ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf78m06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100534:Os03g0214900 | 30 | 0.38 | 2 | AK120476:Os01g0827200 | 28 | 1.4 | 3 | AK073922:Os01g0827200 | 28 | 1.4 | 4 | AK119853: | 27 | 3.2 | 5 | AK099887:Os01g0316500 | 27 | 3.2 | 6 | AK064158:Os01g0283500 | 27 | 3.2 | 7 | AK109979: | 26 | 5.5 | 8 | AK105155:Os01g0267100 | 26 | 5.5 | 9 | AK103971:Os06g0142800 | 26 | 5.5 | 10 | AK073269:Os06g0142800 | 26 | 5.5 | 11 | Os11g0169600:Os11g0169600 | 25 | 9.4 | 12 | Os02g0104700:Os02g0104700 | 25 | 9.4 | 13 | AK102859:Os08g0528700 | 25 | 9.4 | 14 | AK073451:Os07g0633200 | 25 | 9.4 | 15 | AK061338:Os07g0633200 | 25 | 9.4 |
|---|
>AK100534:Os03g0214900 | Length = 979 Score = 30.0 bits (66), Expect = 0.38 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 236 PGSITPTRLRPFSFSPVQSREESAPPP 156 PGS+ P RP SF+P + S+PPP Sbjct: 116 PGSLPPPPPRPPSFAPENALPPSSPPP 142
>AK120476:Os01g0827200 | Length = 540 Score = 28.1 bits (61), Expect = 1.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 Query: 230 SITPTRLRPFSFSPVQSREESAPPPHGSIGVG 135 S TP RL P S P + R +S+PPP G VG Sbjct: 9 SQTP-RLHPESHFPSRPRPQSSPPPPGPAMVG 39
>AK073922:Os01g0827200 | Length = 539 Score = 28.1 bits (61), Expect = 1.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -1 Query: 230 SITPTRLRPFSFSPVQSREESAPPPHGSIGVG 135 S TP RL P S P + R +S+PPP G VG Sbjct: 8 SQTP-RLHPESHFPSRPRPQSSPPPPGPAMVG 38
>AK119853: | Length = 870 Score = 26.9 bits (58), Expect = 3.2 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 236 PGSITPTRLRPFSFSPVQSREESAPPPH 153 PGS++ + ++ SP+Q SAPP H Sbjct: 724 PGSVSGSAYGAYASSPLQPSHLSAPPAH 751
>AK099887:Os01g0316500 | Length = 246 Score = 26.9 bits (58), Expect = 3.2 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = +1 Query: 133 TPTP-MDPWGGGALSSLLWTGEKEKGRRRVG 222 TPTP + GGG S W G +++ RR G Sbjct: 55 TPTPPLSASGGGGGGSFRWLGPRKRRRRGAG 85
>AK064158:Os01g0283500 | Length = 350 Score = 26.9 bits (58), Expect = 3.2 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = -2 Query: 145 SASGSLARWRVGFERALL*AGSTAGERPGKALSSTSNERDGAR 17 S G RW VGF + L +G G P + + R+ R Sbjct: 248 SGIGKAVRWPVGFVQKLFRSGRPQGYTPSRGRVGRGSARENGR 290
>AK109979: | Length = 934 Score = 26.2 bits (56), Expect = 5.5 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -1 Query: 236 PGSITPTRLRPFSFSPVQSREESAPP 159 PG TPT RP S +P + + + PP Sbjct: 407 PGPPTPTHTRPPSAAPTPALQSANPP 432
>AK105155:Os01g0267100 | Length = 172 Score = 26.2 bits (56), Expect = 5.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 257 ILFYKKDPGSITPTRLRPFSFSPVQSREESAPPPHG 150 +L + + P S +P R R S SP R+ S+ HG Sbjct: 35 LLPHPRTPESSSPARGRQVSSSPAGGRQASSSTAHG 70 Score = 25.4 bits (54), Expect = 9.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 236 PGSITPTRLRPFSFSPVQSREESAPP 159 P +P R RP S SPV++ S PP Sbjct: 145 PVGSSPARGRPASSSPVRAPSPSPPP 170
>AK103971:Os06g0142800 | Length = 380 Score = 26.2 bits (56), Expect = 5.5 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 251 KESFFLTYFCTVIYFHKAQRLICKK 325 KE F YFCT Y + + ++C + Sbjct: 25 KEVDFANYFCTYSYLYHQKEMLCDR 49
>AK073269:Os06g0142800 | Length = 380 Score = 26.2 bits (56), Expect = 5.5 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +2 Query: 251 KESFFLTYFCTVIYFHKAQRLICKK 325 KE F YFCT Y + + ++C + Sbjct: 25 KEVDFANYFCTYSYLYHQKEMLCDR 49
>Os11g0169600:Os11g0169600 | Length = 428 Score = 25.4 bits (54), Expect = 9.4 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -1 Query: 287 SQYKNK*EKMILFYKKD---PGSITPTRLRPFSFSPVQSREESAPPPHGSIGVGV 132 S+ KN+ K +L D P P S SP + + PPP G++ VGV Sbjct: 146 SEAKNRQGKPVLVQVPDLSVPSLYHTPLSSPSSKSPRRPQPPPIPPPAGNVVVGV 200
>Os02g0104700:Os02g0104700 | Length = 547 Score = 25.4 bits (54), Expect = 9.4 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = -1 Query: 206 PFSFSPVQSREESAPPPHGS 147 P SFSP ++ + PPP G+ Sbjct: 29 PSSFSPTRAASTAPPPPEGA 48
>AK102859:Os08g0528700 | Length = 187 Score = 25.4 bits (54), Expect = 9.4 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = -1 Query: 221 PTRLR-----PFSFSPVQSREESAPPPHGS 147 P+R R P S SP ++ S+PP HGS Sbjct: 65 PSRTRCSPSSPGSASPARTSPRSSPPSHGS 94
>AK073451:Os07g0633200 | Length = 213 Score = 25.4 bits (54), Expect = 9.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 215 RLRPFSFSPVQSREESAPPPHGSIGVG 135 R+R S+SPV+SR S P G G Sbjct: 175 RMRERSYSPVESRSRSRSPVEEGYGGG 201
>AK061338:Os07g0633200 | Length = 213 Score = 25.4 bits (54), Expect = 9.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 215 RLRPFSFSPVQSREESAPPPHGSIGVG 135 R+R S+SPV+SR S P G G Sbjct: 175 RMRERSYSPVESRSRSRSPVEEGYGGG 201 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 7,855,040 Number of extensions: 151083 Number of successful extensions: 584 Number of sequences better than 10.0: 15 Number of HSP's gapped: 584 Number of HSP's successfully gapped: 16 Length of query: 112 Length of database: 15,399,855 Length adjustment: 81 Effective length of query: 31 Effective length of database: 12,156,534 Effective search space: 376852554 Effective search space used: 376852554 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
