| Clone Name | FLbaf78j18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK241496.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065167G16, full insert sequence Length = 1348 Score = 329 bits (166), Expect = 1e-86 Identities = 628/782 (80%) Strand = Plus / Plus Query: 201 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 260 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 317 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 376 Query: 261 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 320 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 377 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 436 Query: 321 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 380 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 437 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 496 Query: 381 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 440 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 497 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 556 Query: 441 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 500 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 557 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 616 Query: 501 gcatgcccaacagagctgattaagtgcaggttgcaggcccagagctctttagctgaagca 560 || |||||||| ||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 617 gcttgcccaactgagctcatcaagtgcaggttgcaggcccagagtgctttagccgaggca 676 Query: 561 ggtgctgtctccggcgtggcgcttcccaaagggccaatggatgtggcaaggcatgtcata 620 | ||||| || ||||| || || |||||||| ||||| |||||||||| ||| ||| | Sbjct: 677 gctgctgcttctggcgtagccctacccaaaggaccaattgatgtggcaaagcacgtcgtc 736 Query: 621 agggacgccggcctcaaaggactgttcaagggcatcgtcccgacaatgggccgtgagatc 680 ||||| |||||| | || || ||||||||||| | ||||| ||||||||||| ||| | Sbjct: 737 agggaagccggcatgaagggtttgttcaagggccttgtccctacaatgggccgcgaggtt 796 Query: 681 cccggcaacgccataatgttcggtgtgtacgaggccgtcaagcagtacatggccggcggc 740 || ||||| ||| | ||||| |||||||| || | | |||||||||| | ||||| || Sbjct: 797 cctggcaatgccgtgatgtttggtgtgtatgaaggcaccaagcagtacctcgccggtggt 856 Query: 741 cgggacacgtcaggcctcggccagggctctctcatcctcgccggggggctcgccggaggg 800 | |||||| ||| ||||||| ||||||||||||||| |||| || || || || | | Sbjct: 857 caggacacatcaaacctcggcaggggctctctcatcctatccggaggccttgctggggcg 916 Query: 801 gcgctgtggctcacggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgac 860 | | | |||||| |||| ||||| ||||||||||| ||||||||||| |||||||| ||| Sbjct: 917 gtgttctggctctcggtttaccctaccgacgtcgtgaagagcgtgattcaggtggatgac 976 Query: 861 tacaagaagccgaggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgac 920 ||||||||||| |||||||| ||||| ||||||| || ||||||| |||||||||| Sbjct: 977 tacaagaagccaaggtactcagggtcagtcgacgctttcaagaagattctcgcggccgat 1036 Query: 921 ggggtcaagggcctgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaat 980 || || |||||| ||||||||||||| || || |||||||| || || |||||||| ||| Sbjct: 1037 ggagtgaagggcttgtacaaggggtttggacctgccatggctcgtagtgtcccggccaat 1096 Query: 981 gc 982 || Sbjct: 1097 gc 1098
>ref|NM_001072004.1| Oryza sativa (japonica cultivar-group) Os10g0573800 (Os10g0573800) mRNA, complete cds Length = 891 Score = 329 bits (166), Expect = 1e-86 Identities = 628/782 (80%) Strand = Plus / Plus Query: 201 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 260 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 64 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 123 Query: 261 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 320 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 124 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 183 Query: 321 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 380 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 184 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 243 Query: 381 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 440 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 244 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 303 Query: 441 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 500 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 304 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 363 Query: 501 gcatgcccaacagagctgattaagtgcaggttgcaggcccagagctctttagctgaagca 560 || |||||||| ||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 364 gcttgcccaactgagctcatcaagtgcaggttgcaggcccagagtgctttagccgaggca 423 Query: 561 ggtgctgtctccggcgtggcgcttcccaaagggccaatggatgtggcaaggcatgtcata 620 | ||||| || ||||| || || |||||||| ||||| |||||||||| ||| ||| | Sbjct: 424 gctgctgcttctggcgtagccctacccaaaggaccaattgatgtggcaaagcacgtcgtc 483 Query: 621 agggacgccggcctcaaaggactgttcaagggcatcgtcccgacaatgggccgtgagatc 680 ||||| |||||| | || || ||||||||||| | ||||| ||||||||||| ||| | Sbjct: 484 agggaagccggcatgaagggtttgttcaagggccttgtccctacaatgggccgcgaggtt 543 Query: 681 cccggcaacgccataatgttcggtgtgtacgaggccgtcaagcagtacatggccggcggc 740 || ||||| ||| | ||||| |||||||| || | | |||||||||| | ||||| || Sbjct: 544 cctggcaatgccgtgatgtttggtgtgtatgaaggcaccaagcagtacctcgccggtggt 603 Query: 741 cgggacacgtcaggcctcggccagggctctctcatcctcgccggggggctcgccggaggg 800 | |||||| ||| ||||||| ||||||||||||||| |||| || || || || | | Sbjct: 604 caggacacatcaaacctcggcaggggctctctcatcctatccggaggccttgctggggcg 663 Query: 801 gcgctgtggctcacggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgac 860 | | | |||||| |||| ||||| ||||||||||| ||||||||||| |||||||| ||| Sbjct: 664 gtgttctggctctcggtttaccctaccgacgtcgtgaagagcgtgattcaggtggatgac 723 Query: 861 tacaagaagccgaggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgac 920 ||||||||||| |||||||| ||||| ||||||| || ||||||| |||||||||| Sbjct: 724 tacaagaagccaaggtactcagggtcagtcgacgctttcaagaagattctcgcggccgat 783 Query: 921 ggggtcaagggcctgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaat 980 || || |||||| ||||||||||||| || || |||||||| || || |||||||| ||| Sbjct: 784 ggagtgaagggcttgtacaaggggtttggacctgccatggctcgtagtgtcccggccaat 843 Query: 981 gc 982 || Sbjct: 844 gc 845
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 226 bits (114), Expect = 2e-55 Identities = 372/458 (81%) Strand = Plus / Minus Query: 525 tgcaggttgcaggcccagagctctttagctgaagcaggtgctgtctccggcgtggcgctt 584 |||||||||||||||||||| ||||||| || |||| ||||| || ||||| || || Sbjct: 22258376 tgcaggttgcaggcccagagtgctttagccgaggcagctgctgcttctggcgtagcccta 22258317 Query: 585 cccaaagggccaatggatgtggcaaggcatgtcataagggacgccggcctcaaaggactg 644 |||||||| ||||| |||||||||| ||| ||| | ||||| |||||| | || || || Sbjct: 22258316 cccaaaggaccaattgatgtggcaaagcacgtcgtcagggaagccggcatgaagggtttg 22258257 Query: 645 ttcaagggcatcgtcccgacaatgggccgtgagatccccggcaacgccataatgttcggt 704 ||||||||| | ||||| ||||||||||| ||| | || ||||| ||| | ||||| ||| Sbjct: 22258256 ttcaagggccttgtccctacaatgggccgcgaggttcctggcaatgccgtgatgtttggt 22258197 Query: 705 gtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtcaggcctcggccag 764 ||||| || | | |||||||||| | ||||| || | |||||| ||| ||||||| | Sbjct: 22258196 gtgtatgaaggcaccaagcagtacctcgccggtggtcaggacacatcaaacctcggcagg 22258137 Query: 765 ggctctctcatcctcgccggggggctcgccggaggggcgctgtggctcacggtgtacccg 824 |||||||||||||| |||| || || || || | || | | |||||| |||| ||||| Sbjct: 22258136 ggctctctcatcctatccggaggccttgctggggcggtgttctggctctcggtttaccct 22258077 Query: 825 accgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccgaggtactccggg 884 ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 22258076 accgacgtcgtgaagagcgtgattcaggtggatgactacaagaagccaaggtactcaggg 22258017 Query: 885 tcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcctgtacaagggg 944 || ||||||| || ||||||| |||||||||| || || |||||| ||||||||||| Sbjct: 22258016 tcagtcgacgctttcaagaagattctcgcggccgatggagtgaagggcttgtacaagggg 22257957 Query: 945 ttcggccccgccatggcccgcagcgtcccggcaaatgc 982 || || || |||||||| || || |||||||| ||||| Sbjct: 22257956 tttggacctgccatggctcgtagtgtcccggccaatgc 22257919 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Minus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 22255349 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 22255290 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 22255289 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 22255230 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 22255229 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 22255170 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 22255169 tggcctacgaggtcac 22255154 Score = 117 bits (59), Expect = 1e-22 Identities = 263/331 (79%) Strand = Plus / Minus Query: 201 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 260 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 22259914 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 22259855 Query: 261 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 320 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 22259854 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 22259795 Query: 321 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 380 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 22259794 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 22259735 Query: 381 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 440 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 22259734 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 22259675 Query: 441 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 500 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 22259674 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 22259615 Query: 501 gcatgcccaacagagctgattaagtgcaggt 531 || |||||||| ||||| || |||||||||| Sbjct: 22259614 gcttgcccaactgagctcatcaagtgcaggt 22259584 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Minus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 22256762 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 22256703 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 22256702 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 22256643 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 22256642 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 22256583 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 22256582 ctcttcaccgtcaggggccagatggaggc 22256554 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 22255467 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 22255412
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 226 bits (114), Expect = 2e-55 Identities = 372/458 (81%) Strand = Plus / Minus Query: 525 tgcaggttgcaggcccagagctctttagctgaagcaggtgctgtctccggcgtggcgctt 584 |||||||||||||||||||| ||||||| || |||| ||||| || ||||| || || Sbjct: 75619 tgcaggttgcaggcccagagtgctttagccgaggcagctgctgcttctggcgtagcccta 75560 Query: 585 cccaaagggccaatggatgtggcaaggcatgtcataagggacgccggcctcaaaggactg 644 |||||||| ||||| |||||||||| ||| ||| | ||||| |||||| | || || || Sbjct: 75559 cccaaaggaccaattgatgtggcaaagcacgtcgtcagggaagccggcatgaagggtttg 75500 Query: 645 ttcaagggcatcgtcccgacaatgggccgtgagatccccggcaacgccataatgttcggt 704 ||||||||| | ||||| ||||||||||| ||| | || ||||| ||| | ||||| ||| Sbjct: 75499 ttcaagggccttgtccctacaatgggccgcgaggttcctggcaatgccgtgatgtttggt 75440 Query: 705 gtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtcaggcctcggccag 764 ||||| || | | |||||||||| | ||||| || | |||||| ||| ||||||| | Sbjct: 75439 gtgtatgaaggcaccaagcagtacctcgccggtggtcaggacacatcaaacctcggcagg 75380 Query: 765 ggctctctcatcctcgccggggggctcgccggaggggcgctgtggctcacggtgtacccg 824 |||||||||||||| |||| || || || || | || | | |||||| |||| ||||| Sbjct: 75379 ggctctctcatcctatccggaggccttgctggggcggtgttctggctctcggtttaccct 75320 Query: 825 accgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccgaggtactccggg 884 ||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 75319 accgacgtcgtgaagagcgtgattcaggtggatgactacaagaagccaaggtactcaggg 75260 Query: 885 tcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcctgtacaagggg 944 || ||||||| || ||||||| |||||||||| || || |||||| ||||||||||| Sbjct: 75259 tcagtcgacgctttcaagaagattctcgcggccgatggagtgaagggcttgtacaagggg 75200 Query: 945 ttcggccccgccatggcccgcagcgtcccggcaaatgc 982 || || || |||||||| || || |||||||| ||||| Sbjct: 75199 tttggacctgccatggctcgtagtgtcccggccaatgc 75162 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Minus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 72592 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 72533 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 72532 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 72473 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 72472 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 72413 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 72412 tggcctacgaggtcac 72397 Score = 117 bits (59), Expect = 1e-22 Identities = 263/331 (79%) Strand = Plus / Minus Query: 201 ggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggc 260 |||||||| || |||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct: 77157 ggccaccccttcgacaccatcaaggtcaagctccagagccagcccacccctgcccccggc 77098 Query: 261 cagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaaggg 320 || | || ||||| || |||||| | || || |||||||| || | || | || || Sbjct: 77097 caattccccaagtacgccggcgccgtcgacgccgtcaagcagaccatcgccaccgagggc 77038 Query: 321 ccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgct 380 || ||||| | || ||||| ||||| || || ||||| |||||||| ||||||||||| Sbjct: 77037 cccaggggcctctacaaggggatgggtgcgccgctcgccaccgtcgccgccttcaacgcc 76978 Query: 381 ctcctgttcactgtgaggggccaaatggaggctctcttgagatcggagcctggggtgcca 440 ||||| ||||| || |||||||| |||||||| || || | || ||||| || ||| Sbjct: 76977 ctcctcttcaccgtcaggggccagatggaggccctgctgcgctccgagcccggccagcct 76918 Query: 441 ttgacagttaagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctg 500 | || || || |||||||| ||||| ||||| ||||| || |||| ||||||||||| Sbjct: 76917 ctcacggtcaaccagcaggtcgtcgccggtgcgggtgctggtgttgccgtctccttcctc 76858 Query: 501 gcatgcccaacagagctgattaagtgcaggt 531 || |||||||| ||||| || |||||||||| Sbjct: 76857 gcttgcccaactgagctcatcaagtgcaggt 76827 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Minus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 74005 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 73946 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 73945 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 73886 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 73885 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 73826 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 73825 ctcttcaccgtcaggggccagatggaggc 73797 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 72710 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 72655
>emb|CT834382.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA058P20, full insert sequence Length = 1189 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 815 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 874 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 875 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 934 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 935 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 994 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 995 tggcctacgaggtcac 1010 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 139 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 198 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 199 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 258 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 259 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 318 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 319 ctcttcaccgtcaggggccagatggaggc 347 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 697 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 752 Score = 50.1 bits (25), Expect = 0.020 Identities = 49/57 (85%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 424 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 480
>emb|CT834381.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA025N22, full insert sequence Length = 1514 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 1140 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 1199 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 1200 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 1259 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 1260 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 1319 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 1320 tggcctacgaggtcac 1335 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 464 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 523 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 524 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 583 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 584 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 643 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 644 ctcttcaccgtcaggggccagatggaggc 672 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 1022 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 1077 Score = 50.1 bits (25), Expect = 0.020 Identities = 49/57 (85%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 749 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 805
>ref|NM_001072003.1| Oryza sativa (japonica cultivar-group) Os10g0573700 (Os10g0573700) mRNA, complete cds Length = 1229 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 859 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 918 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 919 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 978 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 979 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 1038 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 1039 tggcctacgaggtcac 1054 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 189 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 248 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 249 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 308 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 309 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 368 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 369 ctcttcaccgtcaggggccagatggaggc 397 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 741 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 796 Score = 50.1 bits (25), Expect = 0.020 Identities = 49/57 (85%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 474 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 530
>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full insert sequence Length = 1209 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 841 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 900 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 901 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 960 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 961 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 1020 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 1021 tggcctacgaggtcac 1036 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 171 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 230 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 231 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 290 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 291 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 350 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 351 ctcttcaccgtcaggggccagatggaggc 379 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 723 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 778 Score = 50.1 bits (25), Expect = 0.020 Identities = 49/57 (85%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 456 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 512
>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full insert sequence Length = 1230 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 860 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 919 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 920 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 979 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 980 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 1039 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 1040 tggcctacgaggtcac 1055 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 190 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 249 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 250 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 309 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 310 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 369 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 370 ctcttcaccgtcaggggccagatggaggc 398 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 742 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 797 Score = 50.1 bits (25), Expect = 0.020 Identities = 49/57 (85%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| |||||||| || || || ||||| || |||||||||||||| ||||||||| Sbjct: 475 gtctcgttcctggcctgtcccactgagctcatcaagtgcaggttgcaagcccagagc 531
>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full insert sequence Length = 1230 Score = 159 bits (80), Expect = 3e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 814 cggtgtacccgaccgacgtcgtcaagagcgtgatccaggtggacgactacaagaagccga 873 ||||||||||||| ||||| || |||||||| ||||||||||||||||||||||| || | Sbjct: 860 cggtgtacccgacggacgtggtgaagagcgtcatccaggtggacgactacaagaacccca 919 Query: 874 ggtactccgggtcgatcgacgcggtccagaagatcgtcgcggccgacggggtcaagggcc 933 ||||||||| || || ||||| || ||||||| |||| |||||||| |||||||||| Sbjct: 920 agtactccggctccatggacgccttcaggaagatcctcgccgccgacggcgtcaagggcc 979 Query: 934 tgtacaaggggttcggccccgccatggcccgcagcgtcccggcaaatgccgccaccttcg 993 | |||||||| |||||||| |||||||| ||||| ||||| || || |||||| |||| Sbjct: 980 tctacaagggcttcggcccggccatggcgcgcagtgtccccgccaacgccgcctgcttct 1039 Query: 994 tggcctacgagatcac 1009 ||||||||||| |||| Sbjct: 1040 tggcctacgaggtcac 1055 Score = 89.7 bits (45), Expect = 2e-14 Identities = 168/209 (80%) Strand = Plus / Plus Query: 204 cacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctccaggccag 263 ||||| || |||||||||||||| ||||| ||||||||||| | || | || || ||| Sbjct: 190 caccccttcgacaccatcaaggtgaagctgcagagccagccgacgccgccgccggggcag 249 Query: 264 ctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaagggccg 323 | || |||| || |||||| | || || |||||||| || | ||||| || |||||| Sbjct: 250 ccgcccaagttcgccggcgccatggacgccgtcaagcagacgctggcggccgaggggccg 309 Query: 324 aggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaacgctctc 383 ||||| |||| ||||| |||||||| || ||||| |||||||| ||||||||||| ||| Sbjct: 310 aggggcctgtacaaggggatgggggcgccgctcgccaccgtcgccgccttcaacgccctc 369 Query: 384 ctgttcactgtgaggggccaaatggaggc 412 || ||||| || |||||||| |||||||| Sbjct: 370 ctcttcaccgtcaggggccagatggaggc 398 Score = 58.0 bits (29), Expect = 8e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 489 gtctccttcctggcatgcccaacagagctgattaagtgcaggttgcaggcccagagc 545 ||||| ||||||||||| || || ||||| || |||||||||||||| ||||||||| Sbjct: 475 gtctcgttcctggcatgtcccactgagctcatcaagtgcaggttgcaagcccagagc 531 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 696 atgttcggtgtgtacgaggccgtcaagcagtacatggccggcggccgggacacgtc 751 |||||||| ||||||||||| ||||||||||| | |||||||| | ||||||||| Sbjct: 742 atgttcggcgtgtacgaggcgatcaagcagtacctcgccggcgggcaggacacgtc 797
>dbj|AP004577.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10N22, TM0381, complete sequence Length = 80655 Score = 85.7 bits (43), Expect = 4e-13 Identities = 172/215 (80%) Strand = Plus / Minus Query: 198 gttggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctcca 257 ||||| |||||||||||||| ||||||||||||||||| |||||||| | || ||| Sbjct: 37883 gttggacacccatttgacacaatcaaggtcaagctccaaagccagcctacaccaatccca 37824 Query: 258 ggccagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaa 317 |||||||| || | ||| | || || |||||||||||||||| ||| | || ||||| Sbjct: 37823 ggccagcttcccagatattctggtgcaattgatgctgtcaagcagacactagcagctgag 37764 Query: 318 gggccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaac 377 || || ||||| || || || || ||||| ||||| || ||||| || || ||||| ||| Sbjct: 37763 ggcccaaggggtttatacaaaggtatgggtgctccacttgctacagtagccgccttaaac 37704 Query: 378 gctctcctgttcactgtgaggggccaaatggaggc 412 ||| ||||||| || || ||||| ||||||||||| Sbjct: 37703 gctgtcctgtttacggttagggggcaaatggaggc 37669 Score = 77.8 bits (39), Expect = 9e-11 Identities = 171/215 (79%) Strand = Plus / Minus Query: 198 gttggccacccatttgacaccatcaaggtcaagctccagagccagcccagccctgctcca 257 ||||| |||||||||||||| ||||||||||||||||| |||||||| | || || Sbjct: 31430 gttggacacccatttgacacaatcaaggtcaagctccaaagccagccaacaccaatccct 31371 Query: 258 ggccagctacctaagtatgcgggcgcctttgatgctgtcaagcaaacagttgcggctgaa 317 |||||||| || | |||| | || || |||||||||||||||| ||| | || |||||| Sbjct: 31370 ggccagcttccaaggtattctggtgcaattgatgctgtcaagcagacactagcagctgaa 31311 Query: 318 gggccgaggggattgtataagggaatgggggctcctctcgctaccgtcgcagccttcaac 377 || || ||||| || || || || | ||| ||||| || ||||| || || ||||||||| Sbjct: 31310 ggcccaaggggcttatacaaaggtaggggtgctccacttgctacagtagccgccttcaac 31251 Query: 378 gctctcctgttcactgtgaggggccaaatggaggc 412 ||| ||| || || || ||||| ||||||||||| Sbjct: 31250 gctgccctatttacggttagggggcaaatggaggc 31216
>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182, complete sequence Length = 80583 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 198 gttggccacccatttgacaccatcaaggtcaagctccagagccagcc 244 ||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 78518 gttggacacccctttgacaccatcaaggtcaagctccaaagccagcc 78472 Score = 65.9 bits (33), Expect = 3e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 285 tttgatgctgtcaagcaaacagttgcggctgaagggccgaggggattgtataagggaatg 344 |||||||| |||||||| ||| | || |||||||| |||||||| || | || || ||| Sbjct: 78431 tttgatgccgtcaagcagacaatagcagctgaaggtccgaggggtttattcaaaggtatg 78372 Query: 345 ggggctcctctcgctaccgtcgcagccttcaacgctctcctgttcactgtgaggggccaa 404 || || || || ||||| || ||||||||||| ||| ||||||| || |||||||| ||| Sbjct: 78371 ggtgccccgcttgctacggtagcagccttcaatgctgtcctgtttacagtgaggggacaa 78312 Query: 405 atgga 409 ||||| Sbjct: 78311 atgga 78307
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 450 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 509 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 14997735 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 14997794 Query: 510 acagagctgattaagtgcaggt 531 || ||||| || ||||| |||| Sbjct: 14997795 actgagctcatcaagtgtaggt 14997816
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 450 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 509 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 3639 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 3698 Query: 510 acagagctgattaagtgcaggt 531 || ||||| || ||||| |||| Sbjct: 3699 actgagctcatcaagtgtaggt 3720
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 450 aagcagcaggttgtcgctggtgctggtgccgggcttgcggtctccttcctggcatgccca 509 |||||| |||||||||| ||||| ||||| || |||| ||||||||||| || |||||| Sbjct: 137905 aagcagtaggttgtcgccggtgccggtgctggtgttgccgtctccttcctagcttgccca 137964 Query: 510 acagagctgattaagtgcaggt 531 || ||||| || ||||| |||| Sbjct: 137965 actgagctcatcaagtgtaggt 137986
>ref|NM_124051.3| Arabidopsis thaliana BOU (A BOUT DE SOUFFLE); binding / transporter (BOU) mRNA, complete cds Length = 1323 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 330 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 376
>gb|BT011849.1| Arabidopsis thaliana At5g46800 mRNA sequence Length = 900 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 55 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 101
>gb|AY136374.2| Arabidopsis thaliana carnitine/acylcarnitine translocase-like protein (At5g46800) mRNA, complete cds Length = 1255 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 314 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 360
>gb|BT000165.1| Arabidopsis thaliana carnitine/acylcarnitine translocase-like protein (At5g46800) mRNA, complete cds Length = 967 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 58 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 104
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Minus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 71728 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 71682
>emb|BX829608.1|CNS0A1F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZD09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1281 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 336 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 382
>emb|BX830676.1|CNS0A0SP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1255 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 306 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 352
>emb|BX830863.1|CNS0A0US Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1274 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 315 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 361
>emb|AJ277732.1|ATH277732 Arabidopsis thaliana mRNA for carnitine acyl carrier-like protein (bou gene) Length = 1149 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||||||||| || |||||||| Sbjct: 206 gttgttggtcatccatttgacactatcaaggtcaaacttcagagcca 252
>gb|AY088995.1| Arabidopsis thaliana clone 13730 mRNA, complete sequence Length = 1146 Score = 46.1 bits (23), Expect = 0.31 Identities = 41/47 (87%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct: 152 gttgttggtcatccatttgacacaatcaaagtcaaacttcagagcca 198
>dbj|AK107685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-B03, full insert sequence Length = 1521 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 938 caaggggttcggccccgccatggcccg 964 |||||| |||||||||||||||||||| Sbjct: 1282 caagggcttcggccccgccatggcccg 1308
>emb|BX831435.1|CNS0A0QE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1260 Score = 46.1 bits (23), Expect = 0.31 Identities = 41/47 (87%) Strand = Plus / Plus Query: 195 gttgttggccacccatttgacaccatcaaggtcaagctccagagcca 241 |||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 311 gttgttggtcatccatttgagactatcaaggtcaaacttcagagcca 357
>gb|AC124408.4| Mus musculus BAC clone RP24-262E22 from chromosome 14, complete sequence Length = 159082 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1121 ggcagacaaaagaaaggaaaaa 1142 |||||||||||||||||||||| Sbjct: 104559 ggcagacaaaagaaaggaaaaa 104580
>emb|CT009489.6| Mouse DNA sequence from clone RP23-97F8 on chromosome 14, complete sequence Length = 150382 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1121 ggcagacaaaagaaaggaaaaa 1142 |||||||||||||||||||||| Sbjct: 4926 ggcagacaaaagaaaggaaaaa 4947
>emb|BX664739.3| Human DNA sequence from clone WI2-89031B12 on chromosome X Contains the FAM3A gene for family with sequence similarity, the SLC10A3 3 gene for solute carrier family 10 (sodium/bile acid cotransporter family) member 3, the UBL4 gene for ubiquitin-like 4 and three CpG islands, complete sequence Length = 41279 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1121 ggcagacaaaagaaaggaaaaattaa 1146 |||||||| ||||||||||||||||| Sbjct: 17695 ggcagacataagaaaggaaaaattaa 17720
>gb|AC145688.4| Pan troglodytes BAC clone CH251-346A10 from chromosome x, complete sequence Length = 174819 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1121 ggcagacaaaagaaaggaaaaattaa 1146 |||||||| ||||||||||||||||| Sbjct: 23163 ggcagacataagaaaggaaaaattaa 23188
>gb|L44140.1|HUMFLNG6PD Homo sapiens chromosome X region from filamin (FLN) gene to glucose-6-phosphate dehydrogenase (G6PD) gene, complete cds's Length = 219447 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1121 ggcagacaaaagaaaggaaaaattaa 1146 |||||||| ||||||||||||||||| Sbjct: 167959 ggcagacataagaaaggaaaaattaa 167984
>emb|X55448.1|HSG6PDGEN H.sapiens G6PD gene for glucose-6-phosphate dehydrogenase Length = 52173 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1121 ggcagacaaaagaaaggaaaaattaa 1146 |||||||| ||||||||||||||||| Sbjct: 51489 ggcagacataagaaaggaaaaattaa 51464
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 gcagcaggttgtcgctggtgctggt 476 |||||| |||||||||||||||||| Sbjct: 3842137 gcagcatgttgtcgctggtgctggt 3842161
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 gccttcaacgctctcctgttcactg 393 |||||| |||||||||||||||||| Sbjct: 476117 gccttcgacgctctcctgttcactg 476141
>emb|CT757481.6| Pig DNA sequence from clone CH242-210D24 on chromosome 7, complete sequence Length = 185790 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 cccagccctgctccaggccag 263 ||||||||||||||||||||| Sbjct: 113244 cccagccctgctccaggccag 113224
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 4.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 887 gatcgacgcggtccagaagatcgtcgcggccga 919 |||||||||||||| | ||||||||||||||| Sbjct: 7628087 gatcgacgcggtcccgctgatcgtcgcggccga 7628119
>ref|XM_001062077.1| PREDICTED: Rattus norvegicus similar to spindlin (LOC682571), mRNA Length = 4529 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 ttgatgctgtcaagcaaacag 306 ||||||||||||||||||||| Sbjct: 2618 ttgatgctgtcaagcaaacag 2638
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 ccccctcccactcctcacccacggc 66 |||||||||||||||||||| |||| Sbjct: 8136373 ccccctcccactcctcacccgcggc 8136397
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1124 agacaaaagaaaggaaaaatt 1144 ||||||||||||||||||||| Sbjct: 74697 agacaaaagaaaggaaaaatt 74677
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 ttgacaccatcaaggtcaagctcca 235 ||||||||||||||| ||||||||| Sbjct: 151217 ttgacaccatcaaggacaagctcca 151193
>ref|XM_659189.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6677.2), mRNA Length = 606 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 atttgacaccatcaaggtcaagctc 233 ||||||||||||||||||| ||||| Sbjct: 556 atttgacaccatcaaggtctagctc 532
>gb|BT012718.1| Lycopersicon esculentum clone 113606F, mRNA sequence Length = 1661 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 tcaaaggactgttcaagggca 654 ||||||||||||||||||||| Sbjct: 526 tcaaaggactgttcaagggca 546
>gb|AC146691.5| Macaca mulatta clone ch250-214a10, complete sequence Length = 152056 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1121 ggcagacaaaagaaaggaaaa 1141 ||||||||||||||||||||| Sbjct: 10298 ggcagacaaaagaaaggaaaa 10278
>gb|AC016946.15| Homo sapiens 3 BAC RP11-268F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161123 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 795 ggaggggcgctgtggctcacg 815 ||||||||||||||||||||| Sbjct: 59235 ggaggggcgctgtggctcacg 59215
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1129 aaagaaaggaaaaattaaccattct 1153 ||||||||||||||||| ||||||| Sbjct: 2710 aaagaaaggaaaaattatccattct 2734
>gb|AE005983.1| Caulobacter crescentus CB15 section 309 of 359 of the complete genome Length = 13041 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 tgtcgctggtgctggtgccgg 481 ||||||||||||||||||||| Sbjct: 11742 tgtcgctggtgctggtgccgg 11762
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161668 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 gccttcaacgctctcctgttcactg 393 |||||| |||||||||||||||||| Sbjct: 67858 gccttcgacgctctcctgttcactg 67882
>gb|AC106718.4| Homo sapiens 3 BAC RP11-30H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132695 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 795 ggaggggcgctgtggctcacg 815 ||||||||||||||||||||| Sbjct: 6771 ggaggggcgctgtggctcacg 6791
>gb|AC097014.2| Homo sapiens chromosome 3 clone RP11-29M1, complete sequence Length = 143671 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1129 aaagaaaggaaaaattaaccattct 1153 ||||||||||||||||| ||||||| Sbjct: 10429 aaagaaaggaaaaattatccattct 10405
>emb|AL031316.2|HS28O10 Human DNA sequence from clone RP1-28O10 on chromosome 1q32.2-41 Contains the 5'end of the LAMB3 gene for laminin beta 3, the 3' end of a novel gene, the gene for putative lymphocyte G0/G1 switch gene (G0S2) and the 5' end of the HSD11B1 gene for hydroxysteroid (11-beta) dehydrogenase 1, complete sequence Length = 97700 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1094 agcaactgagacagaattggg 1114 ||||||||||||||||||||| Sbjct: 23906 agcaactgagacagaattggg 23926
>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18, complete sequence Length = 130348 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1122 gcagacaaaagaaaggaaaaa 1142 ||||||||||||||||||||| Sbjct: 51826 gcagacaaaagaaaggaaaaa 51846
>emb|AL031883.1|DMC11F6 Drosophila melanogaster cosmid clone 11F6 Length = 36000 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 gccttcaacgctctcctgttcactg 393 |||||| |||||||||||||||||| Sbjct: 20319 gccttcgacgctctcctgttcactg 20343
>emb|BX914216.14| Zebrafish DNA sequence from clone RP71-25N17 in linkage group 18, complete sequence Length = 72914 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1122 gcagacaaaagaaaggaaaaa 1142 ||||||||||||||||||||| Sbjct: 28873 gcagacaaaagaaaggaaaaa 28853
>gb|AC025572.13|AC025572 Homo sapiens 3 BAC RP11-58O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191510 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1129 aaagaaaggaaaaattaaccattct 1153 ||||||||||||||||| ||||||| Sbjct: 55833 aaagaaaggaaaaattatccattct 55809
>ref|XM_571305.1| Cryptococcus neoformans var. neoformans JEC21 UMP-CMP kinase (CNF00400) partial mRNA Length = 932 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 ttgacaccatcaaggtcaagctcca 235 ||||||||||||||| ||||||||| Sbjct: 38 ttgacaccatcaaggacaagctcca 62
>gb|AC149294.8| Mus musculus chromosome 15, clone RP24-389G21, complete sequence Length = 136530 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 ctcctcccccctcccactcctcacc 60 ||||||||||||||| ||||||||| Sbjct: 112260 ctcctcccccctcccgctcctcacc 112284
>gb|DQ294266.1| Solanum tuberosum clone 133C01 mitochondrial carrier-like protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 1577 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 tcaaaggactgttcaagggca 654 ||||||||||||||||||||| Sbjct: 518 tcaaaggactgttcaagggca 538 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 189,433,427 Number of extensions: 9906706 Number of successful extensions: 225634 Number of sequences better than 10.0: 58 Number of HSP's gapped: 225634 Number of HSP's successfully gapped: 108 Length of query: 1258 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1235 Effective length of database: 18,503,978,556 Effective search space: 22852413516660 Effective search space used: 22852413516660 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)