ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf75k14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001057249.1| Oryza sativa (japonica cultivar-group) Os03g0633800 (Os03g0633800) mRNA, complete cds Length = 1094 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 527 gtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctac 586 Query: 556 agggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 587 agggagctccgcgaggccctggaggccatgttcgtctgcttctccgg 633 Score = 159 bits (80), Expect = 3e-35 Identities = 125/140 (89%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgga 696 |||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 650 aacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcggc 709 Query: 697 gatgttcccttcgatatgttcagcggcacatgcaagaagttgaggatcatcaagagatcc 756 || || || ||||| ||||||| | ||||||||||||||||||||||||| |||||||| Sbjct: 710 gacgtccctttcgacatgttcaccagcacatgcaagaagttgaggatcatgaagagatct 769 Query: 757 gaagccacaggcctgggatc 776 ||||||||||| || ||||| Sbjct: 770 gaagccacagggctaggatc 789 Score = 101 bits (51), Expect = 5e-18 Identities = 69/74 (93%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 964 ttttagaagcacaaaggagatgtgtggagatttgggttaaactctccatgtgtttgtaca 1023 |||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 982 ttttagcagcacaaaggagatgtg--gagatttgggttcaactctccatgtgtatgtaca 1039 Query: 1024 aacgaaacagttat 1037 |||||||||||||| Sbjct: 1040 aacgaaacagttat 1053 Score = 87.7 bits (44), Expect = 8e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 334 gccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 |||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 329 gccaaggctcaagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccag 388 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 146 ccgacaacctcctcatggccaccgagctcaggctgggcct 185 |||||| |||| ||| |||||||||||||||||||||||| Sbjct: 156 ccgacagcctcatcaaggccaccgagctcaggctgggcct 195
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 123208 gtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctac 123149 Query: 556 agggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 123148 agggagctccgcgaggccctggaggccatgttcgtctgcttctccgg 123102 Score = 101 bits (51), Expect = 5e-18 Identities = 69/74 (93%), Gaps = 2/74 (2%) Strand = Plus / Minus Query: 964 ttttagaagcacaaaggagatgtgtggagatttgggttaaactctccatgtgtttgtaca 1023 |||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 122644 ttttagcagcacaaaggagatgtg--gagatttgggttcaactctccatgtgtatgtaca 122587 Query: 1024 aacgaaacagttat 1037 |||||||||||||| Sbjct: 122586 aacgaaacagttat 122573 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgg 695 |||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 123085 aacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcgg 123027 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 712 atgttcagcggcacatgcaagaagttgaggatcatcaagagatccgaagccacaggcctg 771 ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 122901 atgttcaccagcacatgcaagaagttgaggatcatgaagagatctgaagccacagggcta 122842 Query: 772 ggatc 776 ||||| Sbjct: 122841 ggatc 122837 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 343 caagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 ||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123397 caagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccag 123347 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 146 ccgacaacctcctcatggccaccgagctcaggctgggcct 185 |||||| |||| ||| |||||||||||||||||||||||| Sbjct: 123681 ccgacagcctcatcaaggccaccgagctcaggctgggcct 123642 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgac 534 |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 136239 gtgagcatggacggcgcgccgtacctgaggaagatcgac 136277 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 136791 tacgaggacaaggacggcgac 136811
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 24016911 gtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctac 24016970 Query: 556 agggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 24016971 agggagctccgcgaggccctggaggccatgttcgtctgcttctccgg 24017017 Score = 101 bits (51), Expect = 5e-18 Identities = 69/74 (93%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 964 ttttagaagcacaaaggagatgtgtggagatttgggttaaactctccatgtgtttgtaca 1023 |||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 24017475 ttttagcagcacaaaggagatgtg--gagatttgggttcaactctccatgtgtatgtaca 24017532 Query: 1024 aacgaaacagttat 1037 |||||||||||||| Sbjct: 24017533 aacgaaacagttat 24017546 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgg 695 |||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 24017034 aacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcgg 24017092 Score = 81.8 bits (41), Expect = 5e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 712 atgttcagcggcacatgcaagaagttgaggatcatcaagagatccgaagccacaggcctg 771 ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct: 24017218 atgttcaccagcacatgcaagaagttgaggatcatgaagagatctgaagccacagggcta 24017277 Query: 772 ggatc 776 ||||| Sbjct: 24017278 ggatc 24017282 Score = 77.8 bits (39), Expect = 7e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 343 caagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 ||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 24016722 caagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccag 24016772 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| |||||| | ||| ||||| | |||||||| |||||| Sbjct: 33033417 gtgagcatggacggggcgccatacctccgcaaggtcgacctccggatgtacggcggctac 33033358 Query: 556 agggagctcaggga 569 |||||||||||||| Sbjct: 33033357 agggagctcaggga 33033344 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 146 ccgacaacctcctcatggccaccgagctcaggctgggcct 185 |||||| |||| ||| |||||||||||||||||||||||| Sbjct: 24016438 ccgacagcctcatcaaggccaccgagctcaggctgggcct 24016477 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgac 534 |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 24003786 gtgagcatggacggcgcgccgtacctgaggaagatcgac 24003748 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Minus Query: 659 cctacgaggacaaggacggcgacctcatgct 689 |||| |||||||||||||||||||||||||| Sbjct: 33033275 cctatgaggacaaggacggcgacctcatgct 33033245 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 24003234 tacgaggacaaggacggcgac 24003214 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 352 gggtggccgccggtgaggtcgtaccggaagagc 384 ||||||||||||||| |||||||| ||| |||| Sbjct: 33033555 gggtggccgccggtggggtcgtacaggaggagc 33033523
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 165 bits (83), Expect = 4e-37 Identities = 101/107 (94%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||| Sbjct: 528 gtgagcatggacggggcgccgtacctgaggaagatcgacctgaggatgtacaagggctac 587 Query: 556 agggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 588 agggagctccgcgaggccctggaggccatgttcgtctgcttctccgg 634 Score = 159 bits (80), Expect = 3e-35 Identities = 125/140 (89%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgga 696 |||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 651 aacccgtcggagttcgccatcacctaccaggacaaggacggcgacctcatgctcgtcggc 710 Query: 697 gatgttcccttcgatatgttcagcggcacatgcaagaagttgaggatcatcaagagatcc 756 || || || ||||| ||||||| | ||||||||||||||||||||||||| |||||||| Sbjct: 711 gacgtccctttcgacatgttcaccagcacatgcaagaagttgaggatcatgaagagatct 770 Query: 757 gaagccacaggcctgggatc 776 ||||||||||| || ||||| Sbjct: 771 gaagccacagggctaggatc 790 Score = 101 bits (51), Expect = 5e-18 Identities = 69/74 (93%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 964 ttttagaagcacaaaggagatgtgtggagatttgggttaaactctccatgtgtttgtaca 1023 |||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||| Sbjct: 983 ttttagcagcacaaaggagatgtg--gagatttgggttcaactctccatgtgtatgtaca 1040 Query: 1024 aacgaaacagttat 1037 |||||||||||||| Sbjct: 1041 aacgaaacagttat 1054 Score = 87.7 bits (44), Expect = 8e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 334 gccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 |||||||| ||||| || |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 330 gccaaggctcaagtggtcgggtggccgccggtgaggtcgtacaggaagagctgcttccag 389 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 146 ccgacaacctcctcatggccaccgagctcaggctgggcct 185 |||||| |||| ||| |||||||||||||||||||||||| Sbjct: 157 ccgacagcctcatcaaggccaccgagctcaggctgggcct 196
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 143 bits (72), Expect = 1e-30 Identities = 102/112 (91%) Strand = Plus / Plus Query: 481 ggctccttcgtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgagg 540 ||||||||||||||||||||||||||||| || || ||||| |||||| | ||| ||||| Sbjct: 524 ggctccttcgtcaaagtgagcatggacggcgccccgtacctgaggaaggtggacctgagg 583 Query: 541 atgtacaagggctacagggagctcagggaggccctggaggccatgttcgtct 592 ||||||| |||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 584 atgtacaggggctacagggagctccgggaggccctggaggccttgttcgtct 635 Score = 137 bits (69), Expect = 9e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgga 696 |||| ||| |||| |||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 aacctgtcggagttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcgga 712 Query: 697 gatgttcccttcgatatgttcagcggcacatgcaagaagttgaggatcatcaagagatcc 756 || || || ||||| |||||| |||| ||||||||| |||||||||| |||||||| Sbjct: 713 gacgtgccgttcgagatgttcgctagcacctgcaagaagctgaggatcatgaagagatct 772 Query: 757 gaagccacaggcctggg 773 ||||||||||||||||| Sbjct: 773 gaagccacaggcctggg 789 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 355 tggccgccggtgaggtcgtaccggaagagctgcttccag 393 ||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tggccgccggtgaggtcgtaccggaagagctgcttccag 400
>ref|NM_001073742.1| Oryza sativa (japonica cultivar-group) Os12g0601400 (Os12g0601400) mRNA, complete cds Length = 1163 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 487 ttcgtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtac 546 ||||| || ||||||||||||||||| || ||||| |||||||| ||| | | | ||||| Sbjct: 425 ttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtac 484 Query: 547 aagggctacagggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| ||||||| | ||||| ||||||||||||||| ||||||||||||| Sbjct: 485 aagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccgg 540 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgga 696 ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 566 aacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcggc 625 Query: 697 gatgttcccttcgatatgttcagcggcacatgcaagaagttgaggatcat 746 || || || ||||| ||||||| | || ||||||| |||||||||||| Sbjct: 626 gacgtcccattcgagatgttcattagtacgtgcaagaggttgaggatcat 675 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 334 gccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 |||||||| || || || || ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 272 gccaaggcgcaggtggtgggatggccgccggtgaggtcgtacaggaagagctgcctccag 331
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 487 ttcgtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtac 546 ||||| || ||||||||||||||||| || ||||| |||||||| ||| | | | ||||| Sbjct: 25359678 ttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtac 25359737 Query: 547 aagggctacagggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| ||||||| | ||||| ||||||||||||||| ||||||||||||| Sbjct: 25359738 aagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccgg 25359793 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgg 695 ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 25359819 aacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcgg 25359877 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 355 tggccgccggtgaggtcgtaccggaagagctgcttccag 393 ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 25359546 tggccgccggtgaggtcgtacaggaagagctgcctccag 25359584 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Minus Query: 658 acctacgaggacaaggacggcgac 681 |||||||||||||||||||||||| Sbjct: 25345403 acctacgaggacaaggacggcgac 25345380 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 485 ccttcgtcaaagtgagcatggacggagcgccctacct 521 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 25346757 ccttcgtgaaggtgagcatggacggcgcgccatacct 25346721
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 487 ttcgtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtac 546 ||||| || ||||||||||||||||| || ||||| |||||||| ||| | | | ||||| Sbjct: 426 ttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtac 485 Query: 547 aagggctacagggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| ||||||| | ||||| ||||||||||||||| ||||||||||||| Sbjct: 486 aagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccgg 541 Score = 99.6 bits (50), Expect = 2e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgga 696 ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 567 aacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcggc 626 Query: 697 gatgttcccttcgatatgttcagcggcacatgcaagaagttgaggatcat 746 || || || ||||| ||||||| | || ||||||| |||||||||||| Sbjct: 627 gacgtcccattcgagatgttcattagtacgtgcaagaggttgaggatcat 676 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 334 gccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccag 393 |||||||| || || || || ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 273 gccaaggcgcaggtggtgggatggccgccggtgaggtcgtacaggaagagctgcctccag 332
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 487 ttcgtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtac 546 ||||| || ||||||||||||||||| || ||||| |||||||| ||| | | | ||||| Sbjct: 26488 ttcgtgaaggtgagcatggacggagctccatacctgaggaagatagacctcaaggtgtac 26547 Query: 547 aagggctacagggagctcagggaggccctggaggccatgttcgtctgcttctccgg 602 ||||||||| ||||||| | ||||| ||||||||||||||| ||||||||||||| Sbjct: 26548 aagggctaccgggagcttcgcgaggcactggaggccatgttcctctgcttctccgg 26603 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 637 aacccgtccgagtacgccatcacctacgaggacaaggacggcgacctcatgcttgtcgg 695 ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 26629 aacccgtccgacttcgccgtcacctacgaggacaaggacggcgacctcatgctcgtcgg 26687 Score = 61.9 bits (31), Expect = 4e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 355 tggccgccggtgaggtcgtaccggaagagctgcttccag 393 ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 26356 tggccgccggtgaggtcgtacaggaagagctgcctccag 26394 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Minus Query: 658 acctacgaggacaaggacggcgac 681 |||||||||||||||||||||||| Sbjct: 12213 acctacgaggacaaggacggcgac 12190 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 485 ccttcgtcaaagtgagcatggacggagcgccctacct 521 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 13567 ccttcgtgaaggtgagcatggacggcgcgccatacct 13531
>gb|DQ245469.1| Zea mays clone 15843 mRNA sequence Length = 932 Score = 93.7 bits (47), Expect = 1e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| |||||||||||| | ||| | ||||||||||||| ||| Sbjct: 349 gtgagcatggacggcgcgccgtacctcaggaaggtggacctccggatgtacaaggggtac 408 Query: 556 agggagctcagggaggccctgga 578 ||||||||||||||||| ||||| Sbjct: 409 agggagctcagggaggctctgga 431 Score = 73.8 bits (37), Expect = 1e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 650 acgccatcacctacgaggacaaggacggcgacctcatgcttgtcggagatgttcccttcg 709 |||||||| ||||||| ||||||||||||||||||||||| | |||||| || |||| | Sbjct: 491 acgccatcgcctacgaagacaaggacggcgacctcatgctcgccggagacgtgccctggg 550 Query: 710 atatgttca 718 ||||||||| Sbjct: 551 atatgttca 559 Score = 71.9 bits (36), Expect = 5e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 335 ccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaagagctgcttccagg 394 ||||||| ||||| || |||||||||||||||||| ||||| |||||| | |||||||| Sbjct: 221 ccaaggcgcaagtggtcgggtggccgccggtgagggcgtacaggaagaacaccttccagg 280 Query: 395 cggcggcg 402 |||||||| Sbjct: 281 cggcggcg 288
>ref|NM_001065586.1| Oryza sativa (japonica cultivar-group) Os07g0182400 (Os07g0182400) mRNA, complete cds Length = 1163 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgcttgtcggagatgttcccttcgatatgttca 718 ||||||||||||||||||| |||||||||||||| |||||||| |||| || ||||||| Sbjct: 637 cctacgaggacaaggacggtgacctcatgcttgttggagatgtgccctgggaaatgttca 696 Query: 719 gcggcacatgcaagaagttgaggatcatcaagagatccgaagcca 763 | | |||||||||||||||||||| ||| | || ||||||| Sbjct: 697 tctcttcctgcaagaagttgaggatcatgaagggctctgaagcca 741 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 540 gatgtacaagggctacagggagctcagggaggccctgga 578 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 530 gatgtgcaagggctacagggagctgagggaggcactgga 568
>dbj|AK103483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130J12, full insert sequence Length = 1164 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgcttgtcggagatgttcccttcgatatgttca 718 ||||||||||||||||||| |||||||||||||| |||||||| |||| || ||||||| Sbjct: 638 cctacgaggacaaggacggtgacctcatgcttgttggagatgtgccctgggaaatgttca 697 Query: 719 gcggcacatgcaagaagttgaggatcatcaagagatccgaagcca 763 | | |||||||||||||||||||| ||| | || ||||||| Sbjct: 698 tctcttcctgcaagaagttgaggatcatgaagggctctgaagcca 742 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 540 gatgtacaagggctacagggagctcagggaggccctgga 578 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 531 gatgtgcaagggctacagggagctgagggaggcactgga 569
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 659 cctacgaggacaaggacggcgacctcatgcttgtcggagatgttccct 706 ||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 4388001 cctacgaggacaaggacggtgacctcatgcttgttggagatgtgccct 4387954 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 540 gatgtacaagggctacagggagctcagggaggccctgga 578 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 4388108 gatgtgcaagggctacagggagctgagggaggcactgga 4388070 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 727 tgcaagaagttgaggatcatcaagagatccgaagcca 763 |||||||||||||||||||| ||| | || ||||||| Sbjct: 4387821 tgcaagaagttgaggatcatgaagggctctgaagcca 4387785
>dbj|AP003835.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1506_G02 Length = 106742 Score = 71.9 bits (36), Expect = 5e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 659 cctacgaggacaaggacggcgacctcatgcttgtcggagatgttccct 706 ||||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 27850 cctacgaggacaaggacggtgacctcatgcttgttggagatgtgccct 27803 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Minus Query: 540 gatgtacaagggctacagggagctcagggaggccctgga 578 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 27957 gatgtgcaagggctacagggagctgagggaggcactgga 27919 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 727 tgcaagaagttgaggatcatcaagagatccgaagcca 763 |||||||||||||||||||| ||| | || ||||||| Sbjct: 27670 tgcaagaagttgaggatcatgaagggctctgaagcca 27634
>gb|AY106605.1| Zea mays PCO137466 mRNA sequence Length = 493 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 722 gcacatgcaagaagttgaggatcatcaagagatccgaagccacaggcctgggatc 776 |||| |||| |||| |||||||||| |||||||| |||||||||||||||||||| Sbjct: 36 gcacctgcaggaagctgaggatcatgaagagatctgaagccacaggcctgggatc 90
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 61.9 bits (31), Expect = 4e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgct 689 ||||||||||||||||||||||||||||||| Sbjct: 584 cctacgaggacaaggacggcgacctcatgct 614 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaag 528 |||||||||||||| ||||| |||||| ||||| Sbjct: 445 gtgagcatggacggggcgccatacctccggaag 477
>ref|NM_001058100.1| Oryza sativa (japonica cultivar-group) Os03g0797800 (Os03g0797800) mRNA, complete cds Length = 1129 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| |||||| | ||| ||||| | |||||||| |||||| Sbjct: 402 gtgagcatggacggggcgccatacctccgcaaggtcgacctccggatgtacggcggctac 461 Query: 556 agggagctcaggga 569 |||||||||||||| Sbjct: 462 agggagctcaggga 475 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgct 689 |||| |||||||||||||||||||||||||| Sbjct: 544 cctatgaggacaaggacggcgacctcatgct 574 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaagagc 384 ||||||||||||||| |||||||| ||| |||| Sbjct: 264 gggtggccgccggtggggtcgtacaggaggagc 296
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| |||||| | ||| ||||| | |||||||| |||||| Sbjct: 47268 gtgagcatggacggggcgccatacctccgcaaggtcgacctccggatgtacggcggctac 47327 Query: 556 agggagctcaggga 569 |||||||||||||| Sbjct: 47328 agggagctcaggga 47341 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgct 689 |||| |||||||||||||||||||||||||| Sbjct: 47410 cctatgaggacaaggacggcgacctcatgct 47440 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaagagc 384 ||||||||||||||| |||||||| ||| |||| Sbjct: 47130 gggtggccgccggtggggtcgtacaggaggagc 47162
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagggctac 555 |||||||||||||| ||||| |||||| | ||| ||||| | |||||||| |||||| Sbjct: 402 gtgagcatggacggggcgccatacctccgcaaggtcgacctccggatgtacggcggctac 461 Query: 556 agggagctcaggga 569 |||||||||||||| Sbjct: 462 agggagctcaggga 475 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 659 cctacgaggacaaggacggcgacctcatgct 689 |||| |||||||||||||||||||||||||| Sbjct: 544 cctatgaggacaaggacggcgacctcatgct 574 Score = 42.1 bits (21), Expect = 4.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaagagc 384 ||||||||||||||| |||||||| ||| |||| Sbjct: 264 gggtggccgccggtggggtcgtacaggaggagc 296
>emb|CT833720.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA130H10, full insert sequence Length = 1269 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 548 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 592
>ref|NM_001050382.1| Oryza sativa (japonica cultivar-group) Os01g0675700 (Os01g0675700) mRNA, complete cds Length = 1231 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 547 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 591
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 27771324 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 27771368 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 4074987 gggtggccgccggtgaggtcgttcaggaaga 4074957 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 4074673 tacgaggacaaggacggcgac 4074653
>emb|AJ627256.1| Oryza sativa (indica cultivar-group) partial mRNA for putative IAA8 auxin regulated transcriptional repressor (IAA8 gene) Length = 803 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 450 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 494
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 63379 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 63423
>dbj|AP006634.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT15O18, TM0086, complete sequence Length = 133572 Score = 58.0 bits (29), Expect = 7e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggat 542 ||||||||||||||||| ||||| || |||||||| ||||| ||| ||||||| Sbjct: 26883 gtcaaagtgagcatggatggagctccttacctcagaaagatagacttgaggat 26935
>dbj|AK106121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E11, full insert sequence Length = 1231 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 547 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 591
>dbj|AK102396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092H03, full insert sequence Length = 971 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 462 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 506
>dbj|AK061495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C06, full insert sequence Length = 1140 Score = 58.0 bits (29), Expect = 7e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 ||||| ||||||||||| ||||| ||||||||||||||| ||||| Sbjct: 473 gtcaaggtgagcatggatggagccccctacctcaggaaggtcgac 517
>gb|AY556421.1| Elaeis guineensis IAA type protein (IAA1) mRNA, complete cds Length = 970 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| |||||||| Sbjct: 342 gggtggccgccggtgaggtcgttccggaaga 372 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 573 tacgaggacaaggacggcgac 593
>ref|NM_001057248.1| Oryza sativa (japonica cultivar-group) Os03g0633500 (Os03g0633500) mRNA, complete cds Length = 660 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgac 534 |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 379 gtgagcatggacggcgcgccgtacctgaggaagatcgac 417 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 559 tacgaggacaaggacggcgac 579
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgac 534 |||||||||||||| ||||| ||||| |||||||||||| Sbjct: 5139 gtgagcatggacggcgcgccgtacctgaggaagatcgac 5177 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 5691 tacgaggacaaggacggcgac 5711
>gb|BT017977.1| Zea mays clone EL01N0525A01.c mRNA sequence Length = 885 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtac 546 ||||||||||| || |||||||||||||||||| | ||||| | ||||||| Sbjct: 296 gtgagcatggatggcgcgccctacctcaggaaggtggacatcaagatgtac 346
>ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); transcription factor (AXR3) mRNA, complete cds Length = 1057 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 358 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 407
>gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 690 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 234 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 283
>gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 721 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 234 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 283
>gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 1033 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 316 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 365
>gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete sequence Length = 1021 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 358 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 407
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 489 cgtcaaagtgagcatggacggagcgccctacctcaggaagatcgac 534 |||||| || |||||||| || ||||| |||||||||||||||||| Sbjct: 426 cgtcaaggtcagcatggatggcgcgccgtacctcaggaagatcgac 471
>gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (IAA17) mRNA, complete cds Length = 971 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 333 ggccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||| || || ||||| |||||||| || |||||||||| Sbjct: 295 ggccaaggcacaagttgtgggatggccaccggtgagatcataccggaaga 344
>emb|CT832699.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA012O12, full insert sequence Length = 1162 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 572 cacctacgaggacaaggacggcgac 596
>ref|NM_001064521.1| Oryza sativa (japonica cultivar-group) Os06g0597000 (Os06g0597000) mRNA, complete cds Length = 1227 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 563 cacctacgaggacaaggacggcgac 587
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 23118968 cacctacgaggacaaggacggcgac 23118992 Score = 46.1 bits (23), Expect = 0.26 Identities = 62/75 (82%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaag 549 ||||| ||||||||||| || || || |||||||||||| | ||| | | |||||||||| Sbjct: 13189531 gtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaag 13189590 Query: 550 ggctacagggagctc 564 ||||| ||||||| Sbjct: 13189591 aactacaaggagctc 13189605
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 69616 cacctacgaggacaaggacggcgac 69640
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 564 cacctacgaggacaaggacggcgac 588
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 50.1 bits (25), Expect = 0.017 Identities = 25/25 (100%) Strand = Plus / Plus Query: 657 cacctacgaggacaaggacggcgac 681 ||||||||||||||||||||||||| Sbjct: 563 cacctacgaggacaaggacggcgac 587
>gb|DQ245018.1| Zea mays clone 12237 mRNA sequence Length = 969 Score = 48.1 bits (24), Expect = 0.066 Identities = 27/28 (96%) Strand = Plus / Plus Query: 355 tggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||||||||||| |||| Sbjct: 363 tggccgccggtgaggtcgtaccgcaaga 390
>emb|CT829456.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN102L04, full insert sequence Length = 1312 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 658 acctacgaggacaaggacggcgac 681 |||||||||||||||||||||||| Sbjct: 696 acctacgaggacaaggacggcgac 719 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 485 ccttcgtcaaagtgagcatggacggagcgccctacct 521 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 496 ccttcgtgaaggtgagcatggacggcgcgccatacct 532
>ref|NM_001073741.1| Oryza sativa (japonica cultivar-group) Os12g0601300 (Os12g0601300) mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.066 Identities = 42/48 (87%) Strand = Plus / Plus Query: 335 ccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 |||||||||| || || |||||||||||||| |||| |||||||||| Sbjct: 600 ccaaggcacaggtggttgggtggccgccggtccggtcataccggaaga 647 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 658 acctacgaggacaaggacggcgac 681 |||||||||||||||||||||||| Sbjct: 932 acctacgaggacaaggacggcgac 955 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 485 ccttcgtcaaagtgagcatggacggagcgccctacct 521 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 732 ccttcgtgaaggtgagcatggacggcgcgccatacct 768
>gb|AY622365.1| Triticum aestivum clone WH-150 EST-SRR marker sequence Length = 174 Score = 48.1 bits (24), Expect = 0.066 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacct 521 ||||| |||||||||||||| ||||||||||| Sbjct: 87 gtcaaggtgagcatggacggcgcgccctacct 118
>gb|AY622364.1| Thinopyrum ponticum clone TW-150 EST-SRR marker sequence Length = 174 Score = 48.1 bits (24), Expect = 0.066 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacct 521 ||||| |||||||||||||| ||||||||||| Sbjct: 87 gtcaaggtgagcatggacggcgcgccctacct 118
>gb|AY622361.1| Bromus inermis clone SB-150 EST-SRR marker sequence Length = 171 Score = 48.1 bits (24), Expect = 0.066 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacct 521 ||||| |||||||||||||| ||||||||||| Sbjct: 84 gtcaaggtgagcatggacggcgcgccctacct 115
>gb|AY622360.1| Psathyrostachys juncea clone RW-150 EST-SRR marker sequence Length = 174 Score = 48.1 bits (24), Expect = 0.066 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacct 521 ||||| |||||||||||||| ||||||||||| Sbjct: 87 gtcaaggtgagcatggacggcgcgccctacct 118
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 48.1 bits (24), Expect = 0.066 Identities = 42/48 (87%) Strand = Plus / Plus Query: 335 ccaaggcacaagtcgtagggtggccgccggtgaggtcgtaccggaaga 382 |||||||||| || || |||||||||||||| |||| |||||||||| Sbjct: 602 ccaaggcacaggtggttgggtggccgccggtccggtcataccggaaga 649 Score = 48.1 bits (24), Expect = 0.066 Identities = 24/24 (100%) Strand = Plus / Plus Query: 658 acctacgaggacaaggacggcgac 681 |||||||||||||||||||||||| Sbjct: 934 acctacgaggacaaggacggcgac 957 Score = 42.1 bits (21), Expect = 4.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 485 ccttcgtcaaagtgagcatggacggagcgccctacct 521 ||||||| || |||||||||||||| ||||| ||||| Sbjct: 734 ccttcgtgaaggtgagcatggacggcgcgccatacct 770
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 48.1 bits (24), Expect = 0.066 Identities = 30/32 (93%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacct 521 ||||| |||||||||||||| ||||||||||| Sbjct: 458 gtcaaggtgagcatggacggcgcgccctacct 489
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 48.1 bits (24), Expect = 0.066 Identities = 27/28 (96%) Strand = Plus / Plus Query: 355 tggccgccggtgaggtcgtaccggaaga 382 ||||||||||||||||||||||| |||| Sbjct: 339 tggccgccggtgaggtcgtaccgcaaga 366
>emb|CT831133.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA058I12, full insert sequence Length = 959 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 354 gggtggccgccggtgaggtcgttcaggaaga 384 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 588 tacgaggacaaggacggcgac 608
>emb|CT831131.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115I04, full insert sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 510 gggtggccgccggtgaggtcgttcaggaaga 540 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 744 tacgaggacaaggacggcgac 764
>ref|NM_001064089.1| Oryza sativa (japonica cultivar-group) Os06g0335500 (Os06g0335500) mRNA, complete cds Length = 1273 Score = 46.1 bits (23), Expect = 0.26 Identities = 62/75 (82%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaag 549 ||||| ||||||||||| || || || |||||||||||| | ||| | | |||||||||| Sbjct: 605 gtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaag 664 Query: 550 ggctacagggagctc 564 ||||| ||||||| Sbjct: 665 aactacaaggagctc 679
>ref|NM_001048727.1| Oryza sativa (japonica cultivar-group) Os01g0178500 (Os01g0178500) mRNA, complete cds Length = 1118 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 356 gggtggccgccggtgaggtcgttcaggaaga 386 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 590 tacgaggacaaggacggcgac 610
>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA, complete cds Length = 1126 Score = 46.1 bits (23), Expect = 0.26 Identities = 47/55 (85%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaagg 550 |||||||||||||| ||||| ||||| ||||| | ||| ||| ||||||||||| Sbjct: 403 gtgagcatggacggggcgccgtacctgcggaaggttgacttgaagatgtacaagg 457
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 41730 gggtggccgccggtgaggtcgttcaggaaga 41700 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 41416 tacgaggacaaggacggcgac 41396
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Minus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 21958 gggtggccgccggtgaggtcgttcaggaaga 21928 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 21644 tacgaggacaaggacggcgac 21624
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 46.1 bits (23), Expect = 0.26 Identities = 62/75 (82%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaag 549 ||||| ||||||||||| || || || |||||||||||| | ||| | | |||||||||| Sbjct: 106719 gtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaag 106778 Query: 550 ggctacagggagctc 564 ||||| ||||||| Sbjct: 106779 aactacaaggagctc 106793
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 356 gggtggccgccggtgaggtcgttcaggaaga 386 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 590 tacgaggacaaggacggcgac 610
>dbj|AK121989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C03, full insert sequence Length = 1277 Score = 46.1 bits (23), Expect = 0.26 Identities = 62/75 (82%) Strand = Plus / Plus Query: 490 gtcaaagtgagcatggacggagcgccctacctcaggaagatcgacatgaggatgtacaag 549 ||||| ||||||||||| || || || |||||||||||| | ||| | | |||||||||| Sbjct: 609 gtcaaggtgagcatggatggtgctccttacctcaggaaggtggacctcaagatgtacaag 668 Query: 550 ggctacagggagctc 564 ||||| ||||||| Sbjct: 669 aactacaaggagctc 683
>emb|BX649494.6| Zebrafish DNA sequence from clone DKEY-173J18 in linkage group 16, complete sequence Length = 175187 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 733 aagttgaggatcatcaagagatc 755 ||||||||||||||||||||||| Sbjct: 19630 aagttgaggatcatcaagagatc 19608
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 358 gggtggccgccggtgaggtcgttcaggaaga 388 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 592 tacgaggacaaggacggcgac 612
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 348 gggtggccgccggtgaggtcgttcaggaaga 378 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 582 tacgaggacaaggacggcgac 602
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 46.1 bits (23), Expect = 0.26 Identities = 29/31 (93%) Strand = Plus / Plus Query: 352 gggtggccgccggtgaggtcgtaccggaaga 382 |||||||||||||||||||||| | |||||| Sbjct: 356 gggtggccgccggtgaggtcgttcaggaaga 386 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgac 681 ||||||||||||||||||||| Sbjct: 590 tacgaggacaaggacggcgac 610
>emb|BX005431.3| Zebrafish DNA sequence from clone CH211-214G2 in linkage group 2, complete sequence Length = 200591 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 733 aagttgaggatcatcaagagatc 755 ||||||||||||||||||||||| Sbjct: 14097 aagttgaggatcatcaagagatc 14075
>emb|CT831234.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018G05, full insert sequence Length = 619 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 204 tacgaggacaaggacggcgactggatgctcgtcggaga 241
>ref|NM_001061335.1| Oryza sativa (japonica cultivar-group) Os05g0178600 (Os05g0178600) mRNA, complete cds Length = 1201 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 635 tacgaggacaaggacggcgactggatgctcgtcggaga 672
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 135087 tacgaggacaaggacggcgactggatgctcgtcggaga 135050
>gb|AY622358.1| Festuca rubra clone RF-150 EST-SRR marker sequence Length = 177 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 96 gtgagcatggacggcgcgccctacct 121
>gb|AY622357.1| Lolium perenne clone PR-150 EST-SRR marker sequence Length = 180 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 99 gtgagcatggacggcgcgccctacct 124
>gb|AY622356.1| Dactylis glomerata clone OG-150 EST-SRR marker sequence Length = 174 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 93 gtgagcatggacggcgcgccctacct 118
>gb|AY622354.1| Lolium temulentum clone LT-150 EST-SRR marker sequence Length = 176 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 95 gtgagcatggacggcgcgccctacct 120
>gb|AY622353.1| Lolium multiflorum clone IR-150 EST-SRR marker sequence Length = 180 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 99 gtgagcatggacggcgcgccctacct 124
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 457 gcagcggcgccggcgagcacca 478 |||||||||||||||||||||| Sbjct: 5066871 gcagcggcgccggcgagcacca 5066892
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Minus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 4624620 tacgaggacaaggacggcgactggatgctcgtcggaga 4624583
>emb|X63762.1|PPA1MHI30 P.platessa mRNA for alpha-microglobulin/HI-30 precursor Length = 1202 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 555 cagggagctcagggaggccctggagg 580 |||||||| ||||||||||||||||| Sbjct: 82 cagggagcacagggaggccctggagg 57
>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0547A06 Length = 150922 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 457 gcagcggcgccggcgagcacca 478 |||||||||||||||||||||| Sbjct: 104428 gcagcggcgccggcgagcacca 104449
>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0020B10 Length = 136175 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 457 gcagcggcgccggcgagcacca 478 |||||||||||||||||||||| Sbjct: 16635 gcagcggcgccggcgagcacca 16656
>gb|AF542555.1| Marchantia polymorpha PAC pMM2D3 RS/SP6 region hypothetical alliin lyase-like protein (M2D3.1), hypothetical protein (M2D3.2), M2D3.3 protein (M2D3.3), and hypothetical protein (M2D3.4) genes, complete cds Length = 39397 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 660 ctacgaggacaaggacggcgacctcatgct 689 |||| ||||||||||||||||| ||||||| Sbjct: 15366 ctacaaggacaaggacggcgacatcatgct 15337
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 637 tacgaggacaaggacggcgactggatgctcgtcggaga 674
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 44.1 bits (22), Expect = 1.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgacctcatgcttgtcggaga 698 ||||||||||||||||||||| ||||| |||||||| Sbjct: 634 tacgaggacaaggacggcgactggatgctcgtcggaga 671
>dbj|AB026823.1| Cucumis sativus CsIAA3 mRNA for Aux/IAA protein, complete cds Length = 540 Score = 44.1 bits (22), Expect = 1.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 335 ccaaggcacaagtcgtagggtggccgccggtgag 368 ||||||||||||| || |||||||| |||||||| Sbjct: 176 ccaaggcacaagttgtggggtggccaccggtgag 209
>gb|AY847064.1| Avena sativa Aux/IAA3 mRNA, partial cds Length = 360 Score = 44.1 bits (22), Expect = 1.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 gtgagcatggacggagcgccctacct 521 |||||||||||||| ||||||||||| Sbjct: 172 gtgagcatggacggtgcgccctacct 197
>tpe|BN000065.1|HSA000065 TPA_inf: Homo sapiens SMP1 gene, RHD gene and RHCE gene Length = 315242 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 ccggcgcttccaacggcggcg 631 ||||||||||||||||||||| Sbjct: 292559 ccggcgcttccaacggcggcg 292539
>gb|AC189266.1| Brassica rapa subsp. pekinensis clone KBrB022L12, complete sequence Length = 101202 Score = 42.1 bits (21), Expect = 4.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 656 tcacctacgaggacaaggacggcgacctcatgcttgtcggagatgttcc 704 ||||||| ||||||||||| || ||| |||||||| ||||||||||| Sbjct: 61841 tcacctatgaggacaaggatggtgactggatgcttgttggagatgttcc 61889
>ref|NM_213462.2| Danio rerio coiled-coil domain containing 49 (ccdc49), mRNA gb|AY648753.1| Danio rerio pate mRNA, complete cds Length = 1934 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aagttcttctccagcgcagca 111 ||||||||||||||||||||| Sbjct: 1438 aagttcttctccagcgcagca 1418
>gb|AC110818.5| Mus musculus BAC clone RP23-198H8 from 16, complete sequence Length = 182807 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ttctccagcgcagcatcttca 117 ||||||||||||||||||||| Sbjct: 61551 ttctccagcgcagcatcttca 61531
>gb|AC074121.16| Homo sapiens BAC clone RP11-725M1 from 7, complete sequence Length = 166379 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagaccagcagcaacaacgcg 450 ||||||||||||||||||||| Sbjct: 160146 gagaccagcagcaacaacgcg 160166
>gb|AC114563.12| Mus musculus chromosome 7, clone RP23-56E5, complete sequence Length = 166508 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 agctaacacaagcaaccacac 23 ||||||||||||||||||||| Sbjct: 50603 agctaacacaagcaaccacac 50623
>gb|AC142295.1| Pan troglodytes BAC clone RP43-80F20 from 7, complete sequence Length = 165071 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 gagaccagcagcaacaacgcg 450 ||||||||||||||||||||| Sbjct: 79348 gagaccagcagcaacaacgcg 79368
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 42.1 bits (21), Expect = 4.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 658 acctacgaggacaaggacggcgacctcatgcttgtcggagatgttccct 706 ||||| ||||||||||| |||||| |||||||| |||||||| |||| Sbjct: 10 acctatgaggacaaggatggcgactggatgcttgttggagatgtcccct 58
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 661 tacgaggacaaggacggcgacctca 685 |||||||||| |||||||||||||| Sbjct: 653 tacgaggacatggacggcgacctca 677
>emb|CR792439.12| Zebrafish DNA sequence from clone DKEYP-100A1 in linkage group 8, complete sequence Length = 170028 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 943 ttgggtcattgaagtaggcct 963 ||||||||||||||||||||| Sbjct: 163380 ttgggtcattgaagtaggcct 163400
>gb|AF039306.2|AF039306 Bradyrhizobium japonicum putative methyltransferase, exoQ-like protein, UDP-hexose transferase (exoU), UDP-hexose transferase (exoM), O-methyl transferase (metA), integral membrane protein (exoP), UDP-hexose transferase (exoT), and UDP-glucose 4'-epimerase (exoB) genes, complete cds; and unknown genes Length = 13070 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 acatcgtcttctcagagagcc 42 ||||||||||||||||||||| Sbjct: 3099 acatcgtcttctcagagagcc 3079
>gb|BC045380.1| Danio rerio coiled-coil domain containing 49, mRNA (cDNA clone MGC:55552 IMAGE:2642768), complete cds Length = 1775 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aagttcttctccagcgcagca 111 ||||||||||||||||||||| Sbjct: 1279 aagttcttctccagcgcagca 1259
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 591 ctgcttctccggggcagacgccggc 615 ||||||||||||||| ||||||||| Sbjct: 269989 ctgcttctccggggcggacgccggc 270013
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 ggagctcagggaggccctggaggcc 582 |||||||| |||||||||||||||| Sbjct: 1782254 ggagctcaaggaggccctggaggcc 1782278
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 acatcgtcttctcagagagcc 42 ||||||||||||||||||||| Sbjct: 8305651 acatcgtcttctcagagagcc 8305631
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ggtggccgccggtgaggtcgt 373 ||||||||||||||||||||| Sbjct: 2717817 ggtggccgccggtgaggtcgt 2717797
>emb|BX649364.3| Human DNA sequence from clone RP5-997I15 on chromosome 1, complete sequence Length = 124581 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ccggcgcttccaacggcggcg 631 ||||||||||||||||||||| Sbjct: 8351 ccggcgcttccaacggcggcg 8371
>emb|BX120016.12| Zebrafish DNA sequence from clone CH211-232H16 in linkage group 2, complete sequence Length = 158139 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aagttcttctccagcgcagca 111 ||||||||||||||||||||| Sbjct: 43860 aagttcttctccagcgcagca 43840
>emb|BX640519.2| Human DNA sequence from clone RP11-157L8 on chromosome 1, complete sequence Length = 186829 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 ccggcgcttccaacggcggcg 631 ||||||||||||||||||||| Sbjct: 128989 ccggcgcttccaacggcggcg 128969
>gb|U17352.1|TAU17352 Thermus aquaticus L-glutamine:D-fructose-6-P amidotransferase (glmS) gene, complete cds and s-layer P100 (slp) gene, partial cds Length = 2560 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 ggagctcagggaggccctggaggcc 582 |||||||| |||||||||||||||| Sbjct: 855 ggagctcaaggaggccctggaggcc 879
>gb|AF079248.1|AF079248 Cymbopogon pospischilii granule-bound starch synthase (waxy) gene, partial cds Length = 1261 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcgccgccggcgactcccagg 246 ||||||||||||||||||||| Sbjct: 1227 tcgccgccggcgactcccagg 1207
>gb|AF079245.1|AF079245 Cymbopogon martinii granule-bound starch synthase (waxy) gene, partial cds Length = 1266 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcgccgccggcgactcccagg 246 ||||||||||||||||||||| Sbjct: 1263 tcgccgccggcgactcccagg 1243
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 ggagctcagggaggccctggaggcc 582 |||||||| |||||||||||||||| Sbjct: 1457988 ggagctcaaggaggccctggaggcc 1458012
>emb|AL031284.9|HS469D22 Human DNA sequence from clone RP3-469D22 on chromosome 1p35.1-36.13, complete sequence Length = 84811 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 ccggcgcttccaacggcggcg 631 ||||||||||||||||||||| Sbjct: 62128 ccggcgcttccaacggcggcg 62108
>emb|AL352978.6|CNS05TBX Human chromosome 14 DNA sequence BAC C-3059L23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141450 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 920 acacatggatgtgtgcccttt 940 ||||||||||||||||||||| Sbjct: 124663 acacatggatgtgtgcccttt 124683
>gb|AY487438.1| Uncultured organism clone 2A14 nitrilase (BD7266) gene, complete cds Length = 1026 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 464 cgccggcgagcaccaacggctcctt 488 |||||||||||| |||||||||||| Sbjct: 748 cgccggcgagcagcaacggctcctt 724 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 160,087,659 Number of extensions: 8910628 Number of successful extensions: 183174 Number of sequences better than 10.0: 114 Number of HSP's gapped: 183167 Number of HSP's successfully gapped: 194 Length of query: 1075 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1052 Effective length of database: 18,503,978,556 Effective search space: 19466185440912 Effective search space used: 19466185440912 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
