ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf72e20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os11g0576400:Os11g0576400 30 1.4
2Os05g0521800:Os05g0521800 30 1.4
3Os12g0116700:Os12g0116700 30 1.8
4AK072732:Os01g0105300 30 1.8
5AK106070:Os06g0302000 29 2.4 
>Os11g0576400:Os11g0576400 |
          Length = 1205
 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 155 ICRSMLAVPSSGCTGGWHVSRAASVMQKKKGKSYRQ 262
           ICR +L+  SSG TG  H+ R A    KK+G   RQ
Sbjct: 226 ICRQILSARSSGGTG--HLKRHAESCAKKQGIQLRQ 259
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>Os05g0521800:Os05g0521800 |
          Length = 657

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +2

Query: 155 ICRSMLAVPSSGCTGGWHVSRAASVMQKKKGKSYRQ 262
           ICR +L+  SSG TG  H+ R A    KK+G   RQ
Sbjct: 108 ICRQILSARSSGGTG--HLKRHAESCAKKQGIQLRQ 141
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>Os12g0116700:Os12g0116700 |
          Length = 491

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 155 ICRSMLAVPSSGCTGGWHVSRAASVMQKKKGKSYRQ 262
           IC++ L+  SSG TG  H+ R A    KK+G   RQ
Sbjct: 86  ICKNKLSAKSSGGTG--HLKRHAEACAKKQGIQLRQ 119
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>AK072732:Os01g0105300 |
          Length = 711

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 155 ICRSMLAVPSSGCTGGWHVSRAASVMQKKKGKSYRQ 262
           IC++ L+  SSG TG  H+ R A    KK+G   RQ
Sbjct: 94  ICKNKLSAKSSGGTG--HLKRHAEACAKKQGIQLRQ 127
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>AK106070:Os06g0302000 |
          Length = 297

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -1

Query: 304 RWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPASGAP--GRRHGKHASTNSRCREPDQ 131
           R R+ D    R L LP R    L HH   PA   A+G P   RR          CR P  
Sbjct: 17  RTRQQDAATGRRLLLPRRPPAGLRHHADHPADDLAAGLPPSPRRRRHPVLRRPLCRRPRH 76

Query: 130 VR 125
           VR
Sbjct: 77  VR 78


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,066,119
Number of extensions: 321267
Number of successful extensions: 678
Number of sequences better than 10.0: 5
Number of HSP's gapped: 677
Number of HSP's successfully gapped: 5
Length of query: 216
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 120
Effective length of database: 11,555,919
Effective search space: 1386710280
Effective search space used: 1386710280
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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