Clone Information

BLAST Search Result

Clone Name	FLbaf72e20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os02g32009:12002.t02844:unspliced-genomic expressed protein	71	7e-12
2	LOC_Os08g03960:12008.t00291:unspliced-genomic retrotransposo...	31	0.83
3	LOC_Os08g09150:12008.t00801:unspliced-genomic retrotransposo...	31	1.0
4	LOC_Os09g31960:12009.t02813:unspliced-genomic retrotransposo...	31	1.1
5	LOC_Os02g46050:12002.t04192:unspliced-genomic retrotransposo...	31	1.1
6	LOC_Os09g26120:12009.t02291:unspliced-genomic retrotransposo...	30	1.3
7	LOC_Os12g19810:12012.t01824:unspliced-genomic retrotransposo...	33	1.9
8	LOC_Os09g11580:12009.t00947:unspliced-genomic retrotransposo...	33	1.9
9	LOC_Os09g04520:12009.t00348:unspliced-genomic retrotransposo...	33	1.9
10	LOC_Os03g20600:12003.t01816:unspliced-genomic expressed protein	33	1.9
11	LOC_Os08g42660:12008.t03995:unspliced-genomic retrotransposo...	30	1.9
12	LOC_Os05g21110:12005.t01872:unspliced-genomic retrotransposo...	30	2.6
13	LOC_Os03g51770:12003.t04506:unspliced-genomic retrotransposo...	29	2.7
14	LOC_Os08g40980:12008.t03828:unspliced-genomic retrotransposo...	30	3.5
15	LOC_Os12g37340:12012.t03414:unspliced-genomic retrotransposo...	32	3.5
16	LOC_Os11g45890:12011.t04114:unspliced-genomic expressed protein	32	3.5
17	LOC_Os07g27720:12007.t02465:unspliced-genomic retrotransposo...	32	3.5
18	LOC_Os06g35460:12006.t03243:unspliced-genomic retrotransposo...	32	3.5
19	LOC_Os05g43350:12005.t03826:unspliced-genomic retrotransposo...	32	3.5
20	LOC_Os05g16700:12005.t01440:unspliced-genomic retrotransposo...	32	3.5
21	LOC_Os04g53280:12004.t04800:unspliced-genomic retrotransposo...	32	3.5
22	LOC_Os03g31650:12003.t02765:unspliced-genomic retrotransposo...	32	3.5
23	LOC_Os12g36790:12012.t03359:unspliced-genomic retrotransposo...	31	3.8
24	LOC_Os01g43820:12001.t03895:unspliced-genomic retrotransposo...	29	4.4
25	LOC_Os05g49560:12005.t04389:unspliced-genomic retrotransposo...	29	4.8
26	LOC_Os11g09329:12011.t00824:unspliced-genomic VHS and GAT do...	32	4.8
27	LOC_Os05g27080:12005.t02360:unspliced-genomic retrotransposo...	32	4.8
28	LOC_Os12g35360:12012.t03224:unspliced-genomic protein transp...	32	4.9
29	LOC_Os12g24430:12012.t02171:unspliced-genomic retrotransposo...	32	4.9
30	LOC_Os09g13750:12009.t01164:unspliced-genomic retrotransposo...	32	4.9
31	LOC_Os08g40810:12008.t03811:unspliced-genomic retrotransposo...	32	4.9
32	LOC_Os08g06880:12008.t00578:unspliced-genomic expressed protein	32	4.9
33	LOC_Os04g10200:12004.t00853:unspliced-genomic retrotransposo...	32	4.9
34	LOC_Os03g23840:12003.t02079:unspliced-genomic retrotransposo...	32	4.9
35	LOC_Os01g60610:12001.t05442:unspliced-genomic retrotransposo...	32	4.9
36	LOC_Os12g19010:12012.t01749:unspliced-genomic retrotransposo...	27	5.0
37	LOC_Os12g33090:12012.t03002:unspliced-genomic nucleic acid b...	24	6.4
38	LOC_Os09g20400:12009.t01774:unspliced-genomic expressed protein	31	6.6
39	LOC_Os09g21130:12009.t01847:unspliced-genomic conserved hypo...	31	6.7
40	LOC_Os07g05740:12007.t00457:unspliced-genomic receptor-like ...	31	6.7
41	LOC_Os03g33280:12003.t02921:unspliced-genomic retrotransposo...	31	6.7
42	LOC_Os03g15160:12003.t01302:unspliced-genomic retrotransposo...	31	6.7
43	LOC_Os02g27650:12002.t02459:unspliced-genomic retrotransposo...	31	6.7
44	LOC_Os11g24350:12011.t02056:unspliced-genomic retrotransposo...	28	7.2
45	LOC_Os05g43420:12005.t03833:unspliced-genomic retrotransposo...	28	8.5
46	LOC_Os07g20200:12007.t01825:unspliced-genomic retrotransposo...	28	8.6
47	LOC_Os09g09370:12009.t00729:unspliced-genomic protein bindin...	31	9.1
48	LOC_Os11g28580:12011.t02470:unspliced-genomic retrotransposo...	31	9.2
49	LOC_Os10g24740:12010.t01899:unspliced-genomic retrotransposo...	31	9.2
50	LOC_Os09g13690:12009.t01158:unspliced-genomic retrotransposo...	31	9.2
51	LOC_Os08g13540:12008.t01231:unspliced-genomic retrotransposo...	31	9.2
52	LOC_Os07g10060:12007.t00880:unspliced-genomic retrotransposo...	31	9.2
53	LOC_Os06g47740:12006.t04460:unspliced-genomic phytosulfokine...	31	9.2
54	LOC_Os06g29300:12006.t02634:unspliced-genomic retrotransposo...	31	9.2
55	LOC_Os05g02700:12005.t00169:unspliced-genomic expressed protein	31	9.2
56	LOC_Os04g44490:12004.t03989:unspliced-genomic retrotransposo...	31	9.2
57	LOC_Os04g43670:12004.t03907:unspliced-genomic expressed protein	31	9.2
58	LOC_Os04g35320:12004.t03203:unspliced-genomic retrotransposo...	31	9.2
59	LOC_Os04g19730:12004.t01713:unspliced-genomic retrotransposo...	31	9.2
60	LOC_Os04g14940:12004.t01311:unspliced-genomic retrotransposo...	31	9.2
61	LOC_Os03g57470:12003.t05014:unspliced-genomic retrotransposo...	31	9.2
62	LOC_Os02g13010:12002.t01098:unspliced-genomic retrotransposo...	31	9.2
63	LOC_Os01g69190:12001.t06272:unspliced-genomic regulatory pro...	31	9.2
64	LOC_Os01g40800:12001.t03602:unspliced-genomic retrotransposo...	31	9.2
65	LOC_Os01g06890:12001.t00570:unspliced-genomic protein kinase...	31	9.2

>LOC_Os02g32009:12002.t02844:unspliced-genomic expressed protein|
          Length = 890
 Score = 71.2 bits (149), Expect = 7e-12
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -2 / -2

                                                   
Query: 312 TDLDGERETWKKGVAFPCR*DLPFFFCITEAALLTCQPPV 193
           TDLDGERETWKKG+AFPCR*DLP FF      LL  +PP+
Sbjct: 514 TDLDGERETWKKGLAFPCR*DLPSFFFCRRRRLLARRPPL 395



 Score = 68.4 bits (143), Expect = 4e-11
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -1 / -1

                                                     
Query: 322 SSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPAS 197
           SSK+ FRWREGDLEER SLPLPIRLAFFLL     PA  P +
Sbjct: 524 SSKNGFRWREGDLEERLSLPLPIRLAFFLLLPPPPPARSPTT 399



 Score = 68.0 bits (142), Expect = 6e-11
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -3 / -3

                                                      
Query: 323 LLQTQI*MERGRPGRKA*PSLADKTCLFSSASLKQPCSHASLR 195
           LLQ +I*MERGRPGRKA*PSLADKTCL SS++    CS A  R
Sbjct: 525 LLQKRI*MERGRPGRKA*PSLADKTCLLSSSAAAAACSLADHR 397



 Score = 67.5 bits (141), Expect = 8e-11
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2 / +3

                                                    
Query: 194 TGGWHVSRAASVMQKKKGKSYRQGKATPFFQVSLSPSKSVF 316
           +GG   SR     +KK+GKSYRQGKA PFFQVSLSPSKSVF
Sbjct: 396 SGGRRASRRRRRQKKKEGKSYRQGKAKPFFQVSLSPSKSVF 518



 Score = 62.9 bits (131), Expect = 2e-09
 Identities = 29/40 (72%), Positives = 31/40 (77%)
 Frame = +1 / +2

                                                   
Query: 205 ACEQGCFSDAEEKRQVLSAREGYAFLPGLPLSI*ICVWRR 324
           A EQ   +  EE+RQVLSAREG AFLPGLPLSI*I  WRR
Sbjct: 407 ASEQAAAAAEEERRQVLSAREG*AFLPGLPLSI*IRFWRR 526

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>LOC_Os08g03960:12008.t00291:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2440

 Score = 30.9 bits (61), Expect(2) = 0.83
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2211 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2080



 Score = 24.4 bits (47), Expect(2) = 0.83
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                       
Query: 208 MPASGAPGRRHG 173
           +PAS +PGRR G
Sbjct: 421 LPASSSPGRRQG 386

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>LOC_Os08g09150:12008.t00801:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3142

 Score = 30.9 bits (61), Expect(2) = 1.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2856 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2725



 Score = 24.4 bits (47), Expect(2) = 1.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRRQG 1031

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>LOC_Os09g31960:12009.t02813:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3291

 Score = 30.9 bits (61), Expect(2) = 1.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3005 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2874



 Score = 24.4 bits (47), Expect(2) = 1.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1065 LPASSSPGRRQG 1030

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>LOC_Os02g46050:12002.t04192:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3291

 Score = 30.9 bits (61), Expect(2) = 1.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3005 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2874



 Score = 24.4 bits (47), Expect(2) = 1.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1065 LPASSSPGRRQG 1030

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>LOC_Os09g26120:12009.t02291:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2887

 Score = 30.4 bits (60), Expect(2) = 1.3
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2601 IVPSSSSGSRWRVPAISERRWARPP*LAAYFAVRPPQRPACRPA 2470



 Score = 24.4 bits (47), Expect(2) = 1.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                       
Query: 208 MPASGAPGRRHG 173
           +PAS +PGRR G
Sbjct: 811 LPASSSPGRRQG 776

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>LOC_Os12g19810:12012.t01824:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 7048

 Score = 33.1 bits (66), Expect = 1.9
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +2 / -3

                                                              
Query: 482 RCVLAVSQLVKRRCVSLTSPLE*GVTVTE*ECKCPILYVLLCPIVTCTLCC 634
           +C+   ++LV  R   ++SP+   +     +  CPI   + C  V+C   C
Sbjct: 245 KCLTRAARLVSMRATDVSSPVSLVLVAICVDSNCPIFSFVTCKSVSCPSVC 93

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>LOC_Os09g11580:12009.t00947:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 9462

 Score = 33.1 bits (66), Expect = 1.9
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1 / +3

                                   
Query: 220  SPAHMPASGAPGRRHGKHASTNS 152
            SPA M +S  PGRR G  AST+S
Sbjct: 3357 SPASMTSSSLPGRRFGSAASTSS 3425

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>LOC_Os09g04520:12009.t00348:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3492

 Score = 33.1 bits (66), Expect = 1.9
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1 / +2

                                  
Query: 220 SPAHMPASGAPGRRHGKHASTNS 152
           SPA M +S  PGRR G  AST+S
Sbjct: 11  SPASMTSSSLPGRRFGSAASTSS 79

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>LOC_Os03g20600:12003.t01816:unspliced-genomic expressed protein|
          Length = 774

 Score = 33.1 bits (66), Expect = 1.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1 / -1

                                  
Query: 277 RRSLPLPIRLAFFLLHH*SSPAH 209
           RR LP+P+R    L HH +SP H
Sbjct: 234 RRRLPVPVRAPLSLRHHRASPVH 166

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>LOC_Os08g42660:12008.t03995:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3142

 Score = 29.9 bits (59), Expect(2) = 1.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2856 IVPSSSSGSRWRVLAISERRWARPPWLAAYFTVRPPQRPACRPA 2725



 Score = 24.4 bits (47), Expect(2) = 1.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRRQG 1031

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>LOC_Os05g21110:12005.t01872:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3227

 Score = 30.4 bits (60), Expect(2) = 2.6
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            +  SS    RWR   + ERR    P   A+F  H    PA  PA
Sbjct: 2941 IVSSSSSGSRWRAPAISERRWARPPWLAAYFACHPPKRPACRPA 2810



 Score = 23.5 bits (45), Expect(2) = 2.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1 / -2

                       
Query: 205  PASGAPGRRHG 173
            PAS +PGRR G
Sbjct: 1063 PASSSPGRRQG 1031

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>LOC_Os03g51770:12003.t04506:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3441

 Score = 29.5 bits (58), Expect(2) = 2.7
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + E+R    P   A+F +     PA  PA
Sbjct: 3155 IVPSSSSGSRWRVPAISEKRWARPPWLAAYFTVRPPQRPACRPA 3024



 Score = 24.4 bits (47), Expect(2) = 2.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -3

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRRQG 1031

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>LOC_Os08g40980:12008.t03828:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3225

 Score = 29.9 bits (59), Expect(2) = 3.5
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1 / -2

                                                     
Query: 322  SSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            SS  R RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2930 SSSSRSRWRVPAISERRWARPPWLAAYFAVRSPQRPACRPA 2808



 Score = 23.5 bits (45), Expect(2) = 3.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1 / -1

                       
Query: 205  PASGAPGRRHG 173
            PAS +PGRR G
Sbjct: 1062 PASSSPGRRQG 1030

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>LOC_Os12g37340:12012.t03414:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6099

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSRPGRRFGSAASTSS 79

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>LOC_Os11g45890:12011.t04114:unspliced-genomic expressed protein|
          Length = 1772

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2 / -3

                                              
Query: 213 LTCQPPVHPEEGTASMLLQIHAAESLTRYVAAACS 109
           L   PP HP  G AS+L    ++ S++R VAAA S
Sbjct: 489 LAAPPPPHPSSGHASVLGTGGSSGSVSRQVAAAWS 385

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>LOC_Os07g27720:12007.t02465:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3572

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSLPGRRSGSAASTSS 79

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>LOC_Os06g35460:12006.t03243:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 3915

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSRPGRRFGSAASTSS 79

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>LOC_Os05g43350:12005.t03826:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 4824

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSLPGRRSGSAASTSS 79

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>LOC_Os05g16700:12005.t01440:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 1785

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSRPGRRFGSAASTSS 79

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>LOC_Os04g53280:12004.t04800:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6090

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSRPGRRFGSAASTSS 79

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>LOC_Os03g31650:12003.t02765:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 5049

 Score = 32.2 bits (64), Expect = 3.5
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSLPGRRSGSAASTSS 79

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>LOC_Os12g36790:12012.t03359:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3597

 Score = 30.9 bits (61), Expect(2) = 3.8
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -1

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3006 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2875



 Score = 22.6 bits (43), Expect(2) = 3.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -3

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRR*G 1031

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>LOC_Os01g43820:12001.t03895:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3037

 Score = 29.5 bits (58), Expect(2) = 4.4
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            +  SS    RWR   + ERR    P   A+F +     PA+ PA
Sbjct: 2751 IVSSSSSGSRWRVPAISERRWARPPWLAAYFAVRPPQRPAYRPA 2620



 Score = 23.5 bits (45), Expect(2) = 4.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1 / -1

                      
Query: 205 PASGAPGRRHG 173
           PAS +PGRR G
Sbjct: 874 PASSSPGRRQG 842

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>LOC_Os05g49560:12005.t04389:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4652

 Score = 29.0 bits (57), Expect(2) = 4.8
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -1

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            +A SS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2849 IASSSSSGSRWRVPAISERRWARPPWLAAYFAVRPPQRPACRPA 2718



 Score = 24.4 bits (47), Expect(2) = 4.8
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1 / -2

                             
Query: 223  SSPAHMPASGAPGRRHG 173
            SSP H      PG RHG
Sbjct: 1054 SSPGHRQGGYPPGPRHG 1004

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>LOC_Os11g09329:12011.t00824:unspliced-genomic VHS and GAT domain protein, putative, expressed|
          Length = 12864

 Score = 31.8 bits (63), Expect = 4.8
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3 / +2

                                                 
Query: 221  QPCSHASLRCTRKKARQACFYKFTLPRA*PGT*QQRA 111
            QPCSHASLR    +A Q    + ++P   P   QQ A
Sbjct: 2756 QPCSHASLRGCCPRASQQTVLEQSIPTNCPRASQQTA 2866

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>LOC_Os05g27080:12005.t02360:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 10053

 Score = 31.8 bits (63), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3 / +3

                                    
Query: 263  LADKTCLFSSASLKQPCSHASLRC 192
            +A++ C FSS  L  PC + + RC
Sbjct: 1530 VANRVCFFSSGGLSGPCRNGNCRC 1601

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>LOC_Os12g35360:12012.t03224:unspliced-genomic protein transporter, putative, expressed|
          Length = 7020

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2 / +3

                                  
Query: 575  CKCPILYVLLCPIVTCTLCCSK 640
            CKC ++Y  LC ++ CT  C K
Sbjct: 4695 CKCTLVYSALCVLLFCTS*CQK 4760

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>LOC_Os12g24430:12012.t02171:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2967

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSHPGRRFGSAASTSS 79

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>LOC_Os09g13750:12009.t01164:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6727

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1 / -1

                                              
Query: 139  ALGSVNL*KHACRAFFRVHRRLACEQGCFSDAEE 240
            AL SV L  H  +   R+HR +   +G ++DAEE
Sbjct: 2557 ALHSVQLLPHGMQPIQRIHRVVGAREGGWTDAEE 2456

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>LOC_Os08g40810:12008.t03811:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 936

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1 / -2

                                                       
Query: 331 VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
           + PSS    RWR   + ERR    P   A+F++     PA  PA
Sbjct: 650 IVPSSSSGSRWRVPAISERRWARPPWLAAYFVVRPPQRPACRPA 519

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>LOC_Os08g06880:12008.t00578:unspliced-genomic expressed protein|
          Length = 3158

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1 / +1

                                         
Query: 232  AEEKRQVLSAREGYAFLPGLPLSI*ICVW 318
            AE++ ++LS  + Y   P LPL + IC W
Sbjct: 2098 AEDRDKLLSFEDVYRSSPSLPLMLHICTW 2184

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>LOC_Os04g10200:12004.t00853:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6099

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSHPGRRFGSAASTSS 79

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>LOC_Os03g23840:12003.t02079:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6720

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1 / -1

                                              
Query: 139  ALGSVNL*KHACRAFFRVHRRLACEQGCFSDAEE 240
            AL SV L  H  +   R+HR +   +G ++DAEE
Sbjct: 2550 ALHSVQLLPHGMQPIQRIHRVVGAREGRWADAEE 2449

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>LOC_Os01g60610:12001.t05442:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3217

 Score = 31.8 bits (63), Expect = 4.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            +  SS  R RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2931 IVSSSSSRSRWRVPAISERRWARTPWLAAYFAIRPPQRPACRPA 2800

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>LOC_Os12g19010:12012.t01749:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2470

 Score = 27.2 bits (53), Expect(2) = 5.0
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            +  SS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2184 IVSSSSSGSRWRVPAISERRWARPPWLAAYFAVRPPQRPACRPA 2053



 Score = 25.4 bits (49), Expect(2) = 5.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1 / -1

                        
Query: 211 HMPASGAPGRRHG 173
           ++PAS +PGRR G
Sbjct: 334 YLPASSSPGRRQG 296

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>LOC_Os12g33090:12012.t03002:unspliced-genomic nucleic acid binding protein, putative, expressed|
          Length = 1915

 Score = 24.4 bits (47), Expect(2) = 6.4
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1 / -1

                                       
Query: 337  LTVAPSSKHRFRWREGDLEERRSLPLP 257
            LT    S  R  WR G    RRS P P
Sbjct: 1219 LTAQAPSPSRTGWRRGRRRGRRSPPPP 1139



 Score = 24.0 bits (46), Expect(2) = 6.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1 / -2

                                
Query: 223  SSPAHMPASGAPGRRHGKHA 164
            + PA +   GAPG+   +HA
Sbjct: 1086 AQPAQVEVPGAPGQAERRHA 1027

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>LOC_Os09g20400:12009.t01774:unspliced-genomic expressed protein|
          Length = 4116

 Score = 31.3 bits (62), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3 / -2

                                             
Query: 224  KQPCSHASLRCTRKKARQACFYKFTLPRA*PGT 126
            KQP S   +R TR   R+AC  + T  R+ PGT
Sbjct: 2339 KQPLSIKQIRSTRAWQRKACRIQRTKSRSLPGT 2241

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>LOC_Os09g21130:12009.t01847:unspliced-genomic conserved hypothetical protein|
          Length = 776

 Score = 31.3 bits (62), Expect = 6.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2 / -3

                                            
Query: 216 LLTCQPPVHPEEGTASMLLQIHAAESLTRYVAA 118
           +L   PP HP  G AS+L    ++ S++R VAA
Sbjct: 255 VLAAPPPPHPSSGRASVLGTGGSSSSVSRQVAA 157

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>LOC_Os07g05740:12007.t00457:unspliced-genomic receptor-like protein kinase precursor, putative, expressed|
          Length = 4699

 Score = 31.3 bits (62), Expect = 6.7
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1 / +2

                                        
Query: 223  SSPAHMPASGAPGRRHGKHASTNSRCRE 140
            SSPA  PAS A  RR G   S+ + C+E
Sbjct: 1268 SSPASSPASSAGFRRSGCSTSSRTGCKE 1351

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>LOC_Os03g33280:12003.t02921:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 4004

 Score = 31.3 bits (62), Expect = 6.7
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSSLPGRRSGLAASTSS 79

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>LOC_Os03g15160:12003.t01302:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 6725

 Score = 31.3 bits (62), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1 / -1

                                              
Query: 139  ALGSVNL*KHACRAFFRVHRRLACEQGCFSDAEE 240
            AL SV L  H  +   R+HR +   +G ++DAEE
Sbjct: 2555 ALHSVQLLPHGMQPIQRIHRVVGARKGGWADAEE 2454

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>LOC_Os02g27650:12002.t02459:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2965

 Score = 31.3 bits (62), Expect = 6.7
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   A   PGRR G  AST+S
Sbjct: 8   SSPASTTAPSLPGRRSGSAASTSS 79

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>LOC_Os11g24350:12011.t02056:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 7567

 Score = 28.1 bits (55), Expect(2) = 7.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1 / -3

                                     
Query: 280  ERRSLPLPIRLAFFLLHH*SSPAHM 206
            ERR+ P P    FFL  H SS +H+
Sbjct: 2102 ERRTTPSPSGFPFFLPPHLSSASHL 2028



 Score = 25.4 bits (49), Expect(2) = 7.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1 / -3

                                            
Query: 493  QHTSFN*LTHSRHTDELTHEHSH*LTQLTIIM 398
            QHTS  *L H  H+D +     H*L  L + M
Sbjct: 6854 QHTSTE*LPHPYHSDSIHIYLPH*LGGLQM*M 6759

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>LOC_Os05g43420:12005.t03833:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3292

 Score = 27.6 bits (54), Expect(2) = 8.5
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + P S    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3006 IVPLSSSGSRWRVPAISERRWARPP*LAAYFTVRPPQRPACRPA 2875



 Score = 24.4 bits (47), Expect(2) = 8.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRRQG 1031

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>LOC_Os07g20200:12007.t01825:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3301

 Score = 27.6 bits (54), Expect(2) = 8.6
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1 / -2

                                                     
Query: 322  SSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            SS    RWR   + ERR    P   A+F++     PA  PA
Sbjct: 3006 SSSSGSRWRVPAISERRWARPPWLAAYFIVRPPQRPACRPA 2884



 Score = 24.4 bits (47), Expect(2) = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1 / -1

                        
Query: 208  MPASGAPGRRHG 173
            +PAS +PGRR G
Sbjct: 1066 LPASSSPGRRQG 1031

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>LOC_Os09g09370:12009.t00729:unspliced-genomic protein binding protein, putative, expressed|
          Length = 7707

 Score = 30.9 bits (61), Expect = 9.1
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3 / -2

                                   
Query: 129  TWSGSRQREFVEACLPCLLPGAP 197
            T SGSR      +C PC  PGAP
Sbjct: 7016 TASGSRSSGIAASCPPCSAPGAP 6948

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>LOC_Os11g28580:12011.t02470:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2616

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1 / +2

                                  
Query: 220 SPAHMPASGAPGRRHGKHASTNS 152
           SPA M +S  PGR  G  AST+S
Sbjct: 11  SPASMTSSSLPGRHFGSAASTSS 79

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>LOC_Os10g24740:12010.t01899:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 657

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSFLPGRRFGSAASTSS 79

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>LOC_Os09g13690:12009.t01158:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3292

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3006 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2875

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>LOC_Os08g13540:12008.t01231:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2817

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1 / +2

                                   
Query: 223 SSPAHMPASGAPGRRHGKHASTNS 152
           SSPA   +S  PGRR G  AST+S
Sbjct: 8   SSPASTTSSFLPGRRSGSAASTSS 79

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>LOC_Os07g10060:12007.t00880:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3141

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2855 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2724

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>LOC_Os06g47740:12006.t04460:unspliced-genomic phytosulfokine receptor precursor, putative|
          Length = 3192

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1 / -3

                                   
Query: 205  PASGAPGRRHGKHASTNSRCREP 137
            PA+ A  RRHG  A++   CR P
Sbjct: 2641 PAAAARHRRHGSRAASRGGCRSP 2573

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>LOC_Os06g29300:12006.t02634:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 7558

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -1 / -3

                                                    
Query: 499  HSQHTSFN*LTHSRHTDELTHEHSH*LTQLTIIM*LKNSR 380
            + QHTS  *L H  H D +    SH*L  L + M  + SR
Sbjct: 3410 YHQHTSTE*LPHPHHGDSIHIYLSH*LRSLQMSMFYQISR 3291

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>LOC_Os05g02700:12005.t00169:unspliced-genomic expressed protein|
          Length = 1457

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1 / -3

                                    
Query: 325 PSSKHRFRWREGDLEERRSLPLPIR 251
           P+++ R RW EG +E +    LP+R
Sbjct: 432 PTARSRMRWLEGGMERQMYTALPVR 358

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>LOC_Os04g44490:12004.t03989:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4619

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 4480 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 4349

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>LOC_Os04g43670:12004.t03907:unspliced-genomic expressed protein|
          Length = 2154

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1 / -1

                                                
Query: 250 LAFFLLHH*SSPAHMPASGAPGRRHGKHASTNSRCRE 140
           + F LLHH +SP H P  G  G    +     S+  E
Sbjct: 219 IVFLLLHHVASPVHPPIYGLEGEGRAEEEEEASQGAE 109

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>LOC_Os04g35320:12004.t03203:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3010

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2724 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2593

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>LOC_Os04g19730:12004.t01713:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3283

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2997 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2866

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>LOC_Os04g14940:12004.t01311:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3292

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 3006 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2875

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>LOC_Os03g57470:12003.t05014:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3141

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2855 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2724

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>LOC_Os02g13010:12002.t01098:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3280

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2994 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2863

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>LOC_Os01g69190:12001.t06272:unspliced-genomic regulatory protein, putative, expressed|
          Length = 2285

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1 / -2

                                                 
Query: 238 LLHH*SSPAHMPASGAPGRRHGKHASTNSRCREPDQVR 125
           ++HH  S    PAS +P R  G+ A+T++  R     R
Sbjct: 196 MIHHSPSSTRSPASRSPCRTRGRRAATSAARRRRGTTR 83

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>LOC_Os01g40800:12001.t03602:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3084

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1 / -2

                                                        
Query: 331  VAPSSKHRFRWREGDLEERRSLPLPIRLAFFLLHH*SSPAHMPA 200
            + PSS    RWR   + ERR    P   A+F +     PA  PA
Sbjct: 2855 IVPSSSSGSRWRVPAISERRWARPPWLAAYFTVRPPQRPACRPA 2724

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>LOC_Os01g06890:12001.t00570:unspliced-genomic protein kinase/ protein binding protein, putative, expressed|
          Length = 3226

 Score = 30.9 bits (61), Expect = 9.2
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +2 / +2

                                                                       
Query: 119 AATYLVRLSAA*ICRSMLAVPSSGCTGGWHVSRAASVMQKKKGKSYRQGKATPFFQVSLS 298
           AA  L  +SAA  CR+      S  +  W +S +A+    + G        +P   +S S
Sbjct: 272 AAAPLPSISAAAACRAAALTLPSSASRRWGISTSAATTSTRHGSRPSGSSGSPS*PISTS 451

            
Query: 299 P 301
           P
Sbjct: 452 P 454


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 249,426,993
Number of extensions: 3837644
Number of successful extensions: 15724
Number of sequences better than 10.0: 65
Length of query: 216
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 168
Effective length of database: 52,912,542
Effective search space: 8889307056
Effective search space used: 8889307056
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result