQGQNWNQGFN---NYYDQGY--GNYNS 363 Query: 797 AYVPGSYSSAYVPGDYS 847 AY S Y DY+ Sbjct: 364 AYGGDQNYSGYGGYDYT 380
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 122 bits (307), Expect = 2e-27 Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 8/261 (3%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 + + K+FIGGL+ QTS + +F +G + D V++ T++ R FGF+TYS+ Sbjct: 2 ENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEA 61 Query: 272 DRVIEDN-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKF 442 D + + H +DG VE+KR + + A P K KK+FVGGL + + + + FS+F Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQF 121 Query: 443 GKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP- 619 G V + EII D + + RGFGF+ F D+ K + I G +VEVKKA PK+ Sbjct: 122 GTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPI--QGHRVEVKKAVPKEDI 179 Query: 620 ---SNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSY 790 S S+ R G + + GG G+G G +AY G Sbjct: 180 YSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239 Query: 791 SSAYVPGSYSSAYVP-GDYSR 850 S+Y Y + + G YS+ Sbjct: 240 GSSYGGSDYGNGFGGFGSYSQ 260
>Q640A2:HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 297 Score = 122 bits (307), Expect = 2e-27 Identities = 91/276 (32%), Positives = 126/276 (45%), Gaps = 22/276 (7%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 QQD KMFIGGLS TS EY ++GE+VD I + T + RGFGF+ + D Sbjct: 22 QQD---EGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAV 78 Query: 266 IVDRVIE-DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSK 439 VD+V+E H +DGK ++ KR KG P KK+FVGGL +++ K +F Sbjct: 79 SVDKVLETKEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPETTEEQIKQYFGG 133 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 FG++ E+ D TN RGF F+ + E+ V +LL + ++I + E+K A+PK+ Sbjct: 134 FGEIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTG--KCEIKVAQPKEV 191 Query: 620 SNPPHSLDSKPRRSP-------------------YADGYDGFASSYNNGGRLAPYKSTGF 742 K R Y++ YD SY N G Y G+ Sbjct: 192 YRQQQQKQQKGGRGAATGRGGARGRGRGQGWNQGYSNYYDQNYGSYGNNG---SYADQGY 248 Query: 743 GTRPGSYS-SAYVPGSYSSAYVPGSYSSAYVPGDYS 847 Y S Y GSY Y+ Y DYS Sbjct: 249 NNSYSGYDYSGYNYGSY-------GYNQGYT--DYS 275
>P48810:RB87F_DROME Heterogeneous nuclear ribonucleoprotein 87F - Drosophila| melanogaster (Fruit fly) Length = 385 Score = 122 bits (305), Expect = 4e-27 Identities = 75/204 (36%), Positives = 109/204 (53%), Gaps = 3/204 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL +T+ K +F K+G IVD V+MK+ T++ RGFGFITYS ++D Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84 Query: 290 N-HVIDGKQVEIKRTIPKGA--APLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR +P+ +P KK+FVGGL ++ +++F FG++V Sbjct: 85 RPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSV 144 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D T + RGF FI FD VD+++ +K + I ++VKKA K+ + Sbjct: 145 NIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSI--KNKTLDVKKAIAKQDMD--RQG 200 Query: 641 DSKPRRSPYADGYDGFASSYNNGG 712 R P A G G GG Sbjct: 201 GGGGRGGPRAGGRGGQGDRGQGGG 224 Score = 64.3 bits (155), Expect = 1e-09 Identities = 33/89 (37%), Positives = 51/89 (57%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL DD K F K+G +V+ ++ D T RSRGFGFI + +D Sbjct: 24 RKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQN 83 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHS 637 + +KID G VE K+A P++ + P++ Sbjct: 84 ARPHKID--GRTVEPKRAVPRQEIDSPNA 110 Score = 62.0 bits (149), Expect = 5e-09 Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 GA+ K+F+GGL +EYF +G+IV I+ ++ T K RGF FI + D VD Sbjct: 111 GATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVD 170 Query: 275 RVI-EDNHVIDGKQVEIKRTIPK 340 ++I + H I K +++K+ I K Sbjct: 171 KIILQKTHSIKNKTLDVKKAIAK 193
>Q7ZX83:HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A - Xenopus laevis| (African clawed frog) Length = 293 Score = 121 bits (303), Expect = 7e-27 Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 31/281 (11%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 QQD KMFIGGLS TS EY ++GE++D I + T + RGFGF+ + D Sbjct: 22 QQD---EGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAV 78 Query: 266 IVDRVIEDN-HVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSK 439 VD+V+E N H +DGK ++ KR KG P KK+FVGGL +++ K +F Sbjct: 79 SVDKVLETNEHKLDGKLIDPKRAKALKGKEP-----PKKVFVGGLSPETTEEQIKQYFGG 133 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 FG++ E+ D TN RGF F+ + E+ V +LL + ++I + E+K A+PK+ Sbjct: 134 FGEIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTG--KCEIKAAQPKEV 191 Query: 620 SNPPHSLDSKPRRSP-------------------YADGYDGFASSYNNGGRLA------- 721 + R Y + YD Y N G Sbjct: 192 YRQQQQKQQRGGRGAVTGRGGTRGRGRGQGWNQGYNNYYDQNYGGYGNNGSYGDQDYNSY 251 Query: 722 ---PYKSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAYVP 835 Y +G PG + +Y A G++ + Y P Sbjct: 252 SGYDYSGYSYGYNPGYTEYSGQQSTYGKARGGGNHQNNYQP 292
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 120 bits (302), Expect = 9e-27 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + +F ++G + D V+M++ +T++ RGFGF+TY+ VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNA 74 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F ++GK+ Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP-SNPPHS 637 EI+ D + + RGF F+ FD +VD+++ +K + + NG EV+KA K+ ++ S Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTV--NGHNCEVRKALSKQEMASASSS 192 Query: 638 LDSKPRRSPYADGYDGFASSYNNGGRLAPYKST-GFGTRPG 757 + + G G +N GR + GFG G Sbjct: 193 QRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 233 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/98 (30%), Positives = 55/98 (56%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K +P + + +K+F+GGL D+ + F ++G + + ++ D +T RSRGFGF+ + Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S P Sbjct: 63 ATVEKVDAAMNARPHKVD--GRVVEPKRAVSREDSQRP 98
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 120 bits (301), Expect = 1e-26 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + +F ++G + D V+M++ +T++ RGFGF+TY+ VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F ++GK+ Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP-SNPPHS 637 EI+ D + + RGF F+ FD +VD+++ +K + + NG EV+KA K+ ++ S Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTV--NGHNCEVRKALSKQEMASASSS 192 Query: 638 LDSKPRRSPYADGYDGFASSYNNGGRLAPYKST-GFGTRPG 757 + + G G +N GR + GFG G Sbjct: 193 QRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 233 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/98 (30%), Positives = 55/98 (56%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K +P + + +K+F+GGL D+ + F ++G + + ++ D +T RSRGFGF+ + Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S P Sbjct: 63 ATVEEVDAAMNARPHKVD--GRVVEPKRAVSREDSQRP 98
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 120 bits (301), Expect = 1e-26 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + +F ++G + D V+M++ +T++ RGFGF+TY+ VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F ++GK+ Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP-SNPPHS 637 EI+ D + + RGF F+ FD +VD+++ +K + + NG EV+KA K+ ++ S Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTV--NGHNCEVRKALSKQEMASASSS 192 Query: 638 LDSKPRRSPYADGYDGFASSYNNGGRLAPYKST-GFGTRPG 757 + + G G +N GR + GFG G Sbjct: 193 QRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 233 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/98 (30%), Positives = 55/98 (56%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K +P + + +K+F+GGL D+ + F ++G + + ++ D +T RSRGFGF+ + Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S P Sbjct: 63 ATVEEVDAAMNARPHKVD--GRVVEPKRAVSREDSQRP 98
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 119 bits (299), Expect = 2e-26 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 5/221 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + +F ++G + D V+M++ +T++ RGFGF+TY+ VD + Sbjct: 15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F ++GK+ Sbjct: 75 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP-SNPPHS 637 EI+ D + + RGF F+ FD +VD+++ +K + + NG EV+KA K+ ++ S Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTV--NGHNCEVRKALCKQEMASASSS 192 Query: 638 LDSKPRRSPYADGYDGFASSYNNGGRLAPYKST-GFGTRPG 757 + + G G +N GR + GFG G Sbjct: 193 QRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRG 233 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/98 (30%), Positives = 55/98 (56%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K +P + + +K+F+GGL D+ + F ++G + + ++ D +T RSRGFGF+ + Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 62 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S P Sbjct: 63 ATVEEVDAAMNARPHKVD--GRVVEPKRAVSREDSQRP 98
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 119 bits (297), Expect = 4e-26 Identities = 61/172 (35%), Positives = 103/172 (59%), Gaps = 3/172 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + +F ++G + D V+M++ +T++ RGFGF+TY+ VD + Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 73 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + P KKIFVGG+ + +D+F ++GK+ Sbjct: 74 RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 133 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 EI+ D + + RGF F+ FD +VD+++ +K + + NG EV+KA K+ Sbjct: 134 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTV--NGHNCEVRKALSKQ 183 Score = 60.1 bits (144), Expect = 2e-08 Identities = 30/98 (30%), Positives = 55/98 (56%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K +P + + +K+F+GGL D+ + F ++G + + ++ D +T RSRGFGF+ + Sbjct: 2 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 61 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S P Sbjct: 62 ATVEEVDAAMNARPHKVD--GRVVEPKRAVSREDSQRP 97
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 118 bits (295), Expect = 6e-26 Identities = 61/172 (35%), Positives = 104/172 (60%), Gaps = 3/172 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + ++ ++G++ D V+M++ +++ RGFGF+T+S VD + Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR + + A P KK+FVGG+ + +++F ++GK+ Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIEST 129 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 EII D + + RGFGF+ F+ VD+++ +K + I NG EV+KA K+ Sbjct: 130 EIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTI--NGHNAEVRKALSKQ 179 Score = 57.4 bits (137), Expect = 1e-07 Identities = 27/87 (31%), Positives = 52/87 (59%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL ++ ++F+ ++G++ + ++ D ++ RSRGFGF+ F VD ++ Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS 68 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + + ID G VE K+A ++ S P Sbjct: 69 ARPHTID--GRVVEPKRAVAREESAKP 93
>Q6NU14:HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-like-B - Xenopus laevis| (African clawed frog) Length = 291 Score = 118 bits (295), Expect = 6e-26 Identities = 84/258 (32%), Positives = 124/258 (48%), Gaps = 11/258 (4%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 +KMFIGGLS TS EY ++GE++D I + T + RGFGF+ + D VD+V+E Sbjct: 34 SKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLE 93 Query: 287 -DNHVIDGKQVEIKRT-IPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DGK ++ KR +G P KK+FVGGL +++ K +F FG++ Sbjct: 94 TKEHKLDGKLIDPKRAKALQGKEP-----PKKVFVGGLSPETTEEQIKQYFGGFGEIENI 148 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 E+ D TN RGF F+ + E+ V +LL + ++I + E+K A+PK+ Sbjct: 149 ELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTG--KCEIKAAQPKEVYRQQQQK 206 Query: 641 DSK---------PRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYS 793 K R Y++ YD +Y G Y G+G G S Y G+Y Sbjct: 207 QQKGGRGGTRGRGRGQGYSNYYD---QNYGGYGNNDSYGDQGYG---GYDYSGYNYGNY- 259 Query: 794 SAYVPGSYSSAYVPGDYS 847 Y+ Y DYS Sbjct: 260 ------GYNQGYT--DYS 269
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus| laevis (African clawed frog) Length = 346 Score = 117 bits (293), Expect = 1e-25 Identities = 62/172 (36%), Positives = 102/172 (59%), Gaps = 3/172 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + + Y+ ++G + D V+M++ +++ RGFGF+T+S VD + Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H IDG+ VE KR + + A P KK+FVGG+ + +++F ++GK+ Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIDSI 129 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 EII D + + RGF F+ FD VD+++ +K + I NG EV+KA K+ Sbjct: 130 EIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTI--NGHNAEVRKALSKQ 179 Score = 56.6 bits (135), Expect = 2e-07 Identities = 27/87 (31%), Positives = 51/87 (58%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 +K+F+GGL ++ ++++ ++G + + ++ D ++ RSRGFGF+ F VD +A Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + + ID G VE K+A ++ S P Sbjct: 69 TRPHTID--GRVVEPKRAVAREESAKP 93
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 115 bits (288), Expect = 4e-25 Identities = 69/222 (31%), Positives = 120/222 (54%), Gaps = 8/222 (3%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGLS +T+ + +E+F ++G + D V+M++ ++++ RGFGF+TY VD + Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74 Query: 290 N-HVIDGKQVEIKRTIPK--GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 H +DG+ VE KR + + + P KKIFVGG+ +D +++F ++GK+ Sbjct: 75 RPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVI 134 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 EI+ D + + RGF F+ F+ +VD+++ +K + ++ + +Q V+KA K+ Sbjct: 135 EIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQ--VRKALSKQEMASVSGS 192 Query: 641 DSKPRRSPYADGYDGFASSYNNGGRLAPYKST-----GFGTR 751 + S GF + N GGR + GFG R Sbjct: 193 QRERGGSGNYGSRGGFGND-NFGGRGGNFGGNRGGGGGFGNR 233 Score = 60.5 bits (145), Expect = 1e-08 Identities = 30/98 (30%), Positives = 57/98 (58%) Frame = +2 Query: 338 KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 K AP + + +K+F+GGL D+ ++ F ++G + + ++ D ++ RSRGFGF+ + Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62 Query: 518 DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 + VD + + +K+D G VE K+A ++ S+ P Sbjct: 63 LSTDEVDAAMTARPHKVD--GRVVEPKRAVSREDSSRP 98
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 98.2 bits (243), Expect = 6e-20 Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 AK+F+G L F G + A ++ R T + RGFGF+T S ++ +E Sbjct: 55 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 114 Query: 287 --DNHVIDGKQVEIKRTIPKGA---APLKDFKTK-KIFVGGLPTALRDDEFKDFFSKFGK 448 + + +DG+Q+ + + P+G+ AP DF+ +++VG LP + + FS+ GK Sbjct: 115 LLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGK 174 Query: 449 VVEHEIICDHSTNRSRGFGFIVFDAEKTV-DELLAKKGNKIDLNGTQVEVKKAEPKK 616 VV ++ D T RSRGFGF+ +E V D + A G +D +V V + P++ Sbjct: 175 VVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 231 Score = 48.5 bits (114), Expect = 6e-05 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D + ++++G L ++ F ++G++V A ++ +R T + RGFGF+T S + V Sbjct: 144 DFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEV 203 Query: 272 DRVIE--DNHVIDGKQVEI 322 + I D +DG+ V + Sbjct: 204 NDAIAALDGQTLDGRAVRV 222
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 94.7 bits (234), Expect = 7e-19 Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 7/192 (3%) Frame = +2 Query: 71 SGEMKQ-QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 +GE ++ Q+ + AK+F+G L + F + G + A ++ R T + RGFGF+ Sbjct: 84 AGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFV 143 Query: 248 TYSDPAIVDRVIE--DNHVIDGKQVEIKRTIPKGAAPLKDFKT----KKIFVGGLPTALR 409 T S D+ +E + ++G+ + + + P+G+ P + +T +I+VG +P + Sbjct: 144 TMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDID 203 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQV 589 D + FS+ GKVV ++ D + RSRGFGF+ +E + E +A + L+G + Sbjct: 204 DARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQ-TLDGRTI 262 Query: 590 EVKKAEPKKPSN 625 V AE + N Sbjct: 263 RVNAAEERPRRN 274
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 89.0 bits (219), Expect = 4e-17 Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 E + Q+ AK+F+G L F + G + A ++ R T + RGFGF+T S Sbjct: 126 EEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMS 185 Query: 257 DPAIVDRVIE--DNHVIDGKQVEIKRTIPKGAAPLKDFKT----KKIFVGGLPTALRDDE 418 ++ +E + + ++G+ + + + +G P + +T +I+VG +P + D Sbjct: 186 TVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDAR 245 Query: 419 FKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVK 598 + FS+ GKVV ++ D T RSRGFGF+ +E + + +A + L+G + V Sbjct: 246 LEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQ-SLDGRTIRVN 304 Query: 599 KAEPKKPSN 625 AE + N Sbjct: 305 VAEDRSRRN 313
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 87.8 bits (216), Expect = 9e-17 Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 7/178 (3%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 AK+F+G L+ + F + G + A ++ R T + RGFGF+T S + +E Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209 Query: 287 --DNHVIDGKQVEIKRTIPKGAAPLKDFKTK----KIFVGGLPTALRDDEFKDFFSKFGK 448 + + ++G+ + + + P+G+ P + + +++VG LP + + + FS+ GK Sbjct: 210 KFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGK 269 Query: 449 VVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 VVE ++ D T RSRGFGF+ D ++ + + A G +L G + V AE + P Sbjct: 270 VVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQ--NLEGRAIRVNVAEERPP 325 Score = 51.2 bits (121), Expect = 9e-06 Identities = 24/72 (33%), Positives = 44/72 (61%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI 283 A ++++G L G ++ F ++G++V+A ++ +R T + RGFGF+T SD VD + Sbjct: 243 AFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSD---VDELN 299 Query: 284 EDNHVIDGKQVE 319 E +DG+ +E Sbjct: 300 EAISALDGQNLE 311
>Q13148:TADBP_HUMAN TAR DNA-binding protein 43 - Homo sapiens (Human)| Length = 414 Score = 87.4 bits (215), Expect = 1e-16 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 11/234 (4%) Frame = +2 Query: 77 EMKQQDGASAAK----------MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQK 226 +M + D +SA K + + GL +T+ KEYF +GE++ + K+ T Sbjct: 84 KMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGH 143 Query: 227 PRGFGFITYSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTAL 406 +GFGF+ +++ +V+ H+IDG+ + K K + + +++K+FVG + Sbjct: 144 SKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSQD-EPLRSRKVFVGRCTEDM 202 Query: 407 RDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ 586 +DE ++FFS++G V++ I R F F+ F ++ L G + + G Sbjct: 203 TEDELREFFSQYGDVMDVFI-----PKPFRAFAFVTFADDQIAQSLC---GEDLIIKGIS 254 Query: 587 VEVKKAEPKKPSNPPHSLDSKPRRSPYADG-YDGFASSYNNGGRLAPYKSTGFG 745 V + AEPK SN + +P G GF +S G L + + G Sbjct: 255 VHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGSNMG 308 Score = 46.2 bits (108), Expect = 3e-04 Identities = 23/90 (25%), Positives = 44/90 (48%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + + Q + + K+F+G + + +E+F +YG+++D I K R F F+T Sbjct: 179 NSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPF-----RAFAFVT 233 Query: 251 YSDPAIVDRVIEDNHVIDGKQVEIKRTIPK 340 ++D I + ++ +I G V I PK Sbjct: 234 FADDQIAQSLCGEDLIIKGISVHISNAEPK 263
>Q921F2:TADBP_MOUSE TAR DNA-binding protein 43 - Mus musculus (Mouse)| Length = 414 Score = 85.5 bits (210), Expect = 4e-16 Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 13/243 (5%) Frame = +2 Query: 77 EMKQQDGASAAK----------MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQK 226 +M + D +SA K + + GL +T+ K+YF +GE++ + K+ T Sbjct: 84 KMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGH 143 Query: 227 PRGFGFITYSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTAL 406 +GFGF+ +++ +V+ H+IDG+ + K K +P + +++K+FVG + Sbjct: 144 SKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK-QSPDEPLRSRKVFVGRCTEDM 202 Query: 407 RDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ 586 +E + FF ++G+VV+ I R F F+ F +K L G + + G Sbjct: 203 TAEELQQFFCQYGEVVDVFI-----PKPFRAFAFVTFADDKVAQSLC---GEDLIIKGIS 254 Query: 587 VEVKKAEPKKPSNPPHSLDSKPRRSPYADG-YDGFASSYNNGGRLAPYK--STGFGTRPG 757 V + AEPK SN + +P G GF +S G L + + G G G Sbjct: 255 VHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGGNMGGGMNFG 314 Query: 758 SYS 766 ++S Sbjct: 315 AFS 317
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 83.6 bits (205), Expect = 2e-15 Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 13/195 (6%) Frame = +2 Query: 74 GEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY 253 G ++++ + K+F+G L E F + G + ++ ++ T + RGFGF+T Sbjct: 76 GVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTM 135 Query: 254 SDPAIVDRVIE--DNHVIDGKQVEIKRTIPKGAAPLKDFK-----------TKKIFVGGL 394 S V+ + + + +DG+ + + P F+ + +++VG L Sbjct: 136 SSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNL 195 Query: 395 PTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDL 574 + D + FS+ GKVV+ +++ D + RSRGFGF+ + + + V+ + + + +DL Sbjct: 196 AWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI-ESLDGVDL 254 Query: 575 NGTQVEVKKAEPKKP 619 NG + V AE + P Sbjct: 255 NGRAIRVSPAEARPP 269 Score = 48.1 bits (113), Expect = 8e-05 Identities = 24/88 (27%), Positives = 46/88 (52%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S+ ++++G L+ + F + G++VDA ++ +R + + RGFGF+TYS V+ Sbjct: 186 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 245 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLKDF 364 IE +D I+ + + P + F Sbjct: 246 IESLDGVDLNGRAIRVSPAEARPPRRQF 273
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 82.8 bits (203), Expect = 3e-15 Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + FK FG G+I +++++ T + G+GF+ YSDP D+ Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEP---KKPSNP 628 I+ D +T SRG GFI FD K ++ A KG LNG Q + AEP K +NP Sbjct: 154 SRILLDQATGVSRGVGFIRFD--KRIEAEEAIKG----LNG-QKPLGAAEPITVKFANNP 206 Score = 43.5 bits (101), Expect = 0.002 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +2 Query: 359 DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAE 526 D KT I V LP + DEFK F G + +++ D T +S G+GF+ + DA+ Sbjct: 36 DSKTNLI-VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 94 Query: 527 KTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 K ++ L N + L ++V A P S Sbjct: 95 KAINTL-----NGLKLQTKTIKVSYARPSSAS 121 Score = 34.7 bits (78), Expect = 0.88 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAK 553 IFV L + F FG V ++I D +TN+ +GFGF+ + ++ + + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 554 KGNKIDLNGTQVEVKKAEPKK 616 G ++ QV K ++ K Sbjct: 346 NGYRLGERVLQVSFKTSKQHK 366 Score = 34.3 bits (77), Expect = 1.1 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ LS + + FG +G + + ++++ T K +GFGF+T ++ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 334
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 82.0 bits (201), Expect = 5e-15 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 25/204 (12%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 K+Q ++ K+F+G L + F G + ++ ++ T + RGFGF+T S Sbjct: 83 KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142 Query: 263 AIVDRVIE--DNHVIDGKQVEI-------KRTIPKGAAPLKDFKTK-------------- 373 + V+ + + + +DG+ + + KR P F + Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202 Query: 374 --KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 +++VG L + D + FS+ GKVVE +I D + RS+GFGF+ +D+ + V + Sbjct: 203 GNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAI 262 Query: 548 AKKGNKIDLNGTQVEVKKAEPKKP 619 K + DL+G Q+ V +AE + P Sbjct: 263 -KSLDGADLDGRQIRVSEAEARPP 285
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 81.6 bits (200), Expect = 6e-15 Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 4/180 (2%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + FK FG G+I +++++ T + G+GF+ YSDP D+ Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEP---KKPSNP 628 I+ D T SRG GFI FD K ++ A KG LNG Q + AEP K +NP Sbjct: 154 SRILVDQVTGVSRGVGFIRFD--KRIEAEEAIKG----LNG-QKPLGAAEPITVKFANNP 206 Score = 43.5 bits (101), Expect = 0.002 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +2 Query: 359 DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAE 526 D KT I V LP + DEFK F G + +++ D T +S G+GF+ + DA+ Sbjct: 36 DSKTNLI-VNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDAD 94 Query: 527 KTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 K ++ L N + L ++V A P S Sbjct: 95 KAINTL-----NGLKLQTKTIKVSYARPSSAS 121 Score = 34.7 bits (78), Expect = 0.88 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAK 553 IFV L + F FG V ++I D +TN+ +GFGF+ + ++ + + Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 554 KGNKIDLNGTQVEVKKAEPKK 616 G ++ QV K ++ K Sbjct: 346 NGYRLGERVLQVSFKTSKQHK 366 Score = 34.3 bits (77), Expect = 1.1 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ LS + + FG +G + + ++++ T K +GFGF+T ++ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTN 334
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 80.9 bits (198), Expect = 1e-14 Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 19/201 (9%) Frame = +2 Query: 74 GEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY 253 G ++++ + K+F+G L E F + G + ++ ++ T + RGFGF+T Sbjct: 76 GVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTM 135 Query: 254 SDPAIVDRVIE--DNHVIDGKQVEIKRTIPKGAAPLKDFK-----------------TKK 376 S V+ + + + +DG+ + + P F+ + + Sbjct: 136 SSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNR 195 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 ++VG L + D + FS+ GKVV+ +++ D + RSRGFGF+ + + + V+ + + Sbjct: 196 VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAI-ES 254 Query: 557 GNKIDLNGTQVEVKKAEPKKP 619 + +DLNG + V AE + P Sbjct: 255 LDGVDLNGRAIRVSPAEARPP 275 Score = 48.1 bits (113), Expect = 8e-05 Identities = 24/88 (27%), Positives = 46/88 (52%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S+ ++++G L+ + F + G++VDA ++ +R + + RGFGF+TYS V+ Sbjct: 192 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 251 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLKDF 364 IE +D I+ + + P + F Sbjct: 252 IESLDGVDLNGRAIRVSPAEARPPRRQF 279
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 76.6 bits (187), Expect = 2e-13 Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 12/183 (6%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 DG A ++++G + R + + ++G I A +M ++++ + R FGF+T Sbjct: 79 DGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDA 138 Query: 272 DRVIE--DNHVIDGKQVEIKRT--------IPKGAAPLKDFKTK--KIFVGGLPTALRDD 415 + VIE ++ I G+++++ T I A F K+++G L + ++ Sbjct: 139 NAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNE 198 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 KDFFS+ GKV+ ++ T++S GFGF+ F +E+ V+ + N + L G ++ V Sbjct: 199 LLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSV-LEGQKIRV 257 Query: 596 KKA 604 KA Sbjct: 258 NKA 260
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 76.3 bits (186), Expect = 3e-13 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + F+ FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 154 SRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183 Score = 42.7 bits (99), Expect = 0.003 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Frame = +2 Query: 347 APLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF--- 517 A D KT I V LP + +EF+ F G++ +++ D T +S G+GF+ + Sbjct: 32 AATDDSKTNLI-VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90 Query: 518 -DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 DAEK ++ L N + L ++V A P S Sbjct: 91 KDAEKAINTL-----NGLRLQTKTIKVSYARPSSAS 121 Score = 33.9 bits (76), Expect = 1.5 Identities = 13/49 (26%), Positives = 29/49 (59%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ LS + + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 340 Score = 31.6 bits (70), Expect = 7.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 336
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 76.3 bits (186), Expect = 3e-13 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + F+ FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 109 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 165 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 166 SRILVDQVTGVSRGVGFIRFDKRIEAEEAI 195 Score = 42.7 bits (99), Expect = 0.003 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Frame = +2 Query: 347 APLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF--- 517 A D KT I V LP + +EF+ F G++ +++ D T +S G+GF+ + Sbjct: 44 AATDDSKTNLI-VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 102 Query: 518 -DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 DAEK ++ L N + L ++V A P S Sbjct: 103 KDAEKAINTL-----NGLRLQTKTIKVSYARPSSAS 133 Score = 33.9 bits (76), Expect = 1.5 Identities = 13/49 (26%), Positives = 29/49 (59%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ LS + + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 352 Score = 31.6 bits (70), Expect = 7.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 348
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 76.3 bits (186), Expect = 3e-13 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + F+ FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 104 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 160 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 161 SRILVDQVTGVSRGVGFIRFDKRIEAEEAI 190 Score = 42.7 bits (99), Expect = 0.003 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Frame = +2 Query: 347 APLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF--- 517 A D KT I V LP + +EF+ F G++ +++ D T +S G+GF+ + Sbjct: 39 ATTDDSKTNLI-VNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 97 Query: 518 -DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 DAEK ++ L N + L ++V A P S Sbjct: 98 KDAEKAINTL-----NGLRLQTKTIKVSYARPSSAS 128 Score = 33.9 bits (76), Expect = 1.5 Identities = 13/49 (26%), Positives = 29/49 (59%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ LS + + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTN 347 Score = 31.6 bits (70), Expect = 7.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 343
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 75.1 bits (183), Expect = 6e-13 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + K FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 154 SRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 33.1 bits (74), Expect = 2.6 Identities = 12/49 (24%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ L+ + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326 Score = 32.7 bits (73), Expect = 3.3 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 322
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 75.1 bits (183), Expect = 6e-13 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + K FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 154 SRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 33.1 bits (74), Expect = 2.6 Identities = 12/49 (24%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ L+ + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 327 Score = 32.7 bits (73), Expect = 3.3 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 323
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 75.1 bits (183), Expect = 6e-13 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S + + L + + K FG GEI +++++ T + G+GF+ Y DP ++ Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 I + ++G +++ K A P + ++V GLP + E + FS++G+++ Sbjct: 97 I---NTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIIT 153 Query: 458 HEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 I+ D T SRG GFI FD +E + Sbjct: 154 SRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Score = 33.1 bits (74), Expect = 2.6 Identities = 12/49 (24%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ L+ + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326 Score = 32.7 bits (73), Expect = 3.3 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 322
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 73.9 bits (180), Expect = 1e-12 Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 E + + ++++G L + E F + G + + I+ +R T + RGF F+T Sbjct: 104 ERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMG 163 Query: 257 DPAIVDRVIEDNHVIDGKQV---EIKRTIPK----GAAPLKDFKTK-----------KIF 382 V+ E + DG QV +K P+ G + K + K++ Sbjct: 164 S---VEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLY 220 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V L AL +D F+ + ++I D S+ RSRGFGFI F + + ++ L N Sbjct: 221 VANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM-N 279 Query: 563 KIDLNGTQVEVKKAEPKKPSNPPHSLDSKP 652 +++L G + + A K P + P +++ P Sbjct: 280 EVELEGRPLRLNVAGQKAPVSSPPVVETSP 309 Score = 46.2 bits (108), Expect = 3e-04 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 +++VG LP ++ + + F++ G V EI+ D T+RSRGF F+ + + E + Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 554 KGNKIDLNGTQV---EVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASS 697 +G+QV VK P+ P + S RS Y GF S Sbjct: 175 ------FDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRST----YQGFVDS 215
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 73.2 bits (178), Expect = 2e-12 Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 1/141 (0%) Frame = +2 Query: 128 LSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNHVIDG 307 L + + K FG GEI +++++ T + G+GF+ Y DP ++ I + ++G Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAI---NTLNG 102 Query: 308 KQVEIKRTIPKGAAPLK-DFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHST 484 +++ K A P + ++V GLP + E + FS++G+++ I+ D T Sbjct: 103 LRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVT 162 Query: 485 NRSRGFGFIVFDAEKTVDELL 547 SRG GFI FD +E + Sbjct: 163 GISRGVGFIRFDKRIEAEEAI 183 Score = 35.4 bits (80), Expect = 0.51 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++ GL + + ++ F +YG I+ + I+ ++ T RG GFI + D+ IE Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRF------DKRIE 178 Query: 287 DNHVIDG 307 I G Sbjct: 179 AEEAIKG 185 Score = 33.1 bits (74), Expect = 2.6 Identities = 12/49 (24%), Positives = 28/49 (57%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 +F+ L+ + FG +G + + ++++ +T K +GFGF+T ++ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTN 326 Score = 32.7 bits (73), Expect = 3.3 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFI 511 IFV L + F FG V ++I D +TN+ +GFGF+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFV 322
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 71.6 bits (174), Expect = 6e-12 Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 36/204 (17%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 K+F+G L F + G + ++ ++ T + RGFGF+T S V+ + Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147 Query: 287 -DNHVIDGKQVEIKRTIPKGAAPLKDFKTK------------------------------ 373 + + IDG+ + + G AP K + Sbjct: 148 FNGYEIDGRAIRVNA----GPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSV 203 Query: 374 ----KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDE 541 +++VG L + D K+ FS+ G VV+ +++ D + RSRGFGF+ + + K V++ Sbjct: 204 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVND 263 Query: 542 LLAKKGNKIDLNGTQVEVKKAEPK 613 + N +DL+G + V AE + Sbjct: 264 AIDSL-NGVDLDGRSIRVSAAEER 286 Score = 50.1 bits (118), Expect = 2e-05 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+FVG LP ++ F + G V E+I D T RSRGFGF+ ++ V E + Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEV-EAAEQ 146 Query: 554 KGNKIDLNGTQVEVKKA-EPKKPSNPPHSLDSKPRRSPYADGYDGFAS 694 + N +++G + V P K N + S Y G DG +S Sbjct: 147 QFNGYEIDGRAIRVNAGPAPAKRENSSFG-GGRGGNSSYGGGRDGNSS 193 Score = 49.3 bits (116), Expect = 3e-05 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S+ ++++G LS KE F + G +VDA ++ +R + + RGFGF+TYS V+ Sbjct: 205 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264 Query: 281 IED-NHV-IDGKQVEI 322 I+ N V +DG+ + + Sbjct: 265 IDSLNGVDLDGRSIRV 280
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 71.6 bits (174), Expect = 6e-12 Identities = 44/130 (33%), Positives = 60/130 (46%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL D +D F+ FG VV+ ++I D T RSRGFGF+ F+ E +++ Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 K +LNG + V NP + S PR GY G Y GG Sbjct: 96 MDGK-ELNGRHIRV---------NPANDRPSAPRAYGGGGGYSGGGGGYGGGG------- 138 Query: 734 TGFGTRPGSY 763 G+G G Y Sbjct: 139 GGYGGGGGGY 148 Score = 57.4 bits (137), Expect = 1e-07 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 2/85 (2%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVI 283 + K+FIGGLS T + ++ F +G++VDA ++ +R T + RGFGF+ ++D I Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93 Query: 284 E--DNHVIDGKQVEIKRTIPKGAAP 352 D ++G+ + + + +AP Sbjct: 94 SEMDGKELNGRHIRVNPANDRPSAP 118
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 71.6 bits (174), Expect = 6e-12 Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 20/208 (9%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D +S K+F+G + R + + YF ++G +++ ++K++ T + +G F+ Y+ Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLK----DFKTK-------KIFVGGLPTALRDDE 418 DR I H Q+ T+P G P++ D + + K+FVG L + E Sbjct: 175 DRAIRALH----NQI----TLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKE 226 Query: 419 FKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ--VE 592 ++ F +FG V + ++ D +SRG GF+ + +++T + + G + Sbjct: 227 VEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLI 285 Query: 593 VKKAEPKKPS-------NPPHSLDSKPR 655 V+ AEPK+P PP L S PR Sbjct: 286 VRFAEPKRPKPGESREMAPPVGLGSGPR 313
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 70.5 bits (171), Expect = 1e-11 Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 3/174 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 + + L + + + F GE+ A +++++ G+GF+ Y +R I Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI--- 78 Query: 293 HVIDGKQVEIKRTIPKGAAPLKD-FKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + ++G +++ K A P + K +++ GLP + + +D FS+FG+++ ++ Sbjct: 79 NTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL 138 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAK-KGNKIDLNGTQVEVK-KAEPKKPSN 625 D +T SRG FI FD +E + G+K + + VK A P + N Sbjct: 139 VDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKN 192 Score = 37.0 bits (84), Expect = 0.18 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 SG + +S +FI L + G + FG +G + + ++++ +T K +GFGF+T Sbjct: 232 SGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 291 Query: 251 YSD 259 ++ Sbjct: 292 MTN 294 Score = 32.0 bits (71), Expect = 5.7 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAK 553 IF+ L + F FG V ++I D +TN+ +GFGF+ + E+ + + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 554 KGNKIDLNGTQVEVKKAEPKK 616 G ++ QV K + K Sbjct: 306 NGYRLGDKILQVSFKTNKSHK 326
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 70.1 bits (170), Expect = 2e-11 Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 36/204 (17%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 K+F+G L F + G + ++ ++ + + RGFGF+T S V+ + Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQ 148 Query: 287 -DNHVIDGKQVEIKRTIPKGAAPLKDFKTK------------------------------ 373 + + IDG+ + + G AP K + Sbjct: 149 FNGYEIDGRAIRVNA----GPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSV 204 Query: 374 ----KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDE 541 +++VG L + D K+ FS+ G VV+ +++ D + RSRGFGF+ + + K V++ Sbjct: 205 DSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVND 264 Query: 542 LLAKKGNKIDLNGTQVEVKKAEPK 613 + N IDL+G + V AE + Sbjct: 265 AIDSL-NGIDLDGRSIRVSAAEER 287 Score = 49.3 bits (116), Expect = 3e-05 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S+ ++++G LS KE F + G +VDA ++ +R + + RGFGF+TYS V+ Sbjct: 206 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 265 Query: 281 IEDNHVI--DGKQVEI 322 I+ + I DG+ + + Sbjct: 266 IDSLNGIDLDGRSIRV 281 Score = 48.1 bits (113), Expect = 8e-05 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+FVG LP ++ F + G V E+I D + RSRGFGF+ ++ V E + Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEV-EAAEQ 147 Query: 554 KGNKIDLNGTQVEVKKA-EPKKPSNPPHSLDSKPRRSPYADGYDGFAS 694 + N +++G + V P K N + S Y G DG +S Sbjct: 148 QFNGYEIDGRAIRVNAGPAPAKRENSSFG-GGRGGNSSYGGGRDGNSS 194
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 70.1 bits (170), Expect = 2e-11 Identities = 46/135 (34%), Positives = 60/135 (44%), Gaps = 1/135 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLA 550 K+FVGGL + +D FS FG + E ++ D T RSRGFGFI F + E D + A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYK 730 G +D G Q+ V A K R + G SY+ GG Y Sbjct: 67 MNGESLD--GRQIRVDHA-------------GKSARGSRGGAFGGRGRSYSRGGGDQGYG 111 Query: 731 STGFGTRPGSYSSAY 775 S + +RPG Y Y Sbjct: 112 SGRYDSRPGGYGYGY 126 Score = 59.7 bits (143), Expect = 3e-08 Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 K+F+GGL+ T +++F +G I + V++K+R TQ+ RGFGFIT+++P + Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 287 -DNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGESLDGRQIRV 79
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 70.1 bits (170), Expect = 2e-11 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 8/160 (5%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+FVGGL + + FSK+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY- 727 G +D G Q+ V +A + + G G ++ GG Y Sbjct: 67 MNGKSVD--GRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYG 124 Query: 728 ------KSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 +S G+G YSS G YS GSY +Y Sbjct: 125 GNRFESRSGGYGGSRDYYSSRSQSGGYSDRSSGGSYRDSY 164 Score = 62.4 bits (150), Expect = 4e-09 Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+F+GGLS T+ + ++ F KYG+I + V++K+R TQ+ RGFGF+T+ D A + Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGKSVDGRQIRV 79
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 70.1 bits (170), Expect = 2e-11 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 8/160 (5%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+FVGGL + + FSK+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY- 727 G +D G Q+ V +A + + G G ++ GG Y Sbjct: 67 MNGKSVD--GRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYG 124 Query: 728 ------KSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 +S G+G YSS G YS GSY +Y Sbjct: 125 GNRFESRSGGYGGSRDYYSSRSQSGGYSDRSSGGSYRDSY 164 Score = 62.4 bits (150), Expect = 4e-09 Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+F+GGLS T+ + ++ F KYG+I + V++K+R TQ+ RGFGF+T+ D A + Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGKSVDGRQIRV 79
>P17132:HNRPC_RAT Heterogeneous nuclear ribonucleoprotein C - Rattus norvegicus (Rat)| Length = 158 Score = 68.9 bits (167), Expect = 4e-11 Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 7/161 (4%) Frame = +2 Query: 269 VDRVIEDN-HVIDGKQVEIKRTIPKGAAPLKDFK-TKKIFVGGLPTALRDDEFKDFFSKF 442 VD+V++ H ++GK ++ PK A +K + KKIFVGGL +++ +++F F Sbjct: 3 VDKVMDQKEHKLNGKVID-----PKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGF 57 Query: 443 GKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS 622 G+V E+ D+ TN+ RGF FI F E+ V +++ KK + + L ++ E+K A K+ Sbjct: 58 GEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL--SKCEIKVAMSKEQY 115 Query: 623 NPPHSLDSK-----PRRSPYADGYDGFASSYNNGGRLAPYK 730 S+ R D G+ GG YK Sbjct: 116 QQQQQWGSRGGFAGRARGRGGDQQSGYGKVSRRGGHQNSYK 156 Score = 52.8 bits (125), Expect = 3e-06 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+F+GGLS T +EYFG +GE+ + + T K RGF FIT+ + V +++E Sbjct: 35 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 94 Query: 290 N-HVIDGKQVEIKRTIPK 340 H + + EIK + K Sbjct: 95 KYHNVGLSKCEIKVAMSK 112
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 68.9 bits (167), Expect = 4e-11 Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 2/232 (0%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 + + L + + + F GE+ A +++++ G+GF+ Y +R I Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS-- 79 Query: 293 HVIDGKQVEIKRTIPKGAAPLKD-FKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 ++G +++ K A P + K +++ GLP + + +D FS+FG+++ ++ Sbjct: 80 -TLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL 138 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAK-KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 D +T SRG FI FD +E + G+K + + VK A +NP + + Sbjct: 139 VDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFA-----ANPNQNKNM 193 Query: 647 KPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAY 802 Y F ++ + + G G S VPG+ SS + Sbjct: 194 ALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSG-ISGVNVPGNASSGW 244 Score = 37.0 bits (84), Expect = 0.18 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 SG + +S +FI L + G + FG +G + + ++++ +T K +GFGF+T Sbjct: 232 SGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVT 291 Query: 251 YSD 259 ++ Sbjct: 292 MTN 294 Score = 32.3 bits (72), Expect = 4.4 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAK 553 IF+ L + F FG V ++I D +TN+ +GFGF+ + E++ + + Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 554 KGNKIDLNGTQVEVKKAEPKK 616 G ++ QV K + K Sbjct: 306 NGYRLGDKILQVSFKTNKSHK 326
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 68.6 bits (166), Expect = 5e-11 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A D + FS++G+V++ +II D T RSRGFGF+ F EK++ + + + Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI-E 67 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSL-DSKPRRSPYADGYDGFASSYNNGGRLAPYK 730 N DL+G + V +A+ + RS GY G Y GGR Y Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGGGREGGYS 127 Query: 731 STGFGTRPGSYSS 769 G G YSS Sbjct: 128 GGG-----GGYSS 135 Score = 55.1 bits (131), Expect = 6e-07 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ T + F +YGE++D+ I+ +R T + RGFGF+T+ D + IE Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 287 -DNHVIDGKQVEIKRTIPKGA 346 + +DG+ + + +G+ Sbjct: 69 MNGQDLDGRSITVNEAQSRGS 89
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 68.6 bits (166), Expect = 5e-11 Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 6/154 (3%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+F+GGL +D + F+K+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDG----FASSYNNGGRL 718 G +D G Q+ V +A S RR Y G G F GG Sbjct: 66 MNGKSVD--GRQIRVDQA----------GKSSGERRGGYRGGSSGGRGFFRGGRGRGGGD 113 Query: 719 APYKSTGFGTRPGSY-SSAYVPGSYSSAYVPGSY 817 Y S+ F R G Y S+ Y S GSY Sbjct: 114 RGYGSSRFDNRSGGYGGSSGSRDYYGSGRSQGSY 147 Score = 58.5 bits (140), Expect = 6e-08 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+FIGGL+ +T+ ++ F KYG I + V++K+R T++ RGFGF+T+ D A + Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 66 MNGKSVDGRQIRV 78
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 68.2 bits (165), Expect = 7e-11 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 16/168 (9%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 +++ L+ T+ K FG+YG+I AV+MK+ K +GFGF+ + + R +E Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESL 275 Query: 287 DNHVIDGKQVEIKRTIPKGAAP----------LKD----FKTKKIFVGGLPTALRDDEFK 424 + H D K+ + R K LK+ F++ ++V L ++ D++ K Sbjct: 276 NGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLK 335 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + FS FG V +++ D S+G GF+ F + E +++ K+ Sbjct: 336 EIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEATEAMSQLSGKM 382 Score = 59.7 bits (143), Expect = 3e-08 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 8/166 (4%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + A +FI L + F +G IV + + Q +G+GF+ Y++ + Sbjct: 121 SGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQS-KGYGFVQYANEESAQK 179 Query: 278 VIE--DNHVIDGKQVEIKRTIPKGAAPLKDFKTK--KIFVGGLPTALRDDEFKDFFSKFG 445 IE + +++ KQV + + + KTK ++V L + DD+ K+ F ++G Sbjct: 180 AIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYG 239 Query: 446 KVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 K+ ++ D +S+GFGF+ F DA + V+ L G+K D Sbjct: 240 KITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESL---NGHKFD 281 Score = 58.2 bits (139), Expect = 7e-08 Identities = 37/161 (22%), Positives = 79/161 (49%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +++G L + + FG+ G +V + ++ T++ G+G++ +++P R I++ Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 293 HVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIIC 472 + I I+ ++ IF+ L ++ D FS FG +V ++ Sbjct: 98 NYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAV 157 Query: 473 DHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 D S+ +S+G+GF+ + E++ + + +K N + LN QV V Sbjct: 158 D-SSGQSKGYGFVQYANEESAQKAI-EKLNGMLLNDKQVYV 196 Score = 41.6 bits (96), Expect = 0.007 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = +2 Query: 341 GAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF- 517 G A F ++VG L + D + D F + G VV + D T RS G+G++ F Sbjct: 26 GGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFT 85 Query: 518 ---DAEKTVDELLAKKGNKIDLNGTQVEV 595 DA + + EL N I L G + V Sbjct: 86 NPQDAARAIQEL-----NYIPLYGKPIRV 109
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 68.2 bits (165), Expect = 7e-11 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + + F +G I+ ++ + + K G+GF+ + +R Sbjct: 96 SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAER 153 Query: 278 VIE--------DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFF 433 IE D V G+ K + A K+F +++ + D+ KD F Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTN--VYIKNFGEDMDDERLKDLF 211 Query: 434 SKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKK 601 KFG + +++ D S +S+GFGF+ F DA+K VDE+ K +LNG Q+ V + Sbjct: 212 GKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGK-----ELNGKQIYVGR 265 Query: 602 AEPK 613 A+ K Sbjct: 266 AQKK 269 Score = 66.2 bits (160), Expect = 3e-10 Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAI-EKMNGMLLNDRKVFVGRFKSRK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 K+ FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ + R Sbjct: 208 KDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + + + F+ K ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 68.2 bits (165), Expect = 7e-11 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + + F +G I+ ++ + + K G+GF+ + +R Sbjct: 96 SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAER 153 Query: 278 VIE--------DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFF 433 IE D V G+ K + A K+F +++ + D+ KD F Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTN--VYIKNFGEDMDDERLKDLF 211 Query: 434 SKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKK 601 KFG + +++ D S +S+GFGF+ F DA+K VDE+ K +LNG Q+ V + Sbjct: 212 GKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGK-----ELNGKQIYVGR 265 Query: 602 AEPK 613 A+ K Sbjct: 266 AQKK 269 Score = 66.2 bits (160), Expect = 3e-10 Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAI-EKMNGMLLNDRKVFVGRFKSRK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 K+ FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ + R Sbjct: 208 KDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + + + F+ K ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 68.2 bits (165), Expect = 7e-11 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + + F +G I+ ++ + + K G+GF+ + +R Sbjct: 96 SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAER 153 Query: 278 VIE--------DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFF 433 IE D V G+ K + A K+F +++ + D+ KD F Sbjct: 154 AIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTN--VYIKNFGEDMDDERLKDLF 211 Query: 434 SKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKK 601 KFG + +++ D S +S+GFGF+ F DA+K VDE+ K +LNG Q+ V + Sbjct: 212 GKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGK-----ELNGKQIYVGR 265 Query: 602 AEPK 613 A+ K Sbjct: 266 AQKK 269 Score = 66.2 bits (160), Expect = 3e-10 Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAI-EKMNGMLLNDRKVFVGRFKSRK 177 Score = 50.8 bits (120), Expect = 1e-05 Identities = 32/153 (20%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 K+ FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ + R Sbjct: 208 KDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + + + F+ K ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 67.4 bits (163), Expect = 1e-10 Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T+ + FGKYG IV+ ++MK+R T K RGF F+T+ PA V D Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 290 --NHVIDGKQVEIKR 328 +DGK +++++ Sbjct: 69 MNGKSLDGKAIKVEQ 83 Score = 57.0 bits (136), Expect = 2e-07 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 20/137 (14%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL T + + F K+G++VE ++ D TN+SRGF F+ F++ + +A+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKD-VAR 67 Query: 554 KGNKIDLNGTQVEVKKA-------------EPKKPSNPPHSL-------DSKPRRSPYAD 673 N L+G ++V++A P + PP L P R Y D Sbjct: 68 DMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMD 127 Query: 674 GYDGFASSYNNGGRLAP 724 G++ ++N P Sbjct: 128 D-GGYSMNFNMSSSRGP 143
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 67.0 bits (162), Expect = 2e-10 Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 20/248 (8%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + K ++ A +F+G LS K+ F G ++ A ++ ER T + RG+G++ + Sbjct: 158 KQKNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFE 217 Query: 257 DPAIVDRVIED--NHVIDGKQVEIKRTIPKGAAPLKDFKTKK-----------IFVGGLP 397 + + ++ I++ IDG+ + + K A + + KK +F+G L Sbjct: 218 NKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAG--NNDRAKKFGDTPSEPSDTLFLGNLS 275 Query: 398 TALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNK 565 D + F+K G+VV I T + +GFG++ F DA+K +D L +G Sbjct: 276 FNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL---QGEY 332 Query: 566 IDLNGTQVEVKKAEPKKPSNPPHSLD-SKPRRSPYADGYDGFASSY--NNGGRLAPYKST 736 ID N P LD S PR P DG G + + GGR + Sbjct: 333 ID-----------------NRPVRLDFSSPR--PNNDGGRGGSRGFGGRGGGRGG---NR 370 Query: 737 GFGTRPGS 760 GFG R G+ Sbjct: 371 GFGGRGGA 378
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 230 Score = 66.6 bits (161), Expect = 2e-10 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +GEI +AV++ +R T K RG+GF+T +D + Sbjct: 5 QKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 DR +D N +IDG++ + Sbjct: 65 ADRACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 30/83 (36%), Positives = 45/83 (54%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG++ E +I D T +SRG+GF+ A+++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTM-ADRSA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 + K N I ++G + V A Sbjct: 65 ADRACKDPNPI-IDGRKANVNLA 86
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 66.2 bits (160), Expect = 3e-10 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +GEI +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 31/83 (37%), Positives = 44/83 (53%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG++ E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 66.2 bits (160), Expect = 3e-10 Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAI-EKMNGMLLNDRKVFVGRFKSRK 177 Score = 52.0 bits (123), Expect = 5e-06 Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 KE FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ + R Sbjct: 208 KELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + + + F+ K ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 66.2 bits (160), Expect = 3e-10 Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T+ + FGKYG IV+ ++MK+R T K RGF F+T+ PA D Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 290 --NHVIDGKQVEIKR 328 +DGK +++++ Sbjct: 69 MNGKSLDGKAIKVEQ 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 29/83 (34%), Positives = 49/83 (59%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL T + + F K+G++VE ++ D TN+SRGF F+ F++ + A+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKD-AAR 67 Query: 554 KGNKIDLNGTQVEVKKAEPKKPS 622 N L+G ++V++A KPS Sbjct: 68 DMNGKSLDGKAIKVEQA--TKPS 88
>Q62176:RBM38_MOUSE RNA-binding protein 38 - Mus musculus (Mouse)| Length = 237 Score = 65.9 bits (159), Expect = 4e-10 Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 1/72 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A DR +D Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 290 -NHVIDGKQVEI 322 N +IDG++ + Sbjct: 93 PNPIIDGRKANV 104 Score = 52.8 bits (125), Expect = 3e-06 Identities = 30/83 (36%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 27 KDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 85 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 + K N I ++G + V A Sbjct: 86 ADRACKDPNPI-IDGRKANVNLA 107
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 65.9 bits (159), Expect = 4e-10 Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAIDKM-NGMLLNDRKVFVGRFKSRK 177 Score = 54.7 bits (130), Expect = 8e-07 Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNHVID----------- 304 KE+FG+YG + +M + H K RGFGF+++ + ++D + D Sbjct: 208 KEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRA 266 Query: 305 ----GKQVEIKRTIPKGAAP-LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 +Q E+KR + + ++ ++V L + D+ + F+ FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 ME--GGRSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 65.9 bits (159), Expect = 4e-10 Identities = 41/172 (23%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI G+ V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGRPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAIDKM-NGMLLNDRKVFVGRFKSRK 177 Score = 48.1 bits (113), Expect = 8e-05 Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNHVID----------- 304 KE FGKYG + +M + + K +GFGF+++ + +++ + D Sbjct: 208 KEMFGKYGPALSVKVMTDDNG-KSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRA 266 Query: 305 ----GKQVEIKRTIPKGAAP-LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 +Q E+KR + + ++ ++V L + D+ + F FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 65.9 bits (159), Expect = 4e-10 Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IF+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+GF+ F+ ++ + + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYGFVHFETQEAAERAI-EKMNGMLLNDRKVFVGRFKSQK 177 Score = 52.0 bits (123), Expect = 5e-06 Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 KE FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ + R Sbjct: 208 KELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 + + + F+ K ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 65.9 bits (159), Expect = 4e-10 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 4/141 (2%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A D++ + FS+FG V++ +II D + RSRGFGF+ F EK + + + + Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSK--PRRSPYADGYDGFASSYNNGGRLAPY 727 K +L+G + V +A+ + RS GY G +GG Y Sbjct: 67 MNGK-ELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGY 125 Query: 728 --KSTGFGTRPGSYSSAYVPG 784 +S G+G+ G Y G Sbjct: 126 ERRSGGYGSGGGGGGRGYGGG 146 Score = 51.6 bits (122), Expect = 7e-06 Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 + F+GGL+ T+ + F ++G+++D+ I+ +R + + RGFGF+T+ D + IE+ Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 290 --NHVIDGKQVEIKRTIPKGA 346 +DG+ + + +G+ Sbjct: 67 MNGKELDGRVITVNEAQSRGS 87
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 65.1 bits (157), Expect = 6e-10 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 2/191 (1%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 GS ++ AS + + L + + F G I IM++ T G+ F+ Sbjct: 112 GSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFV 171 Query: 248 TYSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPL-KDFKTKKIFVGGLPTALRDDEFK 424 ++ R I+ V++G V KR A P + K ++V LP + DD+ Sbjct: 172 DFTSEMDSQRAIK---VLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLD 228 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ-VEVKK 601 F K+G +V+ I+ D T R RG F+ ++ + E ++ N I G+Q + V+ Sbjct: 229 TIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 288 Query: 602 AEPKKPSNPPH 634 AE + H Sbjct: 289 AEEHGKAKAAH 299
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 65.1 bits (157), Expect = 6e-10 Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 6/220 (2%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 G G+ G + + + L + + F G I IMK+ T G+ F+ Sbjct: 72 GGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFV 131 Query: 248 TYSDPAIVDRVIEDNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEF 421 ++ I+ + + K++++ P G + K ++V LP + DDE Sbjct: 132 DFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGG----ESIKDTNLYVTNLPRTITDDEL 187 Query: 422 KDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ-VEVK 598 + F K+G +V+ I+ D T + RG F+ F+ + E ++ N I +Q + V+ Sbjct: 188 EKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVR 247 Query: 599 KAEPKKPSNPPH---SLDSKPRRSPYADGYDGFASSYNNG 709 AE H L P +P G+ S + G Sbjct: 248 LAEEHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNSMVHRG 287
>Q9H0Z9:RBM38_HUMAN RNA-binding protein 38 - Homo sapiens (Human)| Length = 216 Score = 65.1 bits (157), Expect = 6e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 53.9 bits (128), Expect = 1e-06 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 65.1 bits (157), Expect = 6e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 65.1 bits (157), Expect = 6e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 65.1 bits (157), Expect = 6e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 65.1 bits (157), Expect = 6e-10 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 Q + K+F+GGL T+ + ++YF +G+I +AV++ +R T K RG+GF+T +D A Sbjct: 5 QKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAA 64 Query: 269 VDRVIED-NHVIDGKQVEI 322 +R +D N +IDG++ + Sbjct: 65 AERACKDPNPIIDGRKANV 83 Score = 54.7 bits (130), Expect = 8e-07 Identities = 31/83 (37%), Positives = 43/83 (51%) Frame = +2 Query: 356 KDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTV 535 KD KIFVGGLP D + +F FG + E +I D T +SRG+GF+ A++ Sbjct: 6 KDTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTM-ADRAA 64 Query: 536 DELLAKKGNKIDLNGTQVEVKKA 604 E K N I ++G + V A Sbjct: 65 AERACKDPNPI-IDGRKANVNLA 86
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 65.1 bits (157), Expect = 6e-10 Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G ++ + ++ T++ G+ ++ + PA +R ++ Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK + I + + L+ +F+ L ++ + D FS FG ++ Sbjct: 71 TMNFDVIKGKPIRIMWS--QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 +++CD N S+G+ F+ F+ ++ D+ + +K N + LN +V V + + +K Sbjct: 129 KVVCDE--NGSKGYAFVHFETQEAADKAI-EKMNGMLLNDRKVFVGRFKSRK 177 Score = 54.7 bits (130), Expect = 8e-07 Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 19/183 (10%) Frame = +2 Query: 77 EMKQQDGASAAK---MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 E + + GA A + ++I + + KE F ++G+ + +M++ + K +GFGF+ Sbjct: 178 EREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNG-KSKGFGFV 236 Query: 248 TYSDPAIVDRVIEDNH--VIDGK-------------QVEIKRTIPK-GAAPLKDFKTKKI 379 +Y ++ +E+ + I GK Q E+KR + + ++ + Sbjct: 237 SYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNL 296 Query: 380 FVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKG 559 ++ L + D++ + FS FG + +++ + RS+GFGF+ F + + + + + Sbjct: 297 YIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMN 354 Query: 560 NKI 568 +I Sbjct: 355 GRI 357
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 65.1 bits (157), Expect = 6e-10 Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T+ + FGKYG IV+ ++MK+R T K RGF F+T PA D Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 290 --NHVIDGKQVEIKR 328 +DGK +++++ Sbjct: 69 MNGKSLDGKAIKVEQ 83 Score = 53.9 bits (128), Expect = 1e-06 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 20/137 (14%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL T + + F K+G++VE ++ D TN+SRGF F+ ++ + A+ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKD-AAR 67 Query: 554 KGNKIDLNGTQVEVKKA-------------EPKKPSNPPHSL-------DSKPRRSPYAD 673 N L+G ++V++A P + PP L P R Y D Sbjct: 68 DMNGKSLDGKAIKVEQATKPFFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMD 127 Query: 674 GYDGFASSYNNGGRLAP 724 G++ ++N P Sbjct: 128 D-GGYSMNFNMSSSRGP 143
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 65.1 bits (157), Expect = 6e-10 Identities = 43/132 (32%), Positives = 63/132 (47%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A D E + FS+FG+V++ +II D T RSRGFGF+ F EK++ + + + Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 K +L+G + V +A+ + GY G Y + Y S Sbjct: 67 MNGK-ELDGRTITVNEAQ-SRGGGGGGGRGGGGYGGRGGGGYGGGGGGYGDRRGGGGYGS 124 Query: 734 TGFGTRPGSYSS 769 G G G Y S Sbjct: 125 GGGGRGGGGYGS 136 Score = 53.5 bits (127), Expect = 2e-06 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 + F+GGL+ T + F ++GE++D+ I+ +R T + RGFGF+T+ D + I++ Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 290 --NHVIDGKQVEIKRTIPKG 343 +DG+ + + +G Sbjct: 67 MNGKELDGRTITVNEAQSRG 86
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 65.1 bits (157), Expect = 6e-10 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 8/160 (5%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+FVGGL + + FSK+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY- 727 G +D G Q+ V +A + + G ++ GG Y Sbjct: 67 MNGKSVD--GRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYG 124 Query: 728 ------KSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 +S G+G Y+S GSY GSY +Y Sbjct: 125 GGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSY 164 Score = 62.0 bits (149), Expect = 5e-09 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+F+GGLS T+ ++ F KYG+I + V++K+R TQ+ RGFGF+T+ D A + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGKSVDGRQIRV 79
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 65.1 bits (157), Expect = 6e-10 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 8/160 (5%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+FVGGL + + FSK+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY- 727 G +D G Q+ V +A + + G ++ GG Y Sbjct: 67 MNGKSVD--GRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYG 124 Query: 728 ------KSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 +S G+G Y+S GSY GSY +Y Sbjct: 125 GGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSY 164 Score = 62.0 bits (149), Expect = 5e-09 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+F+GGLS T+ ++ F KYG+I + V++K+R TQ+ RGFGF+T+ D A + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGKSVDGRQIRV 79
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 65.1 bits (157), Expect = 6e-10 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 8/160 (5%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD-AEKTVDELLA 550 K+FVGGL + + FSK+G++ E ++ D T RSRGFGF+ F+ + D ++A Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY- 727 G +D G Q+ V +A + + G ++ GG Y Sbjct: 67 MNGKSVD--GRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGGDRGYG 124 Query: 728 ------KSTGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 +S G+G Y+S GSY GSY +Y Sbjct: 125 GGRFESRSGGYGGSRDYYASRSQGGSYGYRSSGGSYRDSY 164 Score = 62.0 bits (149), Expect = 5e-09 Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVI 283 K+F+GGLS T+ ++ F KYG+I + V++K+R TQ+ RGFGF+T+ D A + Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGKSVDGRQIRV 79
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 64.7 bits (156), Expect = 8e-10 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T + + FGKYG I + ++MK+R T K RGF FIT+ PA + D Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68 Query: 290 --NHVIDGKQVEI 322 +DGK +++ Sbjct: 69 MNGKSLDGKAIKV 81 Score = 48.5 bits (114), Expect = 6e-05 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL + + F K+G++ E ++ D TN+SRGF FI F E D A Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITF--ESPADAKAAV 66 Query: 554 KGNKIDLNGTQVE---VKKAEPKKPS 622 + D+NG ++ +K A+ KP+ Sbjct: 67 R----DMNGKSLDGKAIKVAQATKPA 88
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 64.7 bits (156), Expect = 8e-10 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T + FGKYG IV+ ++MK+R T K RGF F+T+ PA D Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68 Query: 290 --NHVIDGKQVEI 322 +DGK +++ Sbjct: 69 MNGKSLDGKAIKV 81 Score = 52.4 bits (124), Expect = 4e-06 Identities = 30/113 (26%), Positives = 51/113 (45%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL + + F K+G++VE ++ D TN+SRGF F+ F++ Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANA------ 62 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGG 712 K D+NG ++ K + + + P + P + G F GG Sbjct: 63 KAAARDMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGG 115
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 64.7 bits (156), Expect = 8e-10 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+ +T + FGKYG IV+ ++MK+R T K RGF F+T+ PA D Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68 Query: 290 --NHVIDGKQVEI 322 +DGK +++ Sbjct: 69 MNGKSLDGKAIKV 81 Score = 52.8 bits (125), Expect = 3e-06 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL + + F K+G++VE ++ D TN+SRGF F+ F E D A Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTF--ESPADAKAAA 66 Query: 554 KGNKIDLNGTQVE---VKKAEPKKPS--------NPPHSL------------DSKPRRSP 664 + D+NG ++ +K A+ KP+ PP S PRRSP Sbjct: 67 R----DMNGKSLDGKAIKVAQATKPAFESSRRGPPPPRSRGRPRFLRGTRGGGGGPRRSP 122 Query: 665 YADGYD---GFASSYNNGGRLAP 724 G D G+A+ ++ AP Sbjct: 123 SRGGPDDDGGYAADFDLRPSRAP 145
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 64.3 bits (155), Expect = 1e-09 Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 20/193 (10%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 A+ ++I L + + F + FG++GEI ++K+++ KPRGFGF+ Y++ + Sbjct: 258 ANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQN-DKPRGFGFVNYANHECAQK 316 Query: 278 VIED--NHVIDGKQVEIKRTIPK--------------GAAPLKDFKTKKIFVGGLPTALR 409 +++ + GK++ + R K + ++ +F+ L + Sbjct: 317 AVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVD 376 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLN 577 D+ K FS FG + +I+ D +S+GFGF+ + +A K V E+ N+ L Sbjct: 377 DERLKAEFSAFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVTEM-----NQRMLA 430 Query: 578 GTQVEVKKAEPKK 616 G + V A+ K+ Sbjct: 431 GKPLYVALAQRKE 443 Score = 53.5 bits (127), Expect = 2e-06 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 +FI L + F +G+I+ + + +G+GF+ + + IE Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEHV 228 Query: 287 ------DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 D V G V + K A +F +++ L T + + EF D F +FG+ Sbjct: 229 NGMLLNDKKVYVGHHVSRRERQSKVEALKANFTN--VYIKNLDTEITEQEFSDLFGQFGE 286 Query: 449 VVEHEIICDHSTNRSRGFGFIVFD----AEKTVDELLAK--KGNKIDLNGTQVEVKKAE 607 + ++ D + ++ RGFGF+ + A+K VDEL K KG K+ + Q + ++ E Sbjct: 287 ITSLSLVKDQN-DKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREE 344 Score = 50.8 bits (120), Expect = 1e-05 Identities = 34/167 (20%), Positives = 82/167 (49%), Gaps = 2/167 (1%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 ++A +++G L + E F G + + ++ T++ G+ ++ + + ++ Sbjct: 78 TSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKA 137 Query: 281 IEDNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVV 454 +++ + +I G+ I + + L+ T +F+ L A+ + D FS FGK++ Sbjct: 138 LDELNYTLIKGRPCRIMWS--QRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKIL 195 Query: 455 EHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 ++ D N ++G+GF+ FD+ ++ + + + N + LN +V V Sbjct: 196 SCKVAVDELGN-AKGYGFVHFDSVESANAAI-EHVNGMLLNDKKVYV 240
>Q10422:YDC1_SCHPO Uncharacterized RNA-binding protein C25G10.01 - Schizosaccharomyces| pombe (Fission yeast) Length = 297 Score = 63.5 bits (153), Expect = 2e-09 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 6/184 (3%) Frame = +2 Query: 284 EDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 ED + + + + P+ A + +FV G+ + +++DE + FSKFG V Sbjct: 72 EDEVDPNNESTALDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVR 131 Query: 464 IICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNP- 628 I+ + T SRGFGF+ F +A +D L N + G + V+KA+ +P +P Sbjct: 132 IMREPVTKASRGFGFLSFSTVEEATSAIDNL-----NSQEFYGRVLNVQKAKRSRPHSPT 186 Query: 629 PHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGS-YSSAYVPGSYSSAYV 805 P RR D F S+ +GG Y+ + R + Y ++Y P + Sbjct: 187 PGKYMGYDRRRNSRD----FPSNNKDGG----YRRNNYRDRDSNRYRNSYRPSRPQREHS 238 Query: 806 PGSY 817 PG+Y Sbjct: 239 PGNY 242 Score = 38.9 bits (89), Expect = 0.047 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 +F+ G++ + ++ F K+G + IM+E T+ RGFGF+++S Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFS 150
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 63.5 bits (153), Expect = 2e-09 Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 2/143 (1%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A D + F+++G V++ +II D T RSRGFGF+ F EK + + + + Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAI-E 67 Query: 554 KGNKIDLNGTQVEVKKAEPKKP--SNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY 727 N DL+G + V +A+ + RS GY G SY GG Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGGG----- 122 Query: 728 KSTGFGTRPGSYSSAYVPGSYSS 796 G R G + G YSS Sbjct: 123 -----GRREGGGGYSGGGGGYSS 140 Score = 55.1 bits (131), Expect = 6e-07 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ T + F +YG+++D+ I+ +R T + RGFGF+T+ D + IE Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 287 -DNHVIDGKQVEIKRTIPKGA 346 + +DG+ + + +G+ Sbjct: 69 MNGQDLDGRSITVNEAQSRGS 89
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 62.8 bits (151), Expect = 3e-09 Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 23/244 (9%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED- 289 +F+G LS Q + K F +G I DA ++K+ T K +G+GF+++ + + I+ Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 290 -NHVIDGKQVEIKRTIPKGAAPLKDFKTKK------------------IFVGGLPTALRD 412 + G+Q+ K AP +++ ++ GG+ + L + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 227 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVE 592 + FS FG+++E + D +G+ F+ F++ ++ + + +NGT +E Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAI------VSVNGTTIE 275 Query: 593 --VKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRP-GSY 763 V K K + + + + Y Y + Y N ++ Y G+ G Y Sbjct: 276 GHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMY 335 Query: 764 SSAY 775 A+ Sbjct: 336 GQAW 339 Score = 51.6 bits (122), Expect = 7e-06 Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +++G LSR + + F + G + ++ + P F A + Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68 Query: 293 HVIDGKQVEIK-RTIP----KGAAPLKDFKTKK------IFVGGLPTALRDDEFKDFFSK 439 I GK+V++ T P K + T++ +FVG L + ++ K F+ Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAFAP 128 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 FG++ + ++ D +T +S+G+GF+ F + + + + G + L G Q+ A +KP Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW-LGGRQIRTNWA-TRKP 186 Query: 620 SNPPHSLDSKPRRSPY 667 P + +S ++ Y Sbjct: 187 PAPKSTYESNTKQLSY 202
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 62.8 bits (151), Expect = 3e-09 Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 12/184 (6%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +F+ L + + + +G I+ ++ + + K G+GF+ + +R Sbjct: 96 SGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSK--GYGFVHFETHEAAER 153 Query: 278 VIE--DNHVIDGKQVEI------KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFF 433 I+ + +++G++V + K + A K+F +++ + D+ KD F Sbjct: 154 AIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPN--VYIKNFGEDMDDERLKDLF 211 Query: 434 SKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKK 601 KFG + +++ D S +S+GFGF+ F DA+K VDE+ K +LNG Q+ V + Sbjct: 212 GKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGK-----ELNGKQIYVGR 265 Query: 602 AEPK 613 A+ K Sbjct: 266 AQKK 269 Score = 56.2 bits (134), Expect = 3e-07 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 2/172 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + E F G I+ I ++ T + ++ + + ++ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI GK V I + + L+ IFV L ++ + D S FG ++ Sbjct: 71 TMNFDVIKGKPVRIMWS--QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKK 616 ++CD N S+G+GF+ F+ + + + KK N + LNG +V V + + +K Sbjct: 129 NVVCDE--NGSKGYGFVHFETHEAAERAI-KKMNGMLLNGRKVFVGQFKSRK 177 Score = 53.5 bits (127), Expect = 2e-06 Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQV----- 316 K+ FGK+G + +M + + K +GFGF+++ + +++ + ++GKQ+ Sbjct: 208 KDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266 Query: 317 --------EIKRTIPKGAAP-LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 E+KRT + + ++ ++V L + D+ + FS FG + +++ Sbjct: 267 QKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + RS+GFGF+ F + + + + + +I Sbjct: 327 MEGG--RSKGFGFVCFSSPEEATKAVTEMNGRI 357
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 62.4 bits (150), Expect = 4e-09 Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 9/195 (4%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +QQ A ++++G +S + T + F +G I + + TQK +GF F+ Y P Sbjct: 122 RQQALALMCRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIP 181 Query: 263 AIVDRVIEDNH--VIDGKQVEIKR--TIPKGAAPLKDFKTK-----KIFVGGLPTALRDD 415 +E + ++ G+ +++ R +P+ + + + + +I+V + L ++ Sbjct: 182 EGAQLALEQMNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEE 241 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 + K F FG ++ ++ S + +G+GFI + ++ +DE +A N DL G + V Sbjct: 242 DIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM-NLFDLGGQLLRV 300 Query: 596 KKAEPKKPSNPPHSL 640 ++ PP++L Sbjct: 301 GRS-----ITPPNAL 310
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 62.0 bits (149), Expect = 5e-09 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A ++ + F+ FG+V++ ++I D T RSRGFGF+ F +E+++ + + Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLD------SKPRRSPYADGYDGFASSYNNGGR 715 K +L+G + V +A+ + Y G G+ GG Sbjct: 69 MNGK-ELDGRNITVNQAQSRGGGGGGGGYGGGGGGYGGREGGGYGGGGGGYGGRREGGG- 126 Query: 716 LAPYKSTGFGTRPGSYSSAYVPGSY 790 Y G+G G Y G Y Sbjct: 127 --GYGGGGYGGGGGGYGGREGGGGY 149 Score = 53.9 bits (128), Expect = 1e-06 Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ T+ T ++ F +G+++D+ ++ +R T + RGFGF+T+S + IE Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 287 -DNHVIDGKQVEIKRTIPKG 343 + +DG+ + + + +G Sbjct: 69 MNGKELDGRNITVNQAQSRG 88
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 62.0 bits (149), Expect = 5e-09 Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 1/151 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A + + FS+FG++V+ +II D T RSRGFGF+ F EK++ + + + Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI-E 67 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 N DL+G + V +A+ R S G G Y GG Sbjct: 68 GMNGQDLDGRSITVNEAQ--------------SRGSGAGGGGRGGGGGYRGGG------- 106 Query: 734 TGFGTRPGSYSSA-YVPGSYSSAYVPGSYSS 823 G+G G Y G YS G YSS Sbjct: 107 -GYGGGGGGYGGGRREGGGYSGG--GGGYSS 134 Score = 55.1 bits (131), Expect = 6e-07 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ T + + F ++GE+VD+ I+ +R T + RGFGF+T+ D + IE Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 287 -DNHVIDGKQVEIKRTIPKGA 346 + +DG+ + + +G+ Sbjct: 69 MNGQDLDGRSITVNEAQSRGS 89
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 62.0 bits (149), Expect = 5e-09 Identities = 45/137 (32%), Positives = 65/137 (47%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A D+ + FS+FG + + +II D T RSRGFGF+ F EK++ + + + Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAI-E 65 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 N +L+G + V +A+ + S RR GY G Y GGR Sbjct: 66 GMNGQELDGRNITVNEAQSR------GSGGGGGRREGGGGGYGG-GGGY--GGRREGGGG 116 Query: 734 TGFGTRPGSYSSAYVPG 784 G+G R Y G Sbjct: 117 GGYGGRREGGGGGYGGG 133 Score = 54.3 bits (129), Expect = 1e-06 Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 2/81 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ T+ + ++ F ++G+I D+ I+ +R T + RGFGF+T+ D + IE Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 287 -DNHVIDGKQVEIKRTIPKGA 346 + +DG+ + + +G+ Sbjct: 67 MNGQELDGRNITVNEAQSRGS 87
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 60.8 bits (146), Expect = 1e-08 Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 18/187 (9%) Frame = +2 Query: 83 KQQDGA--SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + + GA S +++ L ++ + K+ FGKYG+I AV+MK++ + R FGF+ + Sbjct: 215 RSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFV 273 Query: 257 DPAIVDRVIEDNHVI---------------DGKQVEIKRTI-PKGAAPLKDFKTKKIFVG 388 P +E + I ++ E++R + + + + +++ Sbjct: 274 SPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLK 333 Query: 389 GLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 L ++ D++ K+ FS++G V +++ +S SRGFGF+ + + + LLA K Sbjct: 334 NLDDSVNDEKLKEMFSEYGNVTSCKVMM-NSQGLSRGFGFVAYSNPE--EALLAMK---- 386 Query: 569 DLNGTQV 589 ++NG + Sbjct: 387 EMNGKMI 393 Score = 45.4 bits (106), Expect = 5e-04 Identities = 31/163 (19%), Positives = 73/163 (44%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 + +++G L + + F + + + + ++ T + G+ ++ +++P R +E Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAME 103 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 + + I+ + + +F+ L ++ + + FS FG ++ ++ Sbjct: 104 SLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKV 163 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 D RS+G+GF+ F+ E+T + K N + LN QV V Sbjct: 164 AMD-VVGRSKGYGFVQFEKEETAQAAIDKL-NGMLLNDKQVFV 204
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 60.5 bits (145), Expect = 1e-08 Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 1/196 (0%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGF-GFITYSDPA 265 +D +++G LSR + + F + G ++ E + P F F + D A Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62 Query: 266 IVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFG 445 + ++ GK+V++ + +FVG L + ++ K F+ FG Sbjct: 63 AALAAMNGRKIL-GKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFG 121 Query: 446 KVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSN 625 K+ + ++ D +T +S+G+GF+ F + + + G + L G Q+ A +KP Sbjct: 122 KISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW-LGGRQIRTNWA-TRKPPA 179 Query: 626 PPHSLDSKPRRSPYAD 673 P + ++ ++ + D Sbjct: 180 PKSTQENNTKQLRFED 195 Score = 59.3 bits (142), Expect = 3e-08 Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 20/190 (10%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +++D ++ +F+G LS + + K F +G+I DA ++K+ T K +G+GF+++ + Sbjct: 89 QKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 148 Query: 263 AIVDRVI--EDNHVIDGKQVEIKRTIPKGAAP--LKDFKTKK----------------IF 382 + I + G+Q+ K AP ++ TK+ ++ Sbjct: 149 LDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVY 208 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 GG+ + L D + FS FG+++E + + +G+ F+ F ++ + Sbjct: 209 CGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAI----- 257 Query: 563 KIDLNGTQVE 592 + +NGT +E Sbjct: 258 -VSVNGTTIE 266
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 60.5 bits (145), Expect = 1e-08 Identities = 49/214 (22%), Positives = 84/214 (39%), Gaps = 1/214 (0%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 G G+ + +G + + + L + + F G I IMK+ T G+ F+ Sbjct: 92 GGGDTQAVNGTN---LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFV 148 Query: 248 TYSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPL-KDFKTKKIFVGGLPTALRDDEFK 424 ++ I+ ++G V KR A P + K ++V LP + DDE + Sbjct: 149 DFASEIDAQNAIK---TVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELE 205 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKA 604 F K+G +V+ I+ D T R RG F+ F+ + E ++ N I +Q + Sbjct: 206 KIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRL 265 Query: 605 EPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNN 706 + H ++ P A YNN Sbjct: 266 AEEHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNN 299
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 60.5 bits (145), Expect = 1e-08 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP--AIVDRVI 283 K+F+GGL+ T +++F +G I + V++K+R TQ+ RGFGFIT+++P A V Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 284 EDNHVIDGKQVEI 322 + +DG+Q+ + Sbjct: 67 MNGESLDGRQIRV 79 Score = 59.7 bits (143), Expect = 3e-08 Identities = 51/161 (31%), Positives = 67/161 (41%), Gaps = 4/161 (2%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLA 550 K+FVGGL + +D FS FG + E ++ D T RSRGFGFI F + E + A Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGY--DGFASSYNNGGRLAP 724 G +D G Q+ V A K R G+ G SY+ GG Sbjct: 67 MNGESLD--GRQIRVDHA-------------GKSARGTRGGGFGAHGRGRSYSRGGGDQG 111 Query: 725 YKS-TGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAYVPGDY 844 Y S + +RPG Y Y + G Y Y G+Y Sbjct: 112 YGSGRYYDSRPGGYGYGYGRSRDYNGRNQGGY-DRYSGGNY 151
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 60.1 bits (144), Expect = 2e-08 Identities = 47/232 (20%), Positives = 97/232 (41%), Gaps = 22/232 (9%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED- 289 +F+G LS + + K F +G I DA ++K+ T K +G+GF+++ + + I+ Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 290 -NHVIDGKQVEIKRTIPKGAAPLKDFKTKK------------------IFVGGLPTALRD 412 + G+Q+ K AP +++ ++ GG+ + L + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 227 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVE 592 + FS FG+++E + D +G+ F+ F + ++ + + +NGT +E Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAI------VSVNGTTIE 275 Query: 593 --VKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGF 742 V K K + + + + Y Y + Y N ++ Y G+ Sbjct: 276 GHVVKCYWGKETLDMINPVQQQNQIGYPPTYGQWGQWYGNAQQIGQYVPNGW 327 Score = 51.6 bits (122), Expect = 7e-06 Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 11/196 (5%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +++G LSR + + F + G + ++ + P F A + Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNG 68 Query: 293 HVIDGKQVEIK-RTIP----KGAAPLKDFKTKK------IFVGGLPTALRDDEFKDFFSK 439 I GK+V++ T P K + T++ +FVG L + ++ K F+ Sbjct: 69 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 128 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 FG++ + ++ D +T +S+G+GF+ F + + + + G + L G Q+ A +KP Sbjct: 129 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQW-LGGRQIRTNWA-TRKP 186 Query: 620 SNPPHSLDSKPRRSPY 667 P + +S ++ Y Sbjct: 187 PAPKSTYESNTKQLSY 202
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 60.1 bits (144), Expect = 2e-08 Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 2/187 (1%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 M +S + + L + + F G I IM++ T G+ F+ ++ Sbjct: 118 MMHDQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTS 177 Query: 260 PAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPL-KDFKTKKIFVGGLPTALRDDEFKDFFS 436 R I+ V++G V KR A P + K ++V LP + DD+ F Sbjct: 178 EMDSQRAIK---VLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFG 234 Query: 437 KFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ-VEVKKAEPK 613 K+G +V+ I+ D T R RG F+ ++ + E ++ N I G+Q + V+ A+ Sbjct: 235 KYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAQEH 294 Query: 614 KPSNPPH 634 + H Sbjct: 295 GKAKAAH 301
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 59.7 bits (143), Expect = 3e-08 Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 20/190 (10%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDP 262 +++D ++ +F+G LS + + K F +G+I DA ++K+ T K +G+GF+++ + Sbjct: 106 QKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNK 165 Query: 263 AIVDRVI--EDNHVIDGKQVEIKRTIPKGAAP--LKDFKTKK----------------IF 382 + I + G+Q+ K AP ++ TK+ ++ Sbjct: 166 LDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVY 225 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 GG+ + L D + FS FG+++E + + +G+ F+ F ++ + Sbjct: 226 CGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAI----- 274 Query: 563 KIDLNGTQVE 592 + +NGT +E Sbjct: 275 -VSVNGTTIE 283 Score = 54.3 bits (129), Expect = 1e-06 Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 17/212 (8%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKE----RHTQKPRGFGFI--T 250 +D +++G LSR + + F + G ++ E R GF + T Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62 Query: 251 YSDPAIVDRVIE-----------DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLP 397 +DP E + I GK+V++ + +FVG L Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLS 122 Query: 398 TALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLN 577 + ++ K F+ FGK+ + ++ D +T +S+G+GF+ F + + + G + L Sbjct: 123 PEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQW-LG 181 Query: 578 GTQVEVKKAEPKKPSNPPHSLDSKPRRSPYAD 673 G Q+ A +KP P + ++ ++ + D Sbjct: 182 GRQIRTNWA-TRKPPAPKSTQETNTKQLRFED 212
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 59.7 bits (143), Expect = 3e-08 Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 18/182 (9%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV---- 271 A +F L+ + +E+F G++ D ++ +R++++ RG ++ + D + V Sbjct: 152 ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI 211 Query: 272 ----DRVIEDNHVIDGKQVEIKRT------IPKGAAPLKDFKTKKIFVGGLPTALRDDEF 421 RV+ ++ Q E R + KG+A +++VG L + +D Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAG-----PMRLYVGSLHFNITEDML 266 Query: 422 KDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDELLAKKGNKIDLNGTQV 589 + F FG++ +++ D T RS+G+GFI F A+K +++L N +L G + Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL-----NGFELAGRPM 321 Query: 590 EV 595 +V Sbjct: 322 KV 323 Score = 39.3 bits (90), Expect = 0.036 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 Q+ A ++++G L + + F +G I +M + T + +G+GFIT+SD Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302 Query: 266 IVDRVIE 286 + +E Sbjct: 303 CAKKALE 309
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 59.3 bits (142), Expect = 3e-08 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 3/192 (1%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 G G G++ + + L + + F G I IM++ T G+ F+ Sbjct: 97 GGGRDGHGGGSNGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFV 156 Query: 248 TYSDPAIVDRVIEDNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEF 421 ++ R I+ + + K++++ P G + K ++V LP + DD+ Sbjct: 157 DFAAETDSQRAIKSLNGITVRNKRLKVSYARPGG----ESIKDTNLYVTNLPRTITDDQL 212 Query: 422 KDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ-VEVK 598 F K+G +V+ I+ D T + RG F+ F+ + E ++ N I +Q + V+ Sbjct: 213 DTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVR 272 Query: 599 KAEPKKPSNPPH 634 AE + H Sbjct: 273 LAEEHGKAKAQH 284
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 629 Score = 59.3 bits (142), Expect = 3e-08 Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 2/153 (1%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 G A +++G L + E F G I+ + ++ T++ G+ +I + PA + Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAE 66 Query: 275 RVIEDNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 R ++ + VI G+ + I + + L+ +F+ L ++ + D FS FG Sbjct: 67 RALDTMNFEVIKGRPIRIMWS--QRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGN 124 Query: 449 VVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 ++ +++CD + SRG+GF+ F+ ++ + + Sbjct: 125 ILSCKVVCDE--HGSRGYGFVHFETQEAANRAI 155 Score = 55.1 bits (131), Expect = 6e-07 Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 13/185 (7%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + F +G I+ ++ + H RG+GF+ + +R Sbjct: 96 SGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETQEAANR 153 Query: 278 VIE--DNHVIDGKQVEI-------KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 I+ + +++ ++V + +R + GA K + +++ + D ++ Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLREI 210 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVK 598 FS FG + +++ D T RSRGFGF+ + +A+K V E+ K ++NG + V Sbjct: 211 FSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGK-----EVNGRMIYVG 264 Query: 599 KAEPK 613 +A+ + Sbjct: 265 RAQKR 269 Score = 45.4 bits (106), Expect = 5e-04 Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEI--- 322 +E F +G + +M + T + RGFGF+ Y + + + + + ++G+ + + Sbjct: 208 REIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 Query: 323 -KRTIPKGAAPLKDFKTKK----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 KR +G K + K+ ++V L + DD + FS +G + +++ Sbjct: 267 QKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + S+GFGF+ F + + + + + +I Sbjct: 327 TEGG--HSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 58.9 bits (141), Expect = 4e-08 Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 7/205 (3%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +++G L + + K+YF G I + IM +++ K + F+ Y + ++ Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNN-KNVNYAFVEYHQSHDANIALQ-- 133 Query: 293 HVIDGKQVE---IKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 ++GKQ+E +K + T +FVG L + D+ ++ F F + Sbjct: 134 -TLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGH 192 Query: 464 IICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPP 631 ++ D T SRG+GF+ F DA+ +D + + DLNG + + A + +N Sbjct: 193 VMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQ-----DLNGRPLRINWAAKRDNNNN- 246 Query: 632 HSLDSKPRRSPYADGYDGFASSYNN 706 ++ +R Y + G YNN Sbjct: 247 ---NNYQQRRNYGNNNRGGFRQYNN 268
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 58.5 bits (140), Expect = 6e-08 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 18/182 (9%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV---- 271 A +F L+ + +E+F G++ D ++ +R++++ +G ++ + D + V Sbjct: 152 ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211 Query: 272 ----DRVIEDNHVIDGKQVEIKRT------IPKGAAPLKDFKTKKIFVGGLPTALRDDEF 421 RV+ ++ Q E R + KG+A +++VG L + +D Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAG-----PMRLYVGSLHFNITEDML 266 Query: 422 KDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDELLAKKGNKIDLNGTQV 589 + F FG++ +++ D T RS+G+GFI F A+K +++L N +L G + Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL-----NGFELAGRPM 321 Query: 590 EV 595 +V Sbjct: 322 KV 323 Score = 39.3 bits (90), Expect = 0.036 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 Q+ A ++++G L + + F +G I +M + T + +G+GFIT+SD Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302 Query: 266 IVDRVIE 286 + +E Sbjct: 303 CAKKALE 309
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 58.5 bits (140), Expect = 6e-08 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 18/182 (9%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV---- 271 A +F L+ + +E+F G++ D ++ +R++++ +G ++ + D + V Sbjct: 152 ARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211 Query: 272 ----DRVIEDNHVIDGKQVEIKRT------IPKGAAPLKDFKTKKIFVGGLPTALRDDEF 421 RV+ ++ Q E R + KG+A +++VG L + +D Sbjct: 212 GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAG-----PMRLYVGSLHFNITEDML 266 Query: 422 KDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDELLAKKGNKIDLNGTQV 589 + F FG++ +++ D T RS+G+GFI F A+K +++L N +L G + Sbjct: 267 RGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL-----NGFELAGRPM 321 Query: 590 EV 595 +V Sbjct: 322 KV 323 Score = 39.3 bits (90), Expect = 0.036 Identities = 17/67 (25%), Positives = 33/67 (49%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 Q+ A ++++G L + + F +G I +M + T + +G+GFIT+SD Sbjct: 243 QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302 Query: 266 IVDRVIE 286 + +E Sbjct: 303 CAKKALE 309
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 58.5 bits (140), Expect = 6e-08 Identities = 25/80 (31%), Positives = 50/80 (62%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 + FVGGL A ++ ++ F+ +G++++ ++I D T RSRGFGF+ F +E ++ + + Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 554 KGNKIDLNGTQVEVKKAEPK 613 K +L+G + V +A+ + Sbjct: 69 MNGK-ELDGRNITVNQAQSR 87 Score = 54.7 bits (130), Expect = 8e-07 Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 + F+GGL+ TS + + F YGEI+D+ ++ +R T + RGFGF+T+S + IE Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 287 -DNHVIDGKQVEIKRTIPKG 343 + +DG+ + + + +G Sbjct: 69 MNGKELDGRNITVNQAQSRG 88
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 58.2 bits (139), Expect = 7e-08 Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIGGL+R+T+ K FGK+G I + +++K+R T K RGF FIT+ +PA +D Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKD 67 Query: 290 --NHVIDGKQVEIKR 328 + GK +++++ Sbjct: 68 MNGKSLHGKAIKVEQ 82 Score = 46.2 bits (108), Expect = 3e-04 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 2/156 (1%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+F+GGL + K F K G + E +I D T++SRGF FI F+ AK Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKN-AAK 66 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 N L+G ++V++A KKP S S RR P A + + + G L + Sbjct: 67 DMNGKSLHGKAIKVEQA--KKP-----SFQSGGRRRPPAS-----SRNRSPSGSLRSARG 114 Query: 734 TGFGTRP--GSYSSAYVPGSYSSAYVPGSYSSAYVP 835 + GTR S+ G Y+ + SYS +P Sbjct: 115 SRGGTRGWLPSHEGHLDDGGYTPD-LKMSYSRGLIP 149
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 57.8 bits (138), Expect = 1e-07 Identities = 49/159 (30%), Positives = 62/159 (38%), Gaps = 1/159 (0%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 K+FVG L + + F G V E+I D T RSRGFGF+ V E A+ Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEV-EAAAQ 158 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 + N + G + V P P S PR Y G S GG + Sbjct: 159 QFNGYEFEGRPLRVNAGPP--PPKREESFSRGPRSGGYGSERGGGYGS-ERGGGYGSERG 215 Query: 734 TGFGT-RPGSYSSAYVPGSYSSAYVPGSYSSAYVPGDYS 847 G+G+ R G Y S G Y GS S+Y G S Sbjct: 216 GGYGSERGGGYGSQRSGGGYG-----GSQRSSYGSGSGS 249 Score = 57.4 bits (137), Expect = 1e-07 Identities = 28/82 (34%), Positives = 48/82 (58%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 +++VG L + D ++ F++ GKVVE +I D + RS+GFGF+ + + V + + Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI-N 316 Query: 554 KGNKIDLNGTQVEVKKAEPKKP 619 N DL+G Q+ V +AE + P Sbjct: 317 SLNGADLDGRQIRVSEAEARPP 338 Score = 46.2 bits (108), Expect = 3e-04 Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 GSG S ++++G LS + F + G++V+A ++ +R + + +GFGF+ Sbjct: 244 GSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFV 303 Query: 248 TYSDPAIVDRVIE--DNHVIDGKQVEI 322 T S V + I + +DG+Q+ + Sbjct: 304 TLSSSQEVQKAINSLNGADLDGRQIRV 330 Score = 36.6 bits (83), Expect = 0.23 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 K+F+G LS + F G + ++ ++ T + RGFGF+T S A V+ + Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159 Query: 287 -DNHVIDGKQVEIKRTIP 337 + + +G+ + + P Sbjct: 160 FNGYEFEGRPLRVNAGPP 177
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 57.8 bits (138), Expect = 1e-07 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 5/184 (2%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 GA K+FIG L +T + F KYG +V+ ++K +GF+ Sbjct: 3 GAGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGR 54 Query: 275 RVIEDNHVIDGKQVEIKRTIPKGA-APLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 I++ + + IK K AP + T KIFVG L R E ++ F K+G V Sbjct: 55 DAIQNLNGYTLNEFAIKVEAAKSRRAP--NTPTTKIFVGNLTDKTRAPEVRELFQKYGTV 112 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG----TQVEVKKAEPKKP 619 VE +I+ R +GF+ D V + + + ++ ++G QV + PK Sbjct: 113 VECDIV--------RNYGFVHLDCVGDVQDAIKELNGRV-VDGQPLKVQVSTSRVRPKPG 163 Query: 620 SNPP 631 P Sbjct: 164 MGDP 167 Score = 35.0 bits (79), Expect = 0.67 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + + ++ K+F+G L+ +T +E F KYG +V+ I+ R +GF+ Sbjct: 74 AAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVH 125 Query: 251 YSDPAIVDRVIED--NHVIDGK----QVEIKRTIPK 340 V I++ V+DG+ QV R PK Sbjct: 126 LDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPK 161
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 57.4 bits (137), Expect = 1e-07 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 29/254 (11%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++GGL + S E + G +V + K+R T +GFGF+ + D I+ Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72 Query: 287 DNHVID--GKQVEIKRTIPKGAAPLKDFKT-KKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 ++I GK +++ K +A K+ IFVG L + + D FS FG +++ Sbjct: 73 ILNMIKLYGKPIKVN----KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128 Query: 458 -HEIICDHSTNRSRGFGFIVFDAEKTVDELLA------------------KKGNKIDLNG 580 +I+ D + S+GF FI F + + D L K+ +K + +G Sbjct: 129 VPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHG 188 Query: 581 TQVE--VKKAEPKKPSNPPHSLDSK-----PRRSPYADGYDGFASSYNNGGRLAPYKSTG 739 T E + P P + PH + S P +P A A + + GR Sbjct: 189 TAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRPGYQPPPL 248 Query: 740 FGTRPGSYSSAYVP 781 G Y Y P Sbjct: 249 MGMAQSGYQGQYPP 262
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 57.4 bits (137), Expect = 1e-07 Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 2/149 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A ++IG L + E F G I+ + ++ T++ G+ +I + PA +R ++ Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + VI G+ + I + + L+ +F+ L ++ + D FS FG ++ Sbjct: 71 TMNFEVIKGRPIRIMWS--QRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSC 128 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELL 547 +++CD SRG+GF+ F+ ++ + + Sbjct: 129 KVVCDE--YGSRGYGFVHFETQEAANRAI 155 Score = 53.9 bits (128), Expect = 1e-06 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + F +G+I+ ++ + + RG+GF+ + +R Sbjct: 96 SGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGS--RGYGFVHFETQEAANR 153 Query: 278 VIE--DNHVIDGKQVEI-------KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 I+ + +++ ++V + +R + GA K + +++ + D K+ Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLKEI 210 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVK 598 FS FG + +++ D+S RSRGFGF+ + +A+K V E+ K ++NG V V Sbjct: 211 FSAFGNTLSVKVMMDNS-GRSRGFGFVNYGNHEEAQKAVTEMNGK-----EVNGRMVYVG 264 Query: 599 KAEPK 613 +A+ + Sbjct: 265 RAQKR 269 Score = 45.8 bits (107), Expect = 4e-04 Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEI--- 322 KE F +G + +M + ++ + RGFGF+ Y + + + + + ++G+ V + Sbjct: 208 KEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRA 266 Query: 323 -KRTIPKGAAPLKDFKTKK----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 KR +G K + K+ ++V L + DD + FS +G + +++ Sbjct: 267 QKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + S+GFGF+ F + + + + + +I Sbjct: 327 TEGG--HSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P29558:RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 - Homo| sapiens (Human) Length = 406 Score = 57.0 bits (136), Expect = 2e-07 Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 17/229 (7%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + PA Sbjct: 57 DQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 116 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + G Q ++ A ++ +++ LP ++ + E ++ FG+V Sbjct: 117 QKAVSALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQV 167 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQV-------------- 589 + I+ D S+ SRG GF ++ + + ++ K V Sbjct: 168 ISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADG 226 Query: 590 -EVKKAEPKK--PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY 727 + K+ P K P+ P + + R + YD ++ NG +PY Sbjct: 227 GQKKRQNPNKYIPNGRPWHREGEVRLAGMTLTYDPTTAAIQNGFYPSPY 275
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 57.0 bits (136), Expect = 2e-07 Identities = 34/151 (22%), Positives = 68/151 (45%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 G A +++G L + E F G I+ + ++ T++ G+ +I + PA + Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAE 66 Query: 275 RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVV 454 R ++ + K I+ + L+ IF+ L ++ + D FS FG ++ Sbjct: 67 RALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNIL 126 Query: 455 EHEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 ++ CD + SRGFGF+ F+ + + + Sbjct: 127 SCKVACDE--HGSRGFGFVHFETHEAAQQAI 155 Score = 47.8 bits (112), Expect = 1e-04 Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 9/173 (5%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + F +G I+ + + H RGFGF+ + + Sbjct: 96 SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQ 153 Query: 278 VIE--DNHVIDGKQVEI-------KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 I + +++ ++V + +R GA L+ I+V LP + + +D Sbjct: 154 AINTMNGMLLNDRKVFVGHFKSRREREAELGARALE---FTNIYVKNLPVDVDEQGLQDL 210 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQV 589 FS+FGK++ +++ D+S SR FGF+ F+ + + + + +NG +V Sbjct: 211 FSQFGKMLSVKVMRDNS-GHSRCFGFVNFEKHEEAQKAV------VHMNGKEV 256 Score = 38.9 bits (89), Expect = 0.047 Identities = 28/156 (17%), Positives = 72/156 (46%), Gaps = 19/156 (12%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNHVIDGKQV------- 316 ++ F ++G+++ +M++ ++ R FGF+ + + + ++GK+V Sbjct: 208 QDLFSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVH---MNGKEVSGRLLYA 263 Query: 317 -----------EIKRTIPKGAAP-LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 E+KR + L+ ++ ++V L ++ DD+ + FS +G + Sbjct: 264 GRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSA 323 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 +++ + S+GFGF+ F + + + + + +I Sbjct: 324 KVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P62997:TRA2B_RAT Splicing factor, arginine/serine-rich 10 - Rattus norvegicus (Rat)| Length = 288 Score = 56.6 bits (135), Expect = 2e-07 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 33/169 (19%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FSK+G + + I+ D + RSRGF F+ F+ E ++ N Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKE-AKERAN 180 Query: 563 KIDLNGTQVEVKKAEPKKPSNPPHSL-------DSKPRRSPYADGYDG-------FASSY 700 ++L+G ++ V + K+P P + S RR Y GYD ++ SY Sbjct: 181 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 240 Query: 701 NNGG-------------------RLAPYKSTGFGTRPGSYSSAYVPGSY 790 GG +PY S G G R S S +Y P Y Sbjct: 241 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRG-GYRSRSRSRSYSPRRY 288 Score = 41.2 bits (95), Expect = 0.009 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVIEDNHV 298 GLS T+ +E F KYG I D I+ ++ +++ RGF F+ + D A + + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 299 IDGKQVEIKRTIPK 340 +DG+++ + +I K Sbjct: 184 LDGRRIRVDFSITK 197
>P62996:TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 - Mus musculus (Mouse)| Length = 288 Score = 56.6 bits (135), Expect = 2e-07 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 33/169 (19%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FSK+G + + I+ D + RSRGF F+ F+ E ++ N Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKE-AKERAN 180 Query: 563 KIDLNGTQVEVKKAEPKKPSNPPHSL-------DSKPRRSPYADGYDG-------FASSY 700 ++L+G ++ V + K+P P + S RR Y GYD ++ SY Sbjct: 181 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 240 Query: 701 NNGG-------------------RLAPYKSTGFGTRPGSYSSAYVPGSY 790 GG +PY S G G R S S +Y P Y Sbjct: 241 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRG-GYRSRSRSRSYSPRRY 288 Score = 41.2 bits (95), Expect = 0.009 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVIEDNHV 298 GLS T+ +E F KYG I D I+ ++ +++ RGF F+ + D A + + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 299 IDGKQVEIKRTIPK 340 +DG+++ + +I K Sbjct: 184 LDGRRIRVDFSITK 197
>P62995:TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 - Homo sapiens (Human)| Length = 288 Score = 56.6 bits (135), Expect = 2e-07 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 33/169 (19%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FSK+G + + I+ D + RSRGF F+ F+ E ++ N Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKE-AKERAN 180 Query: 563 KIDLNGTQVEVKKAEPKKPSNPPHSL-------DSKPRRSPYADGYDG-------FASSY 700 ++L+G ++ V + K+P P + S RR Y GYD ++ SY Sbjct: 181 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 240 Query: 701 NNGG-------------------RLAPYKSTGFGTRPGSYSSAYVPGSY 790 GG +PY S G G R S S +Y P Y Sbjct: 241 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRG-GYRSRSRSRSYSPRRY 288 Score = 41.2 bits (95), Expect = 0.009 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVIEDNHV 298 GLS T+ +E F KYG I D I+ ++ +++ RGF F+ + D A + + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 299 IDGKQVEIKRTIPK 340 +DG+++ + +I K Sbjct: 184 LDGRRIRVDFSITK 197
>Q3ZBT6:TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 - Bos taurus (Bovine)| Length = 288 Score = 56.6 bits (135), Expect = 2e-07 Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 33/169 (19%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FSK+G + + I+ D + RSRGF F+ F+ E ++ N Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKE-AKERAN 180 Query: 563 KIDLNGTQVEVKKAEPKKPSNPPHSL-------DSKPRRSPYADGYDG-------FASSY 700 ++L+G ++ V + K+P P + S RR Y GYD ++ SY Sbjct: 181 GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYSRSY 240 Query: 701 NNGG-------------------RLAPYKSTGFGTRPGSYSSAYVPGSY 790 GG +PY S G G R S S +Y P Y Sbjct: 241 RGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRG-GYRSRSRSRSYSPRRY 288 Score = 41.2 bits (95), Expect = 0.009 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAIVDRVIEDNHV 298 GLS T+ +E F KYG I D I+ ++ +++ RGF F+ + D A + + Sbjct: 124 GLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGME 183 Query: 299 IDGKQVEIKRTIPK 340 +DG+++ + +I K Sbjct: 184 LDGRRIRVDFSITK 197
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 56.6 bits (135), Expect = 2e-07 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 24/202 (11%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++GGL + S E F + G +V+ + K+R T + +G+GF+ + D I+ Sbjct: 13 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 72 Query: 287 DNHVID--GKQVEIKRTIPKGAAPLKDFKT-KKIFVGGLPTALRDDEFKDFFSKFGKVVE 457 ++I GK + + K +A K+ IF+G L + + D FS FG +++ Sbjct: 73 IMNMIKLYGKPIRVN----KASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQ 128 Query: 458 -HEIICDHSTNRSRGFGFI---VFDAEKTVDELL---------------AKKGNKIDLNG 580 +I+ D T S+G+ FI FDA E + KK +K + +G Sbjct: 129 TPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHG 188 Query: 581 TQVE--VKKAEPKKPSNPPHSL 640 + E + P ++ PH L Sbjct: 189 SAAERLLAAQNPLSQADRPHQL 210
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 56.6 bits (135), Expect = 2e-07 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 + E++ +D A+ +F+ + KE F +YG ++++ + K +GFGF+ Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVR 245 Query: 251 YSDPAIVDRVIEDNH--VIDGKQVEIKRT---IPKGAAPLKDFKTKK-----------IF 382 Y + + D H IDGK + + R I + A + F+ + I+ Sbjct: 246 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 305 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 + L + D++ K+ FS FG + +++ + + +GFG + F +A K VDE+ Sbjct: 306 IKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Score = 49.3 bits (116), Expect = 3e-05 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 2/165 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + + F G + I ++ T+ P G+G++ + PA + + Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 287 DNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +I+GK + + P L+ IF+ L ++ + FS FG ++ Sbjct: 78 TMNFDLINGKPFRLMWSQPDDR--LRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 +++CD N S+G+ ++ FD+ + + N + LN QV V Sbjct: 136 KVVCD--DNGSKGYAYVHFDSLAAANRAIWHM-NGVRLNNRQVYV 177
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 56.6 bits (135), Expect = 2e-07 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 15/175 (8%) Frame = +2 Query: 89 QDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAI 268 QD +F+G LS + F +YG IV A ++ + + + +G+G++ + P Sbjct: 257 QDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEA 316 Query: 269 VDRVIEDNHV--IDGKQVEIKRTIPKGAAPLKDFKTK-------------KIFVGGLPTA 403 + N IDG+ V + + P+ A P + + +FVG L Sbjct: 317 AKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPSDTVFVGNLSFN 376 Query: 404 LRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 +D+ F G + + D + R +GFG++ F + + + G+ I Sbjct: 377 ATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEMNGHFI 431 Score = 47.8 bits (112), Expect = 1e-04 Identities = 25/88 (28%), Positives = 47/88 (53%) Frame = +2 Query: 365 KTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDEL 544 +T +FVG L + D F ++G +V +I D + RS+G+G++ F+ + Sbjct: 261 ETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAA 320 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKPSNP 628 +A G K +++G V + + P +P+NP Sbjct: 321 VAANGTK-EIDGRMVNLDLSNP-RPANP 346 Score = 37.7 bits (86), Expect = 0.10 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 +G Q + +F+G LS + FG G+I + + + + +GFG++T Sbjct: 354 AGNFGDQLSEPSDTVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVT 413 Query: 251 YSDPAIVDRVIEDN-HVIDGKQVEIKRTIPK 340 +SD + +E N H I G+ + + P+ Sbjct: 414 FSDIDSAKKCVEMNGHFIAGRPCRLDFSTPR 444
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 56.6 bits (135), Expect = 2e-07 Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 2/153 (1%) Frame = +2 Query: 95 GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 G A ++IG L + E F G I+ + ++ T++ + +I + PA + Sbjct: 7 GYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAE 66 Query: 275 RVIEDNH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 R ++ + VI G+ + I + + L+ +F+ L ++ + D FS FG Sbjct: 67 RALDTMNFEVIKGRPIRIMWS--QRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGN 124 Query: 449 VVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 ++ +++CD + SRG+GF+ F+ + + + Sbjct: 125 ILSCKVVCDE--HGSRGYGFVHFETHEAANRAI 155 Score = 53.9 bits (128), Expect = 1e-06 Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 13/185 (7%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L + F +G I+ ++ + H RG+GF+ + +R Sbjct: 96 SGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANR 153 Query: 278 VIE--DNHVIDGKQVEI-------KRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 I+ + +++ ++V + +R + GA K + +++ + D ++ Sbjct: 154 AIQTMNGMLLNDRKVFVGHFKSRRERELEYGA---KVMEFTNVYIKNFGEDMDDKRLREI 210 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKIDLNGTQVEVK 598 FS FG + +++ D S RSRGFGF+ + +A+K V E+ K ++NG + V Sbjct: 211 FSAFGNTLSVKVMMDDS-GRSRGFGFVNYGNHEEAQKAVSEMNGK-----EVNGRMIYVG 264 Query: 599 KAEPK 613 +A+ + Sbjct: 265 RAQKR 269 Score = 41.2 bits (95), Expect = 0.009 Identities = 28/153 (18%), Positives = 68/153 (44%), Gaps = 16/153 (10%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 +E F +G + +M + + + RGFGF+ Y + + + + + ++G+ + + R Sbjct: 208 REIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRA 266 Query: 332 ---IPKGAAPLKDFKTKK-----------IFVGGLPTALRDDEFKDFFSKFGKVVEHEII 469 I + + + F+ K ++V L + DD + F +G + +++ Sbjct: 267 QKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVM 326 Query: 470 CDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 + S+GFGF+ F + + + + + +I Sbjct: 327 TEGG--HSKGFGFVCFSSPEEATKAVTEMNGRI 357
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 55.8 bits (133), Expect = 4e-07 Identities = 35/177 (19%), Positives = 85/177 (48%), Gaps = 16/177 (9%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 ++ A +++ ++ +T+ F+E F K+G IV A + K+ K +GFGF+ Y Sbjct: 212 EETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHE 270 Query: 266 IVDRVIE--DNHVIDGKQVEIKRTIPKG--------------AAPLKDFKTKKIFVGGLP 397 + +E ++ ++G+++ + R K + ++ +FV L Sbjct: 271 DAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLD 330 Query: 398 TALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 ++ D++ ++ F+ +G + +++ + +S+GFGF+ F + + + +K +I Sbjct: 331 DSVDDEKLEEEFAPYGTITSAKVMRTEN-GKSKGFGFVCFSTPEEATKAITEKNQQI 386 Score = 52.0 bits (123), Expect = 5e-06 Identities = 39/175 (22%), Positives = 76/175 (43%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 +G Q S+A +++G L S + F G + + ++ T+ G+ ++ Sbjct: 26 TGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVN 85 Query: 251 YSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 ++D + IE + K + + L+ + IF+ L + + D Sbjct: 86 FNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDT 145 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 FS FG ++ +I D + +S+GFGF+ F+ E E + N + LNG ++ V Sbjct: 146 FSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDAL-NGMLLNGQEIYV 198
>Q8CFD1:DRBP1_RAT Developmentally-regulated RNA-binding protein 1 - Rattus norvegicus| (Rat) Length = 476 Score = 55.8 bits (133), Expect = 4e-07 Identities = 34/166 (20%), Positives = 84/166 (50%), Gaps = 19/166 (11%) Frame = +2 Query: 128 LSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH---- 295 +S+ TS +E+F +G+I D +++++HT++ +G F+ ++ + R +E+ H Sbjct: 32 ISKYTSESVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91 Query: 296 -VIDGKQVEIKRTIPKGAAPLKDFKTK---KIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 D K +++ + + +D + + +IFV +P + +++ ++ F +G + Sbjct: 92 GPNDTKPIKVFIAQSRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCS 150 Query: 464 IICDHSTNRSRGFGFI-----------VFDAEKTVDELLAKKGNKI 568 +I + T S+G G++ + + +++ LLA+ NK+ Sbjct: 151 VIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRALLAEPKNKV 196
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 55.5 bits (132), Expect = 5e-07 Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 6/178 (3%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + +FI L R + F +G I+ + + +G+GF+ + + Sbjct: 87 SGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNS-KGYGFVHFETEEAANT 145 Query: 278 VIE--DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIF----VGGLPTALRDDEFKDFFSK 439 I+ + +++GK+V + + IP+ + + K+F V D++ K+FF Sbjct: 146 SIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEP 205 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPK 613 +GK+ ++++ +S+GFGF+ F+ + + + K G + V +A+ K Sbjct: 206 YGKITSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262 Score = 51.6 bits (122), Expect = 7e-06 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 17/139 (12%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE---DNHVIDGKQVEIKR 328 KE+F YG+I +M + K +GFGF+ + + ++ + +GK + + R Sbjct: 200 KEFFEPYGKITSYKVMS-KEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVAR 258 Query: 329 TIPKGAAP------LKDFKTKK--------IFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 K ++ K K+ ++V L + DD + FS +G + ++ Sbjct: 259 AQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKV 318 Query: 467 ICDHSTNRSRGFGFIVFDA 523 + D RS+GFGF+ F+A Sbjct: 319 MTDEE-GRSKGFGFVCFNA 336
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 54.7 bits (130), Expect = 8e-07 Identities = 34/158 (21%), Positives = 72/158 (45%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + PA Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAA 116 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + +G Q ++ A ++ +++ LP ++ + E ++ FG+V Sbjct: 117 QKAVSALKA-NGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQV 167 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNK 565 + ++ D S+ SRG GF ++ + + ++ K Sbjct: 168 ISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNGK 204 Score = 50.8 bits (120), Expect = 1e-05 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 9/100 (9%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDEL 544 +++ GLP D + +GK+V + I D +TN+ +G+GF+ FD A+K V L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 A NG Q ++ K + + P SN P S+D + Sbjct: 124 KA--------NGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 155
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 54.7 bits (130), Expect = 8e-07 Identities = 35/158 (22%), Positives = 71/158 (44%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + PA Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 116 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + G Q ++ A ++ +++ LP ++ + E ++ FG+V Sbjct: 117 QKAVSALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQV 167 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNK 565 + I+ D S+ SRG GF ++ + + ++ K Sbjct: 168 ISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204 Score = 48.9 bits (115), Expect = 4e-05 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 9/100 (9%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDEL 544 +++ GLP D + +GK+V + I D +TN+ +G+GF+ FD A+K V L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 A +G Q ++ K + + P SN P S+D + Sbjct: 124 KA--------SGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 155
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 54.7 bits (130), Expect = 8e-07 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 23/190 (12%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +F+G L +E F + G + ++ E+ ++ RGFG++T+S V R +++ Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 293 HVIDGKQVEI--------KRTIPKG-----AAPLKDFKTKK---------IFVGGLPTAL 406 +G ++ + +T KG P K+ K KK + + L Sbjct: 66 TTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFKC 125 Query: 407 RDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGT 583 +D+ K F++FG V+E I + RGFGF+ F + ++ A KG N ++ G Sbjct: 126 SEDDLKTVFAQFGAVLEVN-IPRKPDGKMRGFGFVQF--KNLLEAGKALKGMNMKEIKGR 182 Query: 584 QVEVKKAEPK 613 V V A K Sbjct: 183 TVAVDWAVAK 192 Score = 48.1 bits (113), Expect = 8e-05 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 +FVG LP + R ++ ++ FS+ G V + ++ + + RGFG++ F D ++ + E+ Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYA 670 +G KI++ V KK K + P++ P A Sbjct: 66 TTFEGCKINVT---VAKKKLRNKTKEKGKNENSECPKKEPKA 104
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 54.3 bits (129), Expect = 1e-06 Identities = 34/158 (21%), Positives = 71/158 (44%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + PA Sbjct: 57 DQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAA 116 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + G Q ++ A ++ +++ LP ++ + E ++ FG+V Sbjct: 117 QKAVSALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQV 167 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNK 565 + ++ D S+ SRG GF ++ + + ++ K Sbjct: 168 ISTRVLRD-SSGTSRGVGFARMESTEKCEAVIGHFNGK 204 Score = 48.9 bits (115), Expect = 4e-05 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 9/100 (9%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFD----AEKTVDEL 544 +++ GLP D + +GK+V + I D +TN+ +G+GF+ FD A+K V L Sbjct: 64 LYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSAL 123 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 A +G Q ++ K + + P SN P S+D + Sbjct: 124 KA--------SGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 155
>Q924M5:BOLL_MOUSE Protein boule-like - Mus musculus (Mouse)| Length = 281 Score = 54.3 bits (129), Expect = 1e-06 Identities = 38/152 (25%), Positives = 74/152 (48%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 +IFVGG+ +++ + FFS++G V E +I+ D + S+G+GFI F+ ++ ++L + Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFITFETQEDAQKIL-Q 91 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKS 733 + K++ ++ + A K+ P S + Y G+ +Y+NG +A + + Sbjct: 92 EAEKLNYKDKKLNIGPAIRKQQVGIPRSSLMPAAGTMYLTTSTGYPYTYHNG--VAYFHT 149 Query: 734 TGFGTRPGSYSSAYVPGSYSSAYVPGSYSSAY 829 + P S+ S + S P AY Sbjct: 150 PEVTSVPPSWPSRSISSSPVMVAQPVYQQPAY 181 Score = 39.7 bits (91), Expect = 0.027 Identities = 15/71 (21%), Positives = 41/71 (57%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 ++F+GG+ +T+ +++F +YG + + I+ +R +G+GFIT+ +++++ Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQE 92 Query: 290 NHVIDGKQVEI 322 ++ K ++ Sbjct: 93 AEKLNYKDKKL 103
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 53.9 bits (128), Expect = 1e-06 Identities = 38/179 (21%), Positives = 78/179 (43%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + P+ Sbjct: 51 DQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + G Q ++ A ++ +++ LP ++ + E + FG+V Sbjct: 111 QKAVTALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQV 161 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNP 628 + I+ D ++ SRG GF ++ + + ++ NG ++ P PS+P Sbjct: 162 ISTRILRD-TSGTSRGVGFARMESTEKCEAIIT------HFNGKYIKTPPGVP-APSDP 212 Score = 47.0 bits (110), Expect = 2e-04 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +++ GL + D + +GK+V + I D +TN+ +G+GF+ FD+ K Sbjct: 58 LYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQ----KA 113 Query: 557 GNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 + +G Q ++ K + + P SN P S+D + Sbjct: 114 VTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 149
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 53.9 bits (128), Expect = 1e-06 Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 24/206 (11%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVD-----------------AVIMKERHTQKPRGFG 241 +F+G L + K +F +YG+I A I ++ H + Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINA 246 Query: 242 FITYSDPAIVDRVIEDN--HVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDD 415 ++ + + + + ++ N + DG ++ + A+ + +FVG LP + + Sbjct: 247 YVVFKEESAATQALKRNGAQIADGFRIRVDL-----ASETSSRDKRSVFVGNLPYKVEES 301 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 + F G ++ I+ D T +GFG+++F E T LA K N +L G ++ V Sbjct: 302 AIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLF--ENTDSVHLALKLNNSELMGRKLRV 359 Query: 596 KKAEPKKP-----SNPPHSLDSKPRR 658 ++ K+ SNP SKP++ Sbjct: 360 MRSVNKEKFKQQNSNPRLKNVSKPKQ 385
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 53.5 bits (127), Expect = 2e-06 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 2/101 (1%) Frame = +2 Query: 362 FKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDE 541 + + K+++GGL + KD FS F V E ++ + T RSRG+GF+ F +E + + Sbjct: 28 YMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANS 87 Query: 542 LLAKKGNKIDLNGTQVEVKKAE--PKKPSNPPHSLDSKPRR 658 ++ N +LNG + V A+ P P + S++ ++ Sbjct: 88 AISAM-NGQELNGFNISVNVAKDWPSLPLSLDESIEEAEKK 127 Score = 40.4 bits (93), Expect = 0.016 Identities = 16/50 (32%), Positives = 30/50 (60%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY 253 + K++IGGLS T + K+ F + + +A +M + T + RG+GF+ + Sbjct: 30 STKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNF 79
>Q8BHN5:DRBP1_MOUSE Developmentally-regulated RNA-binding protein 1 - Mus musculus| (Mouse) Length = 476 Score = 53.5 bits (127), Expect = 2e-06 Identities = 35/166 (21%), Positives = 83/166 (50%), Gaps = 19/166 (11%) Frame = +2 Query: 128 LSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH---- 295 +S+ TS +E F +G+I D +++++HT++ +G F+ ++ + R +E+ H Sbjct: 32 ISKHTSELVLRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCL 91 Query: 296 -VIDGKQVEIKRTIPKGAAPLKDFKTK---KIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 D K +++ + + +D + + +IFV +P + +++ ++ F +G + Sbjct: 92 GPSDTKPIKVFIAQSRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCS 150 Query: 464 IICDHSTNRSRGFGFI-----------VFDAEKTVDELLAKKGNKI 568 II + T S+G G++ + + +++ LLA+ NK+ Sbjct: 151 IIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFRALLAEPKNKV 196 Score = 34.3 bits (77), Expect = 1.1 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 2/128 (1%) Frame = +2 Query: 290 NHVIDGKQVEIKRTIP--KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 N Q++ +P K AP + +++FV P L D +D F +FG ++E Sbjct: 363 NAASQAPQIQTDVVLPSCKKKAPPETPVKERLFVVFNPHPLPLDVLEDIFCRFGNLIEVY 422 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLD 643 ++ + G++ + K+ +E + KI LNG +++V A+ + + Sbjct: 423 LV------SGKNVGYVKYADRKSANEAITTLHGKI-LNGVRLKVMLADSPRE-------E 468 Query: 644 SKPRRSPY 667 SK R+ Y Sbjct: 469 SKKRQRTY 476
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 53.5 bits (127), Expect = 2e-06 Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 S MK D A K+F+G + R K F ++G+I + ++K+R+T +G F+T Sbjct: 38 SDSMKDLD---AIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLT 94 Query: 251 YSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLK----DFKT----KKIFVGGLPTAL 406 Y D+ + + ++T+P A P++ D ++ +K+FVG L Sbjct: 95 Y--------CARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQ 146 Query: 407 RDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 ++E F FG + E ++ S+G F+ F + Sbjct: 147 SEEEVTSMFQAFGSIEECSVL-RGPDGSSKGCAFVKFSS 184 Score = 48.9 bits (115), Expect = 4e-05 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D+E F FG ++ ++ D +TN+S+ FGF+ FD + + A Sbjct: 403 LFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPSSAQTAIQAM 462 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 463 NGFQIGMKRLKVQLKR--PKDTTQP 485
>Q9IBD0:CELF1_DANRE CUG-BP- and ETR-3-like factor 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 501 Score = 53.5 bits (127), Expect = 2e-06 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 GS + Q + KMF+G + R S +E F YG + + ++++R P+ G Sbjct: 3 GSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCC 62 Query: 242 FITY---SDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+TY + + ++ G I+ P + + +K+FVG + + Sbjct: 63 FVTYYTRKSALEAQNALHNMKILPGMHHPIQMK-PADSEKNNAVEDRKLFVGMISKKCNE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS +G++ E I+ SRG F+ F A + + + G + Sbjct: 122 NDIRLMFSPYGQIEECRIL-RGPDGLSRGCAFVTFTARQMAQSAIKSMHQSQTMEGCSSP 180 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 181 IVVKFADTQK 190 Score = 42.0 bits (97), Expect = 0.005 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + Sbjct: 418 LFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQAAIQ-- 475 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 476 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 500
>Q13595:TRA2A_HUMAN Transformer-2 protein homolog - Homo sapiens (Human)| Length = 282 Score = 53.1 bits (126), Expect = 2e-06 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 7/161 (4%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FS++G + ++ D T RSRGF F+ F+ E + ++ N Sbjct: 123 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAM-ERAN 181 Query: 563 KIDLNGTQVEVKKAEPKKPSNP-PHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTG 739 ++L+G ++ V + K+ P P +P S G G G R Y G Sbjct: 182 GMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRG 241 Query: 740 FG---TRPGSYSSAY---VPGSYSSAYVPGSYSSAYVPGDY 844 + R Y Y P Y S Y S S +Y P Y Sbjct: 242 YDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY 282 Score = 34.7 bits (78), Expect = 0.88 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE--DNHV 298 GLS T+ +E F +YG + ++ ++ T + RGF F+ + +E + Sbjct: 125 GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGME 184 Query: 299 IDGKQVEIKRTIPKGA 346 +DG+++ + +I K A Sbjct: 185 LDGRRIRVDYSITKRA 200
>O43251:RBM9_HUMAN RNA-binding protein 9 - Homo sapiens (Human)| Length = 390 Score = 53.1 bits (126), Expect = 2e-06 Identities = 32/103 (31%), Positives = 53/103 (51%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 K++ V +P RD + + F +FGK+++ EII + S+GFGF+ F+ D Sbjct: 121 KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII--FNERGSKGFGFVTFENSADADRARE 178 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGY 679 K L+GT VE +K E + + +K +PYA+G+ Sbjct: 179 K------LHGTVVEGRKIEVNNAT--ARVMTNKKMVTPYANGW 213 Score = 42.4 bits (98), Expect = 0.004 Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 3/58 (5%) Frame = +2 Query: 158 KEYFGKYGEIVDA-VIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEI 322 ++ FG++G+I+D +I ER + +GFGF+T+ + A DR E H V++G+++E+ Sbjct: 138 RQMFGQFGKILDVEIIFNERGS---KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 192
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 53.1 bits (126), Expect = 2e-06 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 + + LS + T +E F K + + + K +G+ FI ++ + Sbjct: 490 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 545 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 + I+G+ + ++ P+G+ + +K +FV GL ++ K+ F V I Sbjct: 546 NKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKE---SFDGSVRARI 602 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVEVKKAEPK 613 + D T S+GFGF+ F++E+ D AK+ + +++G +V + A+PK Sbjct: 603 VTDRETGSSKGFGFVDFNSEE--DAKAAKEAMEDGEIDGNKVTLDWAKPK 650 Score = 43.5 bits (101), Expect = 0.002 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 +A +F+G L+ S K D ++ R R FG++ + +++ Sbjct: 307 TAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVR-IGMTRKFGYVDFESAEDLEKA 365 Query: 281 IEDNHVIDGKQV---EIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 +E + G +V EIK PKG K+ + + LP + DE K+ F Sbjct: 366 LE----LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA-- 419 Query: 452 VEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 EI +S+G +I F DAEKT +E K+G +ID Sbjct: 420 ---EIRLVSKDGKSKGIAYIEFKTEADAEKTFEE---KQGTEID 457
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 53.1 bits (126), Expect = 2e-06 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 + + LS + T +E F K + + + K +G+ FI ++ + Sbjct: 489 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 544 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 + I+G+ + ++ P+G+ + +K +FV GL ++ K+ F V I Sbjct: 545 NKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKE---SFDGSVRARI 601 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVEVKKAEPK 613 + D T S+GFGF+ F++E+ D AK+ + +++G +V + A+PK Sbjct: 602 VTDRETGSSKGFGFVDFNSEE--DAKAAKEAMEDGEIDGNKVTLDWAKPK 649 Score = 43.5 bits (101), Expect = 0.002 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 +A +F+G L+ S K D ++ R R FG++ + +++ Sbjct: 306 TAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVR-IGMTRKFGYVDFESAEDLEKA 364 Query: 281 IEDNHVIDGKQV---EIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 +E + G +V EIK PKG K+ + + LP + DE K+ F Sbjct: 365 LE----LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA-- 418 Query: 452 VEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 EI +S+G +I F DAEKT +E K+G +ID Sbjct: 419 ---EIRLVSKDGKSKGIAYIEFKTEADAEKTFEE---KQGTEID 456
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 53.1 bits (126), Expect = 2e-06 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 + + LS + T +E F K + + + K +G+ FI ++ + Sbjct: 488 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSC 543 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 + I+G+ + ++ P+G+ + +K +FV GL ++ K+ F V I Sbjct: 544 NKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKE---SFDGSVRARI 600 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVEVKKAEPK 613 + D T S+GFGF+ F++E+ D AK+ + +++G +V + A+PK Sbjct: 601 VTDRETGSSKGFGFVDFNSEE--DAKAAKEAMEDGEIDGNKVTLDWAKPK 648 Score = 43.5 bits (101), Expect = 0.002 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 +A +F+G L+ S K D ++ R R FG++ + +++ Sbjct: 305 TAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVR-IGMTRKFGYVDFESAEDLEKA 363 Query: 281 IEDNHVIDGKQV---EIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 +E + G +V EIK PKG K+ + + LP + DE K+ F Sbjct: 364 LE----LTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAA-- 417 Query: 452 VEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 EI +S+G +I F DAEKT +E K+G +ID Sbjct: 418 ---EIRLVSKDGKSKGIAYIEFKTEADAEKTFEE---KQGTEID 455
>P37838:NOP4_YEAST Nucleolar protein 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 685 Score = 53.1 bits (126), Expect = 2e-06 Identities = 30/84 (35%), Positives = 44/84 (52%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 K +FV +P + D++ DFFS F + +H ++ + RSRGFGF+ F E E LA Sbjct: 26 KTLFVRSIPQDVTDEQLADFFSNFAPI-KHAVVVKDTNKRSRGFGFVSFAVEDDTKEALA 84 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPS 622 K K NG + V A+ + S Sbjct: 85 -KARKTKFNGHILRVDIAKRRDRS 107 Score = 38.5 bits (88), Expect = 0.061 Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 55/185 (29%) Frame = +2 Query: 158 KEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEIKRT 331 K+ FG+YG +V+A I ++R K GF F+T + +E+ IDG++V + Sbjct: 165 KKIFGRYGTVVEATIPRKRDG-KLCGFAFVTMKKISNCRIALENTKDLKIDGRKVAVDFA 223 Query: 332 IPKG---------------------------------------------AAPLKDFKTK- 373 + K A+ K+ K K Sbjct: 224 VQKNRWEDYKKAQPEMNDKDDNESGNEDAEENHDDEEDENEEEDRQVDQASKNKESKRKA 283 Query: 374 -------KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKT 532 +FV +P ++ FSKFG V + D ST ++G F+ F + T Sbjct: 284 QNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYT 343 Query: 533 VDELL 547 +E + Sbjct: 344 YNECI 348
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 53.1 bits (126), Expect = 2e-06 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYADGYD 682 T + + N + +G + V A +K SL SPY D D Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID 120 Score = 40.0 bits (92), Expect = 0.021 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 53.1 bits (126), Expect = 2e-06 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYADGYD 682 T + + N + +G + V A +K SL SPY D D Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID 120 Score = 40.0 bits (92), Expect = 0.021 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
>Q8WP23:BOLL_MACFA Protein boule-like - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 283 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/112 (25%), Positives = 59/112 (52%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 +IFVGG+ + + + FFS++G V E +I+ D + S+G+GF+ F+ ++ ++L + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKIL-Q 91 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNG 709 + K++ ++ + A K+ P S + Y G+ +Y+NG Sbjct: 92 EAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPYTYHNG 143 Score = 39.3 bits (90), Expect = 0.036 Identities = 14/71 (19%), Positives = 41/71 (57%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 ++F+GG+ +T+ +++F +YG + + I+ +R +G+GF+T+ +++++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 290 NHVIDGKQVEI 322 ++ K ++ Sbjct: 93 AEKLNYKDKKL 103
>Q8N9W6:BOLL_HUMAN Protein boule-like - Homo sapiens (Human)| Length = 283 Score = 53.1 bits (126), Expect = 2e-06 Identities = 29/112 (25%), Positives = 59/112 (52%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 +IFVGG+ + + + FFS++G V E +I+ D + S+G+GF+ F+ ++ ++L + Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKIL-Q 91 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNG 709 + K++ ++ + A K+ P S + Y G+ +Y+NG Sbjct: 92 EAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPYTYHNG 143 Score = 39.3 bits (90), Expect = 0.036 Identities = 14/71 (19%), Positives = 41/71 (57%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 ++F+GG+ +T+ +++F +YG + + I+ +R +G+GF+T+ +++++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 290 NHVIDGKQVEI 322 ++ K ++ Sbjct: 93 AEKLNYKDKKL 103
>Q8VC70:RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 - Mus| musculus (Mouse) Length = 383 Score = 52.8 bits (125), Expect = 3e-06 Identities = 35/166 (21%), Positives = 72/166 (43%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFI 247 G G D S ++I GL T+ + YG+IV + ++ T K +G+GF+ Sbjct: 45 GGGGSGGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFV 104 Query: 248 TYSDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKD 427 + P+ + + G Q ++ A ++ +++ LP ++ + E + Sbjct: 105 DFDSPSSAQKAVTALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELEG 155 Query: 428 FFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNK 565 FG+V+ I+ D ++ SRG GF ++ + + ++ K Sbjct: 156 MLKPFGQVISTRILRD-TSGASRGVGFARMESTEKCEAIITHFNGK 200 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +++ GL D + +GK+V + I D +TN+ +G+GF+ FD+ + K Sbjct: 60 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQ----KA 115 Query: 557 GNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 + +G Q ++ K + + P SN P S+D + Sbjct: 116 VTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 151
>Q15434:RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 - Homo| sapiens (Human) Length = 407 Score = 52.8 bits (125), Expect = 3e-06 Identities = 38/179 (21%), Positives = 78/179 (43%) Frame = +2 Query: 92 DGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV 271 D S ++I GL T+ + YG+IV + ++ T K +G+GF+ + P+ Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110 Query: 272 DRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKV 451 + + G Q ++ A ++ +++ LP ++ + E + FG+V Sbjct: 111 QKAVTALKA-SGVQAQM--------AKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQV 161 Query: 452 VEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNP 628 + I+ D ++ SRG GF ++ + + ++ NG ++ P PS+P Sbjct: 162 ISTRILRD-TSGTSRGVGFARMESTEKCEAIIT------HFNGKYIKTPPGVP-APSDP 212 Score = 46.2 bits (108), Expect = 3e-04 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +++ GL D + +GK+V + I D +TN+ +G+GF+ FD+ K Sbjct: 58 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQ----KA 113 Query: 557 GNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 + +G Q ++ K + + P SN P S+D + Sbjct: 114 VTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQ 149
>Q4R535:CELF4_MACFA CUG-BP- and ETR-3-like factor 4 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 474 Score = 52.8 bits (125), Expect = 3e-06 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 3/151 (1%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 MK D A K+FIG + R K F ++G+I + ++K+R T +G F+TY + Sbjct: 48 MKDHD---AIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCE 104 Query: 260 ---PAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 + + + G + R I A + +K+FVG L +D+ + Sbjct: 105 RESALKAQSALHEQKTLPG----MNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRL 160 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 F FG + E I+ N S+G F+ + + Sbjct: 161 FEAFGNIEECTILRGPDGN-SKGCAFVKYSS 190 Score = 44.3 bits (103), Expect = 0.001 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 P+KD K+F+G +P L + + K F +FGK+ E ++ D T +G F+ + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTY 102
>P26368:U2AF2_HUMAN Splicing factor U2AF 65 kDa subunit - Homo sapiens (Human)| Length = 475 Score = 52.4 bits (124), Expect = 4e-06 Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 9/191 (4%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A+M +GGL++ + T + F I + ++ R Sbjct: 171 AQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPH 230 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 D + G +P + + K+F+GGLP L DD+ K+ + FG + + Sbjct: 231 DYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNL 290 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPS-------- 622 + D +T S+G+ F + D+ +A LNG Q+ KK ++ S Sbjct: 291 VKDSATGLSKGYAFCEYVDINVTDQAIA------GLNGMQLGDKKLLVQRASVGAKNATL 344 Query: 623 -NPPHSLDSKP 652 +PP +++ P Sbjct: 345 VSPPSTINQTP 355 Score = 37.0 bits (84), Expect = 0.18 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 SA K+FIGGL + KE +G + ++K+ T +G+ F Y D + D+ Sbjct: 257 SAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQA 316 Query: 281 IEDNHVIDGKQVEIKRTIPKGAA 349 I ++G Q+ K+ + + A+ Sbjct: 317 IAG---LNGMQLGDKKLLVQRAS 336
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 52.4 bits (124), Expect = 4e-06 Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 19/187 (10%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVD-----------------AVIMKERHTQKPRGFG 241 +F+G L + K +F +YG++ A I ++ H + Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSINA 250 Query: 242 FITYSDPAIVDRVIEDN--HVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDD 415 ++ + D + + ++ N + +G ++ + A+ + +FVG LP + D Sbjct: 251 YVVFKDESAAAKALQRNGAQIAEGFRIRVDL-----ASETASRDKRSVFVGNLPYKIEDS 305 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 ++ F G +V I+ + T RGFG+++F+ V LA K N +L G ++ V Sbjct: 306 ALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH--LALKLNNSELMGRKLRV 363 Query: 596 KKAEPKK 616 ++ K+ Sbjct: 364 MRSVNKE 370
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 52.4 bits (124), Expect = 4e-06 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 5/178 (2%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS--DPAI- 268 A A K+FIG + R K F ++G+I + ++K+++T +G F+TY + A+ Sbjct: 4 ADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESALK 63 Query: 269 VDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 + + + G + R I A + +K+FVG L L D + + F FG Sbjct: 64 AQNALHEQKTLPG----MNRPIQVKPADSEGRGDRKLFVGMLGKQLSDADVRKMFEPFGS 119 Query: 449 VVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQVEVKKAEPKK 616 + E ++ S+G F+ + + ++ L G + + VK A+ +K Sbjct: 120 IEECTVL-RGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEK 176 Score = 48.9 bits (115), Expect = 4e-05 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 IF+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + A Sbjct: 369 IFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 428 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 429 NGFQIGMKRLKVQLKR--PKDANRP 451 Score = 43.1 bits (100), Expect = 0.002 Identities = 20/84 (23%), Positives = 46/84 (54%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 +++Q++G +FI L ++ + + F +G ++ A + +R T + + FGF+++ Sbjct: 357 QLQQREGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFD 416 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKR 328 +PA I+ ++G Q+ +KR Sbjct: 417 NPASAQAAIQ---AMNGFQIGMKR 437 Score = 42.0 bits (97), Expect = 0.005 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2 Query: 353 LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKT 532 +K+ K+F+G +P L + + K F +FGK+ E +I D T +G F+ + A ++ Sbjct: 1 MKEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARES 60
>Q6PF35:CEL1B_XENLA CUG-BP- and ETR-3-like factor 1-B - Xenopus laevis (African clawed| frog) Length = 489 Score = 52.4 bits (124), Expect = 4e-06 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 7/156 (4%) Frame = +2 Query: 71 SGEMKQQD--GASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG- 241 +G M D + + KMF+G + R S +E F +YG + + ++++R P+ G Sbjct: 2 NGTMDHPDHPDSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGC 61 Query: 242 -FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALR 409 FIT Y+ A ++ + + V+ G I+ P + + +K+F+G + Sbjct: 62 CFITFYTRKAALEAQNALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMVSKKCN 120 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 +++ + FS+FG++ E I+ SRG FI F Sbjct: 121 ENDIRTLFSQFGQIEESRIL-RGPDGMSRGCAFITF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG +V ++ D TN S+ FGFI +D + + Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFISYDNPVSAQAAIQ-- 463 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 464 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 488 Score = 41.6 bits (96), Expect = 0.007 Identities = 23/81 (28%), Positives = 41/81 (50%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 Q++G A +FI L ++ + F +G IV A + ++ T + FGFI+Y +P Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSKCFGFISYDNPV 456 Query: 266 IVDRVIEDNHVIDGKQVEIKR 328 I+ ++G Q+ +KR Sbjct: 457 SAQAAIQS---MNGFQIGMKR 474
>Q9NWB1:A2BP1_HUMAN Ataxin-2-binding protein 1 - Homo sapiens (Human)| Length = 397 Score = 52.4 bits (124), Expect = 4e-06 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 K++ V +P RD + + F +FGK+++ EII + S+GFGF+ F+ D Sbjct: 117 KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII--FNERGSKGFGFVTFENSADADRARE 174 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYD-------GFASSYNNG 709 K L+GT VE +K E + + +K +PY +G+ ++ + G Sbjct: 175 K------LHGTVVEGRKIEVNNAT--ARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAG 226 Query: 710 GRL---APYKSTGFGTRPGS--YSSAYVPGSYSSAYVPGSYSSAYVPG 838 L A + + + P S Y+SA Y +A +Y A++ G Sbjct: 227 TVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRG 274 Score = 42.4 bits (98), Expect = 0.004 Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 3/58 (5%) Frame = +2 Query: 158 KEYFGKYGEIVDA-VIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEI 322 ++ FG++G+I+D +I ER + +GFGF+T+ + A DR E H V++G+++E+ Sbjct: 134 RQMFGQFGKILDVEIIFNERGS---KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 188
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 52.0 bits (123), Expect = 5e-06 Identities = 50/252 (19%), Positives = 102/252 (40%), Gaps = 2/252 (0%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 ++D A +++G L + + E + G +V+ I ++R GFGF + Sbjct: 4 REDRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQ 63 Query: 266 IVDRVIEDNHVID--GKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSK 439 V+ + + + GK + + R + +FVG L + + D FS Sbjct: 64 DVEYACQILNQVKLFGKPIRVNRASQDRG--VNTLIGANLFVGNLDPLVDERVLYDTFSA 121 Query: 440 FGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKP 619 G++V+ + RS+G+GF+ +D+ +T D + N+ +N KP Sbjct: 122 LGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMN------------KP 169 Query: 620 SNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSA 799 ++ + + + D + ++ ++A T T P +S A P S+A Sbjct: 170 ITVSYAFKREGKGERHGDIAERKLAAAAKKNKVA---VTPQSTLPPGFSPA-TPAPTSAA 225 Query: 800 YVPGSYSSAYVP 835 P + ++ +P Sbjct: 226 NTPATIAATSIP 237
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 52.0 bits (123), Expect = 5e-06 Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 3/237 (1%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S ++I GL T+ + YG+IV + +++T + +G+GF+ + PA + Sbjct: 58 SKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKA 117 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +G Q ++ A ++ +++ LP ++ + E ++ FG V+ Sbjct: 118 VASLKA-NGVQAQM--------AKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVIST 168 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D + SRG GF ++ + + ++ NG + K P P+ Sbjct: 169 RILRD-ANGVSRGVGFARMESTEKCEVVIQ------HFNGKYL---KTPPGIPA------ 212 Query: 641 DSKPRRSPYADGYD---GFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAY 802 S+P +ADG S Y GR P + ++A G YSS Y Sbjct: 213 PSEPLLCKFADGGQKKRQNQSKYTQNGRPWPREGEAGMALTYDPTAAIQNGFYSSPY 269
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 52.0 bits (123), Expect = 5e-06 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +++ GLP D + +GK+V + I D +TN+ +G+GF+ FD+ + +A Sbjct: 58 LYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVA-- 115 Query: 557 GNKIDLNGTQVEVKKAEPKKP-----SNPPHSLDSK 649 + NG Q ++ K + + P SN P S+D + Sbjct: 116 --SLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQ 149 Score = 50.1 bits (118), Expect = 2e-05 Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 3/237 (1%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S ++I GL T+ + YG+IV + +++T + +G+GF+ + PA + Sbjct: 54 SKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKA 113 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +G Q ++ A ++ +++ LP ++ + E ++ FG V+ Sbjct: 114 VASLKA-NGVQAQM--------AKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVIST 164 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D + SRG GF ++ + + ++ NG + K P P+ Sbjct: 165 RILRD-ANGVSRGVGFARMESTEKCEVVIQ------HFNGKYL---KTPPGIPA------ 208 Query: 641 DSKPRRSPYADGYD---GFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAY 802 S+P +ADG S + GR P + ++A G YSS Y Sbjct: 209 PSEPLLCKFADGGQKKRQGQSKHTQNGRPWPREGEAGMALTYDPTAALQNGFYSSPY 265
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 52.0 bits (123), Expect = 5e-06 Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 3/237 (1%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S ++I GL T+ + YG+IV + +++T + +G+GF+ + PA + Sbjct: 59 SKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKA 118 Query: 281 IEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + +G Q ++ A ++ +++ LP ++ + E ++ FG V+ Sbjct: 119 VASLKA-NGVQAQM--------AKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVIST 169 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D + SRG GF ++ + + ++ NG + K P P+ Sbjct: 170 RILRD-ANGVSRGVGFARMESTEKCEVVIQ------HFNGKYL---KTPPGIPA------ 213 Query: 641 DSKPRRSPYADGYD---GFASSYNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAY 802 S+P +ADG S Y GR P + ++A G YSS Y Sbjct: 214 PSEPLLCKFADGGQKKRQNQSKYTQNGRPWPREGEAGMALTYDPTAAIQNGFYSSPY 270
>Q9JJ43:A2BP1_MOUSE Ataxin-2-binding protein 1 - Mus musculus (Mouse)| Length = 396 Score = 52.0 bits (123), Expect = 5e-06 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 12/168 (7%) Frame = +2 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA 550 K++ V +P RD + + F +FGK+++ EII + S+GFGF+ F+ D Sbjct: 116 KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII--FNERGSKGFGFVTFENSADADRARE 173 Query: 551 KKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYD-------GFASSYNNG 709 K L+GT VE +K E + + +K +PY +G+ ++ + G Sbjct: 174 K------LHGTVVEGRKIEVNNAT--ARVMTNKKTVNPYTNGWKLNPVVGAVYSPDFYAG 225 Query: 710 GRL---APYKSTGFGTRPGS--YSSAYVPGSYSSAYVPGSYSSAYVPG 838 L A + + + P S Y+SA Y +A +Y A++ G Sbjct: 226 TVLLCQANQEGSSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGAHLRG 273 Score = 42.4 bits (98), Expect = 0.004 Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 3/58 (5%) Frame = +2 Query: 158 KEYFGKYGEIVDA-VIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH--VIDGKQVEI 322 ++ FG++G+I+D +I ER + +GFGF+T+ + A DR E H V++G+++E+ Sbjct: 133 RQMFGQFGKILDVEIIFNERGS---KGFGFVTFENSADADRAREKLHGTVVEGRKIEV 187
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 51.6 bits (122), Expect = 7e-06 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 31/214 (14%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +F+G L +E F + G + ++ E+ ++ RGFG++T+S V R +++ Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 293 HVIDGKQVEI-------------KRTIPKGAAPLKDFKTKK---------IFVGGLPTAL 406 +G ++++ R +P K+ K KK + + L Sbjct: 66 TTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKC 125 Query: 407 RDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQ 586 +D+ K F+ +G V+E I + RGF F+ F + L K N ++ G Sbjct: 126 SEDDLKAVFTHYGTVLEVN-IPKKPDGKMRGFAFVQFKNLLEAGKAL-KGANMKEIKGRT 183 Query: 587 VEV---------KKAEPKKPSNPPHSLDSKPRRS 661 V V K A+ S D KP+ S Sbjct: 184 VAVDWAVAKDKYKDAQHASAPGVKKSSDRKPKES 217 Score = 51.6 bits (122), Expect = 7e-06 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 +FVG LP + R D+ ++ FS+ G V + ++ + + RGFG++ F D ++ + E+ Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 545 LAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSP 664 +G KID+ V KK K + P++ P Sbjct: 66 TTFEGCKIDVT---VAKKKLRNKSKETRKNENAESPKKEP 102 Score = 31.2 bits (69), Expect = 9.7 Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 5/122 (4%) Frame = +2 Query: 254 SDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFF 433 S+ + D+ ED V + K+ ++ + +G K +F+ L ++ + Sbjct: 295 SESSAEDQEDEDVPVSEKKKRKLPSDVTEG---------KTVFIRNLSFDSEEEALGEVL 345 Query: 434 SKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLA-----KKGNKIDLNGTQVEVK 598 +FG + ++ T S+G F F ++ + LA +G + L+G Q++V Sbjct: 346 QQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASPEAEGGGLKLDGRQLKVD 405 Query: 599 KA 604 A Sbjct: 406 LA 407
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 51.6 bits (122), Expect = 7e-06 Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 5/172 (2%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQ--KPRGFGFITYSDPAIVDRVIE 286 + + LS + T +E F K A +K Q K +G+ FI ++ + Sbjct: 488 LVLSNLSYSATEETLQEVFEK------ATFIKVPQNQQGKSKGYAFIEFASFEDAKEALN 541 Query: 287 --DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 + I+G+ + ++ P+G+ + +K +FV GL ++ K+ F V Sbjct: 542 SCNKMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGS---VRA 598 Query: 461 EIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVEVKKAEPK 613 I+ D T S+GFGF+ F++E+ D AK+ + +++G +V + A+PK Sbjct: 599 RIVTDRETGSSKGFGFVDFNSEE--DAKAAKEAMEDGEIDGNKVTLDWAKPK 648 Score = 40.0 bits (92), Expect = 0.021 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 7/172 (4%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 +++ + + +FIG L+ S+ K + D ++ R T R FG++ + Sbjct: 298 KVEGSESTTPFNLFIGNLNPNKSVAELKVAISEPFAKNDLAVVDVR-TGTNRKFGYVDFE 356 Query: 257 DPAIVDRVIEDNHVIDGKQV---EIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKD 427 +++ +E + G +V EIK PKG K + + L + +DE K+ Sbjct: 357 SAEDLEKALE----LTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKE 412 Query: 428 FFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 F EI +S+G +I F DAEK ++E K+G +ID Sbjct: 413 VFED-----ALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEE---KQGAEID 456
>Q8IUH3:DRBP1_HUMAN Developmentally-regulated RNA-binding protein 1 - Homo sapiens| (Human) Length = 476 Score = 51.2 bits (121), Expect = 9e-06 Identities = 29/136 (21%), Positives = 70/136 (51%), Gaps = 8/136 (5%) Frame = +2 Query: 128 LSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDNH---- 295 +S+ T +E F +G+I D +++++HT++ +G F+ ++ + R +E+ H Sbjct: 32 ISKYTPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCL 91 Query: 296 -VIDGKQVEIKRTIPKGAAPLKDFKTK---KIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 D K +++ + + +D + + +IFV +P + +++ ++ F +G + Sbjct: 92 GPNDTKPIKVFIAQSRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCS 150 Query: 464 IICDHSTNRSRGFGFI 511 II + T S+G G++ Sbjct: 151 IIKNKVTGESKGLGYV 166 Score = 32.0 bits (71), Expect = 5.7 Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 311 QVEIKRTIP--KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHST 484 Q++ +P K AP + +++F+ P L D +D F +FG ++E ++ Sbjct: 370 QIQTDVVLPSCKKKAPAETPVKERLFIVFNPHPLPLDVLEDIFCRFGNLIEVYLV----- 424 Query: 485 NRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAE-PKKPSN 625 + G+ + + ++ +A KI LNG +++V A+ P++ SN Sbjct: 425 -SGKNVGYAKYADRISANDAIATLHGKI-LNGVRLKVMLADSPREESN 470 Score = 31.2 bits (69), Expect = 9.7 Identities = 17/73 (23%), Positives = 36/73 (49%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 SG + + ++F+ + + + +E F YG+I I+K + T + +G G++ Sbjct: 109 SGSHRDVEDEELTRIFVM-IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVR 167 Query: 251 YSDPAIVDRVIED 289 Y P+ + IE+ Sbjct: 168 YLKPSQAAQAIEN 180
>O57437:DAZLA_XENLA Deleted in azoospermia-like-A - Xenopus laevis (African clawed| frog) Length = 286 Score = 51.2 bits (121), Expect = 9e-06 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF---- 517 P + +FVGG+ + + E +DFF++FG V E +II D T S+G+GFI F Sbjct: 26 PEGEIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEV 84 Query: 518 DAEKTVDELLAKKGNKIDL 574 D +K V ++ G K+ L Sbjct: 85 DVQKIVKSQISFHGKKLKL 103 Score = 42.0 bits (97), Expect = 0.005 Identities = 19/76 (25%), Positives = 43/76 (56%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +F+GG+ +++F ++G + + I+ +R T +G+GFI++SD V ++++ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEVDVQKIVKSQ 93 Query: 293 HVIDGKQVEIKRTIPK 340 GK++++ I K Sbjct: 94 ISFHGKKLKLGPAIRK 109
>Q28HE9:CELF1_XENTR CUG-BP- and ETR-3-like factor 1 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 490 Score = 51.2 bits (121), Expect = 9e-06 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 5/141 (3%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG--FIT-YSDPAIVD-- 274 KMF+G + R S +E F +YG + + ++++R P+ G FIT Y+ A ++ Sbjct: 17 KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAALEAQ 76 Query: 275 RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVV 454 + + V+ G I+ P + + +K+FVG + +++ + FS+FG++ Sbjct: 77 NALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQIE 135 Query: 455 EHEIICDHSTNRSRGFGFIVF 517 E I+ SRG F+ F Sbjct: 136 ESRIL-RGPDGMSRGCAFVTF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 407 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 464 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 465 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 489 Score = 31.6 bits (70), Expect = 7.4 Identities = 19/101 (18%), Positives = 48/101 (47%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + ++ + K+F+G +S++ + + F ++G+I ++ I++ RG F+T++ Sbjct: 98 DSEKNNAVEDRKLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGPDGMS-RGCAFVTFT 156 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKI 379 ++ I+ H + + K A KD + K++ Sbjct: 157 TRSMAQMAIKAMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>Q4QQT3:CELF1_RAT CUG-BP- and ETR-3-like factor 1 - Rattus norvegicus (Rat)| Length = 487 Score = 51.2 bits (121), Expect = 9e-06 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 5/155 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S +E F +YG + + I+++R P+ G Sbjct: 3 GTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCC 62 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + V+ G I+ P + + +K+F+G + + Sbjct: 63 FVTFYTRKAALEAQNALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 ++ + FS FG++ E I+ SRG F+ F Sbjct: 122 NDIRVMFSSFGQIEECRIL-RGPDGLSRGCAFVTF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 404 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 461 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 462 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 486
>P28659:CELF1_MOUSE CUG-BP- and ETR-3-like factor 1 - Mus musculus (Mouse)| Length = 486 Score = 51.2 bits (121), Expect = 9e-06 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 5/155 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S +E F +YG + + I+++R P+ G Sbjct: 3 GTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCC 62 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + V+ G I+ P + + +K+F+G + + Sbjct: 63 FVTFYTRKAALEAQNALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 ++ + FS FG++ E I+ SRG F+ F Sbjct: 122 NDIRVMFSSFGQIEECRIL-RGPDGLSRGCAFVTF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 460 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 461 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 485
>P26369:U2AF2_MOUSE Splicing factor U2AF 65 kDa subunit - Mus musculus (Mouse)| Length = 475 Score = 50.8 bits (120), Expect = 1e-05 Identities = 37/165 (22%), Positives = 65/165 (39%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A+M +GGL++ + T + F I + ++ R Sbjct: 171 AQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPH 230 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 D + G +P + + K+F+GGLP L DD+ K+ + FG + + Sbjct: 231 DYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNL 290 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKK 601 + D +T S+G+ F + D+ +A LNG Q+ KK Sbjct: 291 VKDSATGLSKGYAFCEYVDINVTDQAIA------GLNGMQLGDKK 329 Score = 37.0 bits (84), Expect = 0.18 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 SA K+FIGGL + KE +G + ++K+ T +G+ F Y D + D+ Sbjct: 257 SAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQA 316 Query: 281 IEDNHVIDGKQVEIKRTIPKGAA 349 I ++G Q+ K+ + + A+ Sbjct: 317 IAG---LNGMQLGDKKLLVQRAS 336
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 50.8 bits (120), Expect = 1e-05 Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 2/142 (1%) Frame = +2 Query: 107 AKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 A +++G L + G + F ++ + + K+ + + +G+ + + IE Sbjct: 24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83 Query: 287 --DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 +N +++GK + + ++ A + +FV LP ++ + +D F KFG +V Sbjct: 84 KKNNSLLNGKMIRVMWSVR--APDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSC 141 Query: 461 EIICDHSTNRSRGFGFIVFDAE 526 + + +SRG+GF+ F+ E Sbjct: 142 K-VATLEDGKSRGYGFVQFEQE 162 Score = 48.1 bits (113), Expect = 8e-05 Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 2/138 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 +F+ L + ++ F K+G IV + K RG+GF+ + I+ Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 ++ ++ K++ + + + K + K +++ L + +D ++ F++FGK+V I Sbjct: 173 NSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAI 232 Query: 467 ICDHSTNRSRGFGFIVFD 520 D + RG+ F+ FD Sbjct: 233 AKDEN-RLCRGYAFVNFD 249
>Q99069:GRP1_SORBI Glycine-rich RNA-binding protein 1 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 142 Score = 50.8 bits (120), Expect = 1e-05 Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 9/120 (7%) Frame = +2 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEP 610 FS +G+V+E +II D T RSRGFGF+ F E+ + + K +L+G + V +A+ Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGK-ELDGRNITVNEAQS 65 Query: 611 KKP---------SNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKSTGFGTRPGSY 763 + RR GY G Y GG Y G+G G Y Sbjct: 66 RGGRGGGGGGGYGGGRGGGGGYGRRDGGGGGYGGGGGGY--GGGRGGYGGGGYGGGGGGY 123 Score = 45.4 bits (106), Expect = 5e-04 Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Frame = +2 Query: 167 FGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE--DNHVIDGKQVEIKRTIPK 340 F YGE++++ I+ +R TQ+ RGFGF+T+S + IE + +DG+ + + + Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSR 66 Query: 341 G 343 G Sbjct: 67 G 67
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 50.8 bits (120), Expect = 1e-05 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYAD 673 T + + N + +G + V A +K SL + SPY + Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGE 117 Score = 39.7 bits (91), Expect = 0.027 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 50.8 bits (120), Expect = 1e-05 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYAD 673 T + + N + +G + V A +K SL + SPY + Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGE 117 Score = 39.7 bits (91), Expect = 0.027 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 50.8 bits (120), Expect = 1e-05 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYAD 673 T + + N + +G + V A +K SL + SPY + Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGE 117 Score = 39.7 bits (91), Expect = 0.027 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 50.8 bits (120), Expect = 1e-05 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P D + +FVG +P +++ KD FS+ G VV ++ D T + +G+GF + ++ Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQE 68 Query: 530 TVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPR--RSPYAD 673 T + + N + +G + V A +K SL + SPY + Sbjct: 69 TALSAM-RNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGE 117 Score = 39.7 bits (91), Expect = 0.027 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 S +F+G + + + K+ F + G +V ++ +R T KP+G+GF Y D Sbjct: 14 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
>Q8N6W0:CELF5_HUMAN CUG-BP- and ETR-3-like factor 5 - Homo sapiens (Human)| Length = 485 Score = 50.8 bits (120), Expect = 1e-05 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D E F FG ++ ++ D +TN+S+ FGF+ FD + + A Sbjct: 402 LFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAM 461 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK P +P Sbjct: 462 NGFQIGMKRLKVQLKR--PKDPGHP 484 Score = 42.7 bits (99), Expect = 0.003 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 335 PKGAAP--LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGF 508 P G P +KD K+FVG +P L + + K F +FG++ E ++ D T +G F Sbjct: 31 PPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHKGCAF 90 Query: 509 IVFDA 523 + + A Sbjct: 91 LTYCA 95 Score = 41.6 bits (96), Expect = 0.007 Identities = 20/84 (23%), Positives = 44/84 (52%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + +Q++G +FI L ++ + F +G I+ + + +R T + + FGF+++ Sbjct: 390 QQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFD 449 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKR 328 +PA I+ ++G Q+ +KR Sbjct: 450 NPASAQAAIQ---AMNGFQIGMKR 470
>Q792H5:CELF2_RAT CUG-BP- and ETR-3-like factor 2 - Rattus norvegicus (Rat)| Length = 508 Score = 50.8 bits (120), Expect = 1e-05 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S KE F YG + ++++R P+ G Sbjct: 27 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCC 86 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 87 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 145 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 146 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 204 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 205 IVVKFADTQK 214 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 484 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 485 NGFQIGMKRLKVQLKRS--KNDSKP 507
>Q5R8Y8:CELF2_PONPY CUG-BP- and ETR-3-like factor 2 - Pongo pygmaeus (Orangutan)| Length = 508 Score = 50.8 bits (120), Expect = 1e-05 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S KE F YG + ++++R P+ G Sbjct: 27 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCC 86 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 87 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 145 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 146 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 204 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 205 IVVKFADTQK 214 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 484 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 485 NGFQIGMKRLKVQLKRS--KNDSKP 507
>Q9Z0H4:CELF2_MOUSE CUG-BP- and ETR-3-like factor 2 - Mus musculus (Mouse)| Length = 508 Score = 50.8 bits (120), Expect = 1e-05 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S KE F YG + ++++R P+ G Sbjct: 27 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCC 86 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 87 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 145 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 146 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 204 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 205 IVVKFADTQK 214 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 484 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 485 NGFQIGMKRLKVQLKRS--KNDSKP 507
>O95319:CELF2_HUMAN CUG-BP- and ETR-3-like factor 2 - Homo sapiens (Human)| Length = 508 Score = 50.8 bits (120), Expect = 1e-05 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S KE F YG + ++++R P+ G Sbjct: 27 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCC 86 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 87 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 145 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 146 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 204 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 205 IVVKFADTQK 214 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 425 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 484 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 485 NGFQIGMKRLKVQLKRS--KNDSKP 507
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 50.8 bits (120), Expect = 1e-05 Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 5/155 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S +E F +YG + + ++++R P+ G Sbjct: 3 GTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCC 62 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + V+ G I+ P + + +K+F+G + + Sbjct: 63 FVTFYTRKAALEAQNALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMISKKCTE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 ++ + FS FG++ E I+ SRG F+ F Sbjct: 122 NDIRVMFSSFGQIEECRIL-RGPDGLSRGCAFVTF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 460 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 461 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 485
>Q6PFR5:TRA2A_MOUSE Transformer-2 protein homolog - Mus musculus (Mouse)| Length = 281 Score = 50.4 bits (119), Expect = 2e-05 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Frame = +2 Query: 383 VGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGN 562 V GL + + ++ FS++G + ++ D T RSRGF F+ F+ E + ++ N Sbjct: 121 VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAM-ERAN 179 Query: 563 KIDLNGTQVEVKKAEPKKPSNP-PHSLDSKPRRSPYADGYDGFASSYNNGG---RLAPYK 730 ++L+G ++ V + K+ P P +P S G G GG R Y Sbjct: 180 GMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGGRRRDSYY 239 Query: 731 STGFGTRPGSYSS----AYVPGSYSSAYVPGSYSSAYVPGDY 844 G+ Y P Y S Y S S +Y P Y Sbjct: 240 DRGYDRGYDRYEDYDYRRRSPSPYYSRYRSRSRSRSYSPRRY 281 Score = 34.7 bits (78), Expect = 0.88 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 125 GLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE--DNHV 298 GLS T+ +E F +YG + ++ ++ T + RGF F+ + +E + Sbjct: 123 GLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGME 182 Query: 299 IDGKQVEIKRTIPKGA 346 +DG+++ + +I K A Sbjct: 183 LDGRRIRVDYSITKRA 198
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 50.4 bits (119), Expect = 2e-05 Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+F+G LS T+ + F +YG+I + I+K FGF+ + D I++ Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIVK--------NFGFVHMDSKSEADEAIQN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H +++G + ++ + KG K + K+ VG + ++ + E + F ++G VVE + Sbjct: 55 LHHYMLNGMAMNVE--MSKG----KPKTSTKLHVGNISSSCTNQELRAKFEEYGPVVECD 108 Query: 464 IICDHS 481 I+ D++ Sbjct: 109 IVKDYA 114 Score = 43.1 bits (100), Expect = 0.002 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 KIFVG L +E + FS++GK+ E +I+ + FGF+ D++ DE + Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQN 54 Query: 554 KGNKIDLNG--TQVEVKKAEPK 613 + + LNG VE+ K +PK Sbjct: 55 LHHYM-LNGMAMNVEMSKGKPK 75
>Q8C2Q3:RBM14_MOUSE RNA-binding protein 14 - Mus musculus (Mouse)| Length = 669 Score = 50.4 bits (119), Expect = 2e-05 Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 2/220 (0%) Frame = +2 Query: 110 KMFIGGLS-RQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 K+F+G + T+ F YG ++ +MK+ F F+ + A R IE Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGAVRAIE 53 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H G ++ R + + + T KIFVG + A E + F + G+V+E ++ Sbjct: 54 ALH---GHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDV 110 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D + F+ + E +A+ K ++ G ++ V+ + + P ++ S Sbjct: 111 VKD--------YAFVHMEKEADAKAAIAQLNGK-EVKGKRINVELSTKGQKKGPALAIQS 161 Query: 647 KPRRSPYADGYDGFASSYNNGGRLAPYK-STGFGTRPGSY 763 + G F + GG A + FG G + Sbjct: 162 GDKTKKPGAGDTAFPGT---GGFSATFDYQQAFGNSTGGF 198
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 50.4 bits (119), Expect = 2e-05 Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 8/175 (4%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY----SDPAIVDRV 280 +FI L E F +G I+ + + T + +G+GF+ + S A +D++ Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 281 ----IEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 + D V G + + P F ++V LP + +DE + F KFG Sbjct: 197 NGMLMNDKQVFVGHFIRRQERARDENTPTPRFTN--VYVKNLPKEIGEDELRKTFGKFGV 254 Query: 449 VVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPK 613 + ++ D S N SR FGF+ F+ + + +K N I L + V +A+ K Sbjct: 255 ISSAVVMRDQSGN-SRCFGFVNFECTEAAASAV-EKMNGISLGDDVLYVGRAQKK 307 Score = 50.1 bits (118), Expect = 2e-05 Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 32/257 (12%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS-DPAIVDRVIED 289 +++ L ++ ++ FGK+G I AV+M+++ + R FGF+ + A V + Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 290 NHVIDGKQVEIKRTIPKGAAPLKDFKTK---------------KIFVGGLPTALRDDEFK 424 N + G V K + ++ + K +++ L ++ D++ K Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVF-DAEKTVDELLAKKGNKIDLNGTQVEVKK 601 + FS++G V +++ + SRGFGF+ + + E+ + L G I + + + Sbjct: 350 EMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQ 408 Query: 602 AEPKK---------------PSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPYKST 736 + + P + H P P Y G NG + P + Sbjct: 409 RKEDRRAHLQALFSQIRAPGPMSGFHHPPGGPMPGPPQHMYVG-----QNGASMVPSQPI 463 Query: 737 GFGTRPGSYSSAYVPGS 787 G+G +P + PGS Sbjct: 464 GYGFQP-QFMPGMRPGS 479 Score = 35.8 bits (81), Expect = 0.39 Identities = 19/73 (26%), Positives = 34/73 (46%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDR 277 + A +++ L KE F +YG + + +M RGFGF+ YS+P R Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMS-RGFGFVAYSNPEEALR 387 Query: 278 VIEDNHVIDGKQV 316 + + ++GK + Sbjct: 388 ALSE---MNGKMI 397
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 50.4 bits (119), Expect = 2e-05 Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 3/170 (1%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 + + LS + T +E F K + + + K +G+ FI ++ + Sbjct: 491 LVLSNLSYSATEETLQEVFEK----ATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSC 546 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 + I+G+ + ++ P+G+ + +K +FV GL ++ K+ F V I Sbjct: 547 NKMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGS---VRARI 603 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVEVKKAEPK 613 + D T S+GFGF+ F++E+ D AK+ + +++G +V + A+PK Sbjct: 604 VTDRETGSSKGFGFVDFNSEE--DAKAAKEAMEDGEIDGNKVTLDWAKPK 651 Score = 40.8 bits (94), Expect = 0.012 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 7/160 (4%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +FIG L+ S+ K + D + R T R FG++ + +++ +E Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAVDVR-TGTNRKFGYVDFESAEDLEKALE-- 369 Query: 293 HVIDGKQV---EIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 + G +V EIK PKG K + + L + +DE K+ F VE Sbjct: 370 --LTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFE---DAVEIR 424 Query: 464 IICDHSTNRSRGFGFIVF----DAEKTVDELLAKKGNKID 571 ++ RS+G +I F DAEK ++E K+G +ID Sbjct: 425 LV--SQDGRSKGIAYIEFKSEADAEKNLEE---KQGAEID 459
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 50.4 bits (119), Expect = 2e-05 Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 19/250 (7%) Frame = +2 Query: 71 SGEMKQQDGASAA------KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPR 232 +GE QQ+ + + LS S T +E F K ++ M + + +P+ Sbjct: 443 TGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK----ATSIKMPQNNQGRPK 498 Query: 233 GFGFITYSDPAIVDRVIE--DNHVIDGKQVEIKRTIP---KGAAPLK---DFKTKKIFVG 388 G+ F+ + + +N I+G+ + ++ + P KG + + ++K +FV Sbjct: 499 GYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVR 558 Query: 389 GLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI 568 GL ++ ++ F + I+ D T S+GFGF+ F + + D AK+ + Sbjct: 559 GLSEDTTEETLRESFEGS---ISARIVTDRDTGSSKGFGFVDFSSPE--DAKAAKEAMED 613 Query: 569 -DLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRLAPY----KS 733 +++G +V + A+PK R + G+ G GG + Sbjct: 614 GEIDGNKVTLDFAKPK---------GEFQRGGGFGGGFGGRGGRGGRGGGRGGFGGRGGG 664 Query: 734 TGFGTRPGSY 763 GFG R G + Sbjct: 665 RGFGGRGGGF 674 Score = 42.7 bits (99), Expect = 0.003 Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 12/175 (6%) Frame = +2 Query: 83 KQQDGASAAKMFIGGLSR----QTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 K + ASA +F+ L+ + KE+FGK V V + FG++ Sbjct: 273 KTETPASAFSLFVKNLTPTKDYEELRTAIKEFFGKKNLQVSEV-----RIGSSKRFGYVD 327 Query: 251 YSDPAIVDRVIEDNHVIDGKQV---EIKRTIPKGAAPLKDFKTKK----IFVGGLPTALR 409 + +D+ ++ ++GK++ EIK K LK+ K ++ +FV LP + Sbjct: 328 FLSAEDMDKALQ----LNGKKLMGLEIKLEKAKSKESLKENKKERDARTLFVKNLPYRVT 383 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AKKGNKID 571 +DE K+ F +E ++ + S+G +I F E ++ L K+G ++D Sbjct: 384 EDEMKNVFE---NALEVRLVL-NKEGSSKGMAYIEFKTEAEAEKALEEKQGTEVD 434
>P25555:GBP2_YEAST Single-strand telomeric DNA-binding protein GBP2 - Saccharomyces| cerevisiae (Baker's yeast) Length = 427 Score = 50.4 bits (119), Expect = 2e-05 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 14/185 (7%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 +F+ L+ + KE FG GE+V+A I+ + RG G + ++ V I Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHH--RGMGTVEFTKNESVQDAISKF 181 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTK----------KIFVGGLPTALRDDEFKDFFS 436 D + +++ +++ P A K+F K ++F+ LP ++ KD F Sbjct: 182 DGALFMDRKLMVRQDNPPPEAA-KEFSKKATREEIDNGFEVFIINLPYSMNWQSLKDMFK 240 Query: 437 KFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL--AKKGNKIDLNGTQVEVKKAEP 610 + G V+ ++ D + SRGFG +++ E DE++ N +++ G +EV++ Sbjct: 241 ECGHVLRADVELDFN-GFSRGFGSVIYPTE---DEMIRAIDTFNGMEVEGRVLEVREGRF 296 Query: 611 KKPSN 625 K N Sbjct: 297 NKRKN 301 Score = 35.0 bits (79), Expect = 0.67 Identities = 26/104 (25%), Positives = 47/104 (45%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 IFV L ++ K+ F G+VVE +II S RG G + F ++V + ++K Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIIT--SKGHHRGMGTVEFTKNESVQDAISKF 181 Query: 557 GNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRSPYADGYDGF 688 + ++ ++ V++ P P K R +G++ F Sbjct: 182 DGALFMD-RKLMVRQDNP--PPEAAKEFSKKATREEIDNGFEVF 222
>Q4V7Y4:DAZLB_XENLA Deleted in azoospermia-like-B - Xenopus laevis (African clawed| frog) Length = 286 Score = 50.4 bits (119), Expect = 2e-05 Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVDEL 544 +FVGG+ + + E +DFF++FG V E +II D T S+G+GFI F D +K V Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEVDIQKIVKSQ 93 Query: 545 LAKKGNKIDL 574 ++ G K+ L Sbjct: 94 ISFHGKKLKL 103 Score = 41.6 bits (96), Expect = 0.007 Identities = 18/76 (23%), Positives = 43/76 (56%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIEDN 292 +F+GG+ +++F ++G + + I+ +R T +G+GFI++SD + ++++ Sbjct: 35 VFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEVDIQKIVKSQ 93 Query: 293 HVIDGKQVEIKRTIPK 340 GK++++ I K Sbjct: 94 ISFHGKKLKLGPAIRK 109
>Q5NVC8:CELF4_PONPY CUG-BP- and ETR-3-like factor 4 - Pongo pygmaeus (Orangutan)| Length = 486 Score = 50.4 bits (119), Expect = 2e-05 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 10/158 (6%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 MK D A K+FIG + R K F ++G+I + ++K+R T +G F+TY + Sbjct: 48 MKDHD---AIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCE 104 Query: 260 ---PAIVDRVIEDNHVIDG--KQVEIKRTIPK---GAAPLKD--FKTKKIFVGGLPTALR 409 + + + G + +++K + G++ L+ + +K+FVG L Sbjct: 105 RESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQS 164 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +D+ + F FG + E I+ N S+G F+ + + Sbjct: 165 EDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 201 Score = 44.3 bits (103), Expect = 0.001 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 P+KD K+F+G +P L + + K F +FGK+ E ++ D T +G F+ + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTY 102
>Q7TSY6:CELF4_MOUSE CUG-BP- and ETR-3-like factor 4 - Mus musculus (Mouse)| Length = 486 Score = 50.4 bits (119), Expect = 2e-05 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 10/158 (6%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 MK D A K+FIG + R K F ++G+I + ++K+R T +G F+TY + Sbjct: 48 MKDHD---AIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCE 104 Query: 260 ---PAIVDRVIEDNHVIDG--KQVEIKRTIPK---GAAPLKD--FKTKKIFVGGLPTALR 409 + + + G + +++K + G++ L+ + +K+FVG L Sbjct: 105 RESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQS 164 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +D+ + F FG + E I+ N S+G F+ + + Sbjct: 165 EDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 201 Score = 44.3 bits (103), Expect = 0.001 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 P+KD K+F+G +P L + + K F +FGK+ E ++ D T +G F+ + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTY 102
>Q9BZC1:CELF4_HUMAN CUG-BP- and ETR-3-like factor 4 - Homo sapiens (Human)| Length = 486 Score = 50.4 bits (119), Expect = 2e-05 Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 10/158 (6%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSD 259 MK D A K+FIG + R K F ++G+I + ++K+R T +G F+TY + Sbjct: 48 MKDHD---AIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCE 104 Query: 260 ---PAIVDRVIEDNHVIDG--KQVEIKRTIPK---GAAPLKD--FKTKKIFVGGLPTALR 409 + + + G + +++K + G++ L+ + +K+FVG L Sbjct: 105 RESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQS 164 Query: 410 DDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +D+ + F FG + E I+ N S+G F+ + + Sbjct: 165 EDDVRRLFEAFGNIEECTILRGPDGN-SKGCAFVKYSS 201 Score = 44.3 bits (103), Expect = 0.001 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 P+KD K+F+G +P L + + K F +FGK+ E ++ D T +G F+ + Sbjct: 47 PMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTY 102
>Q6P0B1:CELF2_DANRE CUG-BP- and ETR-3-like factor 2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 514 Score = 50.4 bits (119), Expect = 2e-05 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ E Q A KMF+G + R S KE F YG + I+++R P+ G Sbjct: 31 GALEHSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCC 90 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 91 FVTFYTRKAALEAQNALHNIKTLTGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 149 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS +G++ E I+ SRG F+ F + + G + Sbjct: 150 NDIRVMFSPYGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 208 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 209 MVVKFADTQK 218 Score = 43.1 bits (100), Expect = 0.002 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + A Sbjct: 431 LFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 490 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 491 NGFQIGMKRLKVQLKRS--KNDSKP 513
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 50.1 bits (118), Expect = 2e-05 Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Frame = +2 Query: 104 AAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIV---- 271 A +F L+ + +++F G++ D I+ +R++++ +G ++ + + V Sbjct: 165 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224 Query: 272 ----DRVIEDNHVIDGKQVEIKR------TIPKG-AAPLKDFKTKKIFVGGLPTALRDDE 418 R++ ++ Q E R + KG P++ ++VG L + +D Sbjct: 225 GLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDM 278 Query: 419 FKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 + F FGK+ ++ D T RS+G+GFI F + L ++ N +L G + V Sbjct: 279 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL-EQLNGFELAGRPMRV 336 Score = 43.1 bits (100), Expect = 0.002 Identities = 19/67 (28%), Positives = 36/67 (53%) Frame = +2 Query: 86 QQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPA 265 Q+ ++++G L + + F +G+I + V+MK+ T + +G+GFIT+SD Sbjct: 256 QKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 315 Query: 266 IVDRVIE 286 R +E Sbjct: 316 CARRALE 322
>Q5EA36:RBM14_BOVIN RNA-binding protein 14 - Bos taurus (Bovine)| Length = 669 Score = 50.1 bits (118), Expect = 2e-05 Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 2/220 (0%) Frame = +2 Query: 110 KMFIGGLS-RQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 K+F+G + T+ F YG ++ +MK+ F F+ + A R IE Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGAVRAIE 53 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H G ++ R + + + T KIFVG + A E + F + G+V+E ++ Sbjct: 54 ALH---GHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDV 110 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDS 646 + D + F+ + E +A+ K ++ G ++ V+ + + P ++ S Sbjct: 111 VKD--------YAFVHMEKEADAKAAIAQLNGK-EVKGKRINVELSTKGQKKGPGLAIQS 161 Query: 647 KPRRSPYADGYDGFASSYNNGGRLAPYK-STGFGTRPGSY 763 + G F + GG A + FG G + Sbjct: 162 GDKTKKPGAGDTAFPGT---GGFSATFDYQQAFGNSTGGF 198
>P38922:HRB1_YEAST Protein HRB1 - Saccharomyces cerevisiae (Baker's yeast)| Length = 454 Score = 50.1 bits (118), Expect = 2e-05 Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 14/214 (6%) Frame = +2 Query: 113 MFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE-- 286 +F+G L+ ++ E+F + G++V A I+ R RG G + +++ VDR I Sbjct: 163 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHH--RGMGTVEFTNSDDVDRAIRQY 220 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKD------------FKTKKIFVGGLPTALRDDEFKDF 430 D +++ +++ P + +K+ KT ++ V LP ++ KD Sbjct: 221 DGAFFMDRKIFVRQDNPPPSNNIKERKALDRGELRHNRKTHEVIVKNLPASVNWQALKDI 280 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVKKAEP 610 F + G V ++ D S G G + F K + + +K N + G ++VK E Sbjct: 281 FKECGNVAHADVELD-GDGVSTGSGTVSFYDIKDLHRAI-EKYNGYSIEGNVLDVKSKES 338 Query: 611 KKPSNPPHSLDSKPRRSPYADGYDGFASSYNNGG 712 + +D SP + F + GG Sbjct: 339 VHNHSDGDDVDIPMDDSPVNEEARKFTENVVGGG 372 Score = 37.4 bits (85), Expect = 0.14 Identities = 28/98 (28%), Positives = 46/98 (46%) Frame = +2 Query: 368 TKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL 547 + IFVG L ++ +FFS+ GKVV +II S RG G + F VD + Sbjct: 160 SNSIFVGNLTYDSTPEDLTEFFSQIGKVVRADIIT--SRGHHRGMGTVEFTNSDDVDRAI 217 Query: 548 AKKGNKIDLNGTQVEVKKAEPKKPSNPPHSLDSKPRRS 661 + ++ ++ V++ NPP S + K R++ Sbjct: 218 RQYDGAFFMD-RKIFVRQ------DNPPPSNNIKERKA 248
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 49.7 bits (117), Expect = 3e-05 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 6/251 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ + K A + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVEASKNKSKA------STKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ + Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRTGRVADF-TEQYNEQYGAVRTPYTMGYGESMY--- 210 Query: 812 SYSSAYVPGDY 844 Y+ AY DY Sbjct: 211 -YNDAYGALDY 220
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 49.7 bits (117), Expect = 3e-05 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 6/251 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ + K A + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVEASKNKSKA------STKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ + Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRTGRVADF-TEQYNEQYGAVRTPYTMGYGESMY--- 210 Query: 812 SYSSAYVPGDY 844 Y+ AY DY Sbjct: 211 -YNDAYGALDY 220
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 49.7 bits (117), Expect = 3e-05 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 6/251 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ + K A + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVEASKNKSKA------STKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ + Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRTGRVADF-TEQYNEQYGAVRTPYTMGYGESMY--- 210 Query: 812 SYSSAYVPGDY 844 Y+ AY DY Sbjct: 211 -YNDAYGALDY 220
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 49.7 bits (117), Expect = 3e-05 Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 6/251 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ + K A + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVEASKNKSKA------STKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ + Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRTGRVADF-TEQYNEQYGAVRTPYTMGYGESMY--- 210 Query: 812 SYSSAYVPGDY 844 Y+ AY DY Sbjct: 211 -YNDAYGALDY 220
>Q5RC41:RBM14_PONPY RNA-binding protein 14 - Pongo pygmaeus (Orangutan)| Length = 669 Score = 49.7 bits (117), Expect = 3e-05 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 7/205 (3%) Frame = +2 Query: 110 KMFIGGLS-RQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 K+F+G + T+ F YG ++ +MK+ F F+ + A R IE Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H G ++ R + + + T KIFVG + A E + F + G+V+E ++ Sbjct: 54 ALH---GHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDV 110 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVK---KAEPKKPSNPPHS 637 + D + F+ + E +A+ K ++ G ++ V+ K + K P S Sbjct: 111 VKD--------YAFVHMEKEADAKAAIAQLNGK-EVKGKRINVELSTKGQKKGPGLAVQS 161 Query: 638 LD--SKPRRSPYA-DGYDGFASSYN 703 D KP A G GF+++++ Sbjct: 162 GDKTKKPGAGDTAFPGTGGFSATFD 186
>Q96PK6:RBM14_HUMAN RNA-binding protein 14 - Homo sapiens (Human)| Length = 669 Score = 49.7 bits (117), Expect = 3e-05 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 7/205 (3%) Frame = +2 Query: 110 KMFIGGLS-RQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE 286 K+F+G + T+ F YG ++ +MK+ F F+ + A R IE Sbjct: 2 KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ--------FAFVHMRENAGALRAIE 53 Query: 287 DNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEI 466 H G ++ R + + + T KIFVG + A E + F + G+V+E ++ Sbjct: 54 ALH---GHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDV 110 Query: 467 ICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEVK---KAEPKKPSNPPHS 637 + D + F+ + E +A+ K ++ G ++ V+ K + K P S Sbjct: 111 VKD--------YAFVHMEKEADAKAAIAQLNGK-EVKGKRINVELSTKGQKKGPGLAVQS 161 Query: 638 LD--SKPRRSPYA-DGYDGFASSYN 703 D KP A G GF+++++ Sbjct: 162 GDKTKKPGAGDTAFPGTGGFSATFD 186
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 49.7 bits (117), Expect = 3e-05 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 5/154 (3%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY-- 253 MK D A K+F+G + R K F ++G I + ++K+R T +G F+TY Sbjct: 40 MKDHD---AIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCA 96 Query: 254 SDPAI-VDRVIEDNHVIDG--KQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFK 424 D A+ + + + G + +++K +G + +K+FVG L +++ + Sbjct: 97 RDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRG-----EDRKLFVGMLGKQQGEEDVR 151 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAE 526 F FG + E ++ S+G F+ F ++ Sbjct: 152 RLFQPFGHIEECTVL-RSPDGTSKGCAFVKFGSQ 184 Score = 47.4 bits (111), Expect = 1e-04 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = +2 Query: 335 PKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIV 514 P A P+KD K+FVG +P L + + K F +FG++ E ++ D T +G F+ Sbjct: 34 PGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLT 93 Query: 515 FDA 523 + A Sbjct: 94 YCA 96 Score = 45.8 bits (107), Expect = 4e-04 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D E F FG VV ++ D +TN+S+ FGF+ FD + + A Sbjct: 377 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 436 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 437 NGFQIGMKRLKVQLKR--PKDANRP 459
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 49.7 bits (117), Expect = 3e-05 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 5/154 (3%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY-- 253 MK D A K+F+G + R K F ++G I + ++K+R T +G F+TY Sbjct: 40 MKDHD---AIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCA 96 Query: 254 SDPAI-VDRVIEDNHVIDG--KQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFK 424 D A+ + + + G + +++K +G + +K+FVG L +++ + Sbjct: 97 RDSALKAQSALHEQKTLPGMNRPIQVKPAASEGRG-----EDRKLFVGMLGKQQGEEDVR 151 Query: 425 DFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAE 526 F FG + E ++ S+G F+ F ++ Sbjct: 152 RLFQPFGHIEECTVL-RSPDGTSKGCAFVKFGSQ 184 Score = 47.4 bits (111), Expect = 1e-04 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = +2 Query: 335 PKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIV 514 P A P+KD K+FVG +P L + + K F +FG++ E ++ D T +G F+ Sbjct: 34 PGPAVPMKDHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLT 93 Query: 515 FDA 523 + A Sbjct: 94 YCA 96 Score = 45.8 bits (107), Expect = 4e-04 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D E F FG VV ++ D +TN+S+ FGF+ FD + + A Sbjct: 398 LFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAM 457 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 458 NGFQIGMKRLKVQLKR--PKDANRP 480
>A4IIM2:CELF2_XENTR CUG-BP- and ETR-3-like factor 2 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 513 Score = 49.7 bits (117), Expect = 3e-05 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S K+ F YG + ++++R P+ G Sbjct: 22 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCC 81 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 82 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 140 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 141 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 199 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 200 IVVKFADTQK 209 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 430 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 489 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 490 NGFQIGMKRLKVQLKRS--KNDSKP 512
>Q7ZXE2:CELF2_XENLA CUG-BP- and ETR-3-like factor 2 - Xenopus laevis (African clawed| frog) Length = 536 Score = 49.7 bits (117), Expect = 3e-05 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S K+ F YG + ++++R P+ G Sbjct: 45 GALDHSDQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCC 104 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 105 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 163 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 164 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 222 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 223 IVVKFADTQK 232 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 453 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 512 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 513 NGFQIGMKRLKVQLKRS--KNDSKP 535
>Q24562:U2AF2_DROME Splicing factor U2AF 50 kDa subunit - Drosophila melanogaster| (Fruit fly) Length = 416 Score = 49.3 bits (116), Expect = 3e-05 Identities = 27/76 (35%), Positives = 40/76 (52%) Frame = +2 Query: 374 KIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAK 553 KIF+GGLP L DD+ K+ FGK+ ++ D +T S+G+ F + D+ +A Sbjct: 208 KIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIA- 266 Query: 554 KGNKIDLNGTQVEVKK 601 LNG Q+ KK Sbjct: 267 -----GLNGMQLGDKK 277 Score = 35.8 bits (81), Expect = 0.39 Identities = 24/83 (28%), Positives = 42/83 (50%) Frame = +2 Query: 101 SAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRV 280 S K+FIGGL + KE +G++ ++K+ T +G+ F Y D +I D+ Sbjct: 205 SPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQS 264 Query: 281 IEDNHVIDGKQVEIKRTIPKGAA 349 I ++G Q+ K+ I + A+ Sbjct: 265 IAG---LNGMQLGDKKLIVQRAS 284
>O57406:CEL1A_XENLA CUG-BP- and ETR-3-like factor 1-A - Xenopus laevis (African clawed| frog) Length = 489 Score = 49.3 bits (116), Expect = 3e-05 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG--FIT-YSDPAIVD-- 274 KMF+G + R S +E F +YG + + ++++R P+ G FIT Y+ A ++ Sbjct: 17 KMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCFITFYTRKAALEAQ 76 Query: 275 RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVV 454 + + V+ G I+ P + + +K+F+G + +++ + FS FG++ Sbjct: 77 NALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIE 135 Query: 455 EHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQVEVKKAEPKK 616 E I+ SRG F+ F + + G + + VK A+ +K Sbjct: 136 ECRIL-RGPDGMSRGCAFVTFTTRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQK 190 Score = 43.5 bits (101), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 463 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 464 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 488 Score = 31.2 bits (69), Expect = 9.7 Identities = 20/101 (19%), Positives = 45/101 (44%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + ++ + K+FIG +S+ + + F +G+I + I++ RG F+T++ Sbjct: 98 DSEKNNAVEDRKLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGPDGMS-RGCAFVTFT 156 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKI 379 ++ I+ H + + K A KD + K++ Sbjct: 157 TRSMAQMAIKSMHQAQTMEGCSSPIVVKFADTQKDKEQKRM 197
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 48.9 bits (115), Expect = 4e-05 Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 6/251 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ + K A + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVEASKNKSKA------STKLHVGNISPTCTNQELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRTGRVADF-TEQYNEQYGAVRPPYTMGYGESMY--- 210 Query: 812 SYSSAYVPGDY 844 Y+ AY DY Sbjct: 211 -YNDAYGALDY 220
>Q6DGV1:CELF4_DANRE CUG-BP- and ETR-3-like factor 4 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 520 Score = 48.9 bits (115), Expect = 4e-05 Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 3/149 (2%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY-- 253 MK D A K+FIG + R + F ++G+I + ++K+R T +G F+TY Sbjct: 41 MKDHD---AIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCA 97 Query: 254 -SDPAIVDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 + + + G I+ K A + +K+FVG L +D+ + Sbjct: 98 RESALKAQTALHEQKTLPGMNRPIQ---VKPADSESRGEDRKLFVGMLNKQQCEDDVRRL 154 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 F FG + E I+ N S+G F+ + Sbjct: 155 FESFGSIEECTILRGPDGN-SKGCAFVKY 182 Score = 46.6 bits (109), Expect = 2e-04 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + + Sbjct: 437 LFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSM 496 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 497 NGFQIGMKRLKVQLKR--PKDANRP 519 Score = 44.3 bits (103), Expect = 0.001 Identities = 18/61 (29%), Positives = 34/61 (55%) Frame = +2 Query: 350 PLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEK 529 P+KD K+F+G +P L + + + F +FGK+ E ++ D T +G F+ + A + Sbjct: 40 PMKDHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARE 99 Query: 530 T 532 + Sbjct: 100 S 100
>Q5R995:CELF1_PONPY CUG-BP- and ETR-3-like factor 1 - Pongo pygmaeus (Orangutan)| Length = 513 Score = 48.9 bits (115), Expect = 4e-05 Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 5/155 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R S +E F +YG + + ++++R P+ G Sbjct: 30 GTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCC 89 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + V+ G I+ P + + +K+F+G + + Sbjct: 90 FVTFYTRKAALEAQNALHNMKVLPGMHHPIQMK-PADSEKNNAVEDRKLFIGMISKKCTE 148 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 ++ + FS FG++ E I+ SRG + F Sbjct: 149 NDIRVMFSSFGQIEECRILWG-PDGLSRGCALVTF 182 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 430 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 487 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 488 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 512
>Q5F3T7:CELF1_CHICK CUG-BP- and ETR-3-like factor 1 - Gallus gallus (Chicken)| Length = 489 Score = 48.9 bits (115), Expect = 4e-05 Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 5/155 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A KMF+G + R +E F +YG + + ++++R P+ G Sbjct: 3 GTLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCC 62 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + ++ G I+ P + + +K+F+G + + Sbjct: 63 FVTFYTRKAALEAQNALHNMKILPGMHHPIQMK-PADSEKNNAVEDRKLFIGMISKKCNE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 ++ + FS FG++ E I+ SRG F+ F Sbjct: 122 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTF 155 Score = 43.1 bits (100), Expect = 0.002 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKK 556 +F+ LP D + F FG VV ++ D TN S+ FGF+ +D + + Sbjct: 406 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ-- 463 Query: 557 GNKIDLNGTQVEVK--KAEPKKPSNPPHSLDSKP 652 +NG Q+ +K K + K+ N DSKP Sbjct: 464 ----SMNGFQIGMKRLKVQLKRSKN-----DSKP 488
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 48.5 bits (114), Expect = 6e-05 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 6/190 (3%) Frame = +2 Query: 74 GEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITY 253 G + ++ +++G L + ++ + G+ V +++ R+T G+ F+ + Sbjct: 82 GSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEF 141 Query: 254 SDPAIVDRVIE-DNHVIDGKQVEIKRTIPKGAAPLKDFKTK----KIFVGGL-PTALRDD 415 + P + +N I G K G + +K IFVG L P D Sbjct: 142 ASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFD 201 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNGTQVEV 595 + F S++ +I+ D TN SRG+GF+ F E LA+ +I + V Sbjct: 202 VYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQI-CGDRPIRV 260 Query: 596 KKAEPKKPSN 625 A PK ++ Sbjct: 261 GLATPKSKAH 270 Score = 42.4 bits (98), Expect = 0.004 Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 33/182 (18%) Frame = +2 Query: 98 ASAAKMFIGGLSRQTS-MGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVD 274 AS +F+G LS + + + +Y A IM + T RG+GF+ ++D Sbjct: 183 ASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQK 242 Query: 275 RVIED--NHVIDGKQVEIKRTIPKGAAPL--------------------------KDFKT 370 + + + + + + PK A + D Sbjct: 243 SALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTAN 302 Query: 371 KKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVF----DAEKTVD 538 +FVGGL + ++E K F FG++V +I +G GF+ F AE ++ Sbjct: 303 STVFVGGLSKFVSEEELKYLFQNFGEIVYVKI------PPGKGCGFVQFVNRQSAEIAIN 356 Query: 539 EL 544 +L Sbjct: 357 QL 358
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 48.5 bits (114), Expect = 6e-05 Identities = 50/244 (20%), Positives = 103/244 (42%), Gaps = 6/244 (2%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIED 289 K+FIG L R+ + + F +YG++++ I+K +GF+ D + I + Sbjct: 3 KLFIGNLPREATEQEIRSLFEQYGKVLECDIIK--------NYGFVHIEDKTAAEDAIRN 54 Query: 290 NH--VIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHE 463 H + G + ++ A+ K + K+ VG + + E + F ++G V+E + Sbjct: 55 LHHYKLHGVNINVE------ASKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGPVIECD 108 Query: 464 IICDHSTNRSRGFGFIVFDAEKTVDELLAKKG-NKIDLNGTQVEVKKAEPKKPSNPPHSL 640 I+ D++ E+ D + A +G + + G ++ V+ + + + P Sbjct: 109 IVKDYA----------FVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGD 158 Query: 641 DSKPRRSPYADGYDGFASS---YNNGGRLAPYKSTGFGTRPGSYSSAYVPGSYSSAYVPG 811 S Y G +G S + GR+A + + + + G+ + Y G S Y Sbjct: 159 QS----GCYRCGKEGHWSKECPVDRSGRVADF-TEQYNEQYGAVRTPYTMGYGDSLYYNN 213 Query: 812 SYSS 823 +Y + Sbjct: 214 AYGA 217
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 48.5 bits (114), Expect = 6e-05 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 6/190 (3%) Frame = +2 Query: 71 SGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFIT 250 SG K +G S + + LS + + +E F K I ++ + +GF FI Sbjct: 404 SGNKKGPEGDSKV-LVVNNLSYSATEDSLREVFEKATSI-----RIPQNQGRAKGFAFIE 457 Query: 251 YSDPAIVDRVIE--DNHVIDGKQVEIKRTI---PKGAAPLKDFKTKKIFVGGLPTALRDD 415 +S ++ +N I+G+ + ++ + P+G ++K +FV GL ++ Sbjct: 458 FSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEE 517 Query: 416 EFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKI-DLNGTQVE 592 K+ F V I+ D T S+GFGF+ F + D AK+ + +++G +V Sbjct: 518 TLKEAFDGS---VNARIVTDRDTGASKGFGFVDFSTAE--DAKAAKEAMEDGEIDGNKVT 572 Query: 593 VKKAEPKKPS 622 + A+PK S Sbjct: 573 LDFAKPKGDS 582
>O43390:HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R - Homo sapiens (Human)| Length = 633 Score = 48.5 bits (114), Expect = 6e-05 Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 13/240 (5%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGE-IVDAVIMKERHTQKP-RGFGFITYSDPAIVD--- 274 ++F+G + + + E F K E +VD ++ + +K RGF F+ Y D Sbjct: 247 RLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQAR 306 Query: 275 -RVIEDNHVIDGKQVEIKRTIP-KGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGK 448 R++ + G V ++ P + P K K +FV L T + ++ + FS+FGK Sbjct: 307 RRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGK 366 Query: 449 VVEHEIICDHSTNRSRGFGFIVFD----AEKTVDELLAKKGNKIDLNGTQVEVKKAE-PK 613 + + + + F+ F+ A K +DE+ K ++ G ++E+ A+ P Sbjct: 367 L--------ERVKKLKDYAFVHFEDRGAAVKAMDEMNGK-----EIEGEEIEIVLAKPPD 413 Query: 614 KPSNPPHSLDSKPRRSPYADGYDGFASSYNNGGRL-APYKSTGFGTRPGSYSSAYVPGSY 790 K + R + Y D Y Y+ R+ P + G G G Y Y P Y Sbjct: 414 KKRKERQAARQASRSTAYEDYY------YHPPPRMPPPIRGRGRGGGRGGY--GYPPDYY 465 Score = 42.7 bits (99), Expect = 0.003 Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Frame = +2 Query: 110 KMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYSDPAIVDRVIE- 286 ++F+G + R F K G I D +M + + + RG+ FIT+ ++ Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225 Query: 287 -DNHVI-DGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEH 460 D++ I GK + + ++ ++FVG +P ++ ++ +F KV E Sbjct: 226 CDSYEIRPGKHLGVCISV----------ANNRLFVGSIP---KNKTKENILEEFSKVTEG 272 Query: 461 --EIICDHSTN---RSRGFGFIVFDAEKTVDELLAK-KGNKIDLNGTQVEVKKAEPKKPS 622 ++I H + ++RGF F+ ++ K+ + + K+ + G V V+ A+P + Sbjct: 273 LVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEP 332 Query: 623 NP 628 +P Sbjct: 333 DP 334
>Q8CIN6:CELF3_MOUSE CUG-BP- and ETR-3-like factor 3 - Mus musculus (Mouse)| Length = 465 Score = 48.5 bits (114), Expect = 6e-05 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 IF+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + A Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 442 NGFQIGMKRLKVQLKR--PKDANRP 464 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/84 (23%), Positives = 45/84 (53%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + +Q++G +FI L ++ + + F +G ++ A + +R T + + FGF+++ Sbjct: 370 QQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKR 328 +PA I+ ++G Q+ +KR Sbjct: 430 NPASAQAAIQ---AMNGFQIGMKR 450 Score = 39.3 bits (90), Expect = 0.036 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +2 Query: 353 LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +K+ K+FVG +P L + + K F +FG++ E +I D T +G F+ + A Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCA 57
>Q5SZQ8:CELF3_HUMAN CUG-BP- and ETR-3-like factor 3 - Homo sapiens (Human)| Length = 465 Score = 48.5 bits (114), Expect = 6e-05 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 IF+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + A Sbjct: 382 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 441 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 442 NGFQIGMKRLKVQLKR--PKDANRP 464 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/84 (23%), Positives = 45/84 (53%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + +Q++G +FI L ++ + + F +G ++ A + +R T + + FGF+++ Sbjct: 370 QQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 429 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKR 328 +PA I+ ++G Q+ +KR Sbjct: 430 NPASAQAAIQ---AMNGFQIGMKR 450 Score = 39.3 bits (90), Expect = 0.036 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +2 Query: 353 LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +K+ K+FVG +P L + + K F +FG++ E +I D T +G F+ + A Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCA 57
>Q08E07:CELF3_BOVIN CUG-BP- and ETR-3-like factor 3 - Bos taurus (Bovine)| Length = 461 Score = 48.5 bits (114), Expect = 6e-05 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 IF+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + A Sbjct: 378 IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAM 437 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 438 NGFQIGMKRLKVQLKR--PKDANRP 460 Score = 42.7 bits (99), Expect = 0.003 Identities = 20/84 (23%), Positives = 45/84 (53%) Frame = +2 Query: 77 EMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS 256 + +Q++G +FI L ++ + + F +G ++ A + +R T + + FGF+++ Sbjct: 366 QQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFD 425 Query: 257 DPAIVDRVIEDNHVIDGKQVEIKR 328 +PA I+ ++G Q+ +KR Sbjct: 426 NPASAQAAIQ---AMNGFQIGMKR 446 Score = 39.3 bits (90), Expect = 0.036 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +2 Query: 353 LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDA 523 +K+ K+FVG +P L + + K F +FG++ E +I D T +G F+ + A Sbjct: 1 MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCA 57
>Q7T2T1:CELF2_CHICK CUG-BP- and ETR-3-like factor 2 - Gallus gallus (Chicken)| Length = 484 Score = 48.5 bits (114), Expect = 6e-05 Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%) Frame = +2 Query: 68 GSGEMKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFG-- 241 G+ + Q A K F+G + R S KE F YG + ++++R P+ G Sbjct: 3 GALDHSDQPDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCC 62 Query: 242 FIT-YSDPAIVD--RVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRD 412 F+T Y+ A ++ + + + G I+ P + + +K+F+G + + Sbjct: 63 FVTFYTRKAALEAQNALHNIKTLPGMHHPIQMK-PADSEKSNAVEDRKLFIGMVSKKCNE 121 Query: 413 DEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELLAKKGNKIDLNG--TQ 586 ++ + FS FG++ E I+ SRG F+ F + + G + Sbjct: 122 NDIRVMFSPFGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSP 180 Query: 587 VEVKKAEPKK 616 + VK A+ +K Sbjct: 181 IVVKFADTQK 190 Score = 42.7 bits (99), Expect = 0.003 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 +F+ LP D + F FG V+ ++ D TN S+ FGF+ +D + + A Sbjct: 401 LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAM 460 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K++ K S P Sbjct: 461 NGFQIGMKRLKVQLKRS--KNDSKP 483
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 48.5 bits (114), Expect = 6e-05 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Frame = +2 Query: 377 IFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKTVDELL-AK 553 IF+ LP D E F FG V+ ++ D +TN+S+ FGF+ FD + + A Sbjct: 379 IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQAM 438 Query: 554 KGNKIDLNGTQVEVKKAEPKKPSNP 628 G +I + +V++K+ PK + P Sbjct: 439 NGFQIGMKRLKVQLKR--PKDANRP 461 Score = 47.8 bits (112), Expect = 1e-04 Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 3/149 (2%) Frame = +2 Query: 80 MKQQDGASAAKMFIGGLSRQTSMGTFKEYFGKYGEIVDAVIMKERHTQKPRGFGFITYS- 256 MK+ D A K+FIG + R K F ++G+I + ++K++ T +G F+TY Sbjct: 1 MKEPD---AIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCA 57 Query: 257 -DPAI-VDRVIEDNHVIDGKQVEIKRTIPKGAAPLKDFKTKKIFVGGLPTALRDDEFKDF 430 + A+ + + + G I+ K A + +K+FVG L D++ + Sbjct: 58 RESALKAQSALHEQKTLPGMNRPIQ---VKPADSESRGEDRKLFVGMLGKQQTDEDVRRM 114 Query: 431 FSKFGKVVEHEIICDHSTNRSRGFGFIVF 517 F FG + E ++ S+G F+ F Sbjct: 115 FEPFGNIDECTVL-RGPDGTSKGCAFVKF 142 Score = 40.4 bits (93), Expect = 0.016 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2 Query: 353 LKDFKTKKIFVGGLPTALRDDEFKDFFSKFGKVVEHEIICDHSTNRSRGFGFIVFDAEKT 532 +K+ K+F+G +P L + + K F +FGK+ E +I D T +G F+ + A ++ Sbjct: 1 MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARES 60 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 205,412,409 Number of extensions: 4482223 Number of successful extensions: 18112 Number of sequences better than 10.0: 550 Number of HSP's gapped: 17239 Number of HSP's successfully gapped: 1004 Length of query: 426 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 310 Effective length of database: 68,868,219 Effective search space: 21349147890 Effective search space used: 21349147890 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
