ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf78m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q92075:SCNNA_CHICK Amiloride-sensitive sodium channel subunit al... 28 9.7
2Q86W56:PARG_HUMAN Poly(ADP-ribose) glycohydrolase - Homo sapiens... 28 9.7

>Q92075:SCNNA_CHICK Amiloride-sensitive sodium channel subunit alpha - Gallus gallus|
           (Chicken)
          Length = 637
 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 242 FYKKESFFLTYFCTVIYFHKAQRLICKKKKKI 337
           FY        +FC+    H A RL+C KK K+
Sbjct: 43  FYGSYQDVFQFFCSNTTIHGAIRLVCSKKNKM 74



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>Q86W56:PARG_HUMAN Poly(ADP-ribose) glycohydrolase - Homo sapiens (Human)|
          Length = 976

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 45  DESALPGLSPAVDPA*SRARSKPTRQRARDPDAD 146
           DE   PG     D + S+  +KP+R +ARD D +
Sbjct: 319 DEETSPGFDEQEDGSSSQTANKPSRFQARDADIE 352


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 46,891,128
Number of extensions: 817803
Number of successful extensions: 1876
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1875
Number of HSP's successfully gapped: 2
Length of query: 112
Length of database: 100,686,439
Length adjustment: 80
Effective length of query: 32
Effective length of database: 78,742,839
Effective search space: 2519770848
Effective search space used: 2519770848
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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